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Search of human proteins with 94536800
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94536800 empty spiracles homolog 1 [Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94536800 empty spiracles homolog 1 [Homo sapiens] 595 e-170
gi|14149611 empty spiracles homeobox 2 [Homo sapiens] 312 3e-85
gi|89257348 homeo box HB9 [Homo sapiens] 98 7e-21
gi|118582284 msh homeobox 1 [Homo sapiens] 84 1e-16
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 84 1e-16
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 82 7e-16
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 81 9e-16
gi|7110735 ventral anterior homeobox 2 [Homo sapiens] 80 2e-15
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] 79 4e-15
gi|126090909 engrailed homeobox 1 [Homo sapiens] 79 5e-15
gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 79 5e-15
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 78 8e-15
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi... 78 8e-15
gi|7710121 engrailed homeobox 2 [Homo sapiens] 78 1e-14
gi|14149728 BarH-like homeobox 1 [Homo sapiens] 77 2e-14
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 77 2e-14
gi|148613882 homeobox A4 [Homo sapiens] 76 4e-14
gi|147901462 brain specific homeobox [Homo sapiens] 76 4e-14
gi|4504465 homeobox B2 [Homo sapiens] 76 4e-14
gi|226437602 NK1 homeobox 2 [Homo sapiens] 75 5e-14
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 75 5e-14
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 75 5e-14
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 75 5e-14
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 75 5e-14
gi|4758168 distal-less homeobox 2 [Homo sapiens] 74 2e-13
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 74 2e-13
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 74 2e-13
gi|153218470 BarH-like homeobox 1 [Homo sapiens] 74 2e-13
gi|197333837 notochord homeobox [Homo sapiens] 74 2e-13
gi|5031761 homeobox A1 isoform a [Homo sapiens] 73 3e-13
>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
Length = 290
Score = 595 bits (1534), Expect = e-170
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MCLAGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTG 60
MCLAGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTG
Sbjct: 1 MCLAGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTG 60
Query: 61 GGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFP 120
GGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFP
Sbjct: 61 GGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFP 120
Query: 121 EAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQD 180
EAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQD
Sbjct: 121 EAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQD 180
Query: 181 GLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWF 240
GLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWF
Sbjct: 181 GLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWF 240
Query: 241 QNRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGEDIDVTSND 290
QNRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGEDIDVTSND
Sbjct: 241 QNRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGEDIDVTSND 290
>gi|14149611 empty spiracles homeobox 2 [Homo sapiens]
Length = 252
Score = 312 bits (799), Expect = 3e-85
Identities = 168/267 (62%), Positives = 195/267 (73%), Gaps = 25/267 (9%)
Query: 34 MFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEA 93
MFQPA KR FTIESLVAKD L A+ SE+P+RP AL+Y + S
Sbjct: 1 MFQPAPKRCFTIESLVAKDSP--------------LPASRSEDPIRPAALSYANSSPINP 46
Query: 94 AFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHP---ALTVHPA---HQLGASPL---QPP 144
F++GF +AAAA AGR +Y P+LVF EA++HP A+ VHP H L A PL P
Sbjct: 47 -FLNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSP 105
Query: 145 HSFFGAQHRDPLHFYPWVL-RNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAFSPSQ 203
H F +Q RDP FYPW++ R R+ GHRFQ +D + LLH ARKPKRIRTAFSPSQ
Sbjct: 106 HPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQ 165
Query: 204 LLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKK 263
LLRLE AFEKNHYVVGAERKQLA SLSL+ETQVKVWFQNRRTK+KRQKLEEEG +S+QKK
Sbjct: 166 LLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKK 225
Query: 264 KGSHHINRWRIATKQANGEDIDVTSND 290
KG+HHINRWRIATKQA+ E+IDVTS+D
Sbjct: 226 KGTHHINRWRIATKQASPEEIDVTSDD 252
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 98.2 bits (243), Expect = 7e-21
Identities = 92/273 (33%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 6 CTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAG 65
C+P + P A P RL +P+ + AA + GG GGGTGGG G
Sbjct: 58 CSPASSEPP---AAPADRLRAESPSPPRLL--AAHCALLPKPGFLGAGGGGGGTGGGHGG 112
Query: 66 SH---------LLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPE 116
H AAAA+ AL HP A+ +G PA AA G +YG
Sbjct: 113 PHHHAHPGAAAAAAAAAAAAAAGGLALGL-HPGGAQGG--AGLPAQAAL-YGHPVYGYSA 168
Query: 117 LVFPEAM--NHPALTVHPAHQLGASPLQPPHSF-FGAQHRDPLHFYPWVLRNRFFGHRFQ 173
A+ HPAL+ GA P P GA W LR G
Sbjct: 169 AAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGA---GTFQLDQW-LRASTAG--MI 222
Query: 174 ASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSE 233
+P K +R RTAF+ QLL LE F+ N Y+ +R ++A SL L+E
Sbjct: 223 LPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTE 282
Query: 234 TQVKVWFQNRRTKYKR-QKLEEEGPESEQKKKG 265
TQVK+WFQNRR K+KR +K +E+ + +K+KG
Sbjct: 283 TQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKG 315
>gi|118582284 msh homeobox 1 [Homo sapiens]
Length = 303
Score = 84.3 bits (207), Expect = 1e-16
Identities = 78/236 (33%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 28 APAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPT------ 81
APAA P + +S K G G G A + A A EE +P
Sbjct: 2 APAADMTSLPLGVK--VEDSAFGKPAGGGAGQAPSAAAATAAAMGADEEGAKPKVSPSLL 59
Query: 82 -----ALNYPH--PSAAEAAFVSGFPAAAAAGAGRSLYGGP-ELVFPEAMNHPALTVHPA 133
AL H P A E+A AA G+ + L P L P+A + P H
Sbjct: 60 PFSVEALMADHRKPGAKESALAPSEGVQAAGGSAQPLGVPPGSLGAPDAPSSPRPLGH-- 117
Query: 134 HQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPK 193
+G P + A+ + PW+ RF + P L H RKP
Sbjct: 118 FSVGGLLKLPEDALVKAESPEKPERTPWMQSPRFSPPPARRLSPPACTLRKHKT-NRKP- 175
Query: 194 RIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKR 249
RT F+ +QLL LER F + Y+ AER + + SLSL+ETQVK+WFQNRR K KR
Sbjct: 176 --RTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 229
Score = 31.2 bits (69), Expect = 1.1
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 73 ASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYG 113
A E L+ A P+A +F G PAA AA AG SLYG
Sbjct: 233 AELEKLKMAAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYG 273
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 84.3 bits (207), Expect = 1e-16
Identities = 69/218 (31%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 53 GGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLY 112
GG GG GGGGA S + + P P + G A +AAG R
Sbjct: 80 GGPGGPAGGGGACS--MGPLTGSYNVNMALAGGPGPGGGGGSS-GGAGALSAAGVIRVPA 136
Query: 113 GGPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNR------ 166
P A+ HP + + P P G + L F PW+ NR
Sbjct: 137 HRP---LAGAVAHPQPLATGLPTVPSVPAMP-----GVNNLTGLTF-PWMESNRRYTKDR 187
Query: 167 FFGHRFQASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLA 226
F GH +Q P K K+ RT+F+ Q+ LE+ F + Y+ AER LA
Sbjct: 188 FTGHPYQNRTPP------------KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALA 235
Query: 227 GSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKK 264
+L +++ QVK WFQNRRTK++RQ EE E +Q +
Sbjct: 236 KALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANR 273
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 81.6 bits (200), Expect = 7e-16
Identities = 74/226 (32%), Positives = 97/226 (42%), Gaps = 43/226 (19%)
Query: 53 GGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLY 112
GG G G GG G G + AF G+ A+ G SL
Sbjct: 33 GGLGLGRGGQGHGEN-------------------------GAFSGGYHGASGYGPAGSLA 67
Query: 113 G-------GPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRN 165
GP V + P PA G +P P S G +PW+
Sbjct: 68 PLPGSSGVGPGGVIRVPAHRPLPVPPPA---GGAPAVPGPSGLGGAGGLAGLTFPWMDSG 124
Query: 166 RFFGH-RFQASDVPQDGLLLHG-PFAR----KPKRIRTAFSPSQLLRLERAFEKNHYVVG 219
R F R A+ P G G P+ K K+ RT+FS SQ+L LER F + Y+
Sbjct: 125 RRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLAS 184
Query: 220 AERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKG 265
AER LA +L +++ QVK WFQNRRTK++RQ EE E+E+ + G
Sbjct: 185 AERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEER--EAERHRAG 228
>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
Length = 334
Score = 81.3 bits (199), Expect = 9e-16
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Query: 191 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQ 250
+PKR RT+F+ QL RLE F++ YVVG ER +LA L+LSETQVKVWFQNRRTK K+
Sbjct: 99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 251 KLEEEGPESE 260
++G +SE
Sbjct: 158 ---DQGKDSE 164
>gi|7110735 ventral anterior homeobox 2 [Homo sapiens]
Length = 290
Score = 80.5 bits (197), Expect = 2e-15
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 191 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQ 250
+PKR RT+F+ QL RLE F++ YVVG ER +LA L+LSETQVKVWFQNRRTK K+
Sbjct: 101 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 160
Query: 251 K---LEEEGPESEQKKKGSHHINR 271
+ LE+ S + + +I R
Sbjct: 161 QSRDLEKRASSSASEAFATSNILR 184
>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
Length = 291
Score = 79.3 bits (194), Expect = 4e-15
Identities = 71/246 (28%), Positives = 101/246 (41%), Gaps = 19/246 (7%)
Query: 28 APAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPH 87
APA+A P F I+ ++ G G+ L P YP
Sbjct: 3 APASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRP----GATYPS 58
Query: 88 PSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQ-LGASPLQPPHS 146
A+ A + F A + SL + P P P L A P P S
Sbjct: 59 LPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVS 118
Query: 147 FFGAQHRDPLHFYPWVLRNR-FFGHRFQASDVPQDGLL---LHGPFAR----KPKRIRTA 198
G + +PW+ +R F RF A+ + + P+ K K+ RT+
Sbjct: 119 SLGGLN------FPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTS 172
Query: 199 FSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPE 258
FS Q+ LE+ F + Y+ AER LA SL +++ QVK WFQNRRTK++RQ EE E
Sbjct: 173 FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAE 232
Query: 259 SEQKKK 264
+Q +
Sbjct: 233 RQQASR 238
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 79.0 bits (193), Expect = 5e-15
Identities = 79/290 (27%), Positives = 112/290 (38%), Gaps = 60/290 (20%)
Query: 8 PRKAAAPGRGALPRARLPRTAPAAA-TMFQP--AAKRGFTIESLVAKDGGTGGGTGGGGA 64
P+ AAP P A+L RT + +P K+ L+ GG GGG
Sbjct: 83 PQHLAAPAHQPQPAAQLHRTTNFFIDNILRPDFGCKKEQPPPQLLVAAAARGGAGGGGRV 142
Query: 65 GSHLLAAAASEEPLRPTALNYP--------------------------------HPSAAE 92
AA +P+ P P +P+AA
Sbjct: 143 ERDRGQTAAGRDPVHPLGTRAPGAASLLCAPDANCGPPDGSQPAAAGAGASKAGNPAAAA 202
Query: 93 AAFVSGFPAAAAA-------------GAGRSLYGGPELVFPEAMNHPALTVHPAHQLGAS 139
AA + AAAAA G G G +PE N L + A+
Sbjct: 203 AAAAAAVAAAAAAAAAKPSDTGGGGSGGGAGSPGAQGTKYPEHGNPAILLMGSAN---GG 259
Query: 140 PLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAF 199
P+ S + PL + WV R+ + S P+ L ++ KR RTAF
Sbjct: 260 PVVKTDS------QQPLVWPAWVYCTRYSD---RPSSGPRTRKLKKKKNEKEDKRPRTAF 310
Query: 200 SPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKR 249
+ QL RL+ F+ N Y+ R+ LA LSL+E+Q+K+WFQN+R K K+
Sbjct: 311 TAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIKK 360
>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
Length = 270
Score = 79.0 bits (193), Expect = 5e-15
Identities = 72/238 (30%), Positives = 103/238 (43%), Gaps = 22/238 (9%)
Query: 58 GTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPEL 117
G G G L A +P PT A + P + + + P
Sbjct: 7 GPAAGAVGVPLYAPTPLLQPAHPTPFYIEDILGRGPAAPTPAPTLPSPNSSFTSLVSPYR 66
Query: 118 --VFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQAS 175
V+ HPA + H A L A+ P F G PL+ +P + + + H
Sbjct: 67 TPVYEPTPIHPAFSHHSAAALAAA--YGPGGFGG-----PLYPFPRTVND--YTHALLRH 117
Query: 176 DVPQDGLLLHGPFARKPKRIRTA----FSPSQLLRLERAFEKNHYVVGAERKQLAGSLSL 231
D P LL PF ++P R FS Q + LE+ FE Y+ ERK+LA L L
Sbjct: 118 D-PLGKPLLWSPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQL 176
Query: 232 SETQVKVWFQNRRTKYKRQKLEEEGPESEQKKK----GSHHINRWRIATKQANGEDID 285
SE QVK WFQNRR K++R L++E P+S +K++ S R + ++Q G +D
Sbjct: 177 SERQVKTWFQNRRAKWRR--LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLD 232
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 78.2 bits (191), Expect = 8e-15
Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 18/234 (7%)
Query: 69 LAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRS------LYGGPELV-FPE 121
+A+ A+ P+ + S+A A+ S AAAAA A + L G P
Sbjct: 109 VASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSP 168
Query: 122 AMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDG 181
P L P+ A+ + P R P+ F+P V+++ + A Q
Sbjct: 169 PPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPI-FWPGVMQSPPWRDARLACTPHQGS 227
Query: 182 LLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQ 241
+LL RK R FS Q+ LE+ FE+ Y+ G ER +LA SL ++E+QVKVWFQ
Sbjct: 228 ILLDKDGKRK--HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQ 285
Query: 242 NRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGED-----IDVTSND 290
NRRTK++++ E + KKK R + A++ +D +D S+D
Sbjct: 286 NRRTKWRKKHAAE---MATAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDD 336
>gi|28912912 NK6 transcription factor related, locus 2 [Homo
sapiens]
Length = 277
Score = 78.2 bits (191), Expect = 8e-15
Identities = 78/277 (28%), Positives = 107/277 (38%), Gaps = 40/277 (14%)
Query: 20 PRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPL- 78
P A + +AP AA K +L G GG GA L + L
Sbjct: 6 PGAFVLSSAPLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGISDILG 65
Query: 79 RPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGA 138
RP AA + G P + +Y GP P A G
Sbjct: 66 RPVG-------AAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPL-----AELPGR 113
Query: 139 SPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTA 198
P+ P GA RDP R G + +DG K K R
Sbjct: 114 PPIFWPGVVQGAPWRDP----------RLAGPAPAGGVLDKDG---------KKKHSRPT 154
Query: 199 FSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPE 258
FS Q+ LE+ FE+ Y+ G ER +LA SL ++E+QVKVWFQNRRTK++++ E
Sbjct: 155 FSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAE---M 211
Query: 259 SEQKKKGSHHINRWRIATKQANGED-----IDVTSND 290
+ KKK + ++ A +D +D S+D
Sbjct: 212 ASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD 248
>gi|7710121 engrailed homeobox 2 [Homo sapiens]
Length = 333
Score = 77.8 bits (190), Expect = 1e-14
Identities = 69/209 (33%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 52 DGGTGGGTGGGGA-GSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGR- 109
+GG G GGGGA GS L + S EP R P A S P G+
Sbjct: 103 EGGASGAEGGGGAGGSEQLLGSGSREP-RQNPPCAPGAGGPLPAAGSDSPGDGEGGSKTL 161
Query: 110 SLYGGPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQ-----HRDPLHFYPWVLR 164
SL+GG + P A LG L +Q P+ + WV
Sbjct: 162 SLHGGAKK--GGDPGGPLDGSLKARGLGGGDLSVSSDSDSSQAGANLGAQPMLWPAWVYC 219
Query: 165 NRFFGHRFQASDVPQDGLLLHGPFARKP----KRIRTAFSPSQLLRLERAFEKNHYVVGA 220
R+ SD P G P + P KR RTAF+ QL RL+ F+ N Y+
Sbjct: 220 TRY-------SDRPSSGPRSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQ 272
Query: 221 ERKQLAGSLSLSETQVKVWFQNRRTKYKR 249
R+ LA LSL+E+Q+K+WFQN+R K K+
Sbjct: 273 RRQSLAQELSLNESQIKIWFQNKRAKIKK 301
>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
Length = 327
Score = 76.6 bits (187), Expect = 2e-14
Identities = 34/61 (55%), Positives = 49/61 (80%)
Query: 190 RKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKR 249
+KP++ RTAF+ QL +LER+FE+ Y+ +R +LA SL+L++TQVK W+QNRRTK+KR
Sbjct: 176 KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKR 235
Query: 250 Q 250
Q
Sbjct: 236 Q 236
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 76.6 bits (187), Expect = 2e-14
Identities = 35/62 (56%), Positives = 49/62 (79%)
Query: 189 ARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYK 248
A+KP++ RTAFS QL +LER+FE+ Y+ +R LA +L+L++TQVK W+QNRRTK+K
Sbjct: 229 AKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 288
Query: 249 RQ 250
RQ
Sbjct: 289 RQ 290
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 75.9 bits (185), Expect = 4e-14
Identities = 74/265 (27%), Positives = 101/265 (38%), Gaps = 92/265 (34%)
Query: 52 DGGTGGGTG----------------------GGGAG--SHLLAAAASEEPLRPTALNYPH 87
DGG GGG G GGG + A + EP P A YP
Sbjct: 33 DGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTAREPAYPAAALYPA 92
Query: 88 PSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGAS-------- 139
AA+ A+ G+ A+ G P+ PA PAH L AS
Sbjct: 93 HGAADTAYPYGYRGGASPGRP-----------PQPEQPPAQAKGPAHGLHASHVLQPQLP 141
Query: 140 -PLQP----------------------------------PHSFFGAQHRDPLHFYPWVLR 164
PLQP S G + ++P+ YPW+ +
Sbjct: 142 PPLQPRAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPV-VYPWMKK 200
Query: 165 NRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQ 224
A + +G +PKR RTA++ Q+L LE+ F N Y+ R +
Sbjct: 201 IHV-----SAVNPSYNG--------GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIE 247
Query: 225 LAGSLSLSETQVKVWFQNRRTKYKR 249
+A +L LSE QVK+WFQNRR K+K+
Sbjct: 248 IAHTLCLSERQVKIWFQNRRMKWKK 272
>gi|147901462 brain specific homeobox [Homo sapiens]
Length = 233
Score = 75.9 bits (185), Expect = 4e-14
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 23/141 (16%)
Query: 140 PLQPPHSFFGAQHRDPLH----FYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKP--- 192
PL P + PLH +P+ L S +P L H A P
Sbjct: 57 PLMPTPTLLAPHAHHPLHKGDHHHPYFLTT---------SGMPVPALFPHPQHAELPGKH 107
Query: 193 ---KRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKR 249
++ RT FS SQL LE+ FE Y+ ER +LA +LSLSETQVK WFQNRR K+K+
Sbjct: 108 CRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKK 167
Query: 250 Q----KLEEEGPESEQKKKGS 266
Q + E + P+ + +GS
Sbjct: 168 QLRKSQDEPKAPDGPESPEGS 188
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 75.9 bits (185), Expect = 4e-14
Identities = 61/196 (31%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 86 PHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGASPLQPPH 145
P P E F S P A+ RS A + PAL P L A+P P
Sbjct: 44 PPPPPFEQTFPSLQPGASTLQRPRSQ--------KRAEDGPALPPPPPPPLPAAPPAPE- 94
Query: 146 SFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQ---------------DGLLLHGPFAR 190
+PW+ + Q++ P DGL L
Sbjct: 95 -------------FPWMKEKKSAKKPSQSATSPSPAASAVPASGVGSPADGLGLPEAGGG 141
Query: 191 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQ 250
+R+RTA++ +QLL LE+ F N Y+ R ++A L L+E QVKVWFQNRR K+KRQ
Sbjct: 142 GARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 201
Query: 251 KLEEEGPESEQKKKGS 266
E P+ E G+
Sbjct: 202 TQHREPPDGEPACPGA 217
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 75.5 bits (184), Expect = 5e-14
Identities = 38/70 (54%), Positives = 47/70 (67%)
Query: 187 PFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTK 246
P KP+R RTAF+ QL+ LE F Y+ ER LA SLSL+ETQVK+WFQNRRTK
Sbjct: 158 PNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 217
Query: 247 YKRQKLEEEG 256
+K+Q +G
Sbjct: 218 WKKQNPGADG 227
Score = 29.3 bits (64), Expect = 4.2
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 37 PAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALN---YPHPSAAEA 93
P A + + G GGG GGG G S P AL+ +P SAA
Sbjct: 223 PGADGAAQVGGGAPQPGAAGGGGGGGSGG--------SPGPPGTGALHFQTFPSYSAANV 274
Query: 94 AFVS--GFP-AAAAAGAGRSLYGGPELVFP 120
F S FP AAA G+ + + GP + P
Sbjct: 275 LFPSAASFPLTAAAPGSPFAPFLGPSYLTP 304
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 75.5 bits (184), Expect = 5e-14
Identities = 38/70 (54%), Positives = 47/70 (67%)
Query: 187 PFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTK 246
P KP+R RTAF+ QL+ LE F Y+ ER LA SLSL+ETQVK+WFQNRRTK
Sbjct: 180 PNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 239
Query: 247 YKRQKLEEEG 256
+K+Q +G
Sbjct: 240 WKKQNPGADG 249
Score = 29.3 bits (64), Expect = 4.2
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 37 PAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALN---YPHPSAAEA 93
P A + + G GGG GGG G S P AL+ +P SAA
Sbjct: 245 PGADGAAQVGGGAPQPGAAGGGGGGGSGG--------SPGPPGTGALHFQTFPSYSAANV 296
Query: 94 AFVS--GFP-AAAAAGAGRSLYGGPELVFP 120
F S FP AAA G+ + + GP + P
Sbjct: 297 LFPSAASFPLTAAAPGSPFAPFLGPSYLTP 326
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 75.5 bits (184), Expect = 5e-14
Identities = 82/254 (32%), Positives = 102/254 (40%), Gaps = 23/254 (9%)
Query: 4 AGCTPRKAAAPGRGALPRAR-LPRTAPAAATMFQPAAKR----GFTIESLVAKDGGTGGG 58
A C P AA+ G PRA L R A A A A G ++ A+ T G
Sbjct: 483 APCAPAPAAS---GRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGY 539
Query: 59 TGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELV 118
+ GGG H +A + +E P + A E G A G G G
Sbjct: 540 SSGGGG--HSPSADSGDEV--PDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQG 595
Query: 119 FPEAMNHPALTVHPAHQLGASPLQP--PHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASD 176
E P TV A G P P GA P R +
Sbjct: 596 AAETDASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGS 655
Query: 177 VPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQV 236
+ G KP+R RTAF+ QL+ LE F+ Y+ ER LA SLSL+ETQV
Sbjct: 656 DSKSG---------KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQV 706
Query: 237 KVWFQNRRTKYKRQ 250
K+WFQNRRTK+K+Q
Sbjct: 707 KIWFQNRRTKWKKQ 720
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 75.5 bits (184), Expect = 5e-14
Identities = 38/70 (54%), Positives = 47/70 (67%)
Query: 187 PFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTK 246
P KP+R RTAF+ QL+ LE F Y+ ER LA SLSL+ETQVK+WFQNRRTK
Sbjct: 180 PNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 239
Query: 247 YKRQKLEEEG 256
+K+Q +G
Sbjct: 240 WKKQNPGADG 249
Score = 29.3 bits (64), Expect = 4.2
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 37 PAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALN---YPHPSAAEA 93
P A + + G GGG GGG G S P AL+ +P SAA
Sbjct: 245 PGADGAAQVGGGAPQPGAAGGGGGGGSGG--------SPGPPGTGALHFQTFPSYSAANV 296
Query: 94 AFVS--GFP-AAAAAGAGRSLYGGPELVFP 120
F S FP AAA G+ + + GP + P
Sbjct: 297 LFPSAASFPLTAAAPGSPFAPFLGPSYLTP 326
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 75.5 bits (184), Expect = 5e-14
Identities = 38/70 (54%), Positives = 47/70 (67%)
Query: 187 PFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTK 246
P KP+R RTAF+ QL+ LE F Y+ ER LA SLSL+ETQVK+WFQNRRTK
Sbjct: 180 PNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 239
Query: 247 YKRQKLEEEG 256
+K+Q +G
Sbjct: 240 WKKQNPGADG 249
Score = 29.3 bits (64), Expect = 4.2
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 37 PAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALN---YPHPSAAEA 93
P A + + G GGG GGG G S P AL+ +P SAA
Sbjct: 245 PGADGAAQVGGGAPQPGAAGGGGGGGSGG--------SPGPPGTGALHFQTFPSYSAANV 296
Query: 94 AFVS--GFP-AAAAAGAGRSLYGGPELVFP 120
F S FP AAA G+ + + GP + P
Sbjct: 297 LFPSAASFPLTAAAPGSPFAPFLGPSYLTP 326
>gi|4758168 distal-less homeobox 2 [Homo sapiens]
Length = 328
Score = 73.9 bits (180), Expect = 2e-13
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 55 TGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSG--FPAAAAAGAGRSL- 111
+GGG G GG S ++++ +P L P +A ++++ + PA G G
Sbjct: 31 SGGGAGPGGNSS---SSSSLHKPQESPTL--PVSTATDSSYYTNQQHPAGGGGGGGSPYA 85
Query: 112 YGGPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHR 171
+ G +N+ + ++ LG + ++ +G P + P
Sbjct: 86 HMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYAPYGTSS-SPANNEP----------- 133
Query: 172 FQASDVPQDGLLLHGPFARKPKRIR---TAFSPSQLLRLERAFEKNHYVVGAERKQLAGS 228
+ D+ + +++G KPK++R T +S QL L+R F+K Y+ ER +LA S
Sbjct: 134 -EKEDLEPEIRIVNG----KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAAS 188
Query: 229 LSLSETQVKVWFQNRRTKYKRQKLEEEGPESE 260
L L++TQVK+WFQNRR+K+K+ E P +
Sbjct: 189 LGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQ 220
Score = 30.4 bits (67), Expect = 1.9
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 29/122 (23%)
Query: 17 GALPRARLPRTA---PAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAA 73
G +P + P + P A+ A F + +A GG G G+GG GAGS
Sbjct: 214 GEIPSEQHPGASASPPCASPPVSAPASWDFGVPQRMA--GGGGPGSGGSGAGS------- 264
Query: 74 SEEPLRPTALNYPHPSAAEAAFVSGFP-AAAAAGAGRSLYGGPELVFPEAMNHPALTVHP 132
+ PS+A +AF+ +P +G+ L L+ HP T P
Sbjct: 265 ----------SGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL------HPTQTPQP 308
Query: 133 AH 134
H
Sbjct: 309 HH 310
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 73.9 bits (180), Expect = 2e-13
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 191 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQ 250
KP+R RTAF+ QL+ LE F+ Y+ ER LA SLSL+ETQVK+WFQNRRTK+K+Q
Sbjct: 96 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 155
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 73.9 bits (180), Expect = 2e-13
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 191 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQ 250
KP+R RTAF+ QL+ LE F+ Y+ ER LA SLSL+ETQVK+WFQNRRTK+K+Q
Sbjct: 258 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 317
>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
Length = 254
Score = 73.9 bits (180), Expect = 2e-13
Identities = 65/186 (34%), Positives = 85/186 (45%), Gaps = 36/186 (19%)
Query: 100 PAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQ--------------------LGAS 139
PAAAAA AG L G + + H L V A Q L A
Sbjct: 46 PAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAG 105
Query: 140 PLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAF 199
P P + GA H P L+ R + +A+ + G A+K +R RT F
Sbjct: 106 PGLPGAA--GAPH------LPLELQLR---GKLEAAGPGEPGTK-----AKKGRRSRTVF 149
Query: 200 SPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPES 259
+ QL+ LE+ FEK Y+ +R LA SL LS+ QVK W+QNRR K+K+ L+ G ES
Sbjct: 150 TELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLES 209
Query: 260 EQKKKG 265
K KG
Sbjct: 210 PTKPKG 215
>gi|197333837 notochord homeobox [Homo sapiens]
Length = 251
Score = 73.6 bits (179), Expect = 2e-13
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 190 RKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKR 249
R+ KR+RT F+ QL LE+ F K H +VG +R QLA L L+E QV+VWFQNRR KY++
Sbjct: 154 RQQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLAARLKLTENQVRVWFQNRRVKYQK 213
Query: 250 QK 251
Q+
Sbjct: 214 QQ 215
>gi|5031761 homeobox A1 isoform a [Homo sapiens]
Length = 335
Score = 72.8 bits (177), Expect = 3e-13
Identities = 61/212 (28%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 77 PLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSL-------------YGGPELVFPEAM 123
P P ALN EA G+P A A +L Y G + P+ +
Sbjct: 107 PYSPYALNQ------EADVSGGYPQCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYI 160
Query: 124 NHPALTVHPAHQLGA-----SPLQPPHSFF----GAQHRDPLHFYPWVLRNRFFGHRFQA 174
+H H + L SPL H ++ P + W+ R
Sbjct: 161 HHSYGQEHQSLALATYNNSLSPLHASHQEACRSPASETSSPAQTFDWMKVKR-------- 212
Query: 175 SDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSET 234
+ P+ G + + +P +RT F+ QL LE+ F N Y+ A R ++A SL L+ET
Sbjct: 213 -NPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNET 271
Query: 235 QVKVWFQNRRTKYKRQKLEEEGPESEQKKKGS 266
QVK+WFQNRR K K+++ E P S G+
Sbjct: 272 QVKIWFQNRRMKQKKREKEGLLPISPATPPGN 303
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,323,722
Number of Sequences: 37866
Number of extensions: 738034
Number of successful extensions: 7291
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 5295
Number of HSP's gapped (non-prelim): 1497
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.