Guide to the Human Genome
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Name: CSNK1D Sequence: fasta or formatted (409aa) NCBI GI: 20544145
Description:

casein kinase 1, delta isoform 2

Referenced in:

Circadian Rhythms
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [415aa] casein kinase 1, delta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         21           2
 C cysteine            1.2          5           1
 D aspartate           5.1         21           2
 E glutamate           5.9         24           2
 F phenylalanine       4.2         17           1
 G glycine             7.8         32           2
 H histidine           3.2         13           2
 I isoleucine          5.1         21           2
 K lysine              6.1         25           2
 L leucine             9.3         38           3
 M methionine          3.2         13           2
 N asparagine          4.2         17           1
 P proline             4.6         19           2
 Q glutamine           2.9         12           1
 R arginine            9.5         39           2
 S serine              8.1         33           3
 T threonine           5.4         22           1
 V valine              3.9         16           1
 W tryptophan          0.7          3           1
 Y tyrosine            4.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase 1, delta isoform 2 
CSNK1D                0.972   casein kinase 1, delta isoform 1 
CSNK1E                0.849   casein kinase 1 epsilon 
CSNK1E                0.849   casein kinase 1 epsilon 
CSNK1A1               0.555   casein kinase 1, alpha 1 isoform 2 
CSNK1A1               0.536   casein kinase 1, alpha 1 isoform 1 
CSNK1A1L              0.533   casein kinase 1, alpha 1-like 
CSNK1G3               0.417   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.417   casein kinase 1, gamma 3 isoform 2 
CSNK1G3               0.414   casein kinase 1, gamma 3 isoform 4 
CSNK1G3               0.414   casein kinase 1, gamma 3 isoform 1 
CSNK1G2               0.413   casein kinase 1, gamma 2 
CSNK1G1               0.413   casein kinase 1, gamma 1 
TTBK1                 0.192   tau tubulin kinase 1 
TTBK2                 0.178   tau tubulin kinase 2 
VRK1                  0.133   vaccinia related kinase 1 
VRK2                  0.120   vaccinia related kinase 2 isoform 3 
VRK2                  0.120   vaccinia related kinase 2 isoform 2 
VRK2                  0.120   vaccinia related kinase 2 isoform 1 
VRK2                  0.120   vaccinia related kinase 2 isoform 1 
VRK2                  0.120   vaccinia related kinase 2 isoform 1 
VRK2                  0.099   vaccinia related kinase 2 isoform 6 
VRK3                  0.064   vaccinia related kinase 3 isoform 2 
VRK3                  0.064   vaccinia related kinase 3 isoform 1 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
AURKA                 0.054   serine/threonine protein kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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