Guide to the Human Genome
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Name: IKBKG Sequence: fasta or formatted (320aa) NCBI GI: 223671872
Description:

inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma isoform c

Referenced in:

NF-kappaB Pathway

Other entries for this name:
alt prot [419aa] inhibitor of kappa light polypeptide gene enhancer in B-cells, ki...
alt prot [487aa] inhibitor of kappa light polypeptide gene enhancer in B-cells, ki...
alt prot [419aa] inhibitor of kappa light polypeptide gene enhancer in B-cells, ki...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         28           2
 C cysteine            3.4         11           2
 D aspartate           3.8         12           1
 E glutamate          13.1         42           2
 F phenylalanine       1.9          6           1
 G glycine             2.8          9           2
 H histidine           2.5          8           1
 I isoleucine          2.2          7           1
 K lysine              7.2         23           2
 L leucine            12.2         39           2
 M methionine          2.5          8           1
 N asparagine          1.2          4           1
 P proline             5.6         18           2
 Q glutamine          11.2         36           3
 R arginine            7.8         25           2
 S serine              6.6         21           2
 T threonine           1.2          4           1
 V valine              3.8         12           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inhibitor of kappa light polypeptide gene enhancer ... 
IKBKG                 0.925   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.925   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.925   inhibitor of kappa light polypeptide gene enhancer ...
OPTN                  0.078   optineurin 
OPTN                  0.078   optineurin 
OPTN                  0.078   optineurin 
OPTN                  0.078   optineurin 
CEP164                0.060   centrosomal protein 164kDa 
LOC100133220          0.054   PREDICTED: hypothetical protein 
CGN                   0.054   cingulin 
CEP250                0.052   centrosomal protein 2 
LOC100133758          0.052   PREDICTED: hypothetical protein, partial 
DEF6                  0.052   differentially expressed in FDCP 6 homolog 
CROCC                 0.051   ciliary rootlet coiled-coil 
FBF1                  0.049   Fas (TNFRSF6) binding factor 1 
DSP                   0.049   desmoplakin isoform I 
PLEC1                 0.049   plectin 1 isoform 11 
PLEC1                 0.049   plectin 1 isoform 10 
PLEC1                 0.049   plectin 1 isoform 8 
PLEC1                 0.049   plectin 1 isoform 7 
PLEC1                 0.049   plectin 1 isoform 6 
PLEC1                 0.049   plectin 1 isoform 3 
PLEC1                 0.049   plectin 1 isoform 2 
PLEC1                 0.049   plectin 1 isoform 1 
LOC645202             0.047   PREDICTED: hypothetical protein LOC645202 
EPS15                 0.047   epidermal growth factor receptor pathway substrate 15...
GOLGA6D               0.047   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.047   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
C14orf145             0.047   hypothetical protein LOC145508 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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