Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CSNK1D Sequence: fasta or formatted (415aa) NCBI GI: 20149530
Description:

casein kinase 1, delta isoform 1

Referenced in:

Circadian Rhythms
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [409aa] casein kinase 1, delta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         22           2
 C cysteine            1.2          5           1
 D aspartate           5.1         21           2
 E glutamate           5.5         23           2
 F phenylalanine       3.9         16           1
 G glycine             8.0         33           2
 H histidine           2.9         12           1
 I isoleucine          5.1         21           2
 K lysine              5.8         24           2
 L leucine             9.4         39           3
 M methionine          3.1         13           2
 N asparagine          3.9         16           1
 P proline             4.6         19           2
 Q glutamine           3.1         13           1
 R arginine            9.9         41           2
 S serine              8.4         35           3
 T threonine           5.3         22           1
 V valine              4.6         19           2
 W tryptophan          0.7          3           1
 Y tyrosine            4.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase 1, delta isoform 1 
CSNK1D                0.963   casein kinase 1, delta isoform 2 
CSNK1E                0.824   casein kinase 1 epsilon 
CSNK1E                0.824   casein kinase 1 epsilon 
CSNK1A1               0.550   casein kinase 1, alpha 1 isoform 2 
CSNK1A1               0.532   casein kinase 1, alpha 1 isoform 1 
CSNK1A1L              0.528   casein kinase 1, alpha 1-like 
CSNK1G3               0.413   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.413   casein kinase 1, gamma 3 isoform 2 
CSNK1G3               0.411   casein kinase 1, gamma 3 isoform 4 
CSNK1G3               0.411   casein kinase 1, gamma 3 isoform 1 
CSNK1G2               0.409   casein kinase 1, gamma 2 
CSNK1G1               0.409   casein kinase 1, gamma 1 
TTBK1                 0.190   tau tubulin kinase 1 
TTBK2                 0.176   tau tubulin kinase 2 
VRK1                  0.132   vaccinia related kinase 1 
VRK2                  0.119   vaccinia related kinase 2 isoform 3 
VRK2                  0.119   vaccinia related kinase 2 isoform 2 
VRK2                  0.119   vaccinia related kinase 2 isoform 1 
VRK2                  0.119   vaccinia related kinase 2 isoform 1 
VRK2                  0.119   vaccinia related kinase 2 isoform 1 
VRK2                  0.098   vaccinia related kinase 2 isoform 6 
VRK3                  0.064   vaccinia related kinase 3 isoform 2 
VRK3                  0.064   vaccinia related kinase 3 isoform 1 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press