Guide to the Human Genome
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Name: INTS6 Sequence: fasta or formatted (115aa) NCBI GI: 90193624
Description:

integrator complex subunit 6 isoform c

Referenced in:

DEAD / H Helicase Family
Polyadenylation

Other entries for this name:
alt prot [887aa] integrator complex subunit 6 isoform a
alt prot [874aa] integrator complex subunit 6 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         10           1
 C cysteine            0.0          0           0
 D aspartate           5.2          6           1
 E glutamate           5.2          6           2
 F phenylalanine       4.3          5           1
 G glycine             7.8          9           1
 H histidine           1.7          2           1
 I isoleucine          3.5          4           1
 K lysine              4.3          5           1
 L leucine            13.9         16           2
 M methionine          4.3          5           1
 N asparagine          6.1          7           1
 P proline             3.5          4           2
 Q glutamine           3.5          4           1
 R arginine            6.1          7           1
 S serine              4.3          5           1
 T threonine           9.6         11           2
 V valine              3.5          4           1
 W tryptophan          0.9          1           1
 Y tyrosine            3.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 6 isoform c 
INTS6                 0.981   integrator complex subunit 6 isoform a 
INTS6                 0.865   integrator complex subunit 6 isoform b 
DDX26B                0.855   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B [Ho...
RAB11FIP1             0.029   RAB11 family interacting protein 1 isoform 3 
RAB11FIP1             0.029   RAB11 family interacting protein 1 isoform 1 
ATF7IP                0.014   activating transcription factor 7 interacting protei...
ZBTB40                0.010   zinc finger and BTB domain containing 40 
ZBTB40                0.010   zinc finger and BTB domain containing 40 
MED1                  0.010   mediator complex subunit 1 
CYP26B1               0.010   cytochrome P450, family 26, subfamily b, polypeptide ...
ATP8B2                0.005   ATPase, class I, type 8B, member 2 isoform a 
ATP8B2                0.005   ATPase, class I, type 8B, member 2 isoform b 
INA                   0.005   internexin neuronal intermediate filament protein, a...
CYP26C1               0.005   cytochrome P450, family 26, subfamily C, polypeptide...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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