Guide to the Human Genome
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Name: CSNK1G1 Sequence: fasta or formatted (422aa) NCBI GI: 98986450
Description:

casein kinase 1, gamma 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         22           1
 C cysteine            1.9          8           3
 D aspartate           5.0         21           2
 E glutamate           7.3         31           2
 F phenylalanine       4.3         18           2
 G glycine             6.9         29           1
 H histidine           3.8         16           1
 I isoleucine          4.3         18           2
 K lysine              7.6         32           2
 L leucine             9.0         38           2
 M methionine          2.4         10           1
 N asparagine          3.6         15           1
 P proline             5.5         23           1
 Q glutamine           3.6         15           3
 R arginine            7.6         32           2
 S serine              6.2         26           5
 T threonine           5.7         24           2
 V valine              5.0         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            5.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase 1, gamma 1 
CSNK1G3               0.798   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.787   casein kinase 1, gamma 3 isoform 2 
CSNK1G2               0.781   casein kinase 1, gamma 2 
CSNK1G3               0.780   casein kinase 1, gamma 3 isoform 1 
CSNK1G3               0.769   casein kinase 1, gamma 3 isoform 4 
CSNK1E                0.402   casein kinase 1 epsilon 
CSNK1E                0.402   casein kinase 1 epsilon 
CSNK1D                0.395   casein kinase 1, delta isoform 2 
CSNK1D                0.395   casein kinase 1, delta isoform 1 
CSNK1A1               0.363   casein kinase 1, alpha 1 isoform 2 
CSNK1A1               0.351   casein kinase 1, alpha 1 isoform 1 
CSNK1A1L              0.348   casein kinase 1, alpha 1-like 
TTBK1                 0.163   tau tubulin kinase 1 
TTBK2                 0.151   tau tubulin kinase 2 
VRK1                  0.112   vaccinia related kinase 1 
VRK2                  0.085   vaccinia related kinase 2 isoform 3 
VRK2                  0.085   vaccinia related kinase 2 isoform 2 
VRK2                  0.085   vaccinia related kinase 2 isoform 1 
VRK2                  0.085   vaccinia related kinase 2 isoform 1 
VRK2                  0.085   vaccinia related kinase 2 isoform 1 
VRK2                  0.075   vaccinia related kinase 2 isoform 6 
VRK3                  0.072   vaccinia related kinase 3 isoform 2 
VRK3                  0.072   vaccinia related kinase 3 isoform 1 
PDPK1                 0.056   3-phosphoinositide dependent protein kinase-1 isoform...
LOC100293250          0.056   PREDICTED: similar to 3-phosphoinositide dependent ...
LOC100287510          0.056   PREDICTED: hypothetical protein XP_002343452 
PRKX                  0.053   protein kinase, X-linked 
AURKA                 0.051   serine/threonine protein kinase 6 
AURKA                 0.051   serine/threonine protein kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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