Guide to the Human Genome
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Search of human proteins with 93352556

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|93352556 rhomboid, veinlet-like 6 isoform 1 [Homo sapiens]
         (856 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|93352556 rhomboid, veinlet-like 6 isoform 1 [Homo sapiens]        1776   0.0  
gi|93352558 rhomboid, veinlet-like 6 isoform 2 [Homo sapiens]        1698   0.0  
gi|190341097 rhomboid family 1 [Homo sapiens]                         965   0.0  
gi|54144654 rhomboid protease 2 [Homo sapiens]                         55   3e-07
gi|21264326 rhomboid protease 3 [Homo sapiens]                         54   8e-07
gi|4506525 rhomboid protease 1 [Homo sapiens]                          43   0.001
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         42   0.002
gi|150418009 transforming, acidic coiled-coil containing protein...    37   0.10 
gi|45827755 transforming, acidic coiled-coil containing protein ...    37   0.10 
gi|45827753 transforming, acidic coiled-coil containing protein ...    37   0.10 
gi|11119414 transforming, acidic coiled-coil containing protein ...    37   0.10 
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]           36   0.17 
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]           36   0.17 
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]           36   0.17 
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             34   0.66 
gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens]           33   1.1  
gi|31317292 Smad ubiquitination regulatory factor 1 isoform 1 [H...    33   1.5  
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]            33   1.5  
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]           33   1.5  
gi|65301141 PH domain and leucine rich repeat protein phosphatas...    32   1.9  
gi|121949815 placenta-specific 4 [Homo sapiens]                        32   2.5  
gi|38372909 jumonji domain containing 1B [Homo sapiens]                32   3.3  
gi|148833508 notch1 preproprotein [Homo sapiens]                       31   4.3  
gi|168693643 decay accelerating factor for complement isoform 2 ...    31   4.3  
gi|10835143 decay accelerating factor for complement isoform 1 p...    31   4.3  
gi|28557777 immunoglobulin-like domain containing receptor 1 [Ho...    31   4.3  
gi|223671872 inhibitor of kappa light polypeptide gene enhancer ...    31   5.6  
gi|223671870 inhibitor of kappa light polypeptide gene enhancer ...    31   5.6  
gi|4504631 inhibitor of kappa light polypeptide gene enhancer in...    31   5.6  
gi|153792133 inhibitor of kappa light polypeptide gene enhancer ...    31   5.6  

>gi|93352556 rhomboid, veinlet-like 6 isoform 1 [Homo sapiens]
          Length = 856

 Score = 1776 bits (4600), Expect = 0.0
 Identities = 856/856 (100%), Positives = 856/856 (100%)

Query: 1   MASADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKS 60
           MASADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKS
Sbjct: 1   MASADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKS 60

Query: 61  QPRTWASHTTACPPSFLPKRKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK 120
           QPRTWASHTTACPPSFLPKRKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK
Sbjct: 61  QPRTWASHTTACPPSFLPKRKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK 120

Query: 121 GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP 180
           GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP
Sbjct: 121 GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP 180

Query: 181 CKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRRKRMSV 240
           CKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRRKRMSV
Sbjct: 181 CKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRRKRMSV 240

Query: 241 AHMSLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKEEMS 300
           AHMSLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKEEMS
Sbjct: 241 AHMSLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKEEMS 300

Query: 301 SMPDDVFESPPLSASYFRGIPHSASPVSPDGVQIPLKEYGRAPVPGPRRGKRIASKVKHF 360
           SMPDDVFESPPLSASYFRGIPHSASPVSPDGVQIPLKEYGRAPVPGPRRGKRIASKVKHF
Sbjct: 301 SMPDDVFESPPLSASYFRGIPHSASPVSPDGVQIPLKEYGRAPVPGPRRGKRIASKVKHF 360

Query: 361 AFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHVIITLLVI 420
           AFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHVIITLLVI
Sbjct: 361 AFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHVIITLLVI 420

Query: 421 CTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPSSIDLIHLGAKFSPCIRKD 480
           CTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPSSIDLIHLGAKFSPCIRKD
Sbjct: 421 CTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPSSIDLIHLGAKFSPCIRKD 480

Query: 481 GQIEQLVLRERDLERDSGCCVQNDHSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLG 540
           GQIEQLVLRERDLERDSGCCVQNDHSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLG
Sbjct: 481 GQIEQLVLRERDLERDSGCCVQNDHSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLG 540

Query: 541 QKRTSGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHMDCEIKGRPC 600
           QKRTSGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHMDCEIKGRPC
Sbjct: 541 QKRTSGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHMDCEIKGRPC 600

Query: 601 CIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLS 660
           CIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLS
Sbjct: 601 CIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLS 660

Query: 661 LFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGP 720
           LFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGP
Sbjct: 661 LFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGP 720

Query: 721 AGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSG 780
           AGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSG
Sbjct: 721 AGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSG 780

Query: 781 LLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPINWPWIEHLTCFP 840
           LLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPINWPWIEHLTCFP
Sbjct: 781 LLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPINWPWIEHLTCFP 840

Query: 841 FTSRFCEKYELDQVLH 856
           FTSRFCEKYELDQVLH
Sbjct: 841 FTSRFCEKYELDQVLH 856


>gi|93352558 rhomboid, veinlet-like 6 isoform 2 [Homo sapiens]
          Length = 827

 Score = 1698 bits (4397), Expect = 0.0
 Identities = 827/856 (96%), Positives = 827/856 (96%), Gaps = 29/856 (3%)

Query: 1   MASADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKS 60
           MASADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPE          
Sbjct: 1   MASADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPE---------- 50

Query: 61  QPRTWASHTTACPPSFLPKRKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK 120
                              RKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK
Sbjct: 51  -------------------RKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK 91

Query: 121 GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP 180
           GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP
Sbjct: 92  GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP 151

Query: 181 CKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRRKRMSV 240
           CKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRRKRMSV
Sbjct: 152 CKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRRKRMSV 211

Query: 241 AHMSLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKEEMS 300
           AHMSLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKEEMS
Sbjct: 212 AHMSLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKEEMS 271

Query: 301 SMPDDVFESPPLSASYFRGIPHSASPVSPDGVQIPLKEYGRAPVPGPRRGKRIASKVKHF 360
           SMPDDVFESPPLSASYFRGIPHSASPVSPDGVQIPLKEYGRAPVPGPRRGKRIASKVKHF
Sbjct: 272 SMPDDVFESPPLSASYFRGIPHSASPVSPDGVQIPLKEYGRAPVPGPRRGKRIASKVKHF 331

Query: 361 AFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHVIITLLVI 420
           AFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHVIITLLVI
Sbjct: 332 AFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHVIITLLVI 391

Query: 421 CTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPSSIDLIHLGAKFSPCIRKD 480
           CTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPSSIDLIHLGAKFSPCIRKD
Sbjct: 392 CTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPSSIDLIHLGAKFSPCIRKD 451

Query: 481 GQIEQLVLRERDLERDSGCCVQNDHSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLG 540
           GQIEQLVLRERDLERDSGCCVQNDHSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLG
Sbjct: 452 GQIEQLVLRERDLERDSGCCVQNDHSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLG 511

Query: 541 QKRTSGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHMDCEIKGRPC 600
           QKRTSGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHMDCEIKGRPC
Sbjct: 512 QKRTSGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHMDCEIKGRPC 571

Query: 601 CIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLS 660
           CIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLS
Sbjct: 572 CIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLS 631

Query: 661 LFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGP 720
           LFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGP
Sbjct: 632 LFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGP 691

Query: 721 AGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSG 780
           AGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSG
Sbjct: 692 AGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSG 751

Query: 781 LLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPINWPWIEHLTCFP 840
           LLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPINWPWIEHLTCFP
Sbjct: 752 LLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPINWPWIEHLTCFP 811

Query: 841 FTSRFCEKYELDQVLH 856
           FTSRFCEKYELDQVLH
Sbjct: 812 FTSRFCEKYELDQVLH 827


>gi|190341097 rhomboid family 1 [Homo sapiens]
          Length = 855

 Score =  965 bits (2495), Expect = 0.0
 Identities = 500/887 (56%), Positives = 607/887 (68%), Gaps = 84/887 (9%)

Query: 15  SSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKSQPRTWASHTTACPP 74
           S+S LQ +KPP L + IP             S +P                    TA  P
Sbjct: 8   STSSLQRKKPPWLKLDIP-------------SAVP-------------------LTAEEP 35

Query: 75  SFLPKRKNPAYLKSVSLQEPRSRWQESSE--KRPGFRRQASLSQSIRKGAAQWFGVSGDW 132
           SFL   +  A+L+SVS+    +         +RP  +RQ S++Q+IR+G A WFGVS D 
Sbjct: 36  SFLQPLRRQAFLRSVSMPAETAHISSPHHELRRPVLQRQTSITQTIRRGTADWFGVSKDS 95

Query: 133 EGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKP-----CK--MPK 185
           +   Q+WQR+S+ HCS RYG+LK    R+L+LPSQ+  S   TE+P P     C+  M K
Sbjct: 96  DST-QKWQRKSIRHCSQRYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQK 154

Query: 186 IVDPLARGRAFRHPEEM-DRPHAPHPPLTPGVLSLTSFTSVRSGYSHLPRR-KRMSVAHM 243
           I+DPLARGRAFR  ++  +   APH P+TPG  SL SF+S RSG+  LPRR KR SVA M
Sbjct: 155 IIDPLARGRAFRVADDTAEGLSAPHTPVTPGAASLCSFSSSRSGFHRLPRRRKRESVAKM 214

Query: 244 SLQAAAALLKGRSVLDATGQRCRVVKRSFAFPSFLEEDVVDGADTFDSSFFSKE-----E 298
           S +AAAAL+KGRSV D T +R +  +RSF   SFLEED  D  D  D+SFF++E     E
Sbjct: 215 SFRAAAALMKGRSVRDGTFRRAQ--RRSFTPASFLEEDTTDFPDELDTSFFAREGILHEE 272

Query: 299 MSSMPDDVFESPPLSA-SYFRGIPHSA---------SPVSPDGVQIPL-------KEYGR 341
           +S+ PD+VFESP  +A   +   P  A         S +    + +PL       KE   
Sbjct: 273 LSTYPDEVFESPSEAALKDWEKAPEQADLTGGALDRSELERSHLMLPLERGWRKQKEGAA 332

Query: 342 APVP------------GPRRGKRIASKVKHFAFDRKKRHYGLGVVGNWLNRSYRRSISST 389
           AP P            GPRRG+RIA  V+   F R+KR YGLG+VG   NR+YR+ I S 
Sbjct: 333 APQPKVRLRQEVVSTAGPRRGQRIAVPVRKL-FAREKRPYGLGMVGRLTNRTYRKRIDSF 391

Query: 390 VQRQLESFDSHRPYFTYWLTFVHVIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESV 449
           V+RQ+E  D HRP+FTYWLTFVH ++T+L +C YGIAPVGF+QH T   VLRN+GVYE+V
Sbjct: 392 VKRQIEDMDDHRPFFTYWLTFVHSLVTILAVCIYGIAPVGFSQHETVDSVLRNRGVYENV 451

Query: 450 KYIQQENFWVGPSSIDLIHLGAKFSPCIRKDGQIEQLVLRERDLERDSGCCVQNDHSGCI 509
           KY+QQENFW+GPSS  LIHLGAKFSPC+R+D Q+   +   R+ E+ S CCV+ND SGC+
Sbjct: 452 KYVQQENFWIGPSSEALIHLGAKFSPCMRQDPQVHSFIRSAREREKHSACCVRNDRSGCV 511

Query: 510 QTQRKDCSETLATFVKWQDDTGPPMDKSDLGQKRTSGAVCHQDPRTCEEPASSGAHIWPD 569
           QT  ++CS TLA +VKW      P      G KR  G+VCHQDPR C+EP+S   H WP+
Sbjct: 512 QTSEEECSSTLAVWVKWPIHPSAP---ELAGHKRQFGSVCHQDPRVCDEPSSEDPHEWPE 568

Query: 570 DITKWPICTEQARSNHTGFLHMDCEIKGRPCCIGTKGSCEITTREYCEFMHGYFHEEATL 629
           DITKWPICT+ +  NHT   HMDC I GRPCCIGTKG CEIT+REYC+FM GYFHEEATL
Sbjct: 569 DITKWPICTKNSAGNHTNHPHMDCVITGRPCCIGTKGRCEITSREYCDFMRGYFHEEATL 628

Query: 630 CSQVHCLDKVCGLLPFLNPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAG 689
           CSQVHC+D VCGLLPFLNPEVPDQFYRLWLSLFLHAG++HCLVS+ FQMT+LRDLEKLAG
Sbjct: 629 CSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAG 688

Query: 690 WHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAF 749
           WHRIAII++LSG+TGNLASAIFLPYRAEVGPAGSQFG+LACLFVELFQSW +L RPW+AF
Sbjct: 689 WHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAF 748

Query: 750 LNLSAIVLFLFICGLLPWIDNIAHIFGFLSGLLLAFAFLPYITFGTSDKYRKRALILVSL 809
             L A+VLFLF  GLLPWIDN AHI GF+SGL L+FAFLPYI+FG  D YRKR  I++  
Sbjct: 749 FKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIIFQ 808

Query: 810 LAFAGLFAALVLWLYIYPINWPWIEHLTCFPFTSRFCEKYELDQVLH 856
           + F GL A LV+  Y+YP+   W E LTC PFT +FCEKYELD  LH
Sbjct: 809 VVFLGLLAGLVVLFYVYPVRCEWCEFLTCIPFTDKFCEKYELDAQLH 855


>gi|54144654 rhomboid protease 2 [Homo sapiens]
          Length = 303

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 17/167 (10%)

Query: 644 PFL-NPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGI 702
           PF+ +PE  ++ +R    + +HAGV H L ++  Q+ +   LE +    R+ ++++   I
Sbjct: 109 PFIYSPEKREEAWRFISYMLVHAGVQHILGNLCMQLVLGIPLEMVHKGLRVGLVYLAGVI 168

Query: 703 TGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFIC 762
            G+LAS+IF P R  VG +G  + L+   F+ +  ++  +   +  F  L  I++ +   
Sbjct: 169 AGSLASSIFDPLRYLVGASGGVYALMGGYFMNVLVNFQEMIPAFGIFRLLIIILIIVLDM 228

Query: 763 GLLPW-----------IDNIAHIFGFLSGLLLAFAFLPYITFGTSDK 798
           G   +           +   AHI G  +G+ +      Y  F   DK
Sbjct: 229 GFALYRRFFVPEDGSPVSFAAHIAGGFAGMSIG-----YTVFSCFDK 270


>gi|21264326 rhomboid protease 3 [Homo sapiens]
          Length = 404

 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 13/155 (8%)

Query: 647 NPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNL 706
           +P++  Q +R    +F+HAG+ H  ++VV Q+ +   LE + G  RI ++++   + G+L
Sbjct: 204 HPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSL 263

Query: 707 ASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP 766
           A ++       VG +G  + L++     +  +W  ++  +K      A++      G   
Sbjct: 264 AVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAV 323

Query: 767 WI-------------DNIAHIFGFLSGLLLAFAFL 788
           W+               +AH+ G   G+ L    L
Sbjct: 324 WLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVVVL 358


>gi|4506525 rhomboid protease 1 [Homo sapiens]
          Length = 438

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 655 YRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPY 714
           +R    +F+H G+     + + Q+ I   LE + G  RI+++++   + G+L  +I    
Sbjct: 246 WRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITDMR 305

Query: 715 RAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWI------ 768
              VG +G  + L +     +  +W  +  P+K    + A+V      G   W+      
Sbjct: 306 APVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPL 365

Query: 769 -------DNIAHIFGFLSGLLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVL 821
                    +AH+ G + G+ +    L        ++ R +    V LLA+       V 
Sbjct: 366 PASGPQPSFMAHLAGAVVGVSMGLTILR----SYEERLRDQCGWWVVLLAYGTFLLFAVF 421

Query: 822 W 822
           W
Sbjct: 422 W 422


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 56/220 (25%), Positives = 77/220 (35%), Gaps = 23/220 (10%)

Query: 9   GSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKSQPRTWASH 68
           GS SS SSSR  SR PP       PP++ +  P +   + P     RR  +  P      
Sbjct: 357 GSSSSSSSSR--SRSPPK-----KPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPP 409

Query: 69  TTACPPSFLPKRKNPAYLKSVSLQEPRSRWQESSEKRPGFRRQASLSQSIRK-------- 120
            T   P+  P++ N      VS+   R+  + +  K    R   S +   RK        
Sbjct: 410 KTRHSPT--PQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEE 467

Query: 121 ------GAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQG 174
                  AA        +  Q QQ    S    S    R K S  ++ E+  +   S   
Sbjct: 468 DKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSR 527

Query: 175 TESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTP 214
           + SP P K  K   P  R R    P    R  +P P   P
Sbjct: 528 SASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPP 567


>gi|150418009 transforming, acidic coiled-coil containing protein 2
            isoform a [Homo sapiens]
          Length = 2948

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 53/225 (23%), Positives = 78/225 (34%), Gaps = 28/225 (12%)

Query: 4    ADKNGGSVSSVSSSRLQSRKPPNLSI-------TIPPPEKETQAPGEQDSMLPEG----- 51
            A   G S +S +  R +  +PP+L         T  PP KETQ   +++S++P G     
Sbjct: 2112 AYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEESLVPSGENLAS 2171

Query: 52   -FQNRRLKKSQPRTWASHTTACPPSFLPKRKNPAYLKSV-SLQEPRSRWQESSEKRPGFR 109
              +    K   P       T   P+  PK   P   +S   +  P S         P  R
Sbjct: 2172 ETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGGGRVQNSPPVGR 2231

Query: 110  RQASLSQSIRKGAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEA 169
            +   L+ +   G         D  GQ     +         Y   K+S     E P    
Sbjct: 2232 KTLPLTTAPEAGEV----TPSDSGGQEDSPAKGLSVRLEFDYSEDKSSWDNQQENP---- 2283

Query: 170  PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTP 214
                   + K  K P    PL R +  + PE++D   A  PP +P
Sbjct: 2284 -----PPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPA-SPPRSP 2322


>gi|45827755 transforming, acidic coiled-coil containing protein 2
           isoform b [Homo sapiens]
          Length = 1094

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 53/225 (23%), Positives = 78/225 (34%), Gaps = 28/225 (12%)

Query: 4   ADKNGGSVSSVSSSRLQSRKPPNLSI-------TIPPPEKETQAPGEQDSMLPEG----- 51
           A   G S +S +  R +  +PP+L         T  PP KETQ   +++S++P G     
Sbjct: 258 AYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEESLVPSGENLAS 317

Query: 52  -FQNRRLKKSQPRTWASHTTACPPSFLPKRKNPAYLKSV-SLQEPRSRWQESSEKRPGFR 109
             +    K   P       T   P+  PK   P   +S   +  P S         P  R
Sbjct: 318 ETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGGGRVQNSPPVGR 377

Query: 110 RQASLSQSIRKGAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEA 169
           +   L+ +   G         D  GQ     +         Y   K+S     E P    
Sbjct: 378 KTLPLTTAPEAGEV----TPSDSGGQEDSPAKGLSVRLEFDYSEDKSSWDNQQENP---- 429

Query: 170 PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTP 214
                  + K  K P    PL R +  + PE++D   A  PP +P
Sbjct: 430 -----PPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPA-SPPRSP 468


>gi|45827753 transforming, acidic coiled-coil containing protein 2
           isoform c [Homo sapiens]
          Length = 996

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 53/225 (23%), Positives = 78/225 (34%), Gaps = 28/225 (12%)

Query: 4   ADKNGGSVSSVSSSRLQSRKPPNLSI-------TIPPPEKETQAPGEQDSMLPEG----- 51
           A   G S +S +  R +  +PP+L         T  PP KETQ   +++S++P G     
Sbjct: 190 AYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEESLVPSGENLAS 249

Query: 52  -FQNRRLKKSQPRTWASHTTACPPSFLPKRKNPAYLKSV-SLQEPRSRWQESSEKRPGFR 109
             +    K   P       T   P+  PK   P   +S   +  P S         P  R
Sbjct: 250 ETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGGGRVQNSPPVGR 309

Query: 110 RQASLSQSIRKGAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEA 169
           +   L+ +   G         D  GQ     +         Y   K+S     E P    
Sbjct: 310 KTLPLTTAPEAGEV----TPSDSGGQEDSPAKGLSVRLEFDYSEDKSSWDNQQENP---- 361

Query: 170 PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTP 214
                  + K  K P    PL R +  + PE++D   A  PP +P
Sbjct: 362 -----PPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPA-SPPRSP 400


>gi|11119414 transforming, acidic coiled-coil containing protein 2
           isoform d [Homo sapiens]
          Length = 1026

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 53/225 (23%), Positives = 78/225 (34%), Gaps = 28/225 (12%)

Query: 4   ADKNGGSVSSVSSSRLQSRKPPNLSI-------TIPPPEKETQAPGEQDSMLPEG----- 51
           A   G S +S +  R +  +PP+L         T  PP KETQ   +++S++P G     
Sbjct: 190 AYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEESLVPSGENLAS 249

Query: 52  -FQNRRLKKSQPRTWASHTTACPPSFLPKRKNPAYLKSV-SLQEPRSRWQESSEKRPGFR 109
             +    K   P       T   P+  PK   P   +S   +  P S         P  R
Sbjct: 250 ETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGGGRVQNSPPVGR 309

Query: 110 RQASLSQSIRKGAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEA 169
           +   L+ +   G         D  GQ     +         Y   K+S     E P    
Sbjct: 310 KTLPLTTAPEAGEV----TPSDSGGQEDSPAKGLSVRLEFDYSEDKSSWDNQQENP---- 361

Query: 170 PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTP 214
                  + K  K P    PL R +  + PE++D   A  PP +P
Sbjct: 362 -----PPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPA-SPPRSP 400


>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 35.8 bits (81), Expect = 0.17
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 170 PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHP--PLTPGVLSLTSFTSVRS 227
           P F GT  P+P K+P  V        F  P   D    PHP  P TP   SLT  TS+  
Sbjct: 59  PEFPGTPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHPESPETPKADSLT--TSISE 116

Query: 228 GYSHLPRRKRMSVAH 242
               +P+     +AH
Sbjct: 117 SLD-MPKTNLSKMAH 130


>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 35.8 bits (81), Expect = 0.17
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 170 PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHP--PLTPGVLSLTSFTSVRS 227
           P F GT  P+P K+P  V        F  P   D    PHP  P TP   SLT  TS+  
Sbjct: 59  PEFPGTPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHPESPETPKADSLT--TSISE 116

Query: 228 GYSHLPRRKRMSVAH 242
               +P+     +AH
Sbjct: 117 SLD-MPKTNLSKMAH 130


>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 35.8 bits (81), Expect = 0.17
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 170 PSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHP--PLTPGVLSLTSFTSVRS 227
           P F GT  P+P K+P  V        F  P   D    PHP  P TP   SLT  TS+  
Sbjct: 59  PEFPGTPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHPESPETPKADSLT--TSISE 116

Query: 228 GYSHLPRRKRMSVAH 242
               +P+     +AH
Sbjct: 117 SLD-MPKTNLSKMAH 130


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 33.9 bits (76), Expect = 0.66
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 17  SRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKSQPRTWASHTTACPPSF 76
           SR QS  PP+L+       + T A   + S  P     RR     P+ W SHTTA     
Sbjct: 652 SRAQS--PPDLT------SQTTAALTTEASRRPTSEFTRRPTTEAPQRWTSHTTATLTPQ 703

Query: 77  LPKRKNPAYLKSVSLQEPRSRWQESSEK 104
            P+ +    +  ++ Q P+    ES+ K
Sbjct: 704 APRERTTKTMAMLTTQGPQEMTSESTIK 731


>gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens]
          Length = 329

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 166 SQEAPSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPHPPLTPG 215
           SQE P+    E   P  MP          AFR P   DRP AP P  +PG
Sbjct: 106 SQERPA----EESAPALMPSSAPRGPTEPAFRRPSSADRPLAPGPSSSPG 151


>gi|31317292 Smad ubiquitination regulatory factor 1 isoform 1 [Homo
           sapiens]
          Length = 757

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 55/227 (24%), Positives = 82/227 (36%), Gaps = 37/227 (16%)

Query: 4   ADKNGGSVSSVSS----SRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKK 59
           A   GG+   V S     RLQ+++  N  +       + +  G Q   LPEG++ R   +
Sbjct: 188 AAAGGGNCRFVESPSQDQRLQAQRLRNPDVRGSLQTPQNRPHGHQSPELPEGYEQRTTVQ 247

Query: 60  SQ---------PRTWASHTTACPPSFLPKRKNPAYLKSVSLQ----EPRS----RWQESS 102
            Q           TW       P   +P   + A+L    LQ    EPR        E  
Sbjct: 248 GQVYFLHTQTGVSTWHDPRIPSPSGTIP-GGDAAFLYEFLLQGHTSEPRDLNSVNCDELG 306

Query: 103 EKRPGFRRQASLSQSIRKGAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDL 162
              PG+  ++++S  I            D   +  Q+    LHH      +LK   Q  L
Sbjct: 307 PLPPGWEVRSTVSGRI---------YFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQ-PL 356

Query: 163 ELPSQEAPSFQGTESPKPCKMPKIVDPLARGRAFRHPEEMDRPHAPH 209
            LPS+   S +  E P       +V  L   +  RH   + +P A H
Sbjct: 357 PLPSE--GSLEDEELPAQRYERDLVQKL---KVLRHELSLQQPQAGH 398


>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 166 SQEAPSFQGTESPKPCKMPK-IVDPLARGRAFRHPEEMDRPHAPHPPLTPG 215
           S E P+ + T +P P   P+   +P     A R P   DRP AP P  +PG
Sbjct: 74  SNERPAEEPTPAPMPSSAPRGPTEP-----ALRRPSSADRPLAPGPSSSPG 119


>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
          Length = 364

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 166 SQEAPSFQGTESPKPCKMPK-IVDPLARGRAFRHPEEMDRPHAPHPPLTPG 215
           S E P+ + T +P P   P+   +P     A R P   DRP AP P  +PG
Sbjct: 177 SNERPAEEPTPAPMPSSAPRGPTEP-----ALRRPSSADRPLAPGPSSSPG 222


>gi|65301141 PH domain and leucine rich repeat protein
           phosphatase-like [Homo sapiens]
          Length = 1323

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query: 109 RRQASLSQSIRKGAAQWFGVSGDWEGQRQQWQRRSLHHCSMRYGRLKASCQRDLELP 165
           RRQ SL+ S     AQ + VS +   + Q+WQR++    S R   +  SC    E+P
Sbjct: 209 RRQYSLAFSSAGAQAQTYHVSFETLAEYQRWQRQASKVVSQRISTVDLSCYSLEEVP 265


>gi|121949815 placenta-specific 4 [Homo sapiens]
          Length = 150

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 196 FRHPEEMDRPHAPHPPLTPGVLSLTSFTSVRSGYSH 231
           F HP+ +  P  PH P  P +L+L + T    GY H
Sbjct: 65  FTHPDTLTHPGHPHSPWIPSLLTLDTLT--HPGYPH 98


>gi|38372909 jumonji domain containing 1B [Homo sapiens]
          Length = 1761

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3   SADKNGGSVSSVSSSRLQSRKPPNLSITIPPPEKETQAPGEQDSMLPEGFQN 54
           SA  NG S SS +SS  Q  + P LS + P  E+ T  PG+QD+ L + F N
Sbjct: 718 SAMGNGRS-SSPTSSLTQPIEMPTLSSS-PTEERPTVGPGQQDNPLLKTFSN 767


>gi|148833508 notch1 preproprotein [Homo sapiens]
          Length = 2555

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 17/87 (19%)

Query: 545 SGAVCHQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHM----DCEIKGRPC 600
           +G +CH +      P + G++   + +    ICT    S +TG        +C +   PC
Sbjct: 366 TGLLCHLNDACISNPCNEGSNCDTNPVNGKAICT--CPSGYTGPACSQDVDECSLGANPC 423

Query: 601 -----CIGTKGSCEITTREYCEFMHGY 622
                CI T GS E      C+ + GY
Sbjct: 424 EHAGKCINTLGSFE------CQCLQGY 444


>gi|168693643 decay accelerating factor for complement isoform 2
           precursor [Homo sapiens]
          Length = 440

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 24  PPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKSQPRTWASHTTACPPSF-LPKRKN 82
           P +  IT    E   + PGE+DS++        LK SQ   W+     C  S  +P R N
Sbjct: 56  PEDTVITYKCEESFVKIPGEKDSVIC-------LKGSQ---WSDIEEFCNRSCEVPTRLN 105

Query: 83  PAYLKSVSLQE---PRSRWQESSEKRPGFRRQASLSQSI 118
            A LK   + +   P     E  E RPG+RR+ SLS  +
Sbjct: 106 SASLKQPYITQNYFPVGTVVEY-ECRPGYRREPSLSPKL 143


>gi|10835143 decay accelerating factor for complement isoform 1
           preproprotein [Homo sapiens]
          Length = 381

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 24  PPNLSITIPPPEKETQAPGEQDSMLPEGFQNRRLKKSQPRTWASHTTACPPSF-LPKRKN 82
           P +  IT    E   + PGE+DS++        LK SQ   W+     C  S  +P R N
Sbjct: 56  PEDTVITYKCEESFVKIPGEKDSVIC-------LKGSQ---WSDIEEFCNRSCEVPTRLN 105

Query: 83  PAYLKSVSLQE---PRSRWQESSEKRPGFRRQASLSQSI 118
            A LK   + +   P     E  E RPG+RR+ SLS  +
Sbjct: 106 SASLKQPYITQNYFPVGTVVEY-ECRPGYRREPSLSPKL 143


>gi|28557777 immunoglobulin-like domain containing receptor 1 [Homo
           sapiens]
          Length = 502

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 11  VSSVSSSRLQSRKPPNLSITI-----PPPEKETQAPGEQ------DSMLPEG---FQNRR 56
           V S S +R +   PP  S        P P + TQ  G +         LP G   + +  
Sbjct: 380 VPSSSEARWRPSHPPFRSRCQERPRRPSPRESTQRHGRRRRHRSYSPPLPSGLSSWSSEE 439

Query: 57  LKKSQPRTWASHTTACPPSFLPKRKNPAYLKSVSLQEPRSRWQESSEKR 105
            K+ QP++W +H         P+ K P+Y          SR + S E+R
Sbjct: 440 DKERQPQSWRAHRRGSHSPHWPEEKPPSYRSLDITPGKNSRKKGSVERR 488


>gi|223671872 inhibitor of kappa light polypeptide gene enhancer in
           B-cells, kinase gamma isoform c [Homo sapiens]
          Length = 320

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 135 QRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKPCKMPKIVDPLARGR 194
           ++++  +  L      Y +LKASCQ    +        + +++P P     +  PLA   
Sbjct: 225 EKKELLQEQLEQLQREYSKLKASCQESARIEDMRKRHVEVSQAPLPPAPAYLSSPLALPS 284

Query: 195 AFRHPEE 201
             R P E
Sbjct: 285 QRRSPPE 291


>gi|223671870 inhibitor of kappa light polypeptide gene enhancer in
           B-cells, kinase gamma isoform b [Homo sapiens]
          Length = 487

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 135 QRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKPCKMPKIVDPLARGR 194
           ++++  +  L      Y +LKASCQ    +        + +++P P     +  PLA   
Sbjct: 392 EKKELLQEQLEQLQREYSKLKASCQESARIEDMRKRHVEVSQAPLPPAPAYLSSPLALPS 451

Query: 195 AFRHPEE 201
             R P E
Sbjct: 452 QRRSPPE 458


>gi|4504631 inhibitor of kappa light polypeptide gene enhancer in
           B-cells, kinase gamma isoform a [Homo sapiens]
          Length = 419

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 135 QRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKPCKMPKIVDPLARGR 194
           ++++  +  L      Y +LKASCQ    +        + +++P P     +  PLA   
Sbjct: 324 EKKELLQEQLEQLQREYSKLKASCQESARIEDMRKRHVEVSQAPLPPAPAYLSSPLALPS 383

Query: 195 AFRHPEE 201
             R P E
Sbjct: 384 QRRSPPE 390


>gi|153792133 inhibitor of kappa light polypeptide gene enhancer in
           B-cells, kinase gamma isoform a [Homo sapiens]
          Length = 419

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 135 QRQQWQRRSLHHCSMRYGRLKASCQRDLELPSQEAPSFQGTESPKPCKMPKIVDPLARGR 194
           ++++  +  L      Y +LKASCQ    +        + +++P P     +  PLA   
Sbjct: 324 EKKELLQEQLEQLQREYSKLKASCQESARIEDMRKRHVEVSQAPLPPAPAYLSSPLALPS 383

Query: 195 AFRHPEE 201
             R P E
Sbjct: 384 QRRSPPE 390


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,885,248
Number of Sequences: 37866
Number of extensions: 1868945
Number of successful extensions: 5748
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 5686
Number of HSP's gapped (non-prelim): 80
length of query: 856
length of database: 18,247,518
effective HSP length: 111
effective length of query: 745
effective length of database: 14,044,392
effective search space: 10463072040
effective search space used: 10463072040
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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