Guide to the Human Genome
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Name: KIAA1712 Sequence: fasta or formatted (390aa) NCBI GI: 93102389
Description:

HBV PreS1-transactivated protein 3 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {399aa} HBV PreS1-transactivated protein 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         19           2
 C cysteine            2.3          9           1
 D aspartate           5.6         22           1
 E glutamate          10.0         39           2
 F phenylalanine       2.3          9           1
 G glycine             3.1         12           1
 H histidine           1.0          4           1
 I isoleucine          6.7         26           2
 K lysine              9.0         35           3
 L leucine            10.3         40           2
 M methionine          3.3         13           1
 N asparagine          5.6         22           1
 P proline             4.4         17           2
 Q glutamine           3.6         14           2
 R arginine            3.6         14           1
 S serine              9.0         35           2
 T threonine           5.4         21           2
 V valine              6.7         26           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HBV PreS1-transactivated protein 3 isoform a 
KIAA1712              0.923   HBV PreS1-transactivated protein 3 isoform b 
RSBN1L                0.016   round spermatid basic protein 1-like 
MACF1                 0.013   microfilament and actin filament cross-linker protei...
MACF1                 0.013   microfilament and actin filament cross-linker protei...
SPTA1                 0.013   spectrin, alpha, erythrocytic 1 
CENPF                 0.013   centromere protein F 
TRAF3IP1              0.013   TNF receptor-associated factor 3 interacting protei...
TRAF3IP1              0.013   TNF receptor-associated factor 3 interacting protein...
CLUAP1                0.013   clusterin associated protein 1 isoform 1 
ERBB2IP               0.011   ERBB2 interacting protein isoform 7 
ERBB2IP               0.011   ERBB2 interacting protein isoform 2 
CNTLN                 0.011   centlein isoform 1 
HOOK1                 0.011   hook homolog 1 
SASS6                 0.009   spindle assembly abnormal protein 6 
NCAPG                 0.009   chromosome condensation protein G 
SYNE1                 0.009   spectrin repeat containing, nuclear envelope 1 isof...
SYNE1                 0.009   spectrin repeat containing, nuclear envelope 1 isof...
SYNE1                 0.009   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.009   spectrin repeat containing, nuclear envelope 1 isof...
COBL                  0.009   cordon-bleu homolog 
IPO4                  0.009   importin 4 
CHMP4A                0.009   chromatin modifying protein 4A 
MYH3                  0.009   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH13                 0.009   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CTAGE5                0.009   CTAGE family, member 5 isoform 3 
CTAGE5                0.009   CTAGE family, member 5 isoform 1 
CTAGE5                0.009   CTAGE family, member 5 isoform 4 
CTAGE5                0.009   CTAGE family, member 5 isoform 2 
CCAR1                 0.008   cell-cycle and apoptosis regulatory protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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