Guide to the Human Genome
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Name: LOC100293250 Sequence: fasta or formatted (471aa) NCBI GI: 239756427
Description:

PREDICTED: similar to 3-phosphoinositide dependent protein kinase-1

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         40           2
 C cysteine            2.8         13           2
 D aspartate           3.8         18           2
 E glutamate           7.0         33           2
 F phenylalanine       4.5         21           2
 G glycine             8.3         39           2
 H histidine           2.1         10           1
 I isoleucine          4.2         20           2
 K lysine              5.7         27           2
 L leucine            10.8         51           2
 M methionine          1.7          8           1
 N asparagine          2.1         10           1
 P proline             7.2         34           3
 Q glutamine           3.6         17           2
 R arginine            6.6         31           2
 S serine              6.2         29           2
 T threonine           5.9         28           2
 V valine              4.7         22           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to 3-phosphoinositide dependent ... 
PDPK1                 0.764   3-phosphoinositide dependent protein kinase-1 isoform...
LOC100287510          0.725   PREDICTED: hypothetical protein XP_002343452 
PDPK1                 0.282   3-phosphoinositide dependent protein kinase-1 isofor...
SGK1                  0.204   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.204   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.204   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.204   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PRKX                  0.200   protein kinase, X-linked 
PRKACB                0.199   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACB                0.199   cAMP-dependent protein kinase catalytic subunit beta...
PRKACA                0.194   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.194   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACG                0.191   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
AKT2                  0.190   AKT2 kinase 
RPS6KB1               0.189   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
SGK2                  0.187   serum/glucocorticoid regulated kinase 2 isoform beta...
AKT3                  0.185   AKT3 kinase isoform 1 
AKT3                  0.185   AKT3 kinase isoform 2 
SGK3                  0.185   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.185   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK2                  0.184   serum/glucocorticoid regulated kinase 2 isoform alph...
AKT1                  0.184   AKT1 kinase 
AKT1                  0.184   AKT1 kinase 
AKT1                  0.184   AKT1 kinase 
PRKCA                 0.182   protein kinase C, alpha 
RPS6KA3               0.182   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
PRKCH                 0.179   protein kinase C, eta 
PRKCE                 0.178   protein kinase C, epsilon 
PRKCQ                 0.178   protein kinase C, theta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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