Guide to the Human Genome
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Name: C21orf7 Sequence: fasta or formatted (242aa) NCBI GI: 9910146
Description:

chromosome 21 open reading frame 7

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         18           2
 C cysteine            2.5          6           1
 D aspartate           5.0         12           2
 E glutamate          11.6         28           2
 F phenylalanine       2.5          6           1
 G glycine             2.9          7           2
 H histidine           2.1          5           1
 I isoleucine          4.1         10           1
 K lysine              6.6         16           2
 L leucine            13.6         33           2
 M methionine          2.9          7           1
 N asparagine          1.2          3           1
 P proline             7.4         18           2
 Q glutamine           6.2         15           2
 R arginine            3.7          9           2
 S serine              8.7         21           3
 T threonine           3.3          8           1
 V valine              5.4         13           1
 W tryptophan          0.8          2           1
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 21 open reading frame 7 
MAP3K7                0.223   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.223   mitogen-activated protein kinase kinase kinase 7 isof...
CYTSA                 0.026   cytospin A 
CYTSA                 0.026   cytospin A 
LEKR1                 0.026   leucine, glutamate and lysine rich 1 
KIAA0947              0.026   hypothetical protein LOC23379 
MAP1A                 0.026   microtubule-associated protein 1A 
C14orf178             0.026   hypothetical protein LOC283579 
GOLGA6D               0.026   golgi autoantigen, golgin subfamily a, 6D 
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGA6C               0.026   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
PPFIBP1               0.026   PTPRF interacting protein binding protein 1 isoform ...
CCDC155               0.026   coiled-coil domain containing 155 
SFPQ                  0.026   splicing factor proline/glutamine rich (polypyrimidin...
GOLGA6                0.026   golgi autoantigen, golgin subfamily a, 6 
PLCB1                 0.024   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.024   phosphoinositide-specific phospholipase C beta 1 iso...
LOC400352             0.024   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.024   PREDICTED: similar to Putative golgin subfamily A m...
MSN                   0.024   moesin 
KIF16B                0.024   kinesin-like motor protein C20orf23 
LOC283685             0.022   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH2                  0.022   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.022   myosin, heavy chain 2, skeletal muscle, adult [Homo...
TTN                   0.022   titin isoform N2-A 
GOLGA6B               0.022   golgi autoantigen, golgin subfamily a, 6B 
CCDC88C               0.022   DVL-binding protein DAPLE 
MYH4                  0.022   myosin, heavy polypeptide 4, skeletal muscle 
LOC653061             0.022   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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