Guide to the Human Genome
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Name: CSNK1G3 Sequence: fasta or formatted (415aa) NCBI GI: 113462008
Description:

casein kinase 1, gamma 3 isoform 3

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [455aa] casein kinase 1, gamma 3 isoform 4
alt prot [447aa] casein kinase 1, gamma 3 isoform 1
alt prot [423aa] casein kinase 1, gamma 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         17           1
 C cysteine            1.7          7           3
 D aspartate           6.5         27           2
 E glutamate           6.0         25           1
 F phenylalanine       4.3         18           2
 G glycine             7.5         31           1
 H histidine           2.7         11           1
 I isoleucine          4.6         19           2
 K lysine              8.7         36           3
 L leucine             8.9         37           2
 M methionine          3.4         14           1
 N asparagine          4.1         17           1
 P proline             5.1         21           1
 Q glutamine           4.1         17           2
 R arginine            7.5         31           2
 S serine              5.5         23           4
 T threonine           5.5         23           1
 V valine              4.3         18           2
 W tryptophan          0.5          2           1
 Y tyrosine            5.1         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.989   casein kinase 1, gamma 3 isoform 2 
CSNK1G3               0.980   casein kinase 1, gamma 3 isoform 1 
CSNK1G3               0.969   casein kinase 1, gamma 3 isoform 4 
CSNK1G2               0.815   casein kinase 1, gamma 2 
CSNK1G1               0.811   casein kinase 1, gamma 1 
CSNK1E                0.413   casein kinase 1 epsilon 
CSNK1E                0.413   casein kinase 1 epsilon 
CSNK1D                0.406   casein kinase 1, delta isoform 2 
CSNK1D                0.406   casein kinase 1, delta isoform 1 
CSNK1A1               0.369   casein kinase 1, alpha 1 isoform 2 
CSNK1A1               0.359   casein kinase 1, alpha 1 isoform 1 
CSNK1A1L              0.355   casein kinase 1, alpha 1-like 
TTBK1                 0.155   tau tubulin kinase 1 
TTBK2                 0.148   tau tubulin kinase 2 
VRK1                  0.111   vaccinia related kinase 1 
VRK2                  0.094   vaccinia related kinase 2 isoform 3 
VRK2                  0.094   vaccinia related kinase 2 isoform 2 
VRK2                  0.094   vaccinia related kinase 2 isoform 1 
VRK2                  0.094   vaccinia related kinase 2 isoform 1 
VRK2                  0.094   vaccinia related kinase 2 isoform 1 
VRK2                  0.079   vaccinia related kinase 2 isoform 6 
VRK3                  0.069   vaccinia related kinase 3 isoform 2 
VRK3                  0.069   vaccinia related kinase 3 isoform 1 
PDPK1                 0.055   3-phosphoinositide dependent protein kinase-1 isoform...
LOC100293250          0.055   PREDICTED: similar to 3-phosphoinositide dependent ...
LOC100287510          0.055   PREDICTED: hypothetical protein XP_002343452 
AURKA                 0.053   serine/threonine protein kinase 6 
AURKA                 0.053   serine/threonine protein kinase 6 
AURKA                 0.053   serine/threonine protein kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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