BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|14149728 BarH-like homeobox 1 [Homo sapiens] (327 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|14149728 BarH-like homeobox 1 [Homo sapiens] 660 0.0 gi|39930383 BarH-like homeobox 2 [Homo sapiens] 313 1e-85 gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 95 7e-20 gi|27886557 msh homeobox 2 [Homo sapiens] 92 5e-19 gi|6633798 BarH-like homeobox 2 [Homo sapiens] 92 5e-19 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 92 8e-19 gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 89 7e-18 gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 89 7e-18 gi|19923352 NK3 homeobox 1 [Homo sapiens] 87 2e-17 gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 87 2e-17 gi|4885185 distal-less homeobox 3 [Homo sapiens] 86 4e-17 gi|11056038 visual system homeobox 1 isoform a [Homo sapiens] 86 4e-17 gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 86 6e-17 gi|226437602 NK1 homeobox 2 [Homo sapiens] 85 8e-17 gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 85 8e-17 gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 85 8e-17 gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 85 8e-17 gi|153218470 BarH-like homeobox 1 [Homo sapiens] 85 1e-16 gi|157743259 H6 family homeobox 3 [Homo sapiens] 84 1e-16 gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 84 1e-16 gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 83 4e-16 gi|70608170 H6 family homeobox 2 [Homo sapiens] 82 6e-16 gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] 82 6e-16 gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] 81 1e-15 gi|63054872 ladybird homeobox 1 [Homo sapiens] 81 1e-15 gi|84105335 mesenchyme homeobox 2 [Homo sapiens] 80 2e-15 gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 80 2e-15 gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 80 2e-15 gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 80 2e-15 gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 80 2e-15 >gi|14149728 BarH-like homeobox 1 [Homo sapiens] Length = 327 Score = 660 bits (1702), Expect = 0.0 Identities = 327/327 (100%), Positives = 327/327 (100%) Query: 1 MEGSNGFGIDSILSHRAGSPALPKGDPLLGDCRSPLELSPRSESSSDCSSPASPGRDCLE 60 MEGSNGFGIDSILSHRAGSPALPKGDPLLGDCRSPLELSPRSESSSDCSSPASPGRDCLE Sbjct: 1 MEGSNGFGIDSILSHRAGSPALPKGDPLLGDCRSPLELSPRSESSSDCSSPASPGRDCLE 60 Query: 61 TGTPRPGGASGPGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQP 120 TGTPRPGGASGPGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQP Sbjct: 61 TGTPRPGGASGPGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQP 120 Query: 121 AAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRK 180 AAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRK Sbjct: 121 AAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRK 180 Query: 181 ARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVG 240 ARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVG Sbjct: 181 ARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVG 240 Query: 241 LELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPALQRPLVPRILI 300 LELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPALQRPLVPRILI Sbjct: 241 LELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPALQRPLVPRILI 300 Query: 301 HGLQGASEPPPPLPPLAGVLPRAAQPR 327 HGLQGASEPPPPLPPLAGVLPRAAQPR Sbjct: 301 HGLQGASEPPPPLPPLAGVLPRAAQPR 327 >gi|39930383 BarH-like homeobox 2 [Homo sapiens] Length = 387 Score = 313 bits (803), Expect = 1e-85 Identities = 203/389 (52%), Positives = 237/389 (60%), Gaps = 66/389 (16%) Query: 1 MEGSNG--FGIDSILSHRA-GSPALPKGD--PL----LGDCRSPLELSPRSESSSDCSSP 51 MEG++G FGID+ILS + GSP + GD PL D RS SP SE + ++P Sbjct: 3 MEGASGSSFGIDTILSSASSGSPGMMNGDFRPLGEARTADFRSQATPSPCSEIDTVGTAP 62 Query: 52 ASPGRDCLETGTPR--------------------PGGASGPGLDSHLQ------------ 79 +SP +E P P A L Q Sbjct: 63 SSPISVTMEPPEPHLVADATQHHHHLHHSQQPPPPAAAPTQSLQPLPQQQQPLPPQQPPP 122 Query: 80 --PGQL-SAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQPAAPEPGGRLAAKAA-- 134 P QL SA + RT TSSFLI+DIL D KPLAACAPYS+S ++P + + A Sbjct: 123 PPPQQLGSAASAPRTSTSSFLIKDILGDSKPLAACAPYSTS--VSSPHHTPKQESNAVHE 180 Query: 135 --------EDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRKARTAFT 186 ED + KLDK + S + KEEGDREI+SSR+SPPVR KKPRKARTAF+ Sbjct: 181 SFRPKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRKARTAFS 240 Query: 187 DHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAE 246 DHQL QLERSFERQKYLSVQDRM+LAA+LNLTDTQVKTWYQNRRTKWKRQTAVGLELLAE Sbjct: 241 DHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAE 300 Query: 247 AGNYSALQRMFPSPYFYPQSLVSNLD------PGAALY--LYRGPSAPPPALQRPLVPRI 298 AGNYSALQRMFPSPYFY SL+ ++D AA+Y +YR P AP P LQRPLVPR+ Sbjct: 301 AGNYSALQRMFPSPYFYHPSLLGSMDSTTAAAAAAAMYSSMYRTPPAPHPQLQRPLVPRV 360 Query: 299 LIHGLQGASEPPPPLPPLAGVLPRAAQPR 327 LIHGL + P L PL+ +P PR Sbjct: 361 LIHGLGPGGQ--PALNPLSSPIPGTPHPR 387 >gi|116805350 homeo box (H6 family) 1 [Homo sapiens] Length = 348 Score = 95.1 bits (235), Expect = 7e-20 Identities = 77/209 (36%), Positives = 101/209 (48%), Gaps = 30/209 (14%) Query: 120 PAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPR 179 P P PG + +AAE L G A ++ ++ E +R V + + Sbjct: 152 PRGPGPGA-VQREAAE-----LAARGPAAGTEEASELAEV-PAAAGETRGGVGVGGGRKK 204 Query: 180 KARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAV 239 K RT F+ Q+ QLE +F+ ++YLS +R LAASL LT+TQVK W+QNRR KWKRQ A Sbjct: 205 KTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAA 264 Query: 240 GLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPALQRPLVPRIL 299 LE A + + QR+ P Y +S P AA + PP L PL P Sbjct: 265 ELE--AASLSPPGAQRLVRVPVLYHES-----PPAAA------AAGPPATLPFPLAP--- 308 Query: 300 IHGLQGASEPPPPLPPLAGVL--PRAAQP 326 A PPPPL +G L P AA P Sbjct: 309 -----AAPAPPPPLLGFSGALAYPLAAFP 332 >gi|27886557 msh homeobox 2 [Homo sapiens] Length = 267 Score = 92.4 bits (228), Expect = 5e-19 Identities = 89/263 (33%), Positives = 117/263 (44%), Gaps = 38/263 (14%) Query: 53 SPGRDCLETGTPRPGGASGPGLDSHLQPGQLSAPAQSRTVTSS---FLIRDILADCKPLA 109 S G D P +GPG PG A+ R V S F + +++D KP Sbjct: 5 SKGNDLFSPDEEGPAVVAGPGPG----PGGAEGAAEERRVKVSSLPFSVEALMSDKKPPK 60 Query: 110 ACAPY----SSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREIS 165 +P +S+G P A+ A L K AS SE E+G + Sbjct: 61 EASPLPAESASAGATLRPLLLSGHGAREAHS-PGPLVKPFETASVKSENS--EDGAAWMQ 117 Query: 166 S-SRDSPPVRLKKP-----------RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAA 213 R SPP R P RK RT FT QL LER F +++YLS+ +R E ++ Sbjct: 118 EPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSS 177 Query: 214 SLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDP 273 SLNLT+TQVK W+QNRR K KR LE L A + M PS + P + S L Sbjct: 178 SLNLTETQVKIWFQNRRAKAKRLQEAELEKLK-----MAAKPMLPSSFSLPFPISSPLQ- 231 Query: 274 GAALYLYRGPSAPPPALQRPLVP 296 A++Y G S P RP++P Sbjct: 232 AASIY---GASYP---FHRPVLP 248 >gi|6633798 BarH-like homeobox 2 [Homo sapiens] Length = 279 Score = 92.4 bits (228), Expect = 5e-19 Identities = 43/75 (57%), Positives = 53/75 (70%) Query: 166 SSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTW 225 S + P R KKPR++RT FT+ QL LE+ F++QKYLS DR++LA SL LT QVKTW Sbjct: 121 SETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW 180 Query: 226 YQNRRTKWKRQTAVG 240 YQNRR KWK+ G Sbjct: 181 YQNRRMKWKKMVLKG 195 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 91.7 bits (226), Expect = 8e-19 Identities = 74/217 (34%), Positives = 91/217 (41%), Gaps = 35/217 (16%) Query: 110 ACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRD 169 A AP P AP P G AA + K + R S S+ Sbjct: 610 AAAPGPRENSPVAPGPPGGAAAPGG----------AGTTPQGTATAAKPKRKRTGSDSKS 659 Query: 170 SPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229 KPR+ARTAFT QL LE F+ +YLSV +R+ LA SL+LT+TQVK W+QNR Sbjct: 660 G------KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNR 713 Query: 230 RTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPA 289 RTKWK+Q G + A G P P PG L P +P P Sbjct: 714 RTKWKKQNP-GADTSAPTGGGGG-----PGP---------GAGPGTGLPGGLSPLSPSPP 758 Query: 290 LQRPLVPRILIHGLQGASEPPPPLPPLAGVLPRAAQP 326 + PL +HG G P A LP + P Sbjct: 759 MGAPLG----MHGPAGYPAHGPGGLVCAAQLPFLSSP 791 >gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 653 Score = 88.6 bits (218), Expect = 7e-18 Identities = 72/214 (33%), Positives = 89/214 (41%), Gaps = 35/214 (16%) Query: 113 PYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPP 172 P P AP P G AA + K + R S S+ Sbjct: 48 PGPRENSPVAPGPPGGAAAPGG----------AGTTPQGTATAAKPKRKRTGSDSKSG-- 95 Query: 173 VRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTK 232 KPR+ARTAFT QL LE F+ +YLSV +R+ LA SL+LT+TQVK W+QNRRTK Sbjct: 96 ----KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 151 Query: 233 WKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPALQR 292 WK+Q G + A G P P PG L P +P P + Sbjct: 152 WKKQNP-GADTSAPTGGGGG-----PGP---------GAGPGTGLPGGLSPLSPSPPMGA 196 Query: 293 PLVPRILIHGLQGASEPPPPLPPLAGVLPRAAQP 326 PL +HG G P A LP + P Sbjct: 197 PLG----MHGPAGYPAHGPGGLVCAAQLPFLSSP 226 >gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] Length = 411 Score = 88.6 bits (218), Expect = 7e-18 Identities = 73/217 (33%), Positives = 90/217 (41%), Gaps = 35/217 (16%) Query: 110 ACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRD 169 A AP P A P G AA + K + R S S+ Sbjct: 207 AAAPGPRENSPVAQGPPGGAAAPGG----------AGTTPQGTATAAKPKRKRTGSDSKS 256 Query: 170 SPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229 KPR+ARTAFT QL LE F+ +YLSV +R+ LA SL+LT+TQVK W+QNR Sbjct: 257 G------KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNR 310 Query: 230 RTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPA 289 RTKWK+Q G + A G P P PG L P +P P Sbjct: 311 RTKWKKQNP-GADTSAPTGGGGG-----PGP---------GAGPGTGLPGGLSPLSPSPP 355 Query: 290 LQRPLVPRILIHGLQGASEPPPPLPPLAGVLPRAAQP 326 + PL +HG G P A LP + P Sbjct: 356 MGAPLG----MHGPAGYPAHGPGGLVCAAQLPFLSSP 388 >gi|19923352 NK3 homeobox 1 [Homo sapiens] Length = 234 Score = 87.4 bits (215), Expect = 2e-17 Identities = 71/194 (36%), Positives = 93/194 (47%), Gaps = 29/194 (14%) Query: 59 LETGTPRPGGASGPGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSG 118 L PRPG A G + P S+ +TS FLI+DIL D S Sbjct: 2 LRVPEPRPGEAKAEGA---------APPTPSKPLTS-FLIQDILRDGAQRQGGRTSSQRQ 51 Query: 119 QPAAPEP-----GGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSR-DSP- 171 + PEP GGR A A D +L A ++E + E +R + S DS Sbjct: 52 RDPEPEPEPEPEGGRSRAGAQND---QLSTGPRAAPEEAETLAETEPERHLGSYLLDSEN 108 Query: 172 --------PVRLKKPRK-ARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQV 222 P K+P+K +R AF+ Q+ +LER F QKYLS +R LA +L LT+TQV Sbjct: 109 TSGALPRLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQV 168 Query: 223 KTWYQNRRTKWKRQ 236 K W+QNRR K KR+ Sbjct: 169 KIWFQNRRYKTKRK 182 >gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] Length = 334 Score = 87.4 bits (215), Expect = 2e-17 Identities = 75/213 (35%), Positives = 104/213 (48%), Gaps = 27/213 (12%) Query: 120 PAA--PEPGGRLAAK-AAEDFRDKLDKSGSNASSDSEY------KVKEEGDREISSSRDS 170 PAA EP G +A AAED +KS SN+++D +Y + + REI + Sbjct: 40 PAAFLKEPQGAFSASGAAED----CNKSKSNSAADPDYCRRILVRDAKGSIREIILPKG- 94 Query: 171 PPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRR 230 + L +P++ RT+FT QL +LE F+R +Y+ ++R ELA LNL++TQVK W+QNRR Sbjct: 95 --LDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRR 152 Query: 231 TKWKRQTAVGLELLA----EAGNYSALQRMFPSPYFYPQSLVSNLDP---GAALYLYRGP 283 TK K+ EL + A S L+ + P L + L P GA RGP Sbjct: 153 TKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGP 212 Query: 284 SAPP----PALQRPLVPRILIHGLQGASEPPPP 312 S P A G GA+ P PP Sbjct: 213 SLPALGAGAAAGSAAAAAAAAPGPAGAASPHPP 245 >gi|4885185 distal-less homeobox 3 [Homo sapiens] Length = 287 Score = 85.9 bits (211), Expect = 4e-17 Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 33/159 (20%) Query: 156 VKEEGDREISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASL 215 VKEE + E+ P KK RK RT ++ +QLA L+R F++ +YL++ +R ELAA L Sbjct: 111 VKEEPEAEVRMVNGKP----KKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQL 166 Query: 216 NLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGA 275 LT TQVK W+QNRR+K+K+ G L + N S S+ N P Sbjct: 167 GLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNS-------------DSMACNSPPSP 213 Query: 276 ALYLYRGPSAPPPALQRPLVPRILIHGLQGASEPPPPLP 314 AL+ S P PA S+ PPPLP Sbjct: 214 ALWDTSSHSTPAPA----------------RSQLPPPLP 236 Score = 33.5 bits (75), Expect = 0.26 Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 35 PLELSPRSESSSDCSSPASPGR-DCLETGTPRPGGAS-GPGLDSHLQPGQLSAPAQSRTV 92 PLE SP + S C+SP SP D TP P + P L P L P S Sbjct: 194 PLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPARSQLPPPLPYSASPSYLDDPTNS-WY 252 Query: 93 TSSFLIRDILADCKPLAACAPYSSSGQPAAPEPG 126 + L L P A ++S G P P PG Sbjct: 253 HAQNLSGPHLQQQPPQPATLHHASPGPP--PNPG 284 >gi|11056038 visual system homeobox 1 isoform a [Homo sapiens] Length = 365 Score = 85.9 bits (211), Expect = 4e-17 Identities = 75/253 (29%), Positives = 111/253 (43%), Gaps = 17/253 (6%) Query: 8 GIDSILSHRAGSPALPKGDPLLGDCRSPLELSPRSESSSDCSSPASPGRDCLETGTPRPG 67 G DS+ R S AL G G ++ ++ +PA PG+ G P Sbjct: 3 GRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELPAPAGPGQGSGCEG-PAVA 61 Query: 68 GASGPGLD-SHLQPGQLSAPAQSRTVTSSFLIRDILADCKP--LAACAPYSSSGQPAAPE 124 GPGLD S L G L + F + A P L A P+ P PE Sbjct: 62 PCPGPGLDGSSLARGALPL---GLGLLCGFGTQPPAAARAPCLLLADVPFLP---PRGPE 115 Query: 125 PGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRKARTA 184 P LA + +S S ++SD + + ++ D + S P + +K R+ RT Sbjct: 116 PAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKAS-----PTLGKRKKRRHRTV 170 Query: 185 FTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTA--VGLE 242 FT HQL +LE++F Y V R LA L + +++ W+QNRR KW+++ G Sbjct: 171 FTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSS 230 Query: 243 LLAEAGNYSALQR 255 ++AE G Y A+ R Sbjct: 231 VMAEYGLYGAMVR 243 >gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] Length = 284 Score = 85.5 bits (210), Expect = 6e-17 Identities = 71/209 (33%), Positives = 93/209 (44%), Gaps = 28/209 (13%) Query: 51 PASPGRDCLETGTPRPGGASG------------------PGLDSHLQPGQLSAPAQSRTV 92 P S G D + +G PGG G G + G L+ S V Sbjct: 16 PISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGV 75 Query: 93 TSSFLIRDILADCKPLAACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDS 152 +IR + +PL P + G PA P P G A SG + D Sbjct: 76 GPGGVIR--VPAHRPLPVPPP--AGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDR 131 Query: 153 EYKVKE--EGDREISSS-RDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRM 209 G R I ++ P + KKPR T+F+ Q+ +LER F RQKYL+ +R Sbjct: 132 LTAALSPFSGTRRIGHPYQNRTPPKRKKPR---TSFSRSQVLELERRFLRQKYLASAERA 188 Query: 210 ELAASLNLTDTQVKTWYQNRRTKWKRQTA 238 LA +L +TD QVKTW+QNRRTKW+RQTA Sbjct: 189 ALAKALRMTDAQVKTWFQNRRTKWRRQTA 217 >gi|226437602 NK1 homeobox 2 [Homo sapiens] Length = 310 Score = 85.1 bits (209), Expect = 8e-17 Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 39/147 (26%) Query: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236 KPR+ARTAFT QL LE F +YLSV +R+ LA SL+LT+TQVK W+QNRRTKWK+Q Sbjct: 162 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 221 Query: 237 TAVGLELLAEAG-----------------------------------NYSALQRMFPSPY 261 G + A+ G +YSA +FPS Sbjct: 222 NP-GADGAAQVGGGAPQPGAAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 280 Query: 262 FYPQSLVSNLDPGAALYLYRGPSAPPP 288 +P + + PG+ + GPS P Sbjct: 281 SFPLTAAA---PGSPFAPFLGPSYLTP 304 >gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 85.1 bits (209), Expect = 8e-17 Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 39/147 (26%) Query: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236 KPR+ARTAFT QL LE F +YLSV +R+ LA SL+LT+TQVK W+QNRRTKWK+Q Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243 Query: 237 TAVGLELLAEAG-----------------------------------NYSALQRMFPSPY 261 G + A+ G +YSA +FPS Sbjct: 244 NP-GADGAAQVGGGAPQPGAAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 302 Query: 262 FYPQSLVSNLDPGAALYLYRGPSAPPP 288 +P + + PG+ + GPS P Sbjct: 303 SFPLTAAA---PGSPFAPFLGPSYLTP 326 >gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 85.1 bits (209), Expect = 8e-17 Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 39/147 (26%) Query: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236 KPR+ARTAFT QL LE F +YLSV +R+ LA SL+LT+TQVK W+QNRRTKWK+Q Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243 Query: 237 TAVGLELLAEAG-----------------------------------NYSALQRMFPSPY 261 G + A+ G +YSA +FPS Sbjct: 244 NP-GADGAAQVGGGAPQPGAAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 302 Query: 262 FYPQSLVSNLDPGAALYLYRGPSAPPP 288 +P + + PG+ + GPS P Sbjct: 303 SFPLTAAA---PGSPFAPFLGPSYLTP 326 >gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 85.1 bits (209), Expect = 8e-17 Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 39/147 (26%) Query: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236 KPR+ARTAFT QL LE F +YLSV +R+ LA SL+LT+TQVK W+QNRRTKWK+Q Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243 Query: 237 TAVGLELLAEAG-----------------------------------NYSALQRMFPSPY 261 G + A+ G +YSA +FPS Sbjct: 244 NP-GADGAAQVGGGAPQPGAAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 302 Query: 262 FYPQSLVSNLDPGAALYLYRGPSAPPP 288 +P + + PG+ + GPS P Sbjct: 303 SFPLTAAA---PGSPFAPFLGPSYLTP 326 >gi|153218470 BarH-like homeobox 1 [Homo sapiens] Length = 254 Score = 84.7 bits (208), Expect = 1e-16 Identities = 39/65 (60%), Positives = 49/65 (75%) Query: 171 PPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRR 230 P + KK R++RT FT+ QL LE+ FE+QKYLS DR++LA SL L+ QVKTWYQNRR Sbjct: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194 Query: 231 TKWKR 235 KWK+ Sbjct: 195 MKWKK 199 >gi|157743259 H6 family homeobox 3 [Homo sapiens] Length = 357 Score = 84.3 bits (207), Expect = 1e-16 Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 11/148 (7%) Query: 144 SGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYL 203 +G++ + + E+ + S P R KK RT F+ Q+ QLE +F+ ++YL Sbjct: 196 AGASVGAAAATPGAEDWKKGAESPEKKPACRKKK---TRTVFSRSQVFQLESTFDMKRYL 252 Query: 204 SVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFY 263 S +R LAASL+LT+TQVK W+QNRR KWKRQ A LE A +++A QR+ P Y Sbjct: 253 SSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELE--AANLSHAAAQRIVRVPILY 310 Query: 264 PQSLVSNLDPGAALYLYRGPSAPPPALQ 291 ++ + GAA AP P Q Sbjct: 311 HENSAAE---GAAA---AAAGAPVPVSQ 332 >gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] Length = 330 Score = 84.3 bits (207), Expect = 1e-16 Identities = 41/78 (52%), Positives = 53/78 (67%) Query: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236 K +K RT+FT Q+ +LE+ F RQKYL+ +R LA +L +TD QVKTW+QNRRTKW+RQ Sbjct: 200 KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 259 Query: 237 TAVGLELLAEAGNYSALQ 254 TA E + N LQ Sbjct: 260 TAEEREAERQQANRILLQ 277 >gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo sapiens] Length = 406 Score = 82.8 bits (203), Expect = 4e-16 Identities = 57/153 (37%), Positives = 76/153 (49%), Gaps = 14/153 (9%) Query: 176 KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKR 235 ++ R+ RTAFT QL +LE F+ +Y V R LAA LNLT+ +V+ W+QNRR KWKR Sbjct: 137 ERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKR 196 Query: 236 -QTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAP-PPALQRP 293 Q + L A A L Y+ + LDP ++L P P PP L P Sbjct: 197 NQRVLMLRNTATADLAHPLDMFLGGAYYAAPA----LDPALCVHLV--PQLPRPPVLPVP 250 Query: 294 LVPRILIHGLQGASEPPPPLPPLAGVLPRAAQP 326 +P + P PP PP+A + P A P Sbjct: 251 PMPP------RPPMVPMPPRPPIAPMPPMAPVP 277 >gi|70608170 H6 family homeobox 2 [Homo sapiens] Length = 273 Score = 82.0 bits (201), Expect = 6e-16 Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 31/153 (20%) Query: 150 SDSEYKVKEEGDREISSSRDSPPVRLKKP-----------RKARTAFTDHQLAQLERSFE 198 S S KEE +R + + SP + +K RT F+ Q+ QLE +F+ Sbjct: 110 SPSHSDFKEEKERLLPAGSPSPGSERPRDGGAERQAGAAKKKTRTVFSRSQVYQLESTFD 169 Query: 199 RQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLEL--LAEAG-------- 248 ++YLS +R LA+SL LT+TQVKTW+QNRR KWKRQ + LE +A A Sbjct: 170 MKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTLVSMP 229 Query: 249 ---NYSALQRM-------FPSPYFYPQSLVSNL 271 S+L R+ FP+P +YP S +S L Sbjct: 230 LVFRDSSLLRVPVPRSLAFPAPLYYPGSNLSAL 262 >gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] Length = 291 Score = 82.0 bits (201), Expect = 6e-16 Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 3/97 (3%) Query: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236 K +K RT+F+ Q+ +LE+ F RQKYL+ +R LA SL +TD QVKTW+QNRRTKW+RQ Sbjct: 165 KRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQ 224 Query: 237 TAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDP 273 TA E + + LQ + + +SL ++ P Sbjct: 225 TAEEREAERQQASRLMLQLQHDA---FQKSLNDSIQP 258 >gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] Length = 483 Score = 80.9 bits (198), Expect = 1e-15 Identities = 70/266 (26%), Positives = 106/266 (39%), Gaps = 32/266 (12%) Query: 60 ETGTPRPGGASG-------PGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACA 112 ETG+ RPG G P ++ ++ + P L++D + D + + + Sbjct: 92 ETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVS 151 Query: 113 PYSS---SGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRD 169 S S E L K AE+ K S S+ + + +I S D Sbjct: 152 SISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPD 211 Query: 170 SPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229 P R K R++RT FT QL +LER+FER Y + R ELA LT+ +V+ W+ NR Sbjct: 212 LPLKR--KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNR 269 Query: 230 RTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPA 289 R +W++Q A A A + P +P + + L P++ P A Sbjct: 270 RARWRKQ--------AGANQLMAFNHLIPGG--FPPTAMPTLPTYQLSETSYQPTSIPQA 319 Query: 290 LQRPLVPRILIHGLQGASEPPPPLPP 315 + P P PLPP Sbjct: 320 VSDP----------SSTVHRPQPLPP 335 >gi|63054872 ladybird homeobox 1 [Homo sapiens] Length = 281 Score = 80.9 bits (198), Expect = 1e-15 Identities = 67/192 (34%), Positives = 87/192 (45%), Gaps = 30/192 (15%) Query: 63 TPRPGGASGPGLDSHLQP-GQLSAPAQSRTVTSSFLIRDILADCKP-------------- 107 T + G + PG + P L PA S + F I DIL KP Sbjct: 2 TSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILN--KPSVRRSYSLCGAAHL 59 Query: 108 LAACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDRE---- 163 LAA ++ G P A GR L++ S E V + + Sbjct: 60 LAAADKHAQGGLPLA----GRALLSQTSPLC-ALEELASKTFKGLEVSVLQAAEGRDGMT 114 Query: 164 ISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVK 223 I R +P KK RK+RTAFT+HQ+ +LE+ F QKYLS DR ++A L LT+ QV Sbjct: 115 IFGQRQTP----KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVI 170 Query: 224 TWYQNRRTKWKR 235 TW+QNRR K KR Sbjct: 171 TWFQNRRAKLKR 182 >gi|84105335 mesenchyme homeobox 2 [Homo sapiens] Length = 304 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/131 (37%), Positives = 66/131 (50%), Gaps = 14/131 (10%) Query: 105 CKPLAACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREI 164 C ++ + +G AP GR A AE + +SG SDS + E+ Sbjct: 128 CSNSSSLGSSTPTGAACAPGDYGRQALSPAEAEK----RSGGKRKSDSSDSQEGNYKSEV 183 Query: 165 SSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKT 224 +S KPRK RTAFT Q+ +LE F YL+ R E+A +L+LT+ QVK Sbjct: 184 NS----------KPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKV 233 Query: 225 WYQNRRTKWKR 235 W+QNRR KWKR Sbjct: 234 WFQNRRMKWKR 244 >gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] Length = 403 Score = 80.5 bits (197), Expect = 2e-15 Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 33/267 (12%) Query: 60 ETGTPRPGGASG--------PGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAAC 111 ETG+ RPG G P ++ ++ + P L++D + D + + Sbjct: 92 ETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSV 151 Query: 112 APYSS---SGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSR 168 + S S E L K AE+ K S S+ + + +I S Sbjct: 152 SSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEP 211 Query: 169 DSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 228 D P R K R++RT FT QL +LER+FER Y + R ELA LT+ +V+ W+ N Sbjct: 212 DLPLKR--KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSN 269 Query: 229 RRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPP 288 RR +W++Q A A A + P +P + + L P++ P Sbjct: 270 RRARWRKQ--------AGANQLMAFNHLIPGG--FPPTAMPTLPTYQLSETSYQPTSIPQ 319 Query: 289 ALQRPLVPRILIHGLQGASEPPPPLPP 315 A+ P P PLPP Sbjct: 320 AVSDP----------SSTVHRPQPLPP 336 >gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] Length = 407 Score = 80.5 bits (197), Expect = 2e-15 Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 33/267 (12%) Query: 60 ETGTPRPGGASG--------PGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAAC 111 ETG+ RPG G P ++ ++ + P L++D + D + + Sbjct: 92 ETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSV 151 Query: 112 APYSS---SGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSR 168 + S S E L K AE+ K S S+ + + +I S Sbjct: 152 SSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEP 211 Query: 169 DSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 228 D P R K R++RT FT QL +LER+FER Y + R ELA LT+ +V+ W+ N Sbjct: 212 DLPLKR--KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSN 269 Query: 229 RRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPP 288 RR +W++Q A A A + P +P + + L P++ P Sbjct: 270 RRARWRKQ--------AGANQLMAFNHLIPGG--FPPTAMPTLPTYQLSETSYQPTSIPQ 319 Query: 289 ALQRPLVPRILIHGLQGASEPPPPLPP 315 A+ P P PLPP Sbjct: 320 AVSDP----------SSTVHRPQPLPP 336 >gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] Length = 505 Score = 80.5 bits (197), Expect = 2e-15 Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 33/267 (12%) Query: 60 ETGTPRPGGASG--------PGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAAC 111 ETG+ RPG G P ++ ++ + P L++D + D + + Sbjct: 92 ETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSV 151 Query: 112 APYSS---SGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSR 168 + S S E L K AE+ K S S+ + + +I S Sbjct: 152 SSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEP 211 Query: 169 DSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 228 D P R K R++RT FT QL +LER+FER Y + R ELA LT+ +V+ W+ N Sbjct: 212 DLPLKR--KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSN 269 Query: 229 RRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPP 288 RR +W++Q A A A + P +P + + L P++ P Sbjct: 270 RRARWRKQ--------AGANQLMAFNHLIPGG--FPPTAMPTLPTYQLSETSYQPTSIPQ 319 Query: 289 ALQRPLVPRILIHGLQGASEPPPPLPP 315 A+ P P PLPP Sbjct: 320 AVSDP----------SSTVHRPQPLPP 336 >gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] Length = 484 Score = 80.5 bits (197), Expect = 2e-15 Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 33/267 (12%) Query: 60 ETGTPRPGGASG--------PGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAAC 111 ETG+ RPG G P ++ ++ + P L++D + D + + Sbjct: 92 ETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSV 151 Query: 112 APYSS---SGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSR 168 + S S E L K AE+ K S S+ + + +I S Sbjct: 152 SSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEP 211 Query: 169 DSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 228 D P R K R++RT FT QL +LER+FER Y + R ELA LT+ +V+ W+ N Sbjct: 212 DLPLKR--KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSN 269 Query: 229 RRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPP 288 RR +W++Q A A A + P +P + + L P++ P Sbjct: 270 RRARWRKQ--------AGANQLMAFNHLIPGG--FPPTAMPTLPTYQLSETSYQPTSIPQ 319 Query: 289 ALQRPLVPRILIHGLQGASEPPPPLPP 315 A+ P P PLPP Sbjct: 320 AVSDP----------SSTVHRPQPLPP 336 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.131 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,201,295 Number of Sequences: 37866 Number of extensions: 964569 Number of successful extensions: 6297 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 317 Number of HSP's successfully gapped in prelim test: 268 Number of HSP's that attempted gapping in prelim test: 5253 Number of HSP's gapped (non-prelim): 1237 length of query: 327 length of database: 18,247,518 effective HSP length: 103 effective length of query: 224 effective length of database: 14,347,320 effective search space: 3213799680 effective search space used: 3213799680 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.