Guide to the Human Genome
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Name: CSNK1A1L Sequence: fasta or formatted (337aa) NCBI GI: 21624639
Description:

casein kinase 1, alpha 1-like

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         14           2
 C cysteine            1.2          4           1
 D aspartate           4.7         16           2
 E glutamate           5.3         18           2
 F phenylalanine       4.7         16           1
 G glycine             7.4         25           2
 H histidine           3.0         10           1
 I isoleucine          4.2         14           1
 K lysine              8.9         30           2
 L leucine             9.8         33           2
 M methionine          4.2         14           1
 N asparagine          5.3         18           2
 P proline             2.7          9           1
 Q glutamine           5.9         20           2
 R arginine            5.6         19           2
 S serine              5.3         18           3
 T threonine           5.9         20           3
 V valine              5.3         18           2
 W tryptophan          0.9          3           1
 Y tyrosine            5.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase 1, alpha 1-like 
CSNK1A1               0.916   casein kinase 1, alpha 1 isoform 2 
CSNK1A1               0.893   casein kinase 1, alpha 1 isoform 1 
CSNK1E                0.648   casein kinase 1 epsilon 
CSNK1E                0.648   casein kinase 1 epsilon 
CSNK1D                0.648   casein kinase 1, delta isoform 2 
CSNK1D                0.648   casein kinase 1, delta isoform 1 
CSNK1G3               0.445   casein kinase 1, gamma 3 isoform 4 
CSNK1G3               0.445   casein kinase 1, gamma 3 isoform 1 
CSNK1G3               0.444   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.444   casein kinase 1, gamma 3 isoform 2 
CSNK1G1               0.442   casein kinase 1, gamma 1 
CSNK1G2               0.438   casein kinase 1, gamma 2 
TTBK1                 0.205   tau tubulin kinase 1 
TTBK2                 0.198   tau tubulin kinase 2 
VRK1                  0.129   vaccinia related kinase 1 
VRK2                  0.122   vaccinia related kinase 2 isoform 3 
VRK2                  0.122   vaccinia related kinase 2 isoform 2 
VRK2                  0.122   vaccinia related kinase 2 isoform 1 
VRK2                  0.122   vaccinia related kinase 2 isoform 1 
VRK2                  0.122   vaccinia related kinase 2 isoform 1 
VRK2                  0.098   vaccinia related kinase 2 isoform 6 
VRK3                  0.063   vaccinia related kinase 3 isoform 2 
VRK3                  0.063   vaccinia related kinase 3 isoform 1 
MELK                  0.060   maternal embryonic leucine zipper kinase 
CSNK2A2               0.060   casein kinase 2, alpha prime polypeptide 
PFTK2                 0.060   PFTAIRE protein kinase 2 
CRKRS                 0.060   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.060   Cdc2-related kinase, arginine/serine-rich isoform 1...
PRKD2                 0.057   protein kinase D2 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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