Guide to the Human Genome
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Name: VRK2 Sequence: fasta or formatted (390aa) NCBI GI: 209862855
Description:

vaccinia related kinase 2 isoform 6

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [508aa] vaccinia related kinase 2 isoform 1
alt prot [508aa] vaccinia related kinase 2 isoform 1
alt prot [485aa] vaccinia related kinase 2 isoform 2
alt prot [396aa] vaccinia related kinase 2 isoform 3
alt prot [508aa] vaccinia related kinase 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         21           2
 C cysteine            1.8          7           2
 D aspartate           4.1         16           1
 E glutamate           6.4         25           2
 F phenylalanine       3.3         13           2
 G glycine             5.1         20           1
 H histidine           2.8         11           1
 I isoleucine          5.1         20           3
 K lysine              7.7         30           2
 L leucine            10.5         41           3
 M methionine          1.5          6           1
 N asparagine          5.6         22           2
 P proline             5.1         20           1
 Q glutamine           6.2         24           1
 R arginine            3.6         14           3
 S serine              8.5         33           2
 T threonine           5.4         21           1
 V valine              5.4         21           1
 W tryptophan          1.5          6           1
 Y tyrosine            4.9         19           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vaccinia related kinase 2 isoform 6 
VRK2                  1.000   vaccinia related kinase 2 isoform 2 
VRK2                  1.000   vaccinia related kinase 2 isoform 1 
VRK2                  1.000   vaccinia related kinase 2 isoform 1 
VRK2                  1.000   vaccinia related kinase 2 isoform 1 
VRK2                  0.702   vaccinia related kinase 2 isoform 3 
VRK1                  0.277   vaccinia related kinase 1 
VRK3                  0.158   vaccinia related kinase 3 isoform 2 
VRK3                  0.158   vaccinia related kinase 3 isoform 1 
CSNK1D                0.103   casein kinase 1, delta isoform 2 
CSNK1D                0.103   casein kinase 1, delta isoform 1 
CSNK1E                0.101   casein kinase 1 epsilon 
CSNK1E                0.101   casein kinase 1 epsilon 
CSNK1G3               0.091   casein kinase 1, gamma 3 isoform 4 
CSNK1G3               0.091   casein kinase 1, gamma 3 isoform 1 
CSNK1A1               0.091   casein kinase 1, alpha 1 isoform 2 
CSNK1G3               0.085   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.085   casein kinase 1, gamma 3 isoform 2 
CSNK1A1L              0.084   casein kinase 1, alpha 1-like 
CSNK1G2               0.083   casein kinase 1, gamma 2 
CSNK1G1               0.082   casein kinase 1, gamma 1 
CSNK1A1               0.079   casein kinase 1, alpha 1 isoform 1 
TTBK1                 0.075   tau tubulin kinase 1 
TTBK2                 0.072   tau tubulin kinase 2 
MAP3K1                0.048   mitogen-activated protein kinase kinase kinase 1 [H...
OXSR1                 0.028   oxidative-stress responsive 1 
MAP3K3                0.028   mitogen-activated protein kinase kinase kinase 3 iso...
MAP3K3                0.028   mitogen-activated protein kinase kinase kinase 3 iso...
MAP3K14               0.026   mitogen-activated protein kinase kinase kinase 14 [...
AURKB                 0.026   aurora kinase B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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