Guide to the Human Genome
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Name: CT45A5 Sequence: fasta or formatted (189aa) NCBI GI: 56090473
Description:

cancer/testis antigen family 45, member A5

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         13           2
 C cysteine            2.6          5           1
 D aspartate           6.3         12           2
 E glutamate           6.3         12           1
 F phenylalanine       4.2          8           2
 G glycine             7.4         14           2
 H histidine           1.1          2           1
 I isoleucine          5.8         11           2
 K lysine             11.6         22           3
 L leucine             5.3         10           2
 M methionine          4.8          9           2
 N asparagine          2.1          4           1
 P proline             4.8          9           2
 Q glutamine           5.3         10           2
 R arginine            7.4         14           2
 S serine              7.9         15           2
 T threonine           3.7          7           1
 V valine              5.3         10           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cancer/testis antigen family 45, member A5 
CT45A2                0.941   cancer/testis antigen CT45 
CT45A3                0.935   cancer/testis antigen family 45, member A3 
CT45A4                0.932   cancer/testis antigen family 45, member A4 
CT45A6                0.932   cancer/testis antigen family 45, member A6 
CT45A1                0.929   cancer/testis antigen family 45, member A1 
LOC100133581          0.895   PREDICTED: similar to integrator complex subunit 6 ...
CT45A6                0.864   PREDICTED: cancer/testis antigen family 45, member ...
DDX26B                0.288   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B [Ho...
SAGE1                 0.198   sarcoma antigen 1 
LOC644717             0.169   PREDICTED: SAGE1-like protein-like 
LOC644717             0.169   PREDICTED: SAGE1-like protein-like 
LOC644717             0.155   PREDICTED: SAGE1-like protein-like 
INTS6                 0.113   integrator complex subunit 6 isoform b 
INTS6                 0.113   integrator complex subunit 6 isoform a 
CCNB3                 0.025   cyclin B3 isoform 3 
MS4A14                0.014   membrane-spanning 4-domains, subfamily A, member 14...
MS4A14                0.014   membrane-spanning 4-domains, subfamily A, member 14...
MCM4                  0.011   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.011   minichromosome maintenance complex component 4 [Homo...
GJA9                  0.011   gap junction protein, alpha 9, 59kDa 
C7                    0.008   complement component 7 precursor 
ACTR3B                0.008   actin-related protein 3-beta isoform 1 
FAM190B               0.008   granule cell antiserum positive 14 
ACTR3                 0.008   ARP3 actin-related protein 3 homolog 
PCNX                  0.008   pecanex-like 1 
ECT2L                 0.008   epithelial cell transforming sequence 2 oncogene-li...
SPTY2D1               0.008   SPT2, Suppressor of Ty, domain containing 1 
TACC2                 0.006   transforming, acidic coiled-coil containing protein...
TACC2                 0.006   transforming, acidic coiled-coil containing protein ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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