Guide to the Human Genome
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Name: DDX26B Sequence: fasta or formatted (861aa) NCBI GI: 94536743
Description:

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B

Referenced in:

DEAD / H Helicase Family
Polyadenylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         37           2
 C cysteine            1.3         11           1
 D aspartate           5.0         43           2
 E glutamate           5.6         48           2
 F phenylalanine       3.9         34           2
 G glycine             6.4         55           3
 H histidine           2.6         22           2
 I isoleucine          4.8         41           2
 K lysine              7.1         61           2
 L leucine            11.7        101           3
 M methionine          2.7         23           2
 N asparagine          4.9         42           2
 P proline             8.0         69           2
 Q glutamine           4.4         38           1
 R arginine            4.9         42           3
 S serine              7.8         67           2
 T threonine           5.9         51           2
 V valine              5.1         44           2
 W tryptophan          0.9          8           1
 Y tyrosine            2.8         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B [Ho... 
INTS6                 0.639   integrator complex subunit 6 isoform a 
INTS6                 0.626   integrator complex subunit 6 isoform b 
SAGE1                 0.116   sarcoma antigen 1 
INTS6                 0.103   integrator complex subunit 6 isoform c 
LOC644717             0.103   PREDICTED: SAGE1-like protein-like 
LOC644717             0.103   PREDICTED: SAGE1-like protein-like 
LOC644717             0.103   PREDICTED: SAGE1-like protein-like 
CT45A5                0.059   cancer/testis antigen family 45, member A5 
CT45A4                0.057   cancer/testis antigen family 45, member A4 
CT45A2                0.057   cancer/testis antigen CT45 
CT45A6                0.057   cancer/testis antigen family 45, member A6 
CT45A1                0.056   cancer/testis antigen family 45, member A1 
CT45A3                0.056   cancer/testis antigen family 45, member A3 
LOC100133581          0.055   PREDICTED: similar to integrator complex subunit 6 ...
CT45A6                0.054   PREDICTED: cancer/testis antigen family 45, member ...
KAT2A                 0.005   general control of amino acid synthesis 5-like 2 [H...
MIA3                  0.004   melanoma inhibitory activity family, member 3 [Homo...
PARG                  0.004   poly (ADP-ribose) glycohydrolase 
LOC644578             0.003   PREDICTED: similar to hCG2040199 
ERCC5                 0.003   XPG-complementing protein 
RAB11FIP1             0.003   RAB11 family interacting protein 1 isoform 3 
RAB11FIP1             0.003   RAB11 family interacting protein 1 isoform 1 
COL4A2                0.003   alpha 2 type IV collagen preproprotein 
PRR19                 0.003   proline rich 19 
LOC644578             0.003   PREDICTED: similar to hCG2040199 
LOC100293493          0.003   PREDICTED: hypothetical protein 
LOC644578             0.003   PREDICTED: similar to hCG2040199 
USP31                 0.003   ubiquitin specific peptidase 31 
FRMPD2                0.003   FERM and PDZ domain containing 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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