Guide to the Human Genome
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Name: CLUAP1 Sequence: fasta or formatted (413aa) NCBI GI: 52345626
Description:

clusterin associated protein 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {247aa} clusterin associated protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         21           2
 C cysteine            0.5          2           1
 D aspartate           9.2         38           4
 E glutamate          13.6         56           3
 F phenylalanine       3.1         13           2
 G glycine             3.4         14           2
 H histidine           1.0          4           2
 I isoleucine          5.1         21           1
 K lysine              8.5         35           2
 L leucine            10.4         43           2
 M methionine          4.1         17           2
 N asparagine          4.4         18           2
 P proline             3.1         13           2
 Q glutamine           4.6         19           2
 R arginine            6.5         27           2
 S serine              5.8         24           1
 T threonine           5.1         21           1
 V valine              3.9         16           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   clusterin associated protein 1 isoform 1 
CLUAP1                0.589   clusterin associated protein 1 isoform 2 
UBTF                  0.046   upstream binding transcription factor, RNA polymera...
UBTF                  0.046   upstream binding transcription factor, RNA polymera...
UBTF                  0.046   upstream binding transcription factor, RNA polymerase...
NCL                   0.036   nucleolin 
ATRX                  0.036   transcriptional regulator ATRX isoform 2 
ATRX                  0.036   transcriptional regulator ATRX isoform 1 
MYO18A                0.034   myosin 18A isoform b 
ANKRD18B              0.032   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.032   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.032   PREDICTED: ankyrin repeat domain 18B 
MYH3                  0.031   myosin, heavy chain 3, skeletal muscle, embryonic [H...
C10orf118             0.031   CTCL tumor antigen L14-2 
GOLGB1                0.031   golgi autoantigen, golgin subfamily b, macrogolgin ...
GAS8                  0.031   growth arrest-specific 8 
MYH9                  0.031   myosin, heavy polypeptide 9, non-muscle 
CEP290                0.029   centrosomal protein 290kDa 
MYO18A                0.029   myosin 18A isoform a 
CCDC27                0.029   coiled-coil domain containing 27 
GOLGA4                0.029   golgi autoantigen, golgin subfamily a, 4 
ANKRD18A              0.028   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.028   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.028   PREDICTED: ankyrin repeat domain 18A 
LUZP1                 0.028   leucine zipper protein 1 
LUZP1                 0.028   leucine zipper protein 1 
CENPF                 0.028   centromere protein F 
UPF3B                 0.028   UPF3 regulator of nonsense transcripts homolog B iso...
ESF1                  0.028   ABT1-associated protein 
RAB11FIP3             0.027   rab11-family interacting protein 3 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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