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Search of human proteins with 9506605
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9506605 family with sequence similarity 64, member A [Homo
sapiens]
(238 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9506605 family with sequence similarity 64, member A [Homo sa... 473 e-134
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 43 2e-04
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 37 0.015
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 36 0.033
gi|66932943 variable charge, X chromosome [Homo sapiens] 35 0.044
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 35 0.057
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 35 0.057
gi|48762947 variable charge, X-linked 3A [Homo sapiens] 35 0.075
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 34 0.097
gi|14249386 zinc finger protein 496 [Homo sapiens] 34 0.097
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 34 0.13
gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens] 33 0.28
gi|239744051 PREDICTED: hypothetical protein XP_002343025 [Homo ... 32 0.37
gi|187761324 shootin1 isoform a [Homo sapiens] 32 0.37
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 32 0.48
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 0.48
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 32 0.48
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 32 0.48
gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens] 32 0.48
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 32 0.48
gi|60097902 filaggrin [Homo sapiens] 32 0.63
gi|4885187 distal-less homeobox 5 [Homo sapiens] 32 0.63
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 32 0.63
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 32 0.63
gi|122937227 U2-associated SR140 protein [Homo sapiens] 32 0.63
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 31 0.82
gi|11641413 cell division cycle 25B isoform 1 [Homo sapiens] 31 0.82
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 31 0.82
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 30 1.4
gi|169210203 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
>gi|9506605 family with sequence similarity 64, member A [Homo
sapiens]
Length = 238
Score = 473 bits (1218), Expect = e-134
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MASRWQNMGTSVRRRSLQHQEQLEDSKELQPVVSHQETSVGALGSLCRQFQRRLPLRTVN 60
MASRWQNMGTSVRRRSLQHQEQLEDSKELQPVVSHQETSVGALGSLCRQFQRRLPLRTVN
Sbjct: 1 MASRWQNMGTSVRRRSLQHQEQLEDSKELQPVVSHQETSVGALGSLCRQFQRRLPLRTVN 60
Query: 61 LNLRAGPSWKRLETPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARR 120
LNLRAGPSWKRLETPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARR
Sbjct: 61 LNLRAGPSWKRLETPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARR 120
Query: 121 RKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRRE 180
RKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRRE
Sbjct: 121 RKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRRE 180
Query: 181 AAFRSPYSSTEPLCSPSESDSDLEPVGAGIQHLQKLSQELDEAIMAEESGDIVSLIHD 238
AAFRSPYSSTEPLCSPSESDSDLEPVGAGIQHLQKLSQELDEAIMAEESGDIVSLIHD
Sbjct: 181 AAFRSPYSSTEPLCSPSESDSDLEPVGAGIQHLQKLSQELDEAIMAEESGDIVSLIHD 238
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 43.1 bits (100), Expect = 2e-04
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 78 GQQGLQAAARSAK--------SALGAVSQRIQESCQSGTKWLVETQ-VKARRRKRGAQKG 128
G GL AA AK A G + ES +SG L+E RR++ Q G
Sbjct: 222 GAPGLAAAIAGAKLRKVSKQEEASGGPTAPKAESGRSGGGGLMEEMNAMLARRRKATQVG 281
Query: 129 SGSPT-HSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRSPY 187
+P S +Q+ A + S PWEK L R +++
Sbjct: 282 EKTPKDESANQEEPEARVPAQSESVRRPWEKNSTTL-------------PRMKSSSSVTT 328
Query: 188 SSTEPLCSPSESD-SDLEPVGAGI-----QHLQKLSQELDEAIMAE 227
S T+P C+PS SD SDL+ V + + LQK+ +E+ EA + E
Sbjct: 329 SETQP-CTPSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQE 373
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 37.0 bits (84), Expect = 0.015
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 71 RLETPEPGQQGLQAAARSAKSALGAVSQRIQESC-QSGTKWLVETQVKARRRKRGAQKGS 129
RL P P + L AA + S R E Q+G +++ARRRK G +K +
Sbjct: 675 RLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRK-GQEKRN 733
Query: 130 GSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRSPYS 188
P+ S S+ +R ++ ++S + + R R S ++ RSR + RS S
Sbjct: 734 SGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRS 792
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 35.8 bits (81), Expect = 0.033
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 74 TPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARRRKRGAQKGSGSPT 133
+P+P G A A+ A + + + TK V + KA RR R +KG+ +
Sbjct: 2 SPKPRASGPPAKAKEAGKRKSSSQPSPSDPKKKTTK--VAKKGKAVRRGRRGKKGAATKM 59
Query: 134 HSLSQKSTRLSGAAPAHSAADPWEKEHHRL----SVRMGSHAHPLRRS-------RREAA 182
+++ AAP S E H L V G+ PL + +E+
Sbjct: 60 AAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESE 119
Query: 183 FRSPYSSTEPLCSPSESDSDL-EPVGAGIQHLQKLSQELD-EAIMAEES 229
P S + P +S++ EP+ Q + LSQE + E +++ES
Sbjct: 120 VEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQES 168
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 35.4 bits (80), Expect = 0.044
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 11/162 (6%)
Query: 74 TPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARRRKRGAQKGSGSPT 133
+P+P G A A A + + + TK V + KA RR R +KG+ +
Sbjct: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTK--VAKKGKAVRRGRRGKKGAATKM 59
Query: 134 HSLSQKSTRLSGAAPAHSAADPWEKEHHRL----SVRMGSHAHPLRRSRREAAFRSPYSS 189
+++ + AAP S E H L V G+ PL +EA P S
Sbjct: 60 AAVTAPEAESAPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPL---SQEAELEEPLSQ 116
Query: 190 TEPLCSPSESDSDL-EPVGAGIQHLQKLSQELD-EAIMAEES 229
+ P +S + EP+ + + LSQE E +++ES
Sbjct: 117 ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQES 158
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 35.0 bits (79), Expect = 0.057
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 54 LPLRTVNLNLRAGPSWKRLETPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVE 113
LPL+ L L G + + L+ P Q+ + A+ + S R+++S S +
Sbjct: 529 LPLKIEELALAKGITEECLKQPSLEQKEGRRASHTLLP-----SHRLKQSADSSSSRSSS 583
Query: 114 TQVKARRRKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHP 173
+ + R + + SGS +HS + R A A + A+P R +MGS +
Sbjct: 584 SSSSSSRSRSRSPDSSGSRSHSPLRSKQR--DVAQARTHANP------RGRPKMGSRSTS 635
Query: 174 LRRSRREAAFRSPYSSTEPLCSPSES 199
RSR + RS S++ SP S
Sbjct: 636 ESRSRSRSRSRSASSNSRKSLSPGVS 661
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 35.0 bits (79), Expect = 0.057
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 134 HSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGS-----HAHPLRRSRREAAFRSPYS 188
HSL ++S R +H + +E+ H R+S R S H PL RSR + R +S
Sbjct: 1815 HSLLERSHRSPSERRSHRS---FERSHRRISERSHSPSEKSHLSPLERSRCSPSERRGHS 1871
Query: 189 STEPLC-SPSE 198
S+ C SPSE
Sbjct: 1872 SSGKTCHSPSE 1882
Score = 34.7 bits (78), Expect = 0.075
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 119 RRRKRGAQKGSGSPTH-SLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRS 177
RR + +Q+ P+ S S R + S P E+ HH S R SH P RRS
Sbjct: 1668 RRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRHHSPSKR--SHRSPARRS 1725
Query: 178 RREAAFRSPYSSTE-PLCSPSE 198
R + RS +S +E SPSE
Sbjct: 1726 HRSPSERSHHSPSERSHHSPSE 1747
>gi|48762947 variable charge, X-linked 3A [Homo sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.075
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 15/169 (8%)
Query: 74 TPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARRRKRGAQKGSGSPT 133
+P+P G A A A + + + TK V + KA RR R +KG+ +
Sbjct: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTK--VAKKGKAVRRGRRGKKGAATKM 59
Query: 134 HSLSQKSTRLSGAAPAHSAADPWEKEHHRL----SVRMGSHAHPLRRS-------RREAA 182
+++ AAP S E H L V G+ PL + +E+
Sbjct: 60 AAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESE 119
Query: 183 FRSPYSSTEPLCSPSESDSDL-EPVGAGIQHLQKLSQELD-EAIMAEES 229
P S + P +S++ EP+ Q + LSQE + E +++ES
Sbjct: 120 VEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQES 168
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 34.3 bits (77), Expect = 0.097
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 70 KRLETPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARRRKRG-AQKG 128
++L+ E GLQ+ + ALG Q+ + Q+ + L E +++A R R A+K
Sbjct: 1082 EKLKKKEFEMSGLQSKIED-EQALGMQLQKKIKELQARIEEL-EEEIEAERASRAKAEKQ 1139
Query: 129 SGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRSPYS 188
+ L + S RL A A SA K+ + +RR EA + +
Sbjct: 1140 RSDLSRELEEISERLEEAGGATSAQIEMNKKRE-------AEFQKMRRDLEEATLQ--HE 1190
Query: 189 STEPLCSPSESDSDLEPVGAGIQHLQKLSQEL--DEAIMAEESGDIVS 234
+T +DS E +G I +LQ++ Q+L +++ M E D+ S
Sbjct: 1191 ATAATLRKKHADSVAE-LGEQIDNLQRVKQKLEKEKSEMKMEIDDLAS 1237
>gi|14249386 zinc finger protein 496 [Homo sapiens]
Length = 587
Score = 34.3 bits (77), Expect = 0.097
Identities = 35/144 (24%), Positives = 50/144 (34%), Gaps = 4/144 (2%)
Query: 70 KRLETPEPGQQGLQAAARSAKSALGAVSQR----IQESCQSGTKWLVETQVKARRRKRGA 125
+ L +P Q+ L A+ RS+ A G V + +C +W V R R+
Sbjct: 373 EELGSPTEKQRSLPASHRSSTEAGGEVQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQE 432
Query: 126 QKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRS 185
+ S L S L G +H A P+ S R+ SH RR +
Sbjct: 433 KPHECSVCGELFSDSEDLDGHLESHEAQKPYRCGACGKSFRLNSHLLSHRRIHLQPDRLQ 492
Query: 186 PYSSTEPLCSPSESDSDLEPVGAG 209
P E S EP+ G
Sbjct: 493 PVEKREQAASEDADKGPKEPLENG 516
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 33.9 bits (76), Expect = 0.13
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 119 RRRKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSA-ADPWEKEHHRLSVRM-GSHAHPLRR 176
R++ R +K SG + S S G PA A A PW+ + HR R GSHA R
Sbjct: 516 RKKSRRERKRSGEAKEAASSSS----GTQPAPPAPASPWDSKKHRSRDRKPGSHASSSAR 571
Query: 177 SRREAAFRS 185
R + RS
Sbjct: 572 RRSRSRSRS 580
>gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens]
Length = 1158
Score = 32.7 bits (73), Expect = 0.28
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 53 RLPLRTVNLNLRAGPSWKRLETPEPGQQGLQ-----AAARSAKSALGAVSQRIQESCQS 106
R PL T N RA P RL P P Q GLQ A R+ ++AL A ++R E Q+
Sbjct: 1028 RRPLYT---NERARPVPPRLPAPPPAQAGLQEALQAAGTRAGRAALAAAARRPPEVVQA 1083
>gi|239744051 PREDICTED: hypothetical protein XP_002343025 [Homo
sapiens]
Length = 306
Score = 32.3 bits (72), Expect = 0.37
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 60 NLNLRAGPSWKRLETPEPGQQGLQAAARSAKSALGAVSQRIQ------ESCQSGT----K 109
++ +R P W L Q L +A S +G+V+ IQ C G +
Sbjct: 17 DVGVRRAPLWASLCDRRLPQPPLCVLPSTASSEVGSVAASIQGPALGTRPCPWGVLAVGE 76
Query: 110 WLVETQVKARRRKRGAQKGSGSPTHSLSQKSTRLS-----GAAPAHSAADPWEKEHHRLS 164
W V ++ R R G +GSG+P + K+ R S A+P A P HR
Sbjct: 77 WAVSGCIR-RERSTGGCEGSGTPLVGVELKAVRSSEEGSRRASPGLCWAGPGSLAAHR-P 134
Query: 165 VRMGSHAHPLRR 176
R GS A RR
Sbjct: 135 QRWGSGALWWRR 146
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 32.3 bits (72), Expect = 0.37
Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 6 QNMGTSVRRRSLQHQEQLEDSKELQPVVSHQETSVG--ALGSLCRQFQRRLPLRTVNLNL 63
+++ + +R+RS + K QP + + T + A+ + + ++ + LR VN
Sbjct: 371 RSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTA 430
Query: 64 RAGPSWKRLETPEPGQQGLQAAARSAKSALGAVSQRIQE-SCQSGTKWLVETQVKA--RR 120
R +T +G ++A K LG +++ S +S ET+++ RR
Sbjct: 431 RP-------KTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERILRR 483
Query: 121 RKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRRE 180
RK A+ S SPT L +T S + P + K L + E
Sbjct: 484 RKVTAEADSSSPTGIL---ATSESKSMPVLGSVSSVTKT-------------ALNKKTLE 527
Query: 181 AAFRSPYSSTEPLCSPSESDSDLE 204
A F SP + P P E LE
Sbjct: 528 AEFNSP---SPPTPEPGEGPRKLE 548
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 32.0 bits (71), Expect = 0.48
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 98 QRIQESCQSGTKWLVETQVKARRRKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWE 157
Q++ E K E + K + ++ P ++ A A S+ P
Sbjct: 403 QKLWEEVGEEAKKEAEEKAKEEAEEVAEEEAEKEP-QDWAETKEEPEAEAEAASSGVPAT 461
Query: 158 KEHHRLSVR-MGSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSDLEPVGAGIQHLQKL 216
K+H + V + + PL A +P S+ P SP++SD+ + P A H +KL
Sbjct: 462 KQHPEVQVEDTDADSCPLM------AEENPPSTVLPPPSPAKSDTLIVPSSASGTHRKKL 515
Query: 217 SQELDEA 223
E DEA
Sbjct: 516 PSEDDEA 522
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 32.0 bits (71), Expect = 0.48
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 118 ARRRKRGAQKGSGSP--THSLSQKSTRLSGAAPAHSAADP-WEKEHHRLSVRMGSHAHPL 174
A+++K+ + KGS S T + S+ S PA + EK R A +
Sbjct: 297 AKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEV 356
Query: 175 RRSRRE--AAFRSPYSSTEPLCSP----SESDSDLEPVGAGIQHLQKLSQELDEAIMAEE 228
S E A+F+S + + P S S SDSD EP H Q + + E + +EE
Sbjct: 357 EESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEP---SQNHSQGPLRSMVEDLQSEE 413
Query: 229 SGD 231
S +
Sbjct: 414 SDE 416
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 32.0 bits (71), Expect = 0.48
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 124 GAQKGSGSP--THSLSQKSTRLSGAAPAHSAADPWEKEHHRLSV-----RMGSHAHPLRR 176
G QKG GS T+ + + R++ P P+ + LSV G R
Sbjct: 180 GPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239
Query: 177 SR---REAAFRSPYSSTEPLCSPSESDS 201
+R R ++F S ST PLC+ S S S
Sbjct: 240 TRPLPRTSSFLSEVPSTRPLCATSSSHS 267
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 32.0 bits (71), Expect = 0.48
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 124 GAQKGSGSP--THSLSQKSTRLSGAAPAHSAADPWEKEHHRLSV-----RMGSHAHPLRR 176
G QKG GS T+ + + R++ P P+ + LSV G R
Sbjct: 180 GPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239
Query: 177 SR---REAAFRSPYSSTEPLCSPSESDS 201
+R R ++F S ST PLC+ S S S
Sbjct: 240 TRPLPRTSSFLSEVPSTRPLCATSSSHS 267
>gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens]
Length = 450
Score = 32.0 bits (71), Expect = 0.48
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 149 AHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSD---LEP 205
A ADPW KE+H ++ PL RSP EP P E D + L P
Sbjct: 180 AQLLADPWGKEYH-------TNNAPL-------LLRSPAWPPEPSIRPQEQDYEPKVLHP 225
Query: 206 VGAGIQHL--QKLSQELDEAIMAEESG 230
+ + + HL QK ++E D A + +G
Sbjct: 226 LFSALDHLVEQKRNREPDCAEIHPSAG 252
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 32.0 bits (71), Expect = 0.48
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 124 GAQKGSGSP--THSLSQKSTRLSGAAPAHSAADPWEKEHHRLSV-----RMGSHAHPLRR 176
G QKG GS T+ + + R++ P P+ + LSV G R
Sbjct: 180 GPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239
Query: 177 SR---REAAFRSPYSSTEPLCSPSESDS 201
+R R ++F S ST PLC+ S S S
Sbjct: 240 TRPLPRTSSFLSEVPSTRPLCATSSSHS 267
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 31.6 bits (70), Expect = 0.63
Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 7/152 (4%)
Query: 89 AKSALGAVSQRIQESCQSGTKWLVETQVKARRRKRGAQKGSGSPTHSLSQKSTRLSGAAP 148
++S+ G S ++ S T V Q R++RG++ + S+ S R SG+A
Sbjct: 260 SRSSDGKSSSQVNRSRHENTSQ-VPLQESRTRKRRGSRVSQDRDSEGHSEDSERHSGSAS 318
Query: 149 AHSAADPWEK-----EHHRL-SVRMGSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSD 202
+ WE+ H R SH H SR+ + SS S E
Sbjct: 319 RNHHGSAWEQSRDGSRHPRSHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHEQARS 378
Query: 203 LEPVGAGIQHLQKLSQELDEAIMAEESGDIVS 234
G H Q A ++ VS
Sbjct: 379 SPGERHGSGHQQSADSSRHSATGRGQASSAVS 410
Score = 28.9 bits (63), Expect = 4.1
Identities = 52/233 (22%), Positives = 70/233 (30%), Gaps = 33/233 (14%)
Query: 10 TSVRRRSLQHQEQLEDSKELQPVVSHQETSVGALGSLCRQFQRRLPLRTVNLNLRAGPSW 69
TS RR H EQ DS Q+T G GS R Q ++V+ + +G
Sbjct: 3405 TSTGRRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRRGRQGSHYEQSVDRSGHSGS-- 3462
Query: 70 KRLETPEPGQQGLQAAARSAKSALGAVSQRIQESCQSGTKWL----VETQVKARRRKRGA 125
T G+ ++SA Q S W TQ + R +
Sbjct: 3463 HHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQADSSRHSQSG 3522
Query: 126 QKGSGSPTHSLSQKST---------------RLSGAAPAHSAADPWEK---------EHH 161
Q S P S +Q S+ R SG+A + E+ HH
Sbjct: 3523 QGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHRGSAQEQSRDGSRHPTSHH 3582
Query: 162 RLSVRMGSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSDLEPVGAGIQHLQ 214
H H SR+ + SS S E G H Q
Sbjct: 3583 E---DRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQ 3632
>gi|4885187 distal-less homeobox 5 [Homo sapiens]
Length = 289
Score = 31.6 bits (70), Expect = 0.63
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 70 KRLETPEPGQQGLQAAA---RSAKSALGAVSQRIQESCQSGTKWLVETQVKA------RR 120
K++ P Q AA R K+ A+ +R + + G L +TQVK +
Sbjct: 135 KKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLG---LTQTQVKIWFQNKRSK 191
Query: 121 RKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSRRE 180
K+ + G P HS S S ++ +P A WE + S+ HAHP ++
Sbjct: 192 IKKIMKNGEMPPEHSPSS-SDPMACNSPQSPAV--WEPQGSSRSLSHHPHAHPPTSNQSP 248
Query: 181 AAFRSPYSSTEPLCSPSESDSDLEPVGAGIQH 212
A+ S++ + S +S L P G+ +QH
Sbjct: 249 ASSYLENSASWYTSAASSINSHLPPPGS-LQH 279
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 31.6 bits (70), Expect = 0.63
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 90 KSALGAVSQRIQESCQSGTKWLVETQVKARRRKRG-AQKGSGSPTHSLSQKSTRLSGAAP 148
+ ALG Q+ + Q+ + L E +++A R R A+K + L + S RL A
Sbjct: 1103 EQALGIQLQKKIKELQARIEEL-EEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGG 1161
Query: 149 AHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSDLEPVGA 208
A SA K+ + +RR EA + + +T +DS E +G
Sbjct: 1162 ATSAQIEMNKKRE-------AEFQKMRRDLEEATLQ--HEATAATLRKKHADSVAE-LGE 1211
Query: 209 GIQHLQKLSQEL--DEAIMAEESGDIVS 234
I +LQ++ Q+L +++ M E D+ S
Sbjct: 1212 QIDNLQRVKQKLEKEKSEMKMEIDDLAS 1239
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 31.6 bits (70), Expect = 0.63
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 90 KSALGAVSQRIQESCQSGTKWLVETQVKARRRKRG-AQKGSGSPTHSLSQKSTRLSGAAP 148
+ ALG Q+ + Q+ + L E +++A R R A+K + L + S RL A
Sbjct: 1103 EQALGIQLQKKIKELQARIEEL-EEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGG 1161
Query: 149 AHSAADPWEKEHHRLSVRMGSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSDLEPVGA 208
A SA K+ + +RR EA + + +T +DS E +G
Sbjct: 1162 ATSAQIEMNKKRE-------AEFQKMRRDLEEATLQ--HEATAATLRKKHADSVAE-LGE 1211
Query: 209 GIQHLQKLSQEL--DEAIMAEESGDIVS 234
I +LQ++ Q+L +++ M E D+ S
Sbjct: 1212 QIDNLQRVKQKLEKEKSEMKMEIDDLAS 1239
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 31.6 bits (70), Expect = 0.63
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 101 QESCQSGTKWLVETQVKARRRKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEH 160
+E +S +K E RK ++ S SP+ S S R+ +P ++ E+ H
Sbjct: 902 KEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSH 961
Query: 161 HRLSVRMGSHAHPLRRSRREAAFRSPYSSTEP 192
S SH R ++A RSP S P
Sbjct: 962 KESSRSRSSHKDSPRDVSKKAK-RSPSGSRTP 992
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 31.2 bits (69), Expect = 0.82
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 111 LVETQVKARRRKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSH 170
LVE + +RRR+ S S +HS S+ +R S + + S + R R GS
Sbjct: 172 LVEDKPGSRRRR----SYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
Query: 171 AHPLRRSRREAAFRSPYSSTEPLCSPSESDSDLEPVGAGIQHLQKLSQELDEAIMAEES 229
+ RSR ++ R S E SPS+ S AG + K + +E I ++
Sbjct: 228 SRSKSRSRSQSRSR---SKKEKSRSPSKEKSRSRSHSAG-KSRSKSKDQAEEKIQNNDN 282
Score = 27.7 bits (60), Expect = 9.1
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 119 RRRKRGAQKGS--GSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRR 176
R RKRG+++ S GS + + R +P+ S + E S R G
Sbjct: 376 RSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAG 435
Query: 177 SRREAAFRSPYSSTEPLCSPSESDS 201
+ +E RS +S PSES S
Sbjct: 436 TNQETRSRSRSNSKSKPNLPSESRS 460
>gi|11641413 cell division cycle 25B isoform 1 [Homo sapiens]
Length = 580
Score = 31.2 bits (69), Expect = 0.82
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 17/182 (9%)
Query: 37 ETSVGALGSLCRQFQRRLPLRTVNLNLRAGPSWKRLETPEPGQQGLQAAARSAKSALGAV 96
ET +G+L F+ R L ++L+ RA S E+ E GL + S A
Sbjct: 68 ETPKSQVGTLL--FRSRSRLTHLSLSRRASESSLSSESSESSDAGLCMDSPSPMDPHMA- 124
Query: 97 SQRIQESCQSGTKWLVETQVKARR------RKRGAQKGSGSPTHSLSQKSTRLSGAAPAH 150
Q +++ Q+ ++ + Q RR R G + T+S + R S A
Sbjct: 125 EQTFEQAIQAASRIIRNEQFAIRRFQSMPVRLLGHSPVLRNITNSQAPDGRRKSEAGSGA 184
Query: 151 SAADPWEKEHHRLSVRM--------GSHAHPLRRSRREAAFRSPYSSTEPLCSPSESDSD 202
+++ +KE+ +M +HA SRREA + P S+ + +C + +
Sbjct: 185 ASSSGEDKENDGFVFKMPWKPTHPSSTHALAEWASRREAFAQRPSSAPDLMCLSPDRKME 244
Query: 203 LE 204
+E
Sbjct: 245 VE 246
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 31.2 bits (69), Expect = 0.82
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 119 RRRKRGAQKGSGSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAHPLRRSR 178
RRR+R + SGS + S S +S P +++ P R + R+ A P RR
Sbjct: 346 RRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPP------RKTRRLSPSASPPRRRH 399
Query: 179 REAAFRSPYSSTEPLCSPSESD 200
R + +P T +P +S+
Sbjct: 400 RPSPPATPPPKTRHSPTPQQSN 421
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 30.4 bits (67), Expect = 1.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 79 QQGLQAAARSAKSALGAVSQRIQESCQSGTKWLVETQVKARRRKRGAQKGSGSPTHS 135
Q+GLQ R++K+ + I+E V + +R+RKR + GS +PT S
Sbjct: 1411 QRGLQFCTRASKAIEEGTLEEIEEE--------VRQKKSSRKRKRDSDAGSSTPTTS 1459
>gi|169210203 PREDICTED: hypothetical protein [Homo sapiens]
Length = 99
Score = 30.4 bits (67), Expect = 1.4
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 119 RRRKRGAQKGS-GSPTHSLSQKSTRLSGAAPAHSAADPWEKEHHRLSVRMGSHAH----- 172
RR +RG ++ G+PT L G AH A P +++ +V HAH
Sbjct: 3 RRERRGEREADEGAPTS--------LPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATAS 54
Query: 173 PLRRSRREAAFRSPYSSTEPLCSPSESDSDLEPVGAG 209
P S R AA + ++ +E P + + + AG
Sbjct: 55 PPPGSARRAATVARHAGSERRGRPRRAWGERRVLSAG 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.124 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,457,907
Number of Sequences: 37866
Number of extensions: 424142
Number of successful extensions: 1576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 1529
Number of HSP's gapped (non-prelim): 141
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.