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Search of human proteins with 8922446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922446 THAP domain containing, apoptosis associated protein
1 isoform 1 [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922446 THAP domain containing, apoptosis associated protein ... 448 e-126
gi|13899259 THAP domain containing, apoptosis associated protein... 105 4e-23
gi|42734379 THAP domain containing, apoptosis associated protein... 97 1e-20
gi|31982895 THAP domain containing 4 [Homo sapiens] 82 4e-16
gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens] 72 5e-13
gi|22749337 THAP domain containing 8 [Homo sapiens] 67 9e-12
gi|40068500 THAP domain containing, apoptosis associated protein... 57 1e-08
gi|21389507 THAP domain containing 6 [Homo sapiens] 56 2e-08
gi|94536788 THAP domain containing 9 [Homo sapiens] 49 4e-06
gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens] 48 7e-06
gi|171906567 peripheral benzodiazepine receptor-associated prote... 44 1e-04
gi|171906559 peripheral benzodiazepine receptor-associated prote... 44 1e-04
gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens] 44 1e-04
gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens] 44 1e-04
gi|19923268 protein-kinase, interferon-inducible double stranded... 40 0.001
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|118918413 MICAL C-terminal like [Homo sapiens] 39 0.003
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 39 0.003
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 37 0.012
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 37 0.012
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora... 37 0.012
gi|221139761 zinc finger protein 853 [Homo sapiens] 36 0.028
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.036
gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo sap... 35 0.036
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 35 0.062
gi|239745496 PREDICTED: hypothetical protein XP_002343477 [Homo ... 35 0.062
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens] 35 0.062
gi|239745475 PREDICTED: similar to NPIP-like protein ENSP0000028... 35 0.062
gi|239745469 PREDICTED: nuclear pore complex interacting protein... 35 0.062
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 35 0.062
>gi|8922446 THAP domain containing, apoptosis associated protein 1
isoform 1 [Homo sapiens]
Length = 213
Score = 448 bits (1152), Expect = e-126
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTP 60
MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTP
Sbjct: 1 MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTP 60
Query: 61 DCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIGLLM 120
DCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIGLLM
Sbjct: 61 DCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIGLLM 120
Query: 121 PPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKL 180
PPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKL
Sbjct: 121 PPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKL 180
Query: 181 KEVVHFQKEKDDVSERGYVILPNDYFEIVEVPA 213
KEVVHFQKEKDDVSERGYVILPNDYFEIVEVPA
Sbjct: 181 KEVVHFQKEKDDVSERGYVILPNDYFEIVEVPA 213
>gi|13899259 THAP domain containing, apoptosis associated protein 2
[Homo sapiens]
Length = 228
Score = 105 bits (261), Expect = 4e-23
Identities = 64/180 (35%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 1 MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTP 60
M +C+A GC Y+K +SFH+FPL P KEW VRRKNF P K++ +CS+HF
Sbjct: 1 MPTNCAAAGCATTYNKHINISFHRFPLD-PKRRKEWVRLVRRKNFVPGKHTFLCSKHFEA 59
Query: 61 DCFKRECNNKLLKENAVPTIF-LCTEPHD---KKEDLLEPQEQLPPPPLPPPVSQVDAAI 116
CF + LK +AVPTIF CT K +LL+ P S + +
Sbjct: 60 SCFDLTGQTRRLKMDAVPTIFDFCTHIKSMKLKSRNLLKKNNSCSPAGPSNLKSNISSQ- 118
Query: 117 GLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQ 176
V +H+Y + M +KRI +LE+++ LR+K+KT Q+ RR R+
Sbjct: 119 -------------QVLLEHSYAFRNPMEAKKRIIKLEKEIASLRRKMKTCLQKERRATRR 165
>gi|42734379 THAP domain containing, apoptosis associated protein 3
[Homo sapiens]
Length = 175
Score = 97.1 bits (240), Expect = 1e-20
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 MVQSCSAYGCKNRYD-KDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFT 59
M +SC+A C NRY + K ++FH+FP +RP L KEW + R NFKP +++ ICSEHF
Sbjct: 1 MPKSCAARQCCNRYSSRRKQLTFHRFPFSRPELLKEWVLNIGRGNFKPKQHTVICSEHFR 60
Query: 60 PDCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQ 99
P+CF N K LK NAVPT+F +P + + +P +
Sbjct: 61 PECFSAFGNRKNLKHNAVPTVFAFQDPTQQVRENTDPASE 100
>gi|31982895 THAP domain containing 4 [Homo sapiens]
Length = 577
Score = 81.6 bits (200), Expect = 4e-16
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 1 MVQSCSAYGCKNRYDKD--KPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHF 58
MV C+A C NR K + VSFH+FPL +W AV+R N+ PTKYS +CSEHF
Sbjct: 1 MVICCAAVNCSNRQGKGEKRAVSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHF 60
Query: 59 TPDCFKR--ECNNKLLKENAVPTIFLCTE 85
T D F + E ++LLK AVP+IF TE
Sbjct: 61 TKDSFSKRLEDQHRLLKPTAVPSIFHLTE 89
Score = 31.6 bits (70), Expect = 0.52
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 30/186 (16%)
Query: 2 VQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPD 61
+ S +Y +++ +++P S + P+ R L K+ E + + P K +
Sbjct: 232 IGSLHSYSFSSKHTRERP-SVPREPIDRKRLKKDVEPSCSGSSLGPDKGLA--------- 281
Query: 62 CFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIGLLMP 121
+ P+ L P + P + P P V Q + + M
Sbjct: 282 -------------QSPPSSSLTATPQKPSQSPSAPPADVTPKPATEAV-QSEHSDASPMS 327
Query: 122 PLQTPVNLSVFCD-----HNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQ 176
+ ++ S C H+Y + + ++ L +QVEK +LK+ +QR R + Q
Sbjct: 328 INEVILSASGACKLIDSLHSYCFSSRQN-KSQVCCLREQVEKKNGELKSLRQRVSRSDSQ 386
Query: 177 LEKLKE 182
+ KL+E
Sbjct: 387 VRKLQE 392
>gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens]
Length = 395
Score = 71.6 bits (174), Expect = 5e-13
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 1 MVQSCSAYGCKNRY---DKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEH 57
M + C+A CKNR +KD+ +SF+ FPL ++W ++R ++ P+KY +CS+H
Sbjct: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH 60
Query: 58 FTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKE 91
FTPD + LK+ AVPTIF E + K+
Sbjct: 61 FTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKD 94
>gi|22749337 THAP domain containing 8 [Homo sapiens]
Length = 274
Score = 67.4 bits (163), Expect = 9e-12
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 1 MVQSCSAYGCKNRYDK----DKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSE 56
M + C A C N + ++PVSF+KFPL + W + +++ P+ + +CSE
Sbjct: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
Query: 57 HFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQL-PPPPLP--PPVSQVD 113
HFTP CF+ + L+ +AVP+IF P + Q+ + PPPPL P+ Q
Sbjct: 61 HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSP 120
Query: 114 AAIGLLMPPLQTPVNLSV 131
A P+ PV L V
Sbjct: 121 AI------PVSGPVRLVV 132
>gi|40068500 THAP domain containing, apoptosis associated protein
1 isoform 2 [Homo sapiens]
Length = 53
Score = 57.0 bits (136), Expect = 1e-08
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 1 MVQSCSAYGCKNRYDKDKPVSFHK 24
MVQSCSAYGCKNRYDKDKPVSFHK
Sbjct: 1 MVQSCSAYGCKNRYDKDKPVSFHK 24
>gi|21389507 THAP domain containing 6 [Homo sapiens]
Length = 222
Score = 56.2 bits (134), Expect = 2e-08
Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 1 MVQSCSAYGCKNRY---DKDKPVSFHKFPLTRPSLCKEWEAAVRRKN------FKPTKYS 51
MV+ CSA GC +R K K ++FH FP T ++ ++W A++R + ++P K
Sbjct: 1 MVKCCSAIGCASRCLPNSKLKGLTFHVFP-TDENIKRKWVLAMKRLDVNAAGIWEPKKGD 59
Query: 52 SICSEHFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQ 111
+CS HF F R N LK +P+IF K + L ++ + P +
Sbjct: 60 VLCSRHFKKTDFDRSAPNIKLKPGVIPSIFDSPYHLQGKREKLHCRKNFTLKTV--PATN 117
Query: 112 VDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCR 171
+ + ++ + +F +H+Y+V D+ +K H+L+ + +L ++ +
Sbjct: 118 YNHHLVGASSCIEEFQSQFIF-EHSYSVMDS--PKKLKHKLDHVIGELEDTKESLRNVLD 174
Query: 172 RQERQLEKLKEVVHFQKEKDDVSE 195
R++R + L++ + K++ +S+
Sbjct: 175 REKRFQKSLRKTIRELKDECLISQ 198
>gi|94536788 THAP domain containing 9 [Homo sapiens]
Length = 903
Score = 48.5 bits (114), Expect = 4e-06
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 36/176 (20%)
Query: 1 MVQSCSAYGCKNR---YDKDKPVSFHKFPLTRPSLCKEWEAAVRR------KNFKPTKYS 51
M +SCSA GC R +++ +SFH+FP K W AV R K + P +
Sbjct: 1 MTRSCSAVGCSTRDTVLSRERGLSFHQFPTDTIQRSK-WIRAVNRVDPRSKKIWIPGPGA 59
Query: 52 SICSEHFTPDCFKRECNNKLLKENAVPTIFLCTEP---HDKKEDLLEPQEQLPPPPLPPP 108
+CS+HF F+ + LK+ AVP++ L P H K + ++++ PLP
Sbjct: 60 ILCSKHFQESDFESYGIRRKLKKGAVPSVSLYKIPQGVHLKG----KARQKILKQPLPDN 115
Query: 109 VSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMH-QRKRIHQLEQQVEKLRKKL 163
+V DHNY+++ + +++ +++Q ++ +K+L
Sbjct: 116 SQEVATE------------------DHNYSLKTPLTIGAEKLAEVQQMLQVSKKRL 153
>gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens]
Length = 353
Score = 47.8 bits (112), Expect = 7e-06
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 VRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKE 91
++R ++ P+KY +CS+HFTPD + LK+ AVPTIF E + K+
Sbjct: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKD 52
>gi|171906567 peripheral benzodiazepine receptor-associated protein
1 isoform b [Homo sapiens]
Length = 1797
Score = 43.9 bits (102), Expect = 1e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 93 LLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQL 152
L +E LP PP PP + A G P D+ + + +R+ QL
Sbjct: 221 LRNQRETLPLPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQL 280
Query: 153 EQQVEKLRKKLKTAQQRCRRQERQLEKLK 181
E ++ K RKK ++ +Q R+++R+ E+L+
Sbjct: 281 ESELSKKRKKCESLEQEARKKQRRCEELE 309
>gi|171906559 peripheral benzodiazepine receptor-associated protein
1 isoform a [Homo sapiens]
Length = 1857
Score = 43.9 bits (102), Expect = 1e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 93 LLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQL 152
L +E LP PP PP + A G P D+ + + +R+ QL
Sbjct: 281 LRNQRETLPLPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQL 340
Query: 153 EQQVEKLRKKLKTAQQRCRRQERQLEKLK 181
E ++ K RKK ++ +Q R+++R+ E+L+
Sbjct: 341 ESELSKKRKKCESLEQEARKKQRRCEELE 369
>gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens]
Length = 309
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 MVQSCSAYGC---KNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKN------FKP-TKY 50
M + CSA GC R +++ +SFH+ P W A +R + + P ++Y
Sbjct: 1 MPRHCSAAGCCTRDTRETRNRGISFHRLPKKDNPRRGLWLANCQRLDPSGQGLWDPASEY 60
Query: 51 SSICSEHFTPDCFKRE--CNNKLLKENAVPTIF 81
CS+HF DCF+ LKE AVPTIF
Sbjct: 61 IYFCSKHFEEDCFELVGISGYHRLKEGAVPTIF 93
Score = 35.4 bits (80), Expect = 0.036
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 95 EPQEQLPPPPLPP-PVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLE 153
+P + P PL P PVS +A L +PP P + +H+Y V + ++R
Sbjct: 194 QPSPERQPSPLEPRPVSP--SAYMLRLPP---PAGAYIQNEHSYQVGSALLWKRRAEAAL 248
Query: 154 QQVEKLRKKLKTAQQRCRRQERQLEKLKE 182
++K +++L+ ++R +R +L KL++
Sbjct: 249 DALDKAQRQLQACKRREQRLRLRLTKLQQ 277
>gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens]
Length = 309
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 MVQSCSAYGC---KNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKN------FKP-TKY 50
M + CSA GC R +++ +SFH+ P W A +R + + P ++Y
Sbjct: 1 MPRHCSAAGCCTRDTRETRNRGISFHRLPKKDNPRRGLWLANCQRLDPSGQGLWDPASEY 60
Query: 51 SSICSEHFTPDCFKRE--CNNKLLKENAVPTIF 81
CS+HF DCF+ LKE AVPTIF
Sbjct: 61 IYFCSKHFEEDCFELVGISGYHRLKEGAVPTIF 93
Score = 35.4 bits (80), Expect = 0.036
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 95 EPQEQLPPPPLPP-PVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLE 153
+P + P PL P PVS +A L +PP P + +H+Y V + ++R
Sbjct: 194 QPSPERQPSPLEPRPVSP--SAYMLRLPP---PAGAYIQNEHSYQVGSALLWKRRAEAAL 248
Query: 154 QQVEKLRKKLKTAQQRCRRQERQLEKLKE 182
++K +++L+ ++R +R +L KL++
Sbjct: 249 DALDKAQRQLQACKRREQRLRLRLTKLQQ 277
>gi|19923268 protein-kinase, interferon-inducible double stranded
RNA dependent inhibitor, repressor of (P58 repressor)
[Homo sapiens]
Length = 761
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 1 MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKP------TKYSSIC 54
M C+A C R ++F +FP P+ C++W RR + + K+ +C
Sbjct: 1 MPNFCAAPNC-TRKSTQSDLAFFRFPRD-PARCQKWVENCRRADLEDKTPDQLNKHYRLC 58
Query: 55 SEHFTPDCFKRECNNK-LLKENAVPTIFLCT----EPHDK 89
++HF R + +L++NA+PTIF T PH +
Sbjct: 59 AKHFETSMICRTSPYRTVLRDNAIPTIFDLTSHLNNPHSR 98
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/46 (36%), Positives = 34/46 (73%)
Query: 145 QRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
+R R ++ QQVEK+R+K KT +++ + QE ++++ +E++ Q+EK
Sbjct: 95 ERMREQKMWQQVEKMREKKKTQEEKMQEQEEKMQEQEEMMWEQEEK 140
Score = 29.6 bits (65), Expect = 2.0
Identities = 14/53 (26%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQE--RQLEKLKEVVHFQKEK 190
E+ M +++R+ + ++++ + ++L+ ++R R Q+ +Q+EK++E Q+EK
Sbjct: 67 EEKMWEQQRLPEQKEKMWEQDERLREKEERMREQKMWQQVEKMREKKKTQEEK 119
Score = 27.3 bits (59), Expect = 9.9
Identities = 10/38 (26%), Positives = 25/38 (65%)
Query: 153 EQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+++ + KK++ ++ R QE ++++ +E + Q+EK
Sbjct: 4 EERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEK 41
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 70 KLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQ---TP 126
K+L E++ + +P K L + PPPP PPP PL+ T
Sbjct: 430 KVLPEDSAQALEKLLQPF-KSTSLRQAAPPPPPPPPPPPPPPTAGGADSKNFPLRAQVTE 488
Query: 127 VNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHF 186
+ S + + ++ + + E++ + RKKL+ A ++ +QE +L++L +
Sbjct: 489 ASSSASSTSSSSADEEFDPQLSLQLKEKKTLRRRKKLEKAMKQLVKQE-ELKRLYKAQAI 547
Query: 187 QKEKDDVSER 196
Q++ ++V ER
Sbjct: 548 QRQLEEVEER 557
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 38.9 bits (89), Expect = 0.003
Identities = 20/78 (25%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 130 SVFCDHNYTVEDTMH-----------QRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLE 178
+V C+ + + T H +R+++ +LEQQ E+ +++ K A++R R +ER+ +
Sbjct: 248 AVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQK 307
Query: 179 KLKEVVHFQKEKDDVSER 196
+L+E+ +K ++ + +R
Sbjct: 308 ELEELERERKREEKLRKR 325
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 37.0 bits (84), Expect = 0.012
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 100 LPPPPLPPPVSQVDAAIGLLMP-PLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEK 158
LPPPP PPPV G+ M PL P + + + V +++ HQ + EK
Sbjct: 1363 LPPPPPPPPVHYAGDFDGMSMDLPLPPPPSANQIGLPSAQVAAAERRKREEHQRWYEKEK 1422
Query: 159 LRKKLKTAQQRCRRQERQLEKLK 181
R + + ++R R QER+L +++
Sbjct: 1423 ARLEEERERKR-REQERKLGQMR 1444
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 37.0 bits (84), Expect = 0.012
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 100 LPPPPLPPPVSQVDAAIGLLMP-PLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEK 158
LPPPP PPPV G+ M PL P + + + V +++ HQ + EK
Sbjct: 1364 LPPPPPPPPVHYAGDFDGMSMDLPLPPPPSANQIGLPSAQVAAAERRKREEHQRWYEKEK 1423
Query: 159 LRKKLKTAQQRCRRQERQLEKLK 181
R + + ++R R QER+L +++
Sbjct: 1424 ARLEEERERKR-REQERKLGQMR 1445
>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 3 [Homo
sapiens]
Length = 1612
Score = 37.0 bits (84), Expect = 0.012
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 100 LPPPPLPPPVSQVDAAIGLLMP-PLQTPVNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEK 158
LPPPP PPPV G+ M PL P + + + V +++ HQ + EK
Sbjct: 1348 LPPPPPPPPVHYAGDFDGMSMDLPLPPPPSANQIGLPSAQVAAAERRKREEHQRWYEKEK 1407
Query: 159 LRKKLKTAQQRCRRQERQLEKLK 181
R + + ++R R QER+L +++
Sbjct: 1408 ARLEEERERKR-REQERKLGQMR 1429
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 35.8 bits (81), Expect = 0.028
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 97 QEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVF---CDHNYTVEDTMHQRKRIHQLE 153
Q+QL PPPL P + + + L+ L + L + +E QR+ +L+
Sbjct: 304 QQQLQPPPLEPEEEE-EVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQ 362
Query: 154 QQVEKLRKKLKTAQQRCRRQERQLE 178
+++++L ++L+ QQ+ +QE QLE
Sbjct: 363 EELQQLEQQLEQQQQQLEQQEVQLE 387
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 35.4 bits (80), Expect = 0.036
Identities = 15/57 (26%), Positives = 35/57 (61%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEKDDVSER 196
E Q +++ + E+QV+K ++++ +++ R QE Q+ + +E + QKE+ + E+
Sbjct: 234 EQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQ 290
Score = 34.7 bits (78), Expect = 0.062
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+QV K ++++ +++ R+QE Q+ K +E + QKE+
Sbjct: 352 EQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQ 402
Score = 34.3 bits (77), Expect = 0.081
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q+ K ++++ +++ R+QE Q+ + KE + QKE+
Sbjct: 359 EQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQ 409
Score = 33.1 bits (74), Expect = 0.18
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E T Q +++ + E+Q+ + ++++ +++ R QE Q+ K +E + QKE+
Sbjct: 289 EQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQ 339
Score = 33.1 bits (74), Expect = 0.18
Identities = 13/51 (25%), Positives = 33/51 (64%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q++K ++++ +++ R+QE Q+ K +E + Q+E+
Sbjct: 345 EQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQ 395
Score = 32.3 bits (72), Expect = 0.31
Identities = 13/51 (25%), Positives = 33/51 (64%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+QV+K ++++ +++ R+QE Q+ + +E + Q+E+
Sbjct: 227 EQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQ 277
Score = 30.8 bits (68), Expect = 0.89
Identities = 12/51 (23%), Positives = 33/51 (64%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q++++ + E+Q+ + ++++ +++ R+QE Q+ K +E + Q+E+
Sbjct: 338 EQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQ 388
Score = 30.4 bits (67), Expect = 1.2
Identities = 12/51 (23%), Positives = 32/51 (62%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q+ K +++ +++ ++QE Q++K +E + Q+E+
Sbjct: 213 EQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQ 263
Score = 30.0 bits (66), Expect = 1.5
Identities = 12/46 (26%), Positives = 31/46 (67%)
Query: 145 QRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
Q +++ + E+Q++K +++ +++ R+QE Q+ + +E V Q+E+
Sbjct: 204 QEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQ 249
Score = 29.3 bits (64), Expect = 2.6
Identities = 12/51 (23%), Positives = 31/51 (60%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q+ + ++++ +++ +QE Q+ + KE + QKE+
Sbjct: 296 EQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQ 346
Score = 28.5 bits (62), Expect = 4.4
Identities = 12/51 (23%), Positives = 31/51 (60%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q+ + ++++ +++ QE Q++K +E V Q+E+
Sbjct: 206 EQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQ 256
Score = 28.5 bits (62), Expect = 4.4
Identities = 12/51 (23%), Positives = 31/51 (60%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+ M ++K + E+Q + ++++ +++ R QE Q+ + +E + Q+E+
Sbjct: 275 EEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQ 325
Score = 28.1 bits (61), Expect = 5.8
Identities = 11/51 (21%), Positives = 32/51 (62%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q+ + ++++ +++ ++QE Q+ K +E + Q+E+
Sbjct: 220 EQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQ 270
Score = 27.7 bits (60), Expect = 7.6
Identities = 11/51 (21%), Positives = 32/51 (62%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q++++ + ++Q+ K +++ +++ ++QE Q+ K +E + Q+E+
Sbjct: 331 EQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQ 381
Score = 27.7 bits (60), Expect = 7.6
Identities = 11/51 (21%), Positives = 30/51 (58%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+Q+ K ++++ +++ Q+ Q+ + KE + Q+E+
Sbjct: 366 EQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQ 416
Score = 27.7 bits (60), Expect = 7.6
Identities = 12/50 (24%), Positives = 30/50 (60%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKE 189
E Q +++ + E+Q+ + ++++ +++ R QE Q+ + KE + Q+E
Sbjct: 380 EQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEE 429
>gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 479
Score = 35.4 bits (80), Expect = 0.036
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 140 EDTMH-QRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+ +H Q +R+H+ E+++ + ++L ++R R QE +L + +E +H Q+E+
Sbjct: 205 EERLHEQEERLHEQEERLCEQEERLCEQEERLREQEERLREQEERLHEQEER 256
Score = 28.5 bits (62), Expect = 4.4
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
++T H RK + + +Q++ + + RRQE +L + +E +H Q+E+
Sbjct: 164 DETNHLRKELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLHEQEER 214
Score = 27.3 bits (59), Expect = 9.9
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQER---------QLEKLKEVVHFQKEK 190
E Q +R+H+ E+++ + ++L ++R QE+ ++EKL E Q+E+
Sbjct: 241 ERLREQEERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQERRQEEQ 300
Query: 191 DDVSER 196
+ + ER
Sbjct: 301 ERLLER 306
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 34.7 bits (78), Expect = 0.062
Identities = 13/51 (25%), Positives = 33/51 (64%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+ Q++++H+ E+++ K +K+ +++ R QE ++ + +E + Q+EK
Sbjct: 489 EEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEEK 539
Score = 32.0 bits (71), Expect = 0.40
Identities = 11/51 (21%), Positives = 34/51 (66%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+ +H+++ I + ++++ + +K++ +++ RQE ++ + +E + Q+EK
Sbjct: 482 EEKIHEQEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEK 532
Score = 30.4 bits (67), Expect = 1.2
Identities = 12/51 (23%), Positives = 30/51 (58%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q + + + E+++ + KK++ +++ R QE +++ +E + Q+EK
Sbjct: 661 EKMQEQEETMWRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEK 711
Score = 29.3 bits (64), Expect = 2.6
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Query: 139 VEDTMHQRKRIHQLE---QQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
+E+ MH++++I + E Q+ EK+R+ Q++ + QE ++ + +E + Q+EK
Sbjct: 396 LEEKMHEQEKIREQEEKRQEEEKIRE-----QEKRQEQEAKMWRQEEKIREQEEK 445
Score = 28.5 bits (62), Expect = 4.4
Identities = 11/50 (22%), Positives = 29/50 (58%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKE 189
E ++I + E+++ + +K++ +++ RRQE + + +E + Q+E
Sbjct: 307 EKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEE 356
Score = 27.7 bits (60), Expect = 7.6
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRK------KLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+ MH++++I + E++ E+ K K++ +++ RQE ++ + +E Q+EK
Sbjct: 550 EEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEKIREQEEKRQEQEEK 606
Score = 27.3 bits (59), Expect = 9.9
Identities = 10/51 (19%), Positives = 30/51 (58%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++ + E+++ + +K + +++ +QE ++ + +E + Q+EK
Sbjct: 577 EKIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEK 627
>gi|239745496 PREDICTED: hypothetical protein XP_002343477 [Homo
sapiens]
Length = 218
Score = 34.7 bits (78), Expect = 0.062
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 90 KEDLLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRI 149
KE L P LPP PLPP V L PPL T + +R R+
Sbjct: 109 KECLFVP---LPPSPLPPSVDD-----NLKTPPLAT--------QEAEAEKPPKPKRWRV 152
Query: 150 HQLEQQVEKLRKKLKTAQQRCRRQERQLEKLK 181
++EQ + R++ AQQ + + R+L KL+
Sbjct: 153 DEVEQSPKPKRQREAEAQQLPKPKRRRLSKLR 184
>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 34.7 bits (78), Expect = 0.062
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 90 KEDLLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRI 149
KE L P LPP PLPP V L PPL T + +R R+
Sbjct: 360 KECLFVP---LPPSPLPPSVDD-----NLKTPPLAT--------QEAEVEKPPKPKRWRV 403
Query: 150 HQLEQQVEKLRKKLKTAQQRCRRQERQLEKLK 181
++EQ + R++ AQQ + + R+L KL+
Sbjct: 404 DEVEQSPKPKRQREAEAQQLPKPKRRRLSKLR 435
>gi|239745475 PREDICTED: similar to NPIP-like protein
ENSP00000283050 isoform 1 [Homo sapiens]
Length = 385
Score = 34.7 bits (78), Expect = 0.062
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 90 KEDLLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRI 149
KE L P LPP PLPP V L PPL T + +R R+
Sbjct: 296 KECLFVP---LPPSPLPPSVDD-----NLKTPPLAT--------QEAEVEKPPKPKRWRV 339
Query: 150 HQLEQQVEKLRKKLKTAQQRCRRQERQLEKLK 181
++EQ + R++ AQQ + + R+L KL+
Sbjct: 340 DEVEQSPKPKRQREAEAQQLPKPKRRRLSKLR 371
>gi|239745469 PREDICTED: nuclear pore complex interacting
protein-like 1 [Homo sapiens]
Length = 371
Score = 34.7 bits (78), Expect = 0.062
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 90 KEDLLEPQEQLPPPPLPPPVSQVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDTMHQRKRI 149
KE L P LPP PLPP V L PPL T + +R R+
Sbjct: 282 KECLFVP---LPPSPLPPSVDD-----NLKTPPLAT--------QEAEVEKPPKPKRWRV 325
Query: 150 HQLEQQVEKLRKKLKTAQQRCRRQERQLEKLK 181
++EQ + R++ AQQ + + R+L KL+
Sbjct: 326 DEVEQSPKPKRQREAEAQQLPKPKRRRLSKLR 357
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 34.7 bits (78), Expect = 0.062
Identities = 12/51 (23%), Positives = 33/51 (64%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E+ Q ++I +LE+ ++ +KL+ +++ + +E ++++ +E + Q+EK
Sbjct: 427 EEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEK 477
Score = 30.8 bits (68), Expect = 0.89
Identities = 12/51 (23%), Positives = 30/51 (58%)
Query: 140 EDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q +++H+ E+++ + K+ +++ R QE ++ + +E + Q+EK
Sbjct: 325 EKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEK 375
Score = 29.3 bits (64), Expect = 2.6
Identities = 14/49 (28%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 145 QRKRIHQLEQQVEKLRK---KLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
+ KR ++ +Q +K+R+ K++ ++ RQE ++ +L+E++ Q+EK
Sbjct: 401 EEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEK 449
Score = 28.5 bits (62), Expect = 4.4
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 140 EDTMH-QRKRIHQLEQQVEKLRKKLKTAQQRCRRQE----RQLEKLKE 182
E+ MH Q ++I + E ++ + +K++ +++ R QE RQ EK++E
Sbjct: 331 EEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIRE 378
Score = 27.7 bits (60), Expect = 7.6
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 140 EDTMHQRKRIHQLEQQV----EKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
E Q ++I + E+++ EK+R++ + Q++ RQE+++ + E + Q+E+
Sbjct: 374 EKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEE 428
Score = 27.3 bits (59), Expect = 9.9
Identities = 10/46 (21%), Positives = 29/46 (63%)
Query: 145 QRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEK 190
Q +++ + E+++ + +K++ + + RQE ++ + +E + Q+EK
Sbjct: 323 QEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEK 368
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,438,843
Number of Sequences: 37866
Number of extensions: 562108
Number of successful extensions: 8953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 6851
Number of HSP's gapped (non-prelim): 2162
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.