Guide to the Human Genome
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Name: ELP2 Sequence: fasta or formatted (826aa) NCBI GI: 8922735
Description:

elongator protein 2

Referenced in:

RNA Polymerase and General Transcription Factors
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         55           3
 C cysteine            3.9         32           2
 D aspartate           5.4         45           3
 E glutamate           5.9         49           3
 F phenylalanine       4.5         37           2
 G glycine             5.9         49           2
 H histidine           3.5         29           1
 I isoleucine          5.0         41           2
 K lysine              4.8         40           2
 L leucine             8.8         73           2
 M methionine          0.8          7           1
 N asparagine          4.5         37           1
 P proline             4.1         34           2
 Q glutamine           5.2         43           2
 R arginine            3.5         29           2
 S serine              7.4         61           2
 T threonine           6.2         51           2
 V valine              8.8         73           3
 W tryptophan          3.4         28           1
 Y tyrosine            1.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elongator protein 2 
CIAO1                 0.026   WD repeat domain 39 
PAFAH1B1              0.021   platelet-activating factor acetylhydrolase, isoform I...
APAF1                 0.019   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.019   apoptotic peptidase activating factor 1 isoform b [Ho...
NLE1                  0.019   Notchless gene homolog isoform a 
APAF1                 0.019   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.019   apoptotic peptidase activating factor 1 isoform a [Ho...
WDR38                 0.018   WD repeat domain 38 
TBL1X                 0.018   transducin beta-like 1X isoform b 
TBL1X                 0.018   transducin beta-like 1X isoform b 
TBL1X                 0.018   transducin beta-like 1X isoform a 
TBL1X                 0.018   transducin beta-like 1X isoform a 
WSB2                  0.018   WD SOCS-box protein 2 
WDSUB1                0.018   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.018   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.018   WD repeat, sterile alpha motif and U-box domain con...
TBL1XR1               0.016   transducin (beta)-like 1 X-linked receptor 1 
WDR5B                 0.016   WD repeat domain 5B 
WDR51B                0.016   WD repeat domain 51B 
TBL1Y                 0.015   transducin beta-like 1Y 
TBL1Y                 0.015   transducin beta-like 1Y 
TBL1Y                 0.015   transducin beta-like 1Y 
GNB2L1                0.015   guanine nucleotide binding protein (G protein), beta ...
WDR5                  0.015   WD repeat domain 5 
WDR5                  0.015   WD repeat domain 5 
WDR51A                0.014   WD repeat domain 51A isoform 3 
WDR51A                0.014   WD repeat domain 51A isoform 2 
WDR51A                0.014   WD repeat domain 51A isoform 1 
WDR48                 0.014   WD repeat domain 48 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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