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Search of human proteins with 8922673
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922673 parvin, alpha [Homo sapiens]
(372 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922673 parvin, alpha [Homo sapiens] 729 0.0
gi|20127528 parvin, beta isoform b [Homo sapiens] 543 e-154
gi|51477696 parvin, beta isoform a [Homo sapiens] 495 e-140
gi|212286181 parvin, gamma [Homo sapiens] 253 3e-67
gi|212286179 parvin, gamma [Homo sapiens] 253 3e-67
gi|11545879 parvin, gamma [Homo sapiens] 253 3e-67
gi|4557241 actinin, alpha 3 [Homo sapiens] 50 2e-06
gi|4501893 actinin, alpha 2 [Homo sapiens] 49 9e-06
gi|12025678 actinin, alpha 4 [Homo sapiens] 47 4e-05
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 46 5e-05
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens] 46 5e-05
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens] 46 5e-05
gi|33188445 microfilament and actin filament cross-linker protei... 43 4e-04
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 43 5e-04
gi|169218211 PREDICTED: similar to plectin 1, partial [Homo sapi... 42 7e-04
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 42 7e-04
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 42 7e-04
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 42 7e-04
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ... 42 9e-04
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 42 0.001
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ... 41 0.002
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 41 0.002
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 41 0.002
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 41 0.002
gi|188595687 gamma filamin isoform b [Homo sapiens] 41 0.002
gi|116805322 gamma filamin isoform a [Homo sapiens] 41 0.002
gi|34577047 dystonin isoform 1 [Homo sapiens] 41 0.002
gi|120953251 neuron navigator 3 [Homo sapiens] 41 0.002
gi|83816971 DIX domain containing 1 isoform a [Homo sapiens] 40 0.003
gi|221316624 dystonin isoform 4 [Homo sapiens] 40 0.003
>gi|8922673 parvin, alpha [Homo sapiens]
Length = 372
Score = 729 bits (1882), Expect = 0.0
Identities = 372/372 (100%), Positives = 372/372 (100%)
Query: 1 MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLP 60
MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLP
Sbjct: 1 MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLP 60
Query: 61 LSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLA 120
LSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLA
Sbjct: 61 LSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLA 120
Query: 121 EDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVD 180
EDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVD
Sbjct: 121 EDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVD 180
Query: 181 SVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEA 240
SVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEA
Sbjct: 181 SVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEA 240
Query: 241 LSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLM 300
LSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLM
Sbjct: 241 LSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLM 300
Query: 301 GLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRV 360
GLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRV
Sbjct: 301 GLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRV 360
Query: 361 LYNLFTKYRNVE 372
LYNLFTKYRNVE
Sbjct: 361 LYNLFTKYRNVE 372
>gi|20127528 parvin, beta isoform b [Homo sapiens]
Length = 364
Score = 543 bits (1398), Expect = e-154
Identities = 272/363 (74%), Positives = 316/363 (87%), Gaps = 1/363 (0%)
Query: 10 SVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLPLSPIPFELD 69
S P+SPTP+ P KKD+SFLGKLGGTLAR+++A+EVS+LQEEG NAIN P+SP ++
Sbjct: 3 SAPRSPTPR-PRRMKKDESFLGKLGGTLARKRRAREVSDLQEEGKNAINSPMSPALVDVH 61
Query: 70 PEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVL 129
PEDT LEENE RTM+DP S+ DPK +EL+KVL+DWINDVLV ERIIVK L EDLYDGQVL
Sbjct: 62 PEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWINDVLVEERIIVKQLEEDLYDGQVL 121
Query: 130 QKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVA 189
QKL EKL KLNVAEVTQSEI QKQKLQTVLE +++ L+ +++W+VDS+H K+LVA
Sbjct: 122 QKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVHDLLRPRGWALRWSVDSIHGKNLVA 181
Query: 190 ILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEALSGRHERDA 249
ILHLLV+L+ +FRAPIRLP+HV++QVVVV+KREG+L S I EE+T TE + GR ERDA
Sbjct: 182 ILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLLHSSHISEELTTTTEMMMGRFERDA 241
Query: 250 FDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVP 309
FDTLFDHAPDKL+VVKK+LITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLE YFVP
Sbjct: 242 FDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVP 301
Query: 310 LHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
LH F+LTP+SF+QKV NVSFAFELM DGGL+KPK RPED+VN DLKSTLRVLYNLFTKY+
Sbjct: 302 LHHFYLTPESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYK 361
Query: 370 NVE 372
NVE
Sbjct: 362 NVE 364
>gi|51477696 parvin, beta isoform a [Homo sapiens]
Length = 397
Score = 495 bits (1275), Expect = e-140
Identities = 248/327 (75%), Positives = 285/327 (87%)
Query: 46 VSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWI 105
VS+LQEEG NAIN P+SP ++ PEDT LEENE RTM+DP S+ DPK +EL+KVL+DWI
Sbjct: 71 VSDLQEEGKNAINSPMSPALVDVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWI 130
Query: 106 NDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKIN 165
NDVLV ERIIVK L EDLYDGQVLQKL EKL KLNVAEVTQSEI QKQKLQTVLE ++
Sbjct: 131 NDVLVEERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVH 190
Query: 166 ETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGIL 225
+ L+ +++W+VDS+H K+LVAILHLLV+L+ +FRAPIRLP+HV++QVVVV+KREG+L
Sbjct: 191 DLLRPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLL 250
Query: 226 QSRQIQEEITGNTEALSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTE 285
S I EE+T TE + GR ERDAFDTLFDHAPDKL+VVKK+LITFVNKHLNKLNLEVTE
Sbjct: 251 HSSHISEELTTTTEMMMGRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTE 310
Query: 286 LETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPR 345
LETQFADGVYLVLLMGLLE YFVPLH F+LTP+SF+QKV NVSFAFELM DGGL+KPK R
Sbjct: 311 LETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKPKAR 370
Query: 346 PEDIVNCDLKSTLRVLYNLFTKYRNVE 372
PED+VN DLKSTLRVLYNLFTKY+NVE
Sbjct: 371 PEDVVNLDLKSTLRVLYNLFTKYKNVE 397
>gi|212286181 parvin, gamma [Homo sapiens]
Length = 331
Score = 253 bits (645), Expect = 3e-67
Identities = 131/301 (43%), Positives = 199/301 (66%), Gaps = 5/301 (1%)
Query: 70 PEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVL 129
P + L + + + P SR DPK +EL KVL++WIN L+ E I+V+ L ED++DG +L
Sbjct: 19 PAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLPEHIVVRSLEEDMFDGLIL 78
Query: 130 QKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVA 189
LF++L + KL ++ + +QK KL VLE +N +L+L KW+V+S+ K L++
Sbjct: 79 HHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLS 138
Query: 190 ILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEALSGRHE--R 247
LHLLVAL++ F+ + LP +V ++V+ ++ + L+S ++ E++ TE + + E +
Sbjct: 139 TLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLVEQL---TEYSTDKDEPPK 195
Query: 248 DAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYF 307
D FD LF AP+K+N VK+ ++ FVN+ L++L L V L+TQFADGV L+LL+G LEG+F
Sbjct: 196 DVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFF 255
Query: 308 VPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
+ L F+LTP+S + + NV+ A EL++D GL PEDIVN D KSTLRVLY LF K
Sbjct: 256 LHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCK 315
Query: 368 Y 368
+
Sbjct: 316 H 316
>gi|212286179 parvin, gamma [Homo sapiens]
Length = 331
Score = 253 bits (645), Expect = 3e-67
Identities = 131/301 (43%), Positives = 199/301 (66%), Gaps = 5/301 (1%)
Query: 70 PEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVL 129
P + L + + + P SR DPK +EL KVL++WIN L+ E I+V+ L ED++DG +L
Sbjct: 19 PAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLPEHIVVRSLEEDMFDGLIL 78
Query: 130 QKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVA 189
LF++L + KL ++ + +QK KL VLE +N +L+L KW+V+S+ K L++
Sbjct: 79 HHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLS 138
Query: 190 ILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEALSGRHE--R 247
LHLLVAL++ F+ + LP +V ++V+ ++ + L+S ++ E++ TE + + E +
Sbjct: 139 TLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLVEQL---TEYSTDKDEPPK 195
Query: 248 DAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYF 307
D FD LF AP+K+N VK+ ++ FVN+ L++L L V L+TQFADGV L+LL+G LEG+F
Sbjct: 196 DVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFF 255
Query: 308 VPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
+ L F+LTP+S + + NV+ A EL++D GL PEDIVN D KSTLRVLY LF K
Sbjct: 256 LHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCK 315
Query: 368 Y 368
+
Sbjct: 316 H 316
>gi|11545879 parvin, gamma [Homo sapiens]
Length = 331
Score = 253 bits (645), Expect = 3e-67
Identities = 131/301 (43%), Positives = 199/301 (66%), Gaps = 5/301 (1%)
Query: 70 PEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVL 129
P + L + + + P SR DPK +EL KVL++WIN L+ E I+V+ L ED++DG +L
Sbjct: 19 PAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLPEHIVVRSLEEDMFDGLIL 78
Query: 130 QKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVA 189
LF++L + KL ++ + +QK KL VLE +N +L+L KW+V+S+ K L++
Sbjct: 79 HHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLS 138
Query: 190 ILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEALSGRHE--R 247
LHLLVAL++ F+ + LP +V ++V+ ++ + L+S ++ E++ TE + + E +
Sbjct: 139 TLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLVEQL---TEYSTDKDEPPK 195
Query: 248 DAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYF 307
D FD LF AP+K+N VK+ ++ FVN+ L++L L V L+TQFADGV L+LL+G LEG+F
Sbjct: 196 DVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFF 255
Query: 308 VPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
+ L F+LTP+S + + NV+ A EL++D GL PEDIVN D KSTLRVLY LF K
Sbjct: 256 LHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCK 315
Query: 368 Y 368
+
Sbjct: 316 H 316
>gi|4557241 actinin, alpha 3 [Homo sapiens]
Length = 901
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L D A +K +KT + N HL K ++ +E F +G+ L+LL+ ++ G +P
Sbjct: 36 DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLP- 92
Query: 311 HSFFLTPDSFE---QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
PD + K+ NV+ A + + G++ E+IV+ +LK TL +++ + +
Sbjct: 93 -----RPDKGKMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILR 147
Query: 368 Y 368
+
Sbjct: 148 F 148
>gi|4501893 actinin, alpha 2 [Homo sapiens]
Length = 894
Score = 48.5 bits (114), Expect = 9e-06
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L D A +K +KT + N HL K ++ +E F +G+ L+LL+ ++ G +P
Sbjct: 29 DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLP- 85
Query: 311 HSFFLTPDSFE---QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
PD + K+ NV+ A + + G++ E+IV+ ++K TL +++ + +
Sbjct: 86 -----KPDRGKMRFHKIANVNKALDYIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILR 140
Query: 368 Y 368
+
Sbjct: 141 F 141
>gi|12025678 actinin, alpha 4 [Homo sapiens]
Length = 911
Score = 46.6 bits (109), Expect = 4e-05
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L D A +K +KT + N HL K ++ ++ F DG+ L+LL+ ++ G +P
Sbjct: 41 DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLP- 97
Query: 311 HSFFLTPDSFE---QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
P+ + K+ NV+ A + + G++ E+IV+ + K TL +++ + +
Sbjct: 98 -----KPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILR 152
Query: 368 Y 368
+
Sbjct: 153 F 153
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 46.2 bits (108), Expect = 5e-05
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L D A +K +KT + N HL K ++ +E F DG+ L+LL+ ++ G
Sbjct: 22 DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISG----- 74
Query: 311 HSFFLTPDSFE---QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
P+ + K+ NV+ A + + G++ E+IV+ ++K TL +++ + +
Sbjct: 75 -ERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILR 133
Query: 368 Y 368
+
Sbjct: 134 F 134
>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
Length = 914
Score = 46.2 bits (108), Expect = 5e-05
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L D A +K +KT + N HL K ++ +E F DG+ L+LL+ ++ G
Sbjct: 22 DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISG----- 74
Query: 311 HSFFLTPDSFE---QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
P+ + K+ NV+ A + + G++ E+IV+ ++K TL +++ + +
Sbjct: 75 -ERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILR 133
Query: 368 Y 368
+
Sbjct: 134 F 134
>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
Length = 892
Score = 46.2 bits (108), Expect = 5e-05
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L D A +K +KT + N HL K ++ +E F DG+ L+LL+ ++ G
Sbjct: 22 DLLLDPAWEKQQ--RKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISG----- 74
Query: 311 HSFFLTPDSFE---QKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTK 367
P+ + K+ NV+ A + + G++ E+IV+ ++K TL +++ + +
Sbjct: 75 -ERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILR 133
Query: 368 Y 368
+
Sbjct: 134 F 134
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 43.1 bits (100), Expect = 4e-04
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 257 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 316
A ++ V KKT +VNKHL K+ + +L DG L+ L+ +L G +P +
Sbjct: 73 ADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMR 132
Query: 317 PDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
++ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 133 ----FHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQ 181
Score = 35.0 bits (79), Expect = 0.11
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 61 LSPIPFELDPEDTM-----LEENEVR----TMVDPNSRS-----DPKLQELMKVLIDWIN 106
LSP P P DT+ L E + R +++DP R+ D + + K W+N
Sbjct: 34 LSPCP----PGDTLPWNLPLHEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVN 89
Query: 107 DVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
L+ R + DL EDL DG L L E L KL
Sbjct: 90 KHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKL 124
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 42.7 bits (99), Expect = 5e-04
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 255 DHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFF 314
D ++ V KKT +VNKHL K +++L DG L+ L+ +L G +P
Sbjct: 35 DEQDERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGR 94
Query: 315 LTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
+ K+ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 95 MR----FHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQ 145
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 99 KVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
K W+N L+ + + DL EDL DG L L E L + L
Sbjct: 46 KTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSL 88
>gi|169218211 PREDICTED: similar to plectin 1, partial [Homo
sapiens]
Length = 1369
Score = 42.4 bits (98), Expect = 7e-04
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 225 LQSRQIQEEITGNTEALSGRHERDAFDTLFDHAP---DKLNVVKKTLITFVNKHLNKLNL 281
L R+ EE++ T + +R + AP ++ V KKT +VNKHL K
Sbjct: 135 LYRRKELEEVSPETPVVPATTQRTLARPGPEPAPATDERDRVQKKTSTKWVNKHLIKAQR 194
Query: 282 EVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEK 341
+++L DG L+ L+ +L G +P + K+ NV A + ++ ++
Sbjct: 195 HISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMR----FHKLQNVQIALDYLRHRQVKL 250
Query: 342 PKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
R +DI + + K TL +++ + ++
Sbjct: 251 VNIRNDDIADGNPKLTLGLIWTIILHFQ 278
Score = 37.4 bits (85), Expect = 0.022
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 67 ELDPEDTMLEENEVRTMVDPNSRSDPKLQEL----MKVLIDWINDVLVGERIIVKDLAED 122
E+ PE ++ RT+ P P E K W+N L+ + + DL ED
Sbjct: 143 EVSPETPVVPATTQRTLARPGPEPAPATDERDRVQKKTSTKWVNKHLIKAQRHISDLYED 202
Query: 123 LYDGQVLQKLFEKLESEKL 141
L DG L L E L + L
Sbjct: 203 LRDGHNLISLLEVLSGDSL 221
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 42.4 bits (98), Expect = 7e-04
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 228 RQIQEEITGNTEALSGRHERDAFDTLFDHAP---DKLNVVKKTLITFVNKHLNKLNLEVT 284
R+ EE++ T + +R + AP ++ V KKT +VNKHL K ++
Sbjct: 142 RKELEEVSPETPVVPATTQRTLARPGPEPAPATDERDRVQKKTFTKWVNKHLIKAQRHIS 201
Query: 285 ELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKP 344
+L DG L+ L+ +L G +P + K+ NV A + ++ ++
Sbjct: 202 DLYEDLRDGHNLISLLEVLSGDSLPREKGRMR----FHKLQNVQIALDYLRHRQVKLVNI 257
Query: 345 RPEDIVNCDLKSTLRVLYNLFTKYR 369
R +DI + + K TL +++ + ++
Sbjct: 258 RNDDIADGNPKLTLGLIWTIILHFQ 282
Score = 38.1 bits (87), Expect = 0.013
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 67 ELDPEDTMLEENEVRTMVDPNSRSDPKLQEL----MKVLIDWINDVLVGERIIVKDLAED 122
E+ PE ++ RT+ P P E K W+N L+ + + DL ED
Sbjct: 147 EVSPETPVVPATTQRTLARPGPEPAPATDERDRVQKKTFTKWVNKHLIKAQRHISDLYED 206
Query: 123 LYDGQVLQKLFEKLESEKL 141
L DG L L E L + L
Sbjct: 207 LRDGHNLISLLEVLSGDSL 225
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 42.4 bits (98), Expect = 7e-04
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 227 SRQIQEEITGNTEALSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTEL 286
SR IQ EI+ S + ERD V KKT +VNKHL K +++L
Sbjct: 4 SRAIQNEIS------SLKDERD-------------RVQKKTFTKWVNKHLIKAQRHISDL 44
Query: 287 ETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRP 346
DG L+ L+ +L G +P + K+ NV A + ++ ++ R
Sbjct: 45 YEDLRDGHNLISLLEVLSGDSLPREKGRMR----FHKLQNVQIALDYLRHRQVKLVNIRN 100
Query: 347 EDIVNCDLKSTLRVLYNLFTKYR 369
+DI + + K TL +++ + ++
Sbjct: 101 DDIADGNPKLTLGLIWTIILHFQ 123
Score = 33.9 bits (76), Expect = 0.24
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 68 LDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQ 127
+DP + +NE+ ++ D R K W+N L+ + + DL EDL DG
Sbjct: 1 MDPSRAI--QNEISSLKDERDRVQKK------TFTKWVNKHLIKAQRHISDLYEDLRDGH 52
Query: 128 VLQKLFEKLESEKL 141
L L E L + L
Sbjct: 53 NLISLLEVLSGDSL 66
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 42.4 bits (98), Expect = 7e-04
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 257 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 316
A ++ V KKT +VNKHL K +++L DG L+ L+ +L G +P +
Sbjct: 64 ADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMR 123
Query: 317 PDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
K+ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 124 ----FHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQ 172
Score = 32.3 bits (72), Expect = 0.70
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 82 TMVDPNSRS-----DPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKL 136
+++DP R+ D + + K W+N L+ + + DL EDL DG L L E L
Sbjct: 51 SVLDPAERAVIRIADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVL 110
Query: 137 ESEKL 141
+ L
Sbjct: 111 SGDSL 115
>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
sapiens]
Length = 2364
Score = 42.0 bits (97), Expect = 9e-04
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 257 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 316
A ++ V KKT +VN HL +++ +T+L T DG L+ L+ +L G +P
Sbjct: 49 ADEREAVQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLP------K 102
Query: 317 PDSFEQKV---LNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
P ++ NV A + +++ + DIV+ + + TL +++ + +++
Sbjct: 103 PTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQ 158
Score = 33.1 bits (74), Expect = 0.41
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 99 KVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
K W+N L + DL DL DG++L KL E L E+L
Sbjct: 58 KTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERL 100
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 258 PDKLN-VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 316
PD+ + V KKT +VNKHL K +++L DG L+ L+ +L G +P +
Sbjct: 5 PDERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMR 64
Query: 317 PDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
K+ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 65 ----FHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQ 113
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 99 KVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
K W+N L+ + + DL EDL DG L L E L + L
Sbjct: 14 KTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSL 56
>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
sapiens]
Length = 2155
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 263 VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQ 322
V KKT +VN HL +++ +T+L T DG L+ L+ +L G +P P
Sbjct: 42 VQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLP------KPTKGRM 95
Query: 323 KV---LNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
++ NV A + +++ + DIV+ + + TL +++ + +++
Sbjct: 96 RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQ 145
Score = 33.1 bits (74), Expect = 0.41
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 99 KVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
K W+N L + DL DL DG++L KL E L E+L
Sbjct: 45 KTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERL 87
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 263 VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQ 322
V KKT +VNKHL K +++L DG L+ L+ +L G +P +
Sbjct: 43 VQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMR----FH 98
Query: 323 KVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
K+ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 99 KLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQ 145
Score = 32.7 bits (73), Expect = 0.54
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 63 PIPFELDPEDTMLEENEVRTMVDPNS-RSDPKLQELMKVLIDWINDVLVGERIIVKDLAE 121
P P L + T E+N ++ + + D + + K W+N L+ + + DL E
Sbjct: 9 PQPEGLGRKRTSSEDNLYLAVLRASEGKKDERDRVQKKTFTKWVNKHLIKAQRHISDLYE 68
Query: 122 DLYDGQVLQKLFEKLESEKL 141
DL DG L L E L + L
Sbjct: 69 DLRDGHNLISLLEVLSGDSL 88
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 263 VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQ 322
V KKT +VNKHL K +++L DG L+ L+ +L G +P +
Sbjct: 47 VQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMR----FH 102
Query: 323 KVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
K+ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 103 KLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQ 149
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 99 KVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
K W+N L+ + + DL EDL DG L L E L + L
Sbjct: 50 KTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSL 92
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 263 VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQ 322
V KKT +VNKHL K +++L DG L+ L+ +L G +P +
Sbjct: 29 VQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMR----FH 84
Query: 323 KVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
K+ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 85 KLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQ 131
Score = 32.7 bits (73), Expect = 0.54
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 63 PIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAED 122
P+P D +D + EVR D + + K W+N L+ + + DL ED
Sbjct: 4 PLP---DEQDFIQAYEEVR-----EKYKDERDRVQKKTFTKWVNKHLIKAQRHISDLYED 55
Query: 123 LYDGQVLQKLFEKLESEKL 141
L DG L L E L + L
Sbjct: 56 LRDGHNLISLLEVLSGDSL 74
>gi|188595687 gamma filamin isoform b [Homo sapiens]
Length = 2692
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 253 LFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHS 312
L + AP K + + T + N+HL + +T+L+ +DG+ L+ L+ +L +
Sbjct: 28 LAEDAPWK-KIQQNTFTRWCNEHLKCVGKRLTDLQRDLSDGLRLIALLEVLSQKRM-YRK 85
Query: 313 FFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKY 368
F P+ + K+ NVS A E ++ ++ + IV+ +LK L +++ L Y
Sbjct: 86 FHPRPNFRQMKLENVSVALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHY 141
>gi|116805322 gamma filamin isoform a [Homo sapiens]
Length = 2725
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 253 LFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHS 312
L + AP K + + T + N+HL + +T+L+ +DG+ L+ L+ +L +
Sbjct: 28 LAEDAPWK-KIQQNTFTRWCNEHLKCVGKRLTDLQRDLSDGLRLIALLEVLSQKRM-YRK 85
Query: 313 FFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKY 368
F P+ + K+ NVS A E ++ ++ + IV+ +LK L +++ L Y
Sbjct: 86 FHPRPNFRQMKLENVSVALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHY 141
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 40.8 bits (94), Expect = 0.002
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 251 DTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPL 310
D L + ++ V KKT ++N+HL K+ V +L DG L+ L+ +L G +P
Sbjct: 24 DVLERYKDERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPR 83
Query: 311 HSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
+ ++ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 84 EKGRMR----FHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQ 138
Score = 32.3 bits (72), Expect = 0.70
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 99 KVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
K WIN L+ R V DL EDL DG L L E L + L
Sbjct: 39 KTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTL 81
>gi|120953251 neuron navigator 3 [Homo sapiens]
Length = 2363
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 93 KLQELMKVLIDWINDVLV--GERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSE 150
K +E K+ DW N L G + ++KDL +D+ DG +L ++ + + +EK V ++
Sbjct: 75 KEKEDSKIYTDWANHYLAKSGHKRLIKDLQQDIADGVLLAEIIQIIANEK--VEDINGCP 132
Query: 151 IAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQY 200
+Q Q ++ V ++ + + + +L AIL L +LS+Y
Sbjct: 133 RSQSQMIENVDVCLSFLAARGVNVQGLSAEEIRNGNLKAILGLFFSLSRY 182
>gi|83816971 DIX domain containing 1 isoform a [Homo sapiens]
Length = 683
Score = 40.0 bits (92), Expect = 0.003
Identities = 29/112 (25%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 95 QELMKVLIDWINDVLVGERII--VKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQ-SEI 151
++ ++ + W+N L + V+DL +DL DG +L L E + EKL+ +++ ++
Sbjct: 20 EQQLQAYVAWVNAQLKKRPAVKPVQDLRQDLRDGVILAYLIEIVAGEKLSGVQLSPGNQQ 79
Query: 152 AQKQKLQTVLEKI-NETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFR 202
K ++ VL+ + ++ +++ S K VD +L +I+ L++AL+ +F+
Sbjct: 80 EMKNNVEKVLQFVASKKIRMHQTSAKDIVDG----NLKSIMRLVLALAAHFK 127
Score = 31.2 bits (69), Expect = 1.6
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 269 ITFVNKHLNKLNL--EVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLN 326
+ +VN L K V +L DGV L L+ ++ G L L+P + ++ N
Sbjct: 27 VAWVNAQLKKRPAVKPVQDLRQDLRDGVILAYLIEIVAGE--KLSGVQLSPGNQQEMKNN 84
Query: 327 VSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
V + + + + +DIV+ +LKS +R++ L ++
Sbjct: 85 VEKVLQFVASKKIRMHQTSAKDIVDGNLKSIMRLVLALAAHFK 127
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 257 APDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLT 316
A ++ V KKT ++N+HL K+ V +L DG L+ L+ +L G +P +
Sbjct: 59 ADERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMR 118
Query: 317 PDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYR 369
++ NV A + ++ ++ R +DI + + K TL +++ + ++
Sbjct: 119 ----FHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQ 167
Score = 37.0 bits (84), Expect = 0.029
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 48 ELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRS-----DPKLQELMKVLI 102
+ ++ +A P +P+ L + + + +++DP R+ D + + K
Sbjct: 12 DFSQKSGSASPAPGDTLPWNLPKHERSKRKIQGGSVLDPAERAVLRIADERDKVQKKTFT 71
Query: 103 DWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKL 141
WIN L+ R V DL EDL DG L L E L + L
Sbjct: 72 KWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTL 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,864,776
Number of Sequences: 37866
Number of extensions: 617150
Number of successful extensions: 3845
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 3715
Number of HSP's gapped (non-prelim): 181
length of query: 372
length of database: 18,247,518
effective HSP length: 104
effective length of query: 268
effective length of database: 14,309,454
effective search space: 3834933672
effective search space used: 3834933672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.