Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CSNK1G2 Sequence: fasta or formatted (415aa) NCBI GI: 153791733
Description:

casein kinase 1, gamma 2

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         21           1
 C cysteine            1.7          7           3
 D aspartate           5.8         24           2
 E glutamate           6.7         28           2
 F phenylalanine       4.8         20           2
 G glycine             8.2         34           3
 H histidine           3.1         13           1
 I isoleucine          4.3         18           2
 K lysine              8.2         34           2
 L leucine             9.6         40           2
 M methionine          2.4         10           1
 N asparagine          3.1         13           1
 P proline             5.5         23           1
 Q glutamine           3.1         13           1
 R arginine            7.2         30           2
 S serine              5.1         21           2
 T threonine           6.5         27           1
 V valine              4.1         17           1
 W tryptophan          0.5          2           1
 Y tyrosine            4.8         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase 1, gamma 2 
CSNK1G3               0.814   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.803   casein kinase 1, gamma 3 isoform 2 
CSNK1G3               0.794   casein kinase 1, gamma 3 isoform 1 
CSNK1G1               0.793   casein kinase 1, gamma 1 
CSNK1G3               0.784   casein kinase 1, gamma 3 isoform 4 
CSNK1E                0.404   casein kinase 1 epsilon 
CSNK1E                0.404   casein kinase 1 epsilon 
CSNK1D                0.401   casein kinase 1, delta isoform 2 
CSNK1D                0.401   casein kinase 1, delta isoform 1 
CSNK1A1               0.365   casein kinase 1, alpha 1 isoform 2 
CSNK1A1               0.358   casein kinase 1, alpha 1 isoform 1 
CSNK1A1L              0.350   casein kinase 1, alpha 1-like 
TTBK1                 0.162   tau tubulin kinase 1 
TTBK2                 0.159   tau tubulin kinase 2 
VRK1                  0.114   vaccinia related kinase 1 
VRK2                  0.090   vaccinia related kinase 2 isoform 3 
VRK2                  0.090   vaccinia related kinase 2 isoform 2 
VRK2                  0.090   vaccinia related kinase 2 isoform 1 
VRK2                  0.090   vaccinia related kinase 2 isoform 1 
VRK2                  0.090   vaccinia related kinase 2 isoform 1 
VRK2                  0.077   vaccinia related kinase 2 isoform 6 
VRK3                  0.070   vaccinia related kinase 3 isoform 2 
VRK3                  0.070   vaccinia related kinase 3 isoform 1 
LOC100293250          0.058   PREDICTED: similar to 3-phosphoinositide dependent ...
PDPK1                 0.058   3-phosphoinositide dependent protein kinase-1 isoform...
LOC100287510          0.058   PREDICTED: hypothetical protein XP_002343452 
AURKA                 0.050   serine/threonine protein kinase 6 
AURKA                 0.050   serine/threonine protein kinase 6 
AURKA                 0.050   serine/threonine protein kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press