Search of human proteins with 9506651

Search of human proteins with 9506651

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9506651 potassium channel tetramerisation domain containing
5 [Homo sapiens]
         (234 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9506651 potassium channel tetramerisation domain containing 5...   477   e-135
gi|53829365 potassium channel tetramerisation domain containing ...   333   6e-92
gi|169234778 potassium channel tetramerisation domain containing...   304   4e-83
gi|39753959 potassium channel tetramerisation domain containing ...    97   1e-20
gi|169184031 PREDICTED: similar to potassium channel tetramerisa...    90   1e-18
gi|169179790 PREDICTED: similar to potassium channel tetramerisa...    90   1e-18
gi|169180181 PREDICTED: similar to potassium channel tetramerisa...    90   1e-18
gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]                  74   8e-14
gi|46255026 potassium channel tetramerisation domain containing ...    72   3e-13
gi|55926200 potassium channel tetramerisation domain containing ...    65   4e-11
gi|142356950 potassium channel tetramerisation domain containing...    62   4e-10
gi|146198864 potassium channel tetramerisation domain containing...    62   4e-10
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo...    60   2e-09
gi|189571693 potassium channel tetramerisation domain containing...    60   2e-09
gi|189571691 potassium channel tetramerisation domain containing...    60   2e-09
gi|19923973 potassium channel tetramerisation domain containing ...    59   3e-09
gi|13994353 potassium channel tetramerisation domain containing ...    58   6e-09
gi|38198663 potassium channel tetramerisation domain containing ...    57   1e-08
gi|27436996 potassium voltage-gated channel, subfamily G, member...    56   2e-08
gi|71143104 potassium channel tetramerisation domain containing ...    55   4e-08
gi|23308551 potassium channel tetramerisation domain containing ...    54   1e-07
gi|30578412 potassium channel tetramerisation domain containing ...    52   6e-07
gi|45387953 potassium channel tetramerization domain containing ...    49   4e-06
gi|25952108 potassium voltage-gated channel delayed-rectifier pr...    48   8e-06
gi|194018443 potassium channel tetramerisation domain containing...    47   1e-05
gi|194018441 potassium channel tetramerisation domain containing...    47   1e-05
gi|194018439 potassium channel tetramerisation domain containing...    47   1e-05
gi|218505694 potassium channel tetramerisation domain containing...    46   2e-05
gi|209969708 potassium channel tetramerisation domain containing...    46   2e-05
gi|40217617 potassium channel tetramerisation domain containing ...    46   2e-05

>gi|9506651 potassium channel tetramerisation domain containing 5
           [Homo sapiens]
          Length = 234

 Score =  477 bits (1228), Expect = e-135
 Identities = 234/234 (100%), Positives = 234/234 (100%)

Query: 1   MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQ 60
           MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQ
Sbjct: 1   MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQ 60

Query: 61  TLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE 120
           TLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE
Sbjct: 61  TLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE 120

Query: 121 GVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWK 180
           GVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWK
Sbjct: 121 GVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWK 180

Query: 181 FEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 234
           FEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
Sbjct: 181 FEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 234


>gi|53829365 potassium channel tetramerisation domain containing 2
           [Homo sapiens]
          Length = 263

 Score =  333 bits (855), Expect = 6e-92
 Identities = 161/196 (82%), Positives = 181/196 (92%), Gaps = 1/196 (0%)

Query: 40  GSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLC-QADPDLDSDKDETGAYLIDRDPTY 98
           G  ++WVRLNVGGTYF+TTRQTL R+PKSFL RLC Q DP+LDSDKDETGAYLIDRDPTY
Sbjct: 68  GGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTY 127

Query: 99  FGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVY 158
           FGP+LNYLRHGKL+I K+LAEEGVLEEAEFYNI SL++LVK++IR+ +++TSQ PVKHVY
Sbjct: 128 FGPILNYLRHGKLIITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVY 187

Query: 159 RVLQCQEEELTQMVSTMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTAS 218
           RVLQCQEEELTQMVSTMSDGWKFEQL+SIGSSYNYGNEDQAEFLCVVS+EL+N+  G   
Sbjct: 188 RVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVI 247

Query: 219 EPSEKAKILQERGSRM 234
           EPSEKAKILQERGSRM
Sbjct: 248 EPSEKAKILQERGSRM 263


>gi|169234778 potassium channel tetramerisation domain containing 17
           [Homo sapiens]
          Length = 297

 Score =  304 bits (779), Expect = 4e-83
 Identities = 147/198 (74%), Positives = 171/198 (86%), Gaps = 1/198 (0%)

Query: 33  GALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI 92
           GA  +  G   KWVRLNVGGT FLTTRQTLCR+ KSFL RLCQ + +L SD+DETGAYLI
Sbjct: 20  GAGGRAAGGWGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGE-ELQSDRDETGAYLI 78

Query: 93  DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQV 152
           DRDPTYFGP+LN+LRHGKLV++KD+AEEGVLEEAEFYNI  LI+++KD++ E+D   +QV
Sbjct: 79  DRDPTYFGPILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQV 138

Query: 153 PVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNT 212
           P KHVYRVLQCQEEELTQMVSTMSDGW+FEQLV+IGSSYNYG+EDQAEFLCVVSKELH+T
Sbjct: 139 PPKHVYRVLQCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHST 198

Query: 213 PYGTASEPSEKAKILQER 230
           P G +SE S K K  +E+
Sbjct: 199 PNGLSSESSRKTKSTEEQ 216


>gi|39753959 potassium channel tetramerisation domain containing 9
           [Homo sapiens]
          Length = 389

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 6/118 (5%)

Query: 40  GSVSKWVRLNVGGTYFLTTRQTLC-RDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTY 98
           G  + W+ LNVGG YF TTR TL  ++P S L  + +      + +D  GA+LIDR P Y
Sbjct: 85  GFHTDWLTLNVGGRYFTTTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEY 144

Query: 99  FGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKH 156
           F P+LNYLRHG+L++N  +   GVLEEA F+ I SLI+ ++  I     K SQ P  H
Sbjct: 145 FEPILNYLRHGQLIVNDGINLLGVLEEARFFGIDSLIEHLEVAI-----KNSQPPEDH 197


>gi|169184031 PREDICTED: similar to potassium channel
           tetramerisation domain containing 9 [Homo sapiens]
          Length = 261

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 40  GSVSKWVRLNVGGTYFLTTRQTLC-RDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTY 98
           G  + W+ L+VGG YF TT  TL  ++P   L  + +      + +D  GA+LID+ P Y
Sbjct: 85  GFHTDWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEY 144

Query: 99  FGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPV 154
           F P+LNYLRHG+L++N  +   GVLEEA F+ I SLI+ +K  I+        +P+
Sbjct: 145 FEPILNYLRHGQLIVNDGIDLLGVLEEARFFGIDSLIEHLKVAIKNSQPPEDHLPI 200


>gi|169179790 PREDICTED: similar to potassium channel
           tetramerisation domain containing 9 [Homo sapiens]
          Length = 261

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 40  GSVSKWVRLNVGGTYFLTTRQTLC-RDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTY 98
           G  + W+ L+VGG YF TT  TL  ++P   L  + +      + +D  GA+LID+ P Y
Sbjct: 85  GFHTDWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEY 144

Query: 99  FGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPV 154
           F P+LNYLRHG+L++N  +   GVLEEA F+ I SLI+ +K  I+        +P+
Sbjct: 145 FEPILNYLRHGQLIVNDGIDLLGVLEEARFFGIDSLIEHLKVAIKNSQPPEDHLPI 200


>gi|169180181 PREDICTED: similar to potassium channel
           tetramerisation domain containing 9 [Homo sapiens]
          Length = 261

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 40  GSVSKWVRLNVGGTYFLTTRQTLC-RDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTY 98
           G  + W+ L+VGG YF TT  TL  ++P   L  + +      + +D  GA+LID+ P Y
Sbjct: 85  GFHTDWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEY 144

Query: 99  FGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPV 154
           F P+LNYLRHG+L++N  +   GVLEEA F+ I SLI+ +K  I+        +P+
Sbjct: 145 FEPILNYLRHGQLIVNDGIDLLGVLEEARFFGIDSLIEHLKVAIKNSQPPEDHLPI 200


>gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]
          Length = 707

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 18/117 (15%)

Query: 39  PGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTY 98
           PG V   + LNVGG  F T+RQTL   P SF   L      + + KDETGA  IDRDPT 
Sbjct: 17  PGEV---IHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGR--ISTLKDETGAIFIDRDPTV 71

Query: 99  FGPVLNYLRHGKLVINKDLAEEGV-----LEEAEFYNITSLIKLVKDKIRERDSKTS 150
           F P+LN+LR       K+L   GV     L EA+FY +T L++ +  ++RE   ++S
Sbjct: 72  FAPILNFLR------TKELDPRGVHGSSLLHEAQFYGLTPLVRRL--QLREELDRSS 120


>gi|46255026 potassium channel tetramerisation domain containing 3
           [Homo sapiens]
          Length = 815

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 10/117 (8%)

Query: 20  LGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD 79
           + GG C       G+         + V+LNVGGT F T+RQTL   P SF   L      
Sbjct: 1   MAGGHC-------GSFPAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGR-- 51

Query: 80  LDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIK 136
           + + +DETGA  IDRDP  F P+LN+LR  +L + + ++   +  EAEFY IT L++
Sbjct: 52  ISTLRDETGAIFIDRDPAAFAPILNFLRTKELDL-RGVSINVLRHEAEFYGITPLVR 107


>gi|55926200 potassium channel tetramerisation domain containing 16
           [Homo sapiens]
          Length = 428

 Score = 65.5 bits (158), Expect = 4e-11
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 39  PGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSD--KDETGAYLIDRDP 96
           P S  + V LNVGG  + T   TL   P S L+++     D  +D  KD  G + IDRD 
Sbjct: 20  PNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDG 79

Query: 97  TYFGPVLNYLRHGKLVINKDLAEEGVLE-EAEFYNITSLIKLV-KDKIRE 144
             F  +L+YLR  ++V+     E+G L+ EAE++ +  L+KL+  D+I++
Sbjct: 80  FLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDEIKQ 129


>gi|142356950 potassium channel tetramerisation domain containing 14
           [Homo sapiens]
          Length = 255

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 5/103 (4%)

Query: 38  RPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPT 97
           R  ++S  V LNVGG +  TT  TL + P S L  +  +     +D +  G + IDR  T
Sbjct: 27  RRPTMSTVVELNVGGEFHTTTLGTLRKFPGSKLAEMFSSLAKASTDAE--GRFFIDRPST 84

Query: 98  YFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKD 140
           YF P+L+YLR G+ V  + + E  V  EA+FY I  L+KL++D
Sbjct: 85  YFRPILDYLRTGQ-VPTQHIPE--VYREAQFYEIKPLVKLLED 124


>gi|146198864 potassium channel tetramerisation domain containing 4
           [Homo sapiens]
          Length = 259

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 3/100 (3%)

Query: 43  SKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPV 102
           S  + LNVGG  ++T +QTL + P +FL  +         D D  G Y IDRD   F  V
Sbjct: 32  STLMTLNVGGYLYITQKQTLTKYPDTFLEGIVNGKILCPFDAD--GHYFIDRDGLLFRHV 89

Query: 103 LNYLRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKDK 141
           LN+LR+G+L++ +   E  +L +EAEF+ +  L + VK +
Sbjct: 90  LNFLRNGELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSR 129


>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
           sapiens]
          Length = 316

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 6/129 (4%)

Query: 40  GSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYF 99
           G  +K+V+LNVGG+ + TT + L R   + L  +     ++ +DK+  G  LIDR   +F
Sbjct: 24  GLGNKYVQLNVGGSLYYTTVRALTRHD-TMLKAMFSGRMEVLTDKE--GWILIDRCGKHF 80

Query: 100 GPVLNYLRHGKLVINKDLAE-EGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVY 158
           G +LNYLR   + + ++  E + ++ EA++Y I  L+ + +  +  +D K S  PV ++ 
Sbjct: 81  GTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVNMCQSAL--QDKKDSYQPVCNIP 138

Query: 159 RVLQCQEEE 167
            +   +EEE
Sbjct: 139 IITSLKEEE 147


>gi|189571693 potassium channel tetramerisation domain containing 6
           [Homo sapiens]
          Length = 237

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNY 105
           V LNVGG  + T+  TL R P S L  +   D    + +D  G Y IDRD   F  VLN+
Sbjct: 14  VTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGD--FPTARDPQGNYFIDRDGPLFRYVLNF 71

Query: 106 LRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKD 140
           LR  +L +  D  E  +L +EA+FY I  LI+ + D
Sbjct: 72  LRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLND 107


>gi|189571691 potassium channel tetramerisation domain containing 6
           [Homo sapiens]
          Length = 237

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNY 105
           V LNVGG  + T+  TL R P S L  +   D    + +D  G Y IDRD   F  VLN+
Sbjct: 14  VTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGD--FPTARDPQGNYFIDRDGPLFRYVLNF 71

Query: 106 LRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKD 140
           LR  +L +  D  E  +L +EA+FY I  LI+ + D
Sbjct: 72  LRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLND 107


>gi|19923973 potassium channel tetramerisation domain containing 12
           [Homo sapiens]
          Length = 325

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 6/130 (4%)

Query: 8   LLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPK 67
           L    RG    G GGG      +G  + +  P      V LNVGG  ++T R T+   P 
Sbjct: 3   LADSTRGLPNGGGGGG-----GSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPD 57

Query: 68  SFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE-EA 126
           S L+R+       +  +D  G + +DRD   F  +L+YLR  +LV+     E   L+ EA
Sbjct: 58  SLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREA 117

Query: 127 EFYNITSLIK 136
           E++ +  L++
Sbjct: 118 EYFELPELVR 127


>gi|13994353 potassium channel tetramerisation domain containing 10
           [Homo sapiens]
          Length = 313

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 43  SKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPV 102
           SK+V+LNVGG  + TT QTL +   + L  +     ++ +D +  G  LIDR   +FG +
Sbjct: 31  SKYVKLNVGGALYYTTMQTLTKQ-DTMLKAMFSGRMEVLTDSE--GWILIDRCGKHFGTI 87

Query: 103 LNYLRHGKLVINKDLAE-EGVLEEAEFYNITSLIKLVKDKIRERDS 147
           LNYLR G + + +   E E +L EA++Y +  L++  +  ++ +D+
Sbjct: 88  LNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQNKDT 133


>gi|38198663 potassium channel tetramerisation domain containing 8
           [Homo sapiens]
          Length = 473

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 39  PGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDL-------DSDKDETGAYL 91
           P    + V LNVGG  ++T   TL   P S L  +              +  +D    + 
Sbjct: 39  PSPFPEVVELNVGGQVYVTKHSTLLSVPDSTLASMFSPSSPRGGARRRGELPRDSRARFF 98

Query: 92  IDRDPTYFGPVLNYLRHGKLVINKDLAE-EGVLEEAEFYNITSLIKLVKDKIRERDS 147
           IDRD   F  VL+YLR  +L + +   E E +L EAE++ +T L+KL+  K+ +++S
Sbjct: 99  IDRDGFLFRYVLDYLRDKQLALPEHFPEKERLLREAEYFQLTDLVKLLSPKVTKQNS 155


>gi|27436996 potassium voltage-gated channel, subfamily G, member 4
           [Homo sapiens]
          Length = 519

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 10/165 (6%)

Query: 23  GLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFL--YRLCQADPDL 80
           GL  R    +GAL   P  + K + +NVGG  +L    TL R P S L   RLC++  ++
Sbjct: 38  GLYYRRVRKVGALDASPVDLKKEILINVGGRRYLLPWSTLDRFPLSRLSKLRLCRSYEEI 97

Query: 81  ----DSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNI--TSL 134
               D   +++  +  DR P+ FG ++++L  GKLV+ +++      EE  ++ I    L
Sbjct: 98  VQLCDDYDEDSQEFFFDRSPSAFGVIVSFLAAGKLVLLQEMCALSFQEELAYWGIEEAHL 157

Query: 135 IKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGW 179
            +    K+  +  +  ++   H   VL+ Q E  T+  ++ S  W
Sbjct: 158 ERCCLRKLLRKLEELEELAKLHREDVLRQQRE--TRRPASHSSRW 200


>gi|71143104 potassium channel tetramerisation domain containing 21
           [Homo sapiens]
          Length = 260

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNY 105
           + LNVGG  + T+  TL   P S L  +      + + +D  G   IDRD   F  +LN+
Sbjct: 5   ITLNVGGKLYTTSLATLTSFPDSMLGAMFSGK--MPTKRDSQGNCFIDRDGKVFRYILNF 62

Query: 106 LRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKDK 141
           LR   L + +D  E G+L  EA+FY +  LI+ +++K
Sbjct: 63  LRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEK 99


>gi|23308551 potassium channel tetramerisation domain containing 7
           [Homo sapiens]
          Length = 289

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 4/118 (3%)

Query: 34  ALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID 93
           AL   P    + V LN+GG +F T   TL     + L  +      + +D +  G Y ID
Sbjct: 41  ALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFSGRHYIPTDSE--GRYFID 98

Query: 94  RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQ 151
           RD T+FG VLN+LR G L   + +    V +EA++Y I  L++ +++    +  K  Q
Sbjct: 99  RDGTHFGDVLNFLRSGDLPPRERV--RAVYKEAQYYAIGPLLEQLENMQPLKGEKVRQ 154


>gi|30578412 potassium channel tetramerisation domain containing 13
           [Homo sapiens]
          Length = 329

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 7/116 (6%)

Query: 43  SKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPV 102
           SK+V+LNVGG+   TT +TL     + L  +     ++ +D    G  LIDR   +FG +
Sbjct: 40  SKYVKLNVGGSLHYTTLRTLTGQD-TMLKAMFSGRVEVLTDAG--GWVLIDRSGRHFGTI 96

Query: 103 LNYLRHGKLVINKDLAEEG-VLEEAEFYNITSLI---KLVKDKIRERDSKTSQVPV 154
           LNYLR G + + +   E G +L EA +Y +  LI   +L   + RE  S    +P+
Sbjct: 97  LNYLRDGSVPLPESTRELGELLGEARYYLVQGLIEDCQLALQQKRETLSPLCLIPM 152


>gi|45387953 potassium channel tetramerization domain containing 18
           [Homo sapiens]
          Length = 426

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNY 105
           +RLNVGG  +   R++LCR   S L  +      L +D  E+GA +IDRD   F  +L+Y
Sbjct: 14  LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTD--ESGACVIDRDGRLFKYLLDY 71

Query: 106 LRHGKLVINKDLAEEGVL-EEAEFYNI 131
           L HG++ I  D      L EEA+++ I
Sbjct: 72  L-HGEVQIPTDEQTRIALQEEADYFGI 97


>gi|25952108 potassium voltage-gated channel delayed-rectifier
           protein S3 [Homo sapiens]
          Length = 491

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 33  GALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRL--CQADPDLDSDKDETGA- 89
           G    RPG   + V LNVGG      + TL R P + L +L  C ++  +    D+    
Sbjct: 4   GEFFHRPGQDEELVNLNVGGFKQSVDQSTLLRFPHTRLGKLLTCHSEEAILELCDDYSVA 63

Query: 90  ---YLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSL 134
              Y  DR+P+ F  VLN+   GKL + ++L      +E E++ I  L
Sbjct: 64  DKEYYFDRNPSLFRYVLNFYYTGKLHVMEELCVFSFCQEIEYWGINEL 111


>gi|194018443 potassium channel tetramerisation domain containing 15
           isoform 2 [Homo sapiens]
          Length = 283

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD--LDSDKDETGAYLIDRDPTYFGPVL 103
           V ++VGG  + ++  TL + P S + RL        LDS K     Y IDRD   F  VL
Sbjct: 58  VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQH---YFIDRDGEIFRYVL 114

Query: 104 NYLRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKDKIRERDSK 148
           ++LR  KL++  D  +  +L EEA +Y +  +++ ++   +E++ +
Sbjct: 115 SFLRTSKLLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQEQEQR 160


>gi|194018441 potassium channel tetramerisation domain containing 15
           isoform 2 [Homo sapiens]
          Length = 283

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD--LDSDKDETGAYLIDRDPTYFGPVL 103
           V ++VGG  + ++  TL + P S + RL        LDS K     Y IDRD   F  VL
Sbjct: 58  VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQH---YFIDRDGEIFRYVL 114

Query: 104 NYLRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKDKIRERDSK 148
           ++LR  KL++  D  +  +L EEA +Y +  +++ ++   +E++ +
Sbjct: 115 SFLRTSKLLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQEQEQR 160


>gi|194018439 potassium channel tetramerisation domain containing 15
           isoform 1 [Homo sapiens]
          Length = 234

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD--LDSDKDETGAYLIDRDPTYFGPVL 103
           V ++VGG  + ++  TL + P S + RL        LDS K     Y IDRD   F  VL
Sbjct: 58  VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQH---YFIDRDGEIFRYVL 114

Query: 104 NYLRHGKLVINKDLAEEGVL-EEAEFYNITSLIKLVKDKIRERDSK 148
           ++LR  KL++  D  +  +L EEA +Y +  +++ ++   +E++ +
Sbjct: 115 SFLRTSKLLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQEQEQR 160


>gi|218505694 potassium channel tetramerisation domain containing 1
           isoform b [Homo sapiens]
          Length = 865

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD--LDSDKDETGAYLIDRDPTYFGPVL 103
           V ++VGG  + ++  TL + P+S + RL        LDS K     Y IDRD   F  +L
Sbjct: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQH---YFIDRDGQMFRYIL 696

Query: 104 NYLRHGKLVINKDLAEEGVL-EEAEFYNITSLI 135
           N+LR  KL+I  D  +  +L EEA+++ +  ++
Sbjct: 697 NFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729


>gi|209969708 potassium channel tetramerisation domain containing 1
           isoform a [Homo sapiens]
          Length = 257

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD--LDSDKDETGAYLIDRDPTYFGPVL 103
           V ++VGG  + ++  TL + P+S + RL        LDS K     Y IDRD   F  +L
Sbjct: 32  VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQH---YFIDRDGQMFRYIL 88

Query: 104 NYLRHGKLVINKDLAEEGVL-EEAEFYNITSLI 135
           N+LR  KL+I  D  +  +L EEA+++ +  ++
Sbjct: 89  NFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121


>gi|40217617 potassium channel tetramerisation domain containing 1
           isoform a [Homo sapiens]
          Length = 257

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 46  VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD--LDSDKDETGAYLIDRDPTYFGPVL 103
           V ++VGG  + ++  TL + P+S + RL        LDS K     Y IDRD   F  +L
Sbjct: 32  VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQH---YFIDRDGQMFRYIL 88

Query: 104 NYLRHGKLVINKDLAEEGVL-EEAEFYNITSLI 135
           N+LR  KL+I  D  +  +L EEA+++ +  ++
Sbjct: 89  NFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,570,293
Number of Sequences: 37866
Number of extensions: 431295
Number of successful extensions: 1473
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1364
Number of HSP's gapped (non-prelim): 88
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.