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Search of human proteins with 8922297
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922297 LUC7-like isoform a [Homo sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41393554 LUC7-like isoform b [Homo sapiens] 639 0.0
gi|8922297 LUC7-like isoform a [Homo sapiens] 639 0.0
gi|116812577 LUC7-like 2 [Homo sapiens] 523 e-148
gi|52426743 cisplatin resistance-associated overexpressed protei... 204 9e-53
gi|19923485 cisplatin resistance-associated overexpressed protei... 204 9e-53
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 83 4e-16
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 83 4e-16
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 75 6e-14
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 70 3e-12
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 70 3e-12
gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens] 69 7e-12
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 66 5e-11
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 66 5e-11
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 65 1e-10
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 65 1e-10
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 65 1e-10
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 65 1e-10
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 64 2e-10
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 64 2e-10
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 63 4e-10
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 63 4e-10
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 62 5e-10
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ... 62 7e-10
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c... 62 7e-10
gi|148746195 trichohyalin [Homo sapiens] 62 9e-10
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 62 9e-10
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 61 1e-09
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 61 1e-09
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 61 2e-09
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 60 2e-09
>gi|41393554 LUC7-like isoform b [Homo sapiens]
Length = 371
Score = 639 bits (1647), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT
Sbjct: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
Query: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS
Sbjct: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
Query: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS
Sbjct: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
Query: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN
Sbjct: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
Query: 241 QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR 300
QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR
Sbjct: 241 QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR 300
Query: 301 RHRSRSRSHSRGHRRASRDRSAKYK 325
RHRSRSRSHSRGHRRASRDRSAKYK
Sbjct: 301 RHRSRSRSHSRGHRRASRDRSAKYK 325
>gi|8922297 LUC7-like isoform a [Homo sapiens]
Length = 325
Score = 639 bits (1647), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT
Sbjct: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
Query: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS
Sbjct: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
Query: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS
Sbjct: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
Query: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN
Sbjct: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
Query: 241 QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR 300
QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR
Sbjct: 241 QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR 300
Query: 301 RHRSRSRSHSRGHRRASRDRSAKYK 325
RHRSRSRSHSRGHRRASRDRSAKYK
Sbjct: 301 RHRSRSRSHSRGHRRASRDRSAKYK 325
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 523 bits (1346), Expect = e-148
Identities = 262/327 (80%), Positives = 300/327 (91%), Gaps = 6/327 (1%)
Query: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
MSAQAQMRA+LDQLMGT+RDGD TRQR+KF+DDRVCKSHLL+CCPHD+L+GTRMDLGEC
Sbjct: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECL 60
Query: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
K+HDLALRADYEIASKE+D FFELDAMDHL+SFIA+CDRRTE+AKKRLAETQEEISAEV+
Sbjct: 61 KVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVA 120
Query: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
AKAE+VHELNEEIGKLLAK EQLGAEGNV+ESQK++ EVEK RAKK+EAEE YRNSMPAS
Sbjct: 121 AKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPAS 180
Query: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI+IREKL++L++ VAEKQEKRN
Sbjct: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRN 240
Query: 241 QDRLRRREEREREERLS-RRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRH 299
Q+RL+RREEREREER RRS S +++ +RSRSR+ RR RSRS SRER++ +RS+SR++
Sbjct: 241 QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR 300
Query: 300 RRHRSR--SRSHSRGHRR---ASRDRS 321
RHRSR SRS SR H+R +SRDRS
Sbjct: 301 HRHRSRSSSRSRSRSHQRSRHSSRDRS 327
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 204 bits (519), Expect = 9e-53
Identities = 118/326 (36%), Positives = 191/326 (58%), Gaps = 13/326 (3%)
Query: 10 LLDQLMGTARD--GDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLAL 67
LLD+LMG R+ DE R V++ + VCK +L CP ++ TR DLG C KIHD L
Sbjct: 7 LLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENL 66
Query: 68 RADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKA---- 123
R YE +S+ + +E D + +L+S +AE +RR RLA +Q + S+ +
Sbjct: 67 RKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNE 126
Query: 124 EKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQ 183
EK+ L ++I LL + E+LG+EG V+E+Q ++ VE+++ +++E +++ + + Q
Sbjct: 127 EKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK-EERELLRSTTSTIESFAAQ 185
Query: 184 QQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDR 243
++++ VCEVC A+L + D R+ DH GK H+G+ +I+ +++L++ + ++ E+ ++D
Sbjct: 186 EKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDE 245
Query: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR--- 300
++E++EREER R R R+ R + R + R+ RERRK SRSRSR R
Sbjct: 246 RLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSD 305
Query: 301 RHRSRSRSHSRG---HRRASRDRSAK 323
R SRSR H R RR SR R +
Sbjct: 306 RRCSRSRDHKRSRSRERRRSRSRDRR 331
Score = 62.0 bits (149), Expect = 7e-10
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNS 176
A++ A E++ E KL + E+ + + + ++ E EK R +++E E E +
Sbjct: 221 AKIKATVEELKE------KLRKRTEEPDRDERLKKEKQEREEREKERERERE-ERERKRR 273
Query: 177 MPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQ 236
++++ R E + R +D + D R E++
Sbjct: 274 REEEEREKERARDRERRKRSRSRSRHSSRTSDR----------RCSRSRDHKRSRSRERR 323
Query: 237 EKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSR 296
R++DR RR +R ER R SR+RDRRRS+SRDR+ + RS SR+R + +S+ +
Sbjct: 324 RSRSRDR-RRSRSHDRSERKHR---SRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEK 379
Query: 297 DRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
++ +S S + S D + + K
Sbjct: 380 EKRGSDDKKSSVKSGSREKQSEDTNTESK 408
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 204 bits (519), Expect = 9e-53
Identities = 118/326 (36%), Positives = 191/326 (58%), Gaps = 13/326 (3%)
Query: 10 LLDQLMGTARD--GDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLAL 67
LLD+LMG R+ DE R V++ + VCK +L CP ++ TR DLG C KIHD L
Sbjct: 7 LLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENL 66
Query: 68 RADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKA---- 123
R YE +S+ + +E D + +L+S +AE +RR RLA +Q + S+ +
Sbjct: 67 RKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNE 126
Query: 124 EKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQ 183
EK+ L ++I LL + E+LG+EG V+E+Q ++ VE+++ +++E +++ + + Q
Sbjct: 127 EKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK-EERELLRSTTSTIESFAAQ 185
Query: 184 QQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDR 243
++++ VCEVC A+L + D R+ DH GK H+G+ +I+ +++L++ + ++ E+ ++D
Sbjct: 186 EKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDE 245
Query: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR--- 300
++E++EREER R R R+ R + R + R+ RERRK SRSRSR R
Sbjct: 246 RLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSD 305
Query: 301 RHRSRSRSHSRG---HRRASRDRSAK 323
R SRSR H R RR SR R +
Sbjct: 306 RRCSRSRDHKRSRSRERRRSRSRDRR 331
Score = 62.0 bits (149), Expect = 7e-10
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNS 176
A++ A E++ E KL + E+ + + + ++ E EK R +++E E E +
Sbjct: 221 AKIKATVEELKE------KLRKRTEEPDRDERLKKEKQEREEREKERERERE-ERERKRR 273
Query: 177 MPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQ 236
++++ R E + R +D + D R E++
Sbjct: 274 REEEEREKERARDRERRKRSRSRSRHSSRTSDR----------RCSRSRDHKRSRSRERR 323
Query: 237 EKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSR 296
R++DR RR +R ER R SR+RDRRRS+SRDR+ + RS SR+R + +S+ +
Sbjct: 324 RSRSRDR-RRSRSHDRSERKHR---SRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEK 379
Query: 297 DRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
++ +S S + S D + + K
Sbjct: 380 EKRGSDDKKSSVKSGSREKQSEDTNTESK 408
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 82.8 bits (203), Expect = 4e-16
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
RE+L+ E + KR + + R R RR SR+R+R++SRSR R R++SR
Sbjct: 40 RERLNSSEN--GEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSR 97
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
S SRER+K SRSRSR+R RR RSRSRS SR HR +R RS
Sbjct: 98 SRSRERKK-SRSRSRERKRRIRSRSRSRSR-HRHRTRSRS 135
Score = 80.9 bits (198), Expect = 1e-15
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
RK+ + R++ R RR R RE + SR SR+R+R++SRSR R R++SRS SRER+
Sbjct: 58 RKSSRGRSHSRSRSRERRHRSRSRERKKSR---SRSRERKKSRSRSRERKKSRSRSRERK 114
Query: 289 KLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRSAK 323
+ RSRSR R R RHR+RSRS +R R + R K
Sbjct: 115 RRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEK 150
Score = 62.0 bits (149), Expect = 7e-10
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
E + ++RL E E + R SR R RSRSR+RR R S SRER+K SRS
Sbjct: 33 EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHR---SRSRERKK-SRS 88
Query: 294 RSRDRHR-----RHRSRSRSHSRGHRRASRDRS 321
RSR+R + R R +SRS SR +R R RS
Sbjct: 89 RSRERKKSRSRSRERKKSRSRSRERKRRIRSRS 121
Score = 58.9 bits (141), Expect = 6e-09
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRK 289
K + K+ K + + + ERL+ R +R+ R R R SRS SRERR
Sbjct: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH 76
Query: 290 LSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAKYK 325
SRSR R + R R R +SRS SR R+ SR RS + K
Sbjct: 77 RSRSRERKKSRSRSRERKKSRSRSR-ERKKSRSRSRERK 114
Score = 55.8 bits (133), Expect = 5e-08
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 161 KVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQ 220
K ++ KK EE+ + +S +++L S+ G + R+ G+ H +
Sbjct: 17 KDKSSKKHKSEEHNDKEHSSDKGRERLN-----SSENGEDRHKRKERKSSRGRSHS---R 68
Query: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR-----RSRSRDR 275
R + + R E+++ R++ R R++ ER RS SR R RR RSRSR R
Sbjct: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
Query: 276 RRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHS 310
R RSRS +R R + + R R RS SR+ S
Sbjct: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPS 163
Score = 52.8 bits (125), Expect = 4e-07
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 235 KQEKRNQDRLRRREEREREERLSRR-SGSRTRDRRRS--RSRDRRRRRSRSTSRERRKLS 291
KQ +R++ + + ++ + EE + S + R+R S DR +R+ R +SR R S
Sbjct: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR---S 65
Query: 292 RSRSRDRHRRHRSRSRSHSRG-----HRRASRDRSAKYK 325
SRSR R RRHRSRSR + R+ SR RS + K
Sbjct: 66 HSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERK 104
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 82.8 bits (203), Expect = 4e-16
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
RE+L+ E + KR + + R R RR SR+R+R++SRSR R R++SR
Sbjct: 99 RERLNSSEN--GEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSR 156
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
S SRER+K SRSRSR+R RR RSRSRS SR HR +R RS
Sbjct: 157 SRSRERKK-SRSRSRERKRRIRSRSRSRSR-HRHRTRSRS 194
Score = 80.9 bits (198), Expect = 1e-15
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
RK+ + R++ R RR R RE + SR SR+R+R++SRSR R R++SRS SRER+
Sbjct: 117 RKSSRGRSHSRSRSRERRHRSRSRERKKSR---SRSRERKKSRSRSRERKKSRSRSRERK 173
Query: 289 KLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRSAK 323
+ RSRSR R R RHR+RSRS +R R + R K
Sbjct: 174 RRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEK 209
Score = 62.0 bits (149), Expect = 7e-10
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 112 QEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME----VEKVRAKKK 167
+E+ VS +A K H + + + + EG S+ E K ++ KK
Sbjct: 24 KEQSEVSVSPRASK-HHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKK 82
Query: 168 EAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQ 227
EE+ + +S +++L S+ G + R+ G+ H
Sbjct: 83 HKSEEHNDKEHSSDKGRERLN-----SSENGEDRHKRKERKSSRGRSH------------ 125
Query: 228 LRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRR-----SRS 282
+ + +E+R++ R R R++ R ++S SR+R+R++SRSR R R+R SRS
Sbjct: 126 ---SRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 182
Query: 283 TSRER-RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
SR R R SRSR+R R R + R R R SR S
Sbjct: 183 RSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPS 222
Score = 60.5 bits (145), Expect = 2e-09
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 204 RRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR 263
+R +D+ G K H + +E K + K+ K + + + ERL+
Sbjct: 51 KRKSDNEGRK-HRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGE 109
Query: 264 TRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR---RHRSRSRSHSRGHRRASRDR 320
R +R+ R R R SRS SRERR SRSR R + R R R +SRS SR R+ SR R
Sbjct: 110 DRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSR-ERKKSRSR 168
Query: 321 SAKYK 325
S + K
Sbjct: 169 SRERK 173
Score = 51.2 bits (121), Expect = 1e-06
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 223 EKLDQLRKTVAEKQEK----RNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR 278
+K +Q +V+ + K R++ R R R+ + E RS SR+++ RR S+D+ +
Sbjct: 22 KKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSK 81
Query: 279 RSRSTSRERRKLSRSRSR----------DRHRRHR---SRSRSHSRGHRRASRDRS 321
+ +S ++ S + R DRH+R SR RSHSR R R RS
Sbjct: 82 KHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRS 137
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 237 EKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR--------RSRSTSRE-R 287
EK + DR +++E+ E +S R+ R RSRSR+R+R+ RSRS S+E R
Sbjct: 14 EKTSPDRDKKKEQSEVS--VSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGR 71
Query: 288 RKLSRSRSRDRHR--RHRSRSRSHSRGHRRASRDRSAK 323
R S+ +S +H+ H + S +G R + + +
Sbjct: 72 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGE 109
Score = 28.5 bits (62), Expect = 8.5
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 266 DRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSR-------GHRRASR 318
D R + R +E+ ++S S +H RSRSRS R G + SR
Sbjct: 5 DTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSR 64
Query: 319 DRS 321
RS
Sbjct: 65 SRS 67
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 75.5 bits (184), Expect = 6e-14
Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
RK A + ++ R R ++ + RRS SR RDRRR RSR R +RRSRS R+R
Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRL 68
Query: 289 KLSRSRSRDR---HRRHRSRSRSHSRGHRRASRDRSA 322
+ SRSR RDR RR RSR R SR R R RS+
Sbjct: 69 RRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSS 105
Score = 74.3 bits (181), Expect = 1e-13
Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRR-RRSRSTSRER- 287
++ ++K+ KR DR R +R+R RR SR+RD+RRSRSRDR+R RRSRS R+R
Sbjct: 25 RSPSDKRSKRGDDRRSRSRDRDR-----RRERSRSRDKRRSRSRDRKRLRRSRSRERDRS 79
Query: 288 RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R+ RSRSRD R RSRSRS R R +S +K
Sbjct: 80 RERRRSRSRD---RRRSRSRSRGRRSRSSSPGNKSK 112
Score = 67.0 bits (162), Expect = 2e-11
Identities = 47/89 (52%), Positives = 54/89 (60%), Gaps = 16/89 (17%)
Query: 247 REEREREERLSRR--SGSRTRDR------------RRSRSRDRRRRRSRSTSRERRKLSR 292
RE R +R + R SGSR+R R RRSRSRDR RRR RS SR++R+ SR
Sbjct: 3 RESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRR-SR 61
Query: 293 SRSRDRHRRHRSRSRSHSRGHRRA-SRDR 320
SR R R RR RSR R SR RR+ SRDR
Sbjct: 62 SRDRKRLRRSRSRERDRSRERRRSRSRDR 90
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSR-RSGSRTRDRRRSRSRDRRRRRSRSTSRER 287
R +K+ R++DR R R R RE SR R SR+RDRRRSRSR R RR S+ +
Sbjct: 51 RSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNK 110
Query: 288 RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
K + +RSR + + S + + D K
Sbjct: 111 SKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEK 146
Score = 53.1 bits (126), Expect = 3e-07
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 229 RKTVAEKQEKRNQDRLRRREE-REREERLSRRSG------SRTRDRRRS----RSRDRRR 277
R + + R++DR RRRE R R++R SR SR+R+R RS RSR R R
Sbjct: 31 RSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDR 90
Query: 278 RRSRSTSRERRKLSRS-RSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
RRSRS SR RR S S ++ + +RSRS+ + G + + K
Sbjct: 91 RRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDK 137
Score = 32.0 bits (71), Expect = 0.77
Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRD--------RRRSRSRDRRR 277
D+ R + +E+ RR R+R SR G R+R + +RSR + +
Sbjct: 64 DRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEK 123
Query: 278 RRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
+S+E++K + ++ + + ++ R ++R K++
Sbjct: 124 TDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWR 171
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 69.7 bits (169), Expect = 3e-12
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 239 RNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDR 298
R++DR R RE RER R + R+RRRSRSRD RRRRSRS +E R+ SR RS+D
Sbjct: 231 RDRDRDRERERRERS-----RERDKERERRRSRSRD-RRRRSRSRDKEERRRSRERSKD- 283
Query: 299 HRRHRSRSRSHSRGHRRASRDRSAK 323
+ R R R SR RA R+R K
Sbjct: 284 --KDRDRKRRSSRSRERARRERERK 306
Score = 61.6 bits (148), Expect = 9e-10
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 241 QDRLRRREEREREERLSRRSGSRTRDRRR---SRSRDRRRRRSRSTSRERRKLSRSRSRD 297
+D R +ER L R R R+R R SR RD+ R R RS SR+RR+ SRSR ++
Sbjct: 213 RDDTSRYDERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKE 272
Query: 298 RHRRHRSRSRSHSRGH-RRASRDR 320
RR R RS+ R RR+SR R
Sbjct: 273 ERRRSRERSKDKDRDRKRRSSRSR 296
Score = 57.4 bits (137), Expect = 2e-08
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
RE+ ++ R+ E++ +R++ R RRR R R++ RRS R+R + + RDR+RR SR
Sbjct: 239 RERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRS----RERSKDKDRDRKRRSSR 294
Query: 282 STSRERRKLSR-----------------------------------------SRSRDRHR 300
S R RR+ R R RDR R
Sbjct: 295 SRERARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRER 354
Query: 301 RHRSRSRSHSRGHRRASRDRSAKYK 325
R RS R R RDR ++K
Sbjct: 355 RRSHRSERERRRDRDRDRDRDREHK 379
Score = 55.5 bits (132), Expect = 6e-08
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 246 RREEREREERLSRRSGSRT---RDRRRSRSRDRRRR-RSRSTSRERRKLSRSRSRDRHRR 301
R R+ R R G RDR R R R+RR R R R RERR RSRSRDR RR
Sbjct: 209 RHSGRDDTSRYDERPGPSPLPHRDRDRDRERERRERSRERDKERERR---RSRSRDRRRR 265
Query: 302 HRSRSRSHSRGHRRASRDRSAKYK 325
RSR + R R S+D+ K
Sbjct: 266 SRSRDKEERRRSRERSKDKDRDRK 289
Score = 50.8 bits (120), Expect = 2e-06
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 27/109 (24%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSG-------SRTRD-------------------R 267
++ KR R R R RERE + R G S D
Sbjct: 285 DRDRKRRSSRSRERARRERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPE 344
Query: 268 RRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRA 316
+ R RDR RRRS + RERR+ R R RDR R H+ R RG A
Sbjct: 345 EKGRDRDRERRRSHRSERERRR-DRDRDRDRDREHKRGERGSERGRDEA 392
Score = 45.8 bits (107), Expect = 5e-05
Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 246 RREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRR---- 301
RR + R S R + D R S R R R RERR+ SR R ++R RR
Sbjct: 200 RRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRS 259
Query: 302 --HRSRSRSHSRGHRRASRDRS 321
R RSRS + RR SR+RS
Sbjct: 260 RDRRRRSRSRDKEERRRSRERS 281
Score = 35.4 bits (80), Expect = 0.070
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 237 EKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSR 292
E++ +DR R R R ER R RDR R R RDR +R S R +R
Sbjct: 344 EEKGRDRDRERRRSHRSER------ERRRDRDRDRDRDREHKRGERGSERGRDEAR 393
Score = 33.9 bits (76), Expect = 0.20
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 249 EREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRS 308
+R+RE R S RS R+RRR R RDR R R +R + R RD R +
Sbjct: 349 DRDRERRRSHRS---ERERRRDRDRDRDRDR----EHKRGERGSERGRDEARGGGGGQDN 401
Query: 309 HSRGHRRASRD 319
G SRD
Sbjct: 402 GLEGLGNDSRD 412
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 69.7 bits (169), Expect = 3e-12
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 44/276 (15%)
Query: 70 DYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHEL 129
D++ SKERD+ + D ++ + KKR S E S E+ +
Sbjct: 428 DHKSNSKERDIRRNSEKDDKYKNKV----------KKRAKSKSRSKSKEKSKSKERDSKH 477
Query: 130 NEEIGKLLAKAEQLGAEGNVDESQKIL----MEVEKVRAKKKEAEEEYRNSMPASSFQQQ 185
N K + + NV E +K + E+ R+K+K + E +++ S ++
Sbjct: 478 NRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKE 537
Query: 186 KLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLR 245
K R + S R D GK H + RE+ ++ + ++DR R
Sbjct: 538 KDRRAQSRS----------RECDITKGK-HSYNSRTRERSRSRDRSRRVRSRTHDRDRSR 586
Query: 246 RRE-EREREERLSRRSGSRTRDRR----RSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR 300
+E R RE+ RR SR+R+RR RSRS+DRRRRR S S ER + S+SR++D++R
Sbjct: 587 SKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREE-SQSRNKDKYR 645
Query: 301 RHRSRSR-------------SHSRGHRRASRDRSAK 323
S+S S SR H ++ R K
Sbjct: 646 NQESKSSHRKENSESEKRMYSKSRDHNSSNNSREKK 681
Score = 60.5 bits (145), Expect = 2e-09
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 30/255 (11%)
Query: 94 IAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQ 153
I E R K+R +S + K EK ++ + K +K + D+
Sbjct: 391 IKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDH--KSNSKERDIRRNSEKDDKY 448
Query: 154 KILMEVE---KVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHD----NDRRL 206
K ++ K R+K KE + + +++++R + + + +D +
Sbjct: 449 KNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKG 508
Query: 207 ADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLR-------------RREERERE 253
D + Q+ K ++ + ++++++R Q R R R ER R
Sbjct: 509 KDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRS 568
Query: 254 ERLSRRSGSRTRDRRRSRSRD-------RRRRRSRSTSRERR-KLSRSRSRDRHRRHRSR 305
SRR SRT DR RSRS++ RRR RS SRERR RSRS+DR RR R
Sbjct: 569 RDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDS 628
Query: 306 SRSHSRGHRRASRDR 320
S + ++D+
Sbjct: 629 RSSEREESQSRNKDK 643
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 14/100 (14%)
Query: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR---------RSRSTSRE 286
+EKR + R + R+ +E+ ++S S+ +D+ RSRS+++ ++ S+S ++
Sbjct: 481 EEKRMRSRSKGRDHENVKEK-EKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKD 539
Query: 287 RRKLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRSAKYK 325
RR SRSR D + +H SR+ R SRDRS + +
Sbjct: 540 RRAQSRSRECDITKGKHSYNSRTRERSR---SRDRSRRVR 576
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 229 RKTVAEKQEKRNQDRLRRREER---EREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSR 285
RK EK+ K ++ + R+ R E++++ + R + + RS+S+++ + + R +
Sbjct: 418 RKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKH 477
Query: 286 ERRKLSRSRSRDRHRRHRS----RSRSHSRG---HRRASRDRS 321
R + R RSR + R H + +S S+G R S+++S
Sbjct: 478 NRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKS 520
Score = 42.7 bits (99), Expect = 4e-04
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 235 KQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR-RRRRSRS-----TSRERR 288
K++++ D + +ER R + S++ S++ + S+S+++ RR +SRS T +
Sbjct: 498 KEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHS 557
Query: 289 KLSRSRSR--DRHRRHRSRSRSHSRGHRRAS---RDRSAKYK 325
SR+R R R R R RSR+H R R+ R R +Y+
Sbjct: 558 YNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYR 599
Score = 37.0 bits (84), Expect = 0.024
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 228 LRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR----TRDRRRSRSRDRRRRR--SR 281
+RK+ + EK ++R R RE S R TR R+ + R RR R SR
Sbjct: 287 MRKSPPKADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSR 346
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
S SR+R + S + R R++ S G R D+S
Sbjct: 347 SRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKS 386
Score = 33.9 bits (76), Expect = 0.20
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 246 RREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSR 305
++EE++R + S S S + S S+ S S S + + +S+ R ++HR
Sbjct: 184 KKEEKKRHKSSSSSSSSSSDSDSSSDSQ------SSSDSSDSESATEEKSKKRKKKHRKN 237
Query: 306 SRSHSRGHRRASRDRSA 322
SR H + ++ + + +
Sbjct: 238 SRKHKKEKKKRKKSKKS 254
Score = 30.8 bits (68), Expect = 1.7
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 239 RNQDRLRR-------REEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLS 291
R++DR RR R+E +R +R+ SG R +S + + + + RK++
Sbjct: 348 RSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKIT 407
Query: 292 RSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R+ ++ + H+ S++R +
Sbjct: 408 DHRNVSESPNRKNEKEKKVKDHKSNSKERDIR 439
>gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens]
Length = 1220
Score = 68.6 bits (166), Expect = 7e-12
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRS 280
++ +D L++ A Q++ R E R+R ++ R SR+RDR R R RDR R R
Sbjct: 139 VKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKR---SRSRDRNRDRDRDRERNRD 195
Query: 281 RSTSRERRKLSRSRSRDRHR-----RHRSRSRSHSRGHRRASRDR 320
R R R SRSRSR R R R+RSRSRS S R RD+
Sbjct: 196 RDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK 240
Score = 48.5 bits (114), Expect = 8e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 223 EKLDQLRKTVAEKQEKRNQDRLRRRE-----EREREERLSRRSGSRTRDRRRSRSRDRRR 277
E D+ +K + RN+DR R RE + +R R RS SRTR+R + +SR R R
Sbjct: 166 EHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSR 225
Query: 278 RRSRSTSRERRKLSR------SRSRDRH 299
RS+S ++R+ + R RD+H
Sbjct: 226 SRSQSPPKDRKDRDKYGERNLDRWRDKH 253
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 65.9 bits (159), Expect = 5e-11
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 30/258 (11%)
Query: 52 TRMDLGECTKIHDLALRADY--EIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLA 109
T + + C+ I + + EI +ER++ + ES E + +KR
Sbjct: 15 TELQMVSCSHISKPCTQPGWQSEIREREREIETRKEGKKERES---ERKKERREREKRKR 71
Query: 110 ETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEA 169
E ++E E K +K EE + + E+ EG EK + KKKE
Sbjct: 72 EREKERKRERGKKEKKGERKKEERERKKRRREKENKEGE-----------EKEKRKKKEK 120
Query: 170 EEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLR 229
+E R S ++++ R E + +R+ + + + +E+ + R
Sbjct: 121 KERGRTSKEGKERERKEERKREERK------ERERKKEEREKER------ERKERKKRER 168
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRK 289
K V EK+E+R + + R++RER + R R R RR R ++R+++ R R++ +
Sbjct: 169 KQVGEKEEERKEKERKERKKRERNRK--ERKKERERKERRERKKERKKKEERKKERQKDR 226
Query: 290 LSRSRSRDRHRRHRSRSR 307
+ R ++R +R R +
Sbjct: 227 QTNWREKERGKRERKERK 244
Score = 55.1 bits (131), Expect = 8e-08
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
+EK + +K E++++R + + EE+E+ ++ ++ RT + R R R+R
Sbjct: 84 KEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREE 143
Query: 282 STSRERRKLSRSRSRDR-HRRHRSRSRSHSRGHRRASRDRSAKYK 325
RER+K R + R+R R+ R R + + R ++R + K
Sbjct: 144 RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKK 188
Score = 52.0 bits (123), Expect = 7e-07
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
+EK + K + K ++R R+EER+REER R R++ R R ++R R +
Sbjct: 112 KEKRKKKEKKERGRTSKEGKER-ERKEERKREERKERERKKEEREKERERKERKKRERKQ 170
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
+E + + R ++R +R R+R R+ R+R + K
Sbjct: 171 VGEKEEERKEKER-KERKKRERNRKERKKERERKERRERKKERK 213
Score = 50.1 bits (118), Expect = 3e-06
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREER-EREERLSRRSGSRTRDRRRSRSRDRRRRRS 280
+EK ++ R + K+ +R ++R +REER ERE + R R R R+ R R + +
Sbjct: 118 KEKKERGRTSKEGKERERKEER--KREERKERERKKEEREKERERKERKKRERKQVGEKE 175
Query: 281 RSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
+ RK + R R+R R + R R R ++ + + + K
Sbjct: 176 EERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKK 220
Score = 49.7 bits (117), Expect = 4e-06
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRR 279
+IRE+ R+ K+ K+ ++ R++E RERE+R R R R+R + + R++
Sbjct: 37 EIRERE---REIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKE 93
Query: 280 SRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRA-SRDRSAKYK 325
R + RR+ ++ +R + + R + R+R + K
Sbjct: 94 ERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERK 140
Score = 48.1 bits (113), Expect = 1e-05
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 199 LHDNDRRLADHFGGKLHLGFIQIREKLD-QLRKTVAEKQEKRNQDRLRRREEREREERLS 257
+ + +R + GK + +E+ + + RK EK+ KR + + ++ ER++EER
Sbjct: 38 IREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEER-E 96
Query: 258 RRSGSRTRDRRRSRSRDRRRRRSRS----TSRERRKLSRSRSRDRHRRHRSRSRSHSRGH 313
R+ R ++ + +++R+++ + TS+E ++ R R R R + R
Sbjct: 97 RKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREK 156
Query: 314 RRASRDRSAK 323
R ++R +
Sbjct: 157 ERERKERKKR 166
Score = 44.7 bits (104), Expect = 1e-04
Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
R+K ++ RK ++E + + +R+++E++ER + R+R+ R R+ R+ R R
Sbjct: 90 RKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERER 149
Query: 282 -----STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
RER++ + + + R + ++ R+R + K
Sbjct: 150 KKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKK 198
Score = 43.5 bits (101), Expect = 3e-04
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 235 KQEKRNQDRLRRR--EEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSR 292
K+E+R +++ +R +ER+RE + G R ++ R + R R + +E+RK
Sbjct: 60 KKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKE 119
Query: 293 SRSRDR-------------HRRHRSRSRSHSRGHRRASRDRSAKYK 325
+ R R +R + R + R R+R + K
Sbjct: 120 KKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKK 165
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 65.9 bits (159), Expect = 5e-11
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 10/234 (4%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKV--HELNEEIGKLLAKAEQLGAEGNVDESQKILM 157
R KK E EEI V + + L+ +++ EG+ S +
Sbjct: 236 RPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDREL 295
Query: 158 EVEKVRAK----KKEAEEEYRNSMPAS-SFQQQKLRVCEVCSAYLGLHDN--DRRLADHF 210
E EK R + KE E+E R S ++++ R E + D DRR D
Sbjct: 296 EREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRE 355
Query: 211 GGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREER-EREERLSRRSGSRTRDRRR 269
K + + D+ R EK+ +R+++R + + R E EE+ + R R
Sbjct: 356 REKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDD 415
Query: 270 SRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R + ++ SRS SRER+ SRSRSR+ +R RSRS+ S H+ S+++S K
Sbjct: 416 KRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNK 469
Score = 64.7 bits (156), Expect = 1e-10
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 35/264 (13%)
Query: 90 LESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNV 149
L SF+ + + + L + Q+ I ++ + K+ + +E AE++
Sbjct: 204 LRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKIKKDGKE------GAEEIDRHVER 257
Query: 150 DESQKILMEVEKVRA-KKKEAEEEYRNSMPASSFQQQKLRVCEV--CSAYLGLHDNDRRL 206
S+ + R+ ++ + +R +SSF ++ R E + +RR
Sbjct: 258 RRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRR 317
Query: 207 ADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSR-----RSG 261
+ L + RE+ ++ K ++R++DR R +E ER R R R
Sbjct: 318 SRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDR-EREKENERGRRRDRDYDKERGN 376
Query: 262 SRTRDRRRSRSR--------------------DRRRRRSRSTSRERRKLSRSRSRDRHRR 301
R ++R RSR R DRR R + S++ +K SRSRSR+R R
Sbjct: 377 EREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHR 436
Query: 302 HRSRSRSHSRGHRRASRDRSAKYK 325
RSRSR+ + R S+++S+K+K
Sbjct: 437 SRSRSRNAGKRSRSRSKEKSSKHK 460
Score = 56.6 bits (135), Expect = 3e-08
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDR---RRSRSRDRRRR 278
R D R + EK+ R++ R R+ R R +RS SR++++ ++ S+++ +
Sbjct: 410 RRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNK 469
Query: 279 RSRSTSRER-------RKLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRSAKY 324
RSRS S+ R +K S S+++ R R RS+ RSH R H S+D+S K+
Sbjct: 470 RSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDH-SDSKDQSDKH 522
Score = 55.1 bits (131), Expect = 8e-08
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
R K + R V EK+ K ++D R R+++ R + + RSRSR+ R+ RSR
Sbjct: 388 RSKEQRSRGEVEEKKHKEDKDDRRHRDDK--------RDSKKEKKHSRSRSRE-RKHRSR 438
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRA 316
S SR K SRSRS+++ +H++ S+ S R+
Sbjct: 439 SRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRS 473
Score = 45.4 bits (106), Expect = 7e-05
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 34/210 (16%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQ-KIL 156
DR E +R + E + EK E + E ++++ + G V+E + K
Sbjct: 353 DREREKENERGRRRDRDYDKERGNEREKERERSRE------RSKEQRSRGEVEEKKHKED 406
Query: 157 MEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHL 216
+ + R K+++++E ++S S ++ + R S G R
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSR---SRNAGKRSRSRS----------- 452
Query: 217 GFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRR 276
+EK + + EK KR++ + R + + + S S+ + R+RSRS++R
Sbjct: 453 -----KEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERS 507
Query: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRS 306
+R S S+++ D+H R RS+S
Sbjct: 508 HKRDHSDSKDQS--------DKHDRRRSQS 529
Score = 38.5 bits (88), Expect = 0.008
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILM 157
DR E + R E S K ++ E K + G + D ++
Sbjct: 322 DRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRER-----EKENERGRRRDRDYDKERGN 376
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E EK R + +E +E R+ + ++ + H +D+R D K H
Sbjct: 377 EREKERERSRERSKEQRSRGEVEEKKHKEDKDDR-------RHRDDKR--DSKKEKKH-S 426
Query: 218 FIQIREKLDQLR---KTVAEKQEKRNQDRLRRREEREREERLSR-RSGSRTRDRRRSRSR 273
+ RE+ + R + ++ R++++ + + +E+ R RSGS + R+ S
Sbjct: 427 RSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGS----QGRTDSV 482
Query: 274 DRRRRRSRSTSRER-RKLSRSRSRDRHRRHRSRSRSHSRGHRR 315
++ ++R S S+E+ RK SRS+ R H+R S S+ S H R
Sbjct: 483 EKSKKREHSPSKEKSRKRSRSKERS-HKRDHSDSKDQSDKHDR 524
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 64.7 bits (156), Expect = 1e-10
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 163 RAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKL---HLGFI 219
R KKKE +E+ P + L E +A + + ++ R L K H
Sbjct: 234 RKKKKEKKEDIFRRFPVAPLIPYPLITKEDINA-IEMEEDKRDLISREISKFRDTHKKLE 292
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSR-----------RSGSRTRDRR 268
+ + K ++ R+ + +++ +R ++R R RE RERE R R R RDR
Sbjct: 293 EEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRD 352
Query: 269 RSRSRDRRRRRSRSTSRERRKLS-----RSRSRDRHR-RHRSRSRSHSRGHRRASRDR 320
R++ RDR R R R R+R + S RSRSR++ R R R R R R R R+R
Sbjct: 353 RTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERER-ERERERER 409
Score = 63.9 bits (154), Expect = 2e-10
Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 88 DHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAE--------KVHELNEEIGK---- 135
D E+ E RR ++ K + E S+E++A ++ K E E+I +
Sbjct: 191 DDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPV 250
Query: 136 -------LLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLR 188
L+ K + E D+ I E+ K R K+ EEE +++ R
Sbjct: 251 APLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERR 310
Query: 189 VCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRRE 248
E + +RR + + + + ++ R ++ ++R++DR R R+
Sbjct: 311 ERERERE----RERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERD 366
Query: 249 EREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRER-RKLSRSRSRDRHR-RHRSRS 306
ER S R+ R+R R +SR R+R R R R RER R+ R R R+R R R R R
Sbjct: 367 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERERE 426
Query: 307 RSHSRGHRRASRDRSAKYK 325
+ R D + K
Sbjct: 427 KDKKRDREEDEEDAYERRK 445
Score = 60.5 bits (145), Expect = 2e-09
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 111 TQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAE 170
T+E+I+A + + +K ++ EI K ++L E E ++ +E E+ R +++E E
Sbjct: 260 TKEDINA-IEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKER-RERERERE 317
Query: 171 EEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRK 230
E ++++ R E D DR D+ ++
Sbjct: 318 RERERREREREREREREREKEKERERERERDRDR---------------------DRTKE 356
Query: 231 TVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRER-RK 289
++ +R++DR R R ++R RS ++RDR R R R+R R R R RER R+
Sbjct: 357 RDRDRDRERDRDRDRERSSDRNKDR--SRSREKSRDRERERERERERERERERERERERE 414
Query: 290 LSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAKYK 325
R R R+R R + R R + R +R + K
Sbjct: 415 REREREREREREKDKKRDREEDEEDAYERRKLERKLREK 453
Score = 45.8 bits (107), Expect = 5e-05
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 110 ETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEA 169
+ ++ IS E+S + +L EE GK + +++ E E ++ E E+ R +++
Sbjct: 272 DKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERER---ERERERRERERE 328
Query: 170 EEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDR---------RLADHFGGKLHLGFIQ 220
E R ++++ R + D DR R +D + +
Sbjct: 329 REREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRS-----R 383
Query: 221 IREKL-DQLRKTVAEKQEKRNQDRLRRRE---EREREERLSRRSGSRTRDRRRSRSRDRR 276
REK D+ R+ E++ +R ++R R RE ERERE R+R R + + R
Sbjct: 384 SREKSRDRERERERERERERERERERERERERERERE-----------REREREKDKKRD 432
Query: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRD 319
R + ERRKL R + R++ ++ R ++ R+ +R+
Sbjct: 433 REEDEEDAYERRKLER-KLREKEAAYQERLKNWEIRERKKTRE 474
Score = 34.3 bits (77), Expect = 0.16
Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 29/214 (13%)
Query: 96 ECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKI 155
E +R E ++R E + E E ++ E +EE K E+ E +++
Sbjct: 402 EREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERL 461
Query: 156 ----LMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFG 211
+ E +K R +KEAE E +++ + + +L +D+DR ++
Sbjct: 462 KNWEIRERKKTREYEKEAEREEER-------RREMAKEAKRLKEFLEDYDDDRDDPKYYR 514
Query: 212 GKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREERE--REERLSRRSGSRTRDRRR 269
G ++ REK + E +DR R +EE E R+ L+ + +R
Sbjct: 515 GSALQKRLRDREK----------EMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQR 564
Query: 270 SRSRDRRRRRSR------STSRERRKLSRSRSRD 297
RRR+ + S E K + R+
Sbjct: 565 MEQEAERRRQPQIKQEPESEEEEEEKQEKEEKRE 598
Score = 31.6 bits (70), Expect = 1.0
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 227 QLRKTVAEKQEKRNQDRLRRREEREREE-RLSRRSGSRTRDRRRSRSRDRRR-------- 277
+L + + EK E Q+RL+ E RER++ R + R +RRR +++ +R
Sbjct: 445 KLERKLREK-EAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDY 503
Query: 278 ----------------RRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGH 313
+R R +E R R R++ R R + GH
Sbjct: 504 DDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGH 555
Score = 28.9 bits (63), Expect = 6.5
Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKA--------EQLGAEGNVDE 151
R +KRL + ++E+ A+ + + EL E +LLA+ +++ E
Sbjct: 514 RGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRR 573
Query: 152 SQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVC 190
+I E E ++++ E+E + P ++ + + C
Sbjct: 574 QPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPC 612
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 64.7 bits (156), Expect = 1e-10
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
REK + RK +K+E++ + R R++++ER+ER R + R+R+R + R ++RR+ R
Sbjct: 90 REKERRKRKKEKKKRERKQRGRRERKKKKERKER--ERENKQRRERKRKKRRKKKRRKER 147
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
+ER K R R + R + R + R +R R+ R+R +
Sbjct: 148 KREKERGKRERKRKK-RKKEEREKKRERNRKERKKERERKER 188
Score = 58.9 bits (141), Expect = 6e-09
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
+EK + ++ +++E++ ++R ++R+ER +ER R+ + R+R++ R+R++++ R
Sbjct: 61 KEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKER 120
Query: 282 STSRERRKLSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAK 323
K R R R + R R + R R RG R R + K
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKK 165
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
RE+ + R+ E++ +R + ++R++RER + R+ R + R+ R ++RR+R+
Sbjct: 41 REREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKE 100
Query: 282 STSRERRKLS-RSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
RER++ R R + + R+ R R R +R R + + K
Sbjct: 101 KKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRK 145
Score = 56.6 bits (135), Expect = 3e-08
Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 34/232 (14%)
Query: 94 IAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQ 153
+ C ++ +R +E ++E K E+ E E GK K + G E +
Sbjct: 19 MVSCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERK 78
Query: 154 KILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
+ E EK R +++E E R ++Q+
Sbjct: 79 R--KEREKQRKERREKERRKRKKEKKKRERKQR--------------------------- 109
Query: 214 LHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDR--RRSR 271
G + ++K ++ + KQ + + + RR+++R +E + + G R R R R+
Sbjct: 110 ---GRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKE 166
Query: 272 SRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R+++R R+R ++ R+ R R + R+ R + + R+ R ++
Sbjct: 167 EREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQ 218
Score = 50.4 bits (119), Expect = 2e-06
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 235 KQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR---RSRSTSRERRKLS 291
K+E+R +++ +R E+ER+ ++ + + R R + R+R+R+ + R RE+ +
Sbjct: 37 KKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRK 96
Query: 292 RSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
R + + + R + R + R R+R K +
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQR 130
Score = 43.5 bits (101), Expect = 3e-04
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 246 RREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSR 305
+RE ++ER R R R++ R R R ++ ++ R RER K + ++R ++ + R
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRK-KRERGKERERKRKEREKQRKER 89
Query: 306 SRSHSRGHRRASRDRSAKYK 325
R ++ + R K +
Sbjct: 90 REKERRKRKKEKKKRERKQR 109
Score = 41.2 bits (95), Expect = 0.001
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 7/202 (3%)
Query: 96 ECDRRTELAK--KRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQ 153
E +R+ E + KR E ++E E K EK E GK + E+ E +
Sbjct: 33 ESERKKERREREKRKREREKERKRE-RGKKEKKKRKKRERGK---ERERKRKEREKQRKE 88
Query: 154 KILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
+ E K + +KK+ E + R +++K R E R+ K
Sbjct: 89 RREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERK 148
Query: 214 LHLGFIQIREKLDQLRKTVAEKQEKRNQ-DRLRRREEREREERLSRRSGSRTRDRRRSRS 272
+ K + +K EK+ +RN+ +R + RE +ER ER R R + + R +
Sbjct: 149 REKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKD 208
Query: 273 RDRRRRRSRSTSRERRKLSRSR 294
R R+ R R+ + +R
Sbjct: 209 RKTDRQTDSQVFRPLRESAFNR 230
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 64.7 bits (156), Expect = 1e-10
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR--RSRSRDRRRRRSRSTSRER 287
K+ + R++ R RRR R R + RRS S+ + +R + RS+ R R+R RS+SR+
Sbjct: 1855 KSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDN 1914
Query: 288 RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
RK R+RSR RR RS + S R R R RS
Sbjct: 1915 RKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRS 1948
Score = 64.3 bits (155), Expect = 1e-10
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 235 KQEKRNQDRLRRREEREREERLSRRS----GSRTRDRRR-SRSRDRRRRRSRSTSRERRK 289
++ K+N++R + +E++R+ L RS S + R+R S SR R R+RS S S+ R
Sbjct: 1801 EKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRS-SKSKSHRS 1859
Query: 290 LSRSRSRDRHRRHRSRSRSHSRGHRRAS---RDRSAKYK 325
+RSRSR R RR SRSRS SRG R S R RS K++
Sbjct: 1860 QTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHR 1898
Score = 63.2 bits (152), Expect = 3e-10
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 218 FIQIREKLDQLRKTV----AEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRS- 272
F+++++ ++ +K EK++KR+ R + + E SR+ S +R R R RS
Sbjct: 1793 FVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSS 1852
Query: 273 ---RDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSR-SRSHSRGHRRASRDRSAK 323
R + RSRS SR RR+ SRSRS+ R RR S+ R S HR SR+R K
Sbjct: 1853 KSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRK 1907
Score = 59.3 bits (142), Expect = 4e-09
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR--- 278
+++ LR + ++ R R E R R + S +S S R + RSRSR RRRR
Sbjct: 1816 KKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH-RSQTRSRSRSRRRRRSS 1874
Query: 279 RSRSTSRERRKLSRSRSR--DRHR---RHRSRSRSHSRGHRRASRDRS 321
RSRS SR RR +S+ + + +HR R R R RS SR +R+ R RS
Sbjct: 1875 RSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARS 1922
Score = 57.4 bits (137), Expect = 2e-08
Identities = 48/113 (42%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRD-RRRSRSRDRRR--- 277
R++ + R E++ KR+ R R+ R R SRRS S T RRRSRS RRR
Sbjct: 1891 RKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFS 1950
Query: 278 ----RRSRSTSRERRKLSRSRSRDRHRRHRS---RSRSHSRGHRRASRDRSAK 323
RRSR+ SR R SR RSR RR R+ RSR+ SR R SR R ++
Sbjct: 1951 ISPSRRSRTPSRRSRTPSR-RSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
Score = 42.7 bits (99), Expect = 4e-04
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRS-RSRDR---RRRRSRSTSRERRKLS 291
+EKR + R + RER +R S +RD R++ R+R R RR RS + SR RR S
Sbjct: 1888 KEKRKRSPKHRSKSRER-----KRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRS 1942
Query: 292 RSRSRDRHRRHRSRSRSHSRGHRRASR 318
R R RSR+ SR R SR
Sbjct: 1943 VGRRRSFSISPSRRSRTPSRRSRTPSR 1969
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/117 (35%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
Query: 204 RRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR 263
RR + G + R R++ + R R R R R SRRS R
Sbjct: 1937 RRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR-RSRTPSRRSRTPSRRS--R 1993
Query: 264 TRDRRRSRSRDRRRRRSRSTS-----RERRKLSRSRSRDRHRRHRSRSRSHSRGHRR 315
T RRR RSR RRRS S S R R L R SR RR RSRS R +R
Sbjct: 1994 TPSRRR-RSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERL-SRRSGSRTRDRRRSRSRDR---RRRRSRSTS 284
R++ + +R++ RR R R SRRS + +R R R R RRRRSRS
Sbjct: 1946 RRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVV 2005
Query: 285 RERRKLSRS-----RSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R RR S S RSR RR SRS + R + R RS K
Sbjct: 2006 R-RRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPK 2048
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 64.7 bits (156), Expect = 1e-10
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR--RSRSRDRRRRRSRSTSRER 287
K+ + R++ R RRR R R + RRS S+ + +R + RS+ R R+R RS+SR+
Sbjct: 1855 KSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDN 1914
Query: 288 RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
RK R+RSR RR RS + S R R R RS
Sbjct: 1915 RKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRS 1948
Score = 64.3 bits (155), Expect = 1e-10
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 235 KQEKRNQDRLRRREEREREERLSRRS----GSRTRDRRR-SRSRDRRRRRSRSTSRERRK 289
++ K+N++R + +E++R+ L RS S + R+R S SR R R+RS S S+ R
Sbjct: 1801 EKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRS-SKSKSHRS 1859
Query: 290 LSRSRSRDRHRRHRSRSRSHSRGHRRAS---RDRSAKYK 325
+RSRSR R RR SRSRS SRG R S R RS K++
Sbjct: 1860 QTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHR 1898
Score = 63.2 bits (152), Expect = 3e-10
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 218 FIQIREKLDQLRKTV----AEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRS- 272
F+++++ ++ +K EK++KR+ R + + E SR+ S +R R R RS
Sbjct: 1793 FVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSS 1852
Query: 273 ---RDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSR-SRSHSRGHRRASRDRSAK 323
R + RSRS SR RR+ SRSRS+ R RR S+ R S HR SR+R K
Sbjct: 1853 KSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRK 1907
Score = 59.3 bits (142), Expect = 4e-09
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR--- 278
+++ LR + ++ R R E R R + S +S S R + RSRSR RRRR
Sbjct: 1816 KKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH-RSQTRSRSRSRRRRRSS 1874
Query: 279 RSRSTSRERRKLSRSRSR--DRHR---RHRSRSRSHSRGHRRASRDRS 321
RSRS SR RR +S+ + + +HR R R R RS SR +R+ R RS
Sbjct: 1875 RSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARS 1922
Score = 57.4 bits (137), Expect = 2e-08
Identities = 48/113 (42%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRD-RRRSRSRDRRR--- 277
R++ + R E++ KR+ R R+ R R SRRS S T RRRSRS RRR
Sbjct: 1891 RKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFS 1950
Query: 278 ----RRSRSTSRERRKLSRSRSRDRHRRHRS---RSRSHSRGHRRASRDRSAK 323
RRSR+ SR R SR RSR RR R+ RSR+ SR R SR R ++
Sbjct: 1951 ISPSRRSRTPSRRSRTPSR-RSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
Score = 42.7 bits (99), Expect = 4e-04
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRS-RSRDR---RRRRSRSTSRERRKLS 291
+EKR + R + RER +R S +RD R++ R+R R RR RS + SR RR S
Sbjct: 1888 KEKRKRSPKHRSKSRER-----KRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRS 1942
Query: 292 RSRSRDRHRRHRSRSRSHSRGHRRASR 318
R R RSR+ SR R SR
Sbjct: 1943 VGRRRSFSISPSRRSRTPSRRSRTPSR 1969
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/117 (35%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
Query: 204 RRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR 263
RR + G + R R++ + R R R R R SRRS R
Sbjct: 1937 RRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSR-RSRTPSRRSRTPSRRS--R 1993
Query: 264 TRDRRRSRSRDRRRRRSRSTS-----RERRKLSRSRSRDRHRRHRSRSRSHSRGHRR 315
T RRR RSR RRRS S S R R L R SR RR RSRS R +R
Sbjct: 1994 TPSRRR-RSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERL-SRRSGSRTRDRRRSRSRDR---RRRRSRSTS 284
R++ + +R++ RR R R SRRS + +R R R R RRRRSRS
Sbjct: 1946 RRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVV 2005
Query: 285 RERRKLSRS-----RSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R RR S S RSR RR SRS + R + R RS K
Sbjct: 2006 R-RRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPK 2048
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 63.9 bits (154), Expect = 2e-10
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 96 ECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKI 155
E +R E + R + Q E + A+ E+ + + E + + Q E + ++
Sbjct: 130 ETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERR 189
Query: 156 LMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
E+ R ++KE + E R+S ++++ E + DR+ +
Sbjct: 190 ----ERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQ 245
Query: 216 LGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
RE+ + R+T +K+ +R +DR R R+ R++E R R R RR R R+
Sbjct: 246 AE----RERASE-RETERDKERERERDRDRDRDRRQKERE---RQTDRKRQRRTERDRET 297
Query: 276 RRRRSRSTSRERRKLSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAK 323
R+R R RER + R+R R+R R R R R R R R R+R K
Sbjct: 298 ERKRERQRERERER-ERNRKRERERERERERERQRETER-DREKERERKRK 346
Score = 62.8 bits (151), Expect = 4e-10
Identities = 54/224 (24%), Positives = 89/224 (39%), Gaps = 9/224 (4%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILM 157
DR E + R E + + E + EK +E + + + G + D +
Sbjct: 92 DRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQR---- 147
Query: 158 EVEKVRAKKKEAEEEY-RNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHL 216
E E+ R +KE E + R + +QK R E + R + K
Sbjct: 148 ERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKEN----KTED 203
Query: 217 GFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRR 276
+ + ++ R+T E + KR DR R R+ + ER + R +R R ++R
Sbjct: 204 RHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE 263
Query: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
R R R R+RR+ R R DR R+ R+ + R R+R
Sbjct: 264 RERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRER 307
Score = 59.3 bits (142), Expect = 4e-09
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 229 RKTVAEKQEKRNQDRLRRRE-ERERE-ERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRE 286
R+ E++ +RN+ R R RE ERERE +R + R + R+R+R R + R R+R T RE
Sbjct: 303 RQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGRE 362
Query: 287 -RRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
RR+ R R R+ R R R + R R RDR
Sbjct: 363 GRRQAERERERE---RERDRQSAREREERERDRDR 394
Score = 58.9 bits (141), Expect = 6e-09
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 234 EKQEKRNQDRLRRREERERE-------ERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRE 286
+++ R ++R RRRE+R+ E ER + R RDR R R RDR + R R T RE
Sbjct: 53 DRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112
Query: 287 R---RKLSRSRSRDRHRR-HRSRSRSHSR---GHRRASRDRSAK 323
R R+ R+R ++R R R R R G R R R A+
Sbjct: 113 RDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAE 156
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRRE---EREREERLSR-RSGSRTRDRRRSRSRDRRR 277
REK R+T +++ +R +DR R+R+ ER+R+ R R R RDR+R + R+R++
Sbjct: 66 REKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQK 125
Query: 278 RRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
R R T RE + R R D R + + R+ R+R
Sbjct: 126 ERERETEREGER-GRDRQTDGQRERERQRDAEKERERQTDRER 167
Score = 57.0 bits (136), Expect = 2e-08
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 15/112 (13%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR------RSRSRDR 275
REK ++ R+T E+ +R ++R R++ERERE + R G R RDR+ R R RD
Sbjct: 101 REK-ERERQTDRERDRQREKER-NRQKERERE---TEREGERGRDRQTDGQRERERQRDA 155
Query: 276 RRRRSRSTSRER-RKLSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAK 323
+ R R T RER R+ R+R ++R R R R R R + DR ++
Sbjct: 156 EKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSE 207
Score = 56.6 bits (135), Expect = 3e-08
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 30/228 (13%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
R+TE +++ AE + E E+ E + + + + E+ E D ++ E
Sbjct: 236 RKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKER---ERQTDRKRQRRTE 292
Query: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
++ +K+E + E R + ++++ R E + DR
Sbjct: 293 RDRETERKRERQRE-RERERERNRKRERERERERERERQRETERDRE------------- 338
Query: 219 IQIREKLDQLRKTVAEKQEKRNQDRLRRRE---EREREERLSRRSGSRTRDRRRSRSRDR 275
+ RE+ + R+T +++ R R RR+ ERERE R+S +R R R RDR
Sbjct: 339 -KERER-KRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDR 396
Query: 276 RRRRSRSTSRER---RKLSRSRSRDRHR-----RHRSRSRSHSRGHRR 315
++ R R T ++R R+ + R R++ R R R R R +G R
Sbjct: 397 QKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRER 444
Score = 55.5 bits (132), Expect = 6e-08
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 98 DRRTELAKKRLAET---------QEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGN 148
+R TE K+R E Q+E + K ++ E + E + + + E
Sbjct: 253 ERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERE 312
Query: 149 VDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLAD 208
+ ++ E E+ R +++E E + +Q ++ DR
Sbjct: 313 RNRKRERERERERERERQRETERDREKERERKRKRQTEM---------------DRERNR 357
Query: 209 HFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR 268
G + + RE+ + + A ++E+R +DR R R++ + R G R +++
Sbjct: 358 QTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQ 417
Query: 269 RSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR---RHRSRSRSHS 310
R R +DR R R RER K + R RDR R R R R S
Sbjct: 418 REREKDRESERGRERGREREK-QKGRERDRERQTDRQAGRQRKRS 461
Score = 55.1 bits (131), Expect = 8e-08
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRRE-ERERE---ERLSRRSGSRTRDRRRS----- 270
Q + ++ R E++ +R ++R R+RE ER+RE ER +R R+R R
Sbjct: 304 QRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREG 363
Query: 271 -----RSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
R R+R R R R ++RER + R R RDR + ++ G R + R
Sbjct: 364 RRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQR 418
Score = 54.3 bits (129), Expect = 1e-07
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
R++ + + ++EK Q+R R +RE+E + R R R+R R R + R R
Sbjct: 167 RQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKR 226
Query: 282 STSRER---RKLSRSRSRDRHR-----RHRSRSRSHSRGHRRASRDRSAKYK 325
T RER RK R R + R R R + R R RDR + K
Sbjct: 227 QTDRERDRQRKTEREREKQAERERASERETERDKERER-ERDRDRDRDRRQK 277
Score = 53.5 bits (127), Expect = 2e-07
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
R+ + + + + D R ++ERE R +R R DR+R R R++ R R R RER+
Sbjct: 39 RRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQ 98
Query: 289 KLSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRSAK 323
R R ++R R R R R R R +R+ R+R +
Sbjct: 99 ---RDREKERERQTDRERDRQREKER-NRQKERERETE 132
Score = 47.8 bits (112), Expect = 1e-05
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR--RSRSRDRRRRR 279
REK ++ R+ E++ +R +R R R+ + ER +R + R+R+ R R R R R
Sbjct: 117 REK-ERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNR 175
Query: 280 SRSTSRER-RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
+ RE+ R+ R R R R + +++ R RG R R+R +
Sbjct: 176 QKEREREKNRQERRERERQREKENKTEDRHSERGRER-ERERETE 219
Score = 46.6 bits (109), Expect = 3e-05
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 224 KLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRR------R 277
K D+ R+ +++++R + R R+ + +ER ++ R +R R RDR+ R
Sbjct: 90 KRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRER 149
Query: 278 RRSRSTSRER-RKLSRSRSRDRHR-RHRSRSRSHSRGHRR 315
R R +ER R+ R R R R R + R R +R RR
Sbjct: 150 ERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERR 189
Score = 42.0 bits (97), Expect = 7e-04
Identities = 42/195 (21%), Positives = 72/195 (36%), Gaps = 49/195 (25%)
Query: 96 ECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKI 155
E +R E ++R ET+ + E K ++ E++ E + Q G EG ++
Sbjct: 318 ERERERERERERQRETERDREKERERKRKRQTEMDRE------RNRQTGREGRRQAERER 371
Query: 156 LMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
E E+ R +E EE R+ D DR+
Sbjct: 372 ERERERDRQSAREREERERD------------------------RDRDRQK--------- 398
Query: 216 LGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
++ R+T ++ +R ++ R RE+ ER R R + + R R R+R
Sbjct: 399 ----------ERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRER 448
Query: 276 RRRRSRSTSRERRKL 290
+ R R+R L
Sbjct: 449 QTDRQAGRQRKRSTL 463
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 258 RRSGSRTRDRRRSRS----------RDRRRRRSRSTSRERRKLSRSRSRDR-HRRHRSRS 306
RR GS+ RRR R+R R++ R RE+R+ R R R RR + R
Sbjct: 29 RRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRH 88
Query: 307 RSHSRGHRRASRDR 320
R R HR RDR
Sbjct: 89 RKRDR-HRERQRDR 101
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 63.9 bits (154), Expect = 2e-10
Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 25/307 (8%)
Query: 19 RDGDETRQRVKFTDDRVCKS--HLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASK 76
RD +TR R + D R + + D + D HD R + K
Sbjct: 459 RDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRK 518
Query: 77 ERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAE-KVHELNEEIGK 135
E D + E ++ + + + E RTE+ + E++ EI + ++ +V EL E+ G
Sbjct: 519 E-DTYPE-ESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEK-GS 575
Query: 136 LLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSA 195
++ Q+ + + + + E + R+ SSF+++
Sbjct: 576 RGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERR---------- 625
Query: 196 YLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREER 255
H R + + I+ + + D+L + E++E+R DR+ R + ER
Sbjct: 626 ----HGERDRRDNRERDQRPSSPIRHQGRNDELERD--ERREERRVDRVDDRRDERARER 679
Query: 256 LSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR-RHRSRSRSHSR-GH 313
R R R+R R R RDR R + R RER + R R R++ R R R R R H R
Sbjct: 680 DRERERDRERERERERERDREREKERELERERAR-EREREREKERDRERDRDRDHDRERE 738
Query: 314 RRASRDR 320
R RDR
Sbjct: 739 RERERDR 745
Score = 61.2 bits (147), Expect = 1e-09
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
EK+ + ++R R RE +ER R R DR R R R+R R + R RE R+ R
Sbjct: 702 EKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERE 761
Query: 294 RSRDRHR-RHRSRSRSHSRG-HRRASRDRSAKYK 325
R R+R R R R R R+ R R RD K K
Sbjct: 762 RERERERERERERERARERDKERERQRDWEDKDK 795
Score = 60.8 bits (146), Expect = 2e-09
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRREE---------RERE-ERLSRRSGSRTRDRRRSRSRDR 275
D+ R+ E++ +R ++R R RE+ RERE ER R R RDR R R+R
Sbjct: 680 DRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERER 739
Query: 276 RRRRSRSTSRERRKLSRSRSRDRHR-RHRSRSRSHSRGHRR 315
R R R RER + R R R+R R R R R R R R
Sbjct: 740 ERERDREKEREREREERERERERERERERERERERERARER 780
Score = 58.5 bits (140), Expect = 8e-09
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRER-RKLSR 292
E++ +R +DR R +E ER R R ++R R R RDR R R RER R+ R
Sbjct: 690 ERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKER 749
Query: 293 SRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
R R+ R R R R R R R+R+
Sbjct: 750 EREREERERERERERERER-ERERERERA 777
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
R+ E++++R +R R RE E+ R R RD R R R+R R R + RER
Sbjct: 695 RERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERERE 754
Query: 289 KLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRSAKYK 325
+ R R R+R R R R R R +R R R+R ++
Sbjct: 755 ERERERERERERERERERERERAR-ERDKERERQRDWE 791
Score = 57.0 bits (136), Expect = 2e-08
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 229 RKTVAEKQEKRNQDRLRRRE-ERER-EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRE 286
R+ E++ +R+++R + RE ERER ER R R R+R R R DR R R R RE
Sbjct: 687 RERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDRE 746
Query: 287 RRKLSRSRSRDRHR-RHRSRSRSHSRGHRRA-SRDR 320
+ + R+R R R R R R R RA RD+
Sbjct: 747 KEREREREERERERERERERERERERERERARERDK 782
Score = 56.6 bits (135), Expect = 3e-08
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSR 285
D+ R E++ +R +DR + RE REREER R R R+R R R R+R R R + R
Sbjct: 728 DRDRDHDRERERERERDREKERE-REREERERERERERERERERERERERARERDKERER 786
Query: 286 ERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
+R + + RD R R R R R +R +K
Sbjct: 787 QRDWEDKDKGRDDRREKREEIR-EDRNPRDGHDERKSK 823
Score = 55.1 bits (131), Expect = 8e-08
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 234 EKQEKRNQDRLRRRE-EREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSR 292
E+ R+ DR R RE ER+RE+ R R R+R R R R+R R R R +RER K
Sbjct: 726 ERDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDK--- 782
Query: 293 SRSRDRHRRHRSRSRSHSRGHRRASRD 319
R R R + + R R R R+
Sbjct: 783 ERERQRDWEDKDKGRDDRREKREEIRE 809
Score = 53.1 bits (126), Expect = 3e-07
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRRE-ERERE-ERLSRRSGSRTRDRR-RSRSRDRRRRRSRS 282
++ R+ E++++R+++R R R+ +RERE ER R R R+R R R R+R R R R
Sbjct: 710 ERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERE 769
Query: 283 TSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRD 319
RER + +R R ++R R+ + R RR R+
Sbjct: 770 RERERER-ARERDKERERQRDWEDKDKGRDDRREKRE 805
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRREERERE---ERLSRRSGSRTRDRRRSRSRDRRRRR--- 279
D R+ E++ R ++R R REERERE ER R R R+R R R ++R R+R
Sbjct: 732 DHDRERERERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWE 791
Query: 280 ----SRSTSRERRKLSRS--RSRDRHRRHRSRSRSHSRG 312
R RE+R+ R RD H +S+ R + G
Sbjct: 792 DKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEG 830
Score = 46.2 bits (108), Expect = 4e-05
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 235 KQEKRNQDRLRR-REEREREERLSRRSGSRTRDRRRSRS-RDRRRRRSRSTSRERRKLSR 292
+ E+R R +R RE+ REER + S +RD R R RD R RR +R+RR+L
Sbjct: 413 RHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRD 472
Query: 293 SRS-RD-RHRRHRSRSRSHSRGHR--RASRD 319
SR RD R R SR SR R R++RD
Sbjct: 473 SRDMRDSREMRDYSRDTKESRDPRDSRSTRD 503
Score = 45.1 bits (105), Expect = 9e-05
Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 35/151 (23%)
Query: 198 GLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLR-RREEREREERL 256
G HD++R H + H R K D+ + + E++ +++Q R R++RE +
Sbjct: 399 GRHDHERTSQSH--DRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGR 456
Query: 257 SRRSGSRTRDRRRSR-SRDRRRRRSRSTSRERRKLSR----------SRS---------- 295
RR TRDRR R SRD R SRE R SR SRS
Sbjct: 457 DRRDARDTRDRRELRDSRDMR------DSREMRDYSRDTKESRDPRDSRSTRDAHDYRDR 510
Query: 296 --RDRHRR---HRSRSRSHSRGHRRASRDRS 321
RD HR+ + SRS+ R H R R+
Sbjct: 511 EGRDTHRKEDTYPEESRSYGRNHLREESSRT 541
Score = 43.5 bits (101), Expect = 3e-04
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGS----RTRDRRRSRSRDRRRRRS--RSTSRER 287
+++++ DR R RE R+ +R R R RDR R R R+R R R R RER
Sbjct: 1300 QERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRER 1359
Query: 288 RKL-----SRSRSRDRHRRHRS 304
+L R R RDR R S
Sbjct: 1360 ERLISDSVERDRDRDRDRTFES 1381
Score = 42.7 bits (99), Expect = 4e-04
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 239 RNQDRLRRREEREREERLSR-RSGSRTRDRR--RSRSRDRRRRRSRSTSRE-RRKLSRSR 294
+ +DR ERERE R +R R R D+ R+R RDR R R R R+ RR L R R
Sbjct: 1300 QERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRER 1359
Query: 295 SR---DRHRRHRSRSRSHS 310
R D R R R R +
Sbjct: 1360 ERLISDSVERDRDRDRDRT 1378
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSR------RSGSRTRDRRRSRSR-- 273
R+ DQ R + E++ RR+ RER++R S R+ RD RR R
Sbjct: 611 RDNRDQARDSSFERRHGERD----RRDNRERDQRPSSPIRHQGRNDELERDERREERRVD 666
Query: 274 ---DRRRRRSRSTSRERRKLSRSRSRDRHR-RHRSRSRSHSRGHRRASRDRS 321
DRR R+R RER R R+R R R R R R + R R+R+
Sbjct: 667 RVDDRRDERARERDRERE-----RDRERERERERERDREREK-ERELERERA 712
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 222 REKLDQL------RKTVAEKQEKRNQDRLRRREEREREERLSRRSGS-------RTRDR- 267
+ ++DQL R T +++Q+ R+ RR E + ++ RSGS + RDR
Sbjct: 1248 KSRIDQLKRGEPSRSTSSDRQDSRSHSS--RRSSPESDRQVHSRSGSFDSRDRLQERDRY 1305
Query: 268 --RRSRSRDRRRRRSRSTSRERRK-LSRSRSRDRHR-RHRSRSRSHSR 311
R R R+RR R R R+ K R+R RDR R R R R R R
Sbjct: 1306 EHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRR 1353
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/227 (21%), Positives = 86/227 (37%), Gaps = 33/227 (14%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILM 157
+RR E R+ + ++E + E + E+ E E E D ++
Sbjct: 658 ERREERRVDRVDDRRDERARERDRERERDRERERE------------RERERDREREKER 705
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E+E+ RA+++E E E + HD +R +
Sbjct: 706 ELERERAREREREREKERDRERDRDRD---------------HDRERERERERDREKERE 750
Query: 218 FIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRR 277
+ + ++ R+ E++ +R ++R R R ++ERE + + RD RR + + R
Sbjct: 751 REREERERERERERERERERERERERARER-DKERERQRDWEDKDKGRDDRREKREEIRE 809
Query: 278 RRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKY 324
R+ + RK S+ R+R S S S RR S Y
Sbjct: 810 DRNPRDGHDERK-----SKKRYRNEGSPSPRQSPKRRREHSPDSDAY 851
Score = 41.2 bits (95), Expect = 0.001
Identities = 41/123 (33%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 200 HDNDRRLADHFGGK---LHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERL 256
+D+ R D G+ LH G + REK L T + K D+L+R E
Sbjct: 1211 NDSAHRSGDDQSGRKRVLHSGS-RDREKTKSLEIT---GERKSRIDQLKRGEPSRSTS-- 1264
Query: 257 SRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRA 316
S R SR+ RRS R+ SRS S + R + R R H R R R R +R R
Sbjct: 1265 SDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTR-QREW 1323
Query: 317 SRD 319
RD
Sbjct: 1324 DRD 1326
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 238 KRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRST-SRERRKLSRSRSR 296
+R Q R R + R S++ DRR R D R +R R SRE R+ + +S
Sbjct: 383 QRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSS 442
Query: 297 DR-HRRHRSRSRSHSRGHRRASRDR 320
R HR R R R +RDR
Sbjct: 443 SRDHRDDREPRDGRDRRDARDTRDR 467
Score = 39.3 bits (90), Expect = 0.005
Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 233 AEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSR 292
A+K RN+DR R RE ER RR R R+R S S +R R R R R
Sbjct: 1327 ADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVERDRDRDRD-----RTFES 1381
Query: 293 SRSRDRHRRHRSRSRSHSRGHRRASRDRSA 322
S+ R H R SRD A
Sbjct: 1382 SQIESVKRCEAKLEGEHERDLESTSRDSLA 1411
Score = 37.7 bits (86), Expect = 0.014
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRS 280
+REK + ++ ++R++ R R +R+RE+ SR R ++ +S SRD R R
Sbjct: 395 MREKGRHDHERTSQSHDRRHERREDTRGKRDREKD-SREE--REYEQDQSSSRDHRDDRE 451
Query: 281 RSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRD 319
R+RR +RDR SR SR R SRD
Sbjct: 452 PRDGRDRR--DARDTRDRRELRDSRDMRDSREMRDYSRD 488
Score = 37.0 bits (84), Expect = 0.024
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 43/264 (16%)
Query: 77 ERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKL 136
ERD E +D ++ E R + ++R E + E E + EK EL E +
Sbjct: 655 ERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERERARE 714
Query: 137 LAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAY 196
+ + + D + E E+ R + +E E E ++++ R E
Sbjct: 715 REREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERE----- 769
Query: 197 LGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERL 256
+ +R A R+K ++ R+ E ++K DR +REE RE+R
Sbjct: 770 ---RERERERARE------------RDK-ERERQRDWEDKDKGRDDRREKREEI-REDRN 812
Query: 257 SRRSGSRTRDRRRSRSRDRRR--RRSRSTSRERRKLS-----RSRSRDRHRRHR------ 303
R D R+S+ R R R + + RR+ S + D++ +HR
Sbjct: 813 PRDG----HDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVV 868
Query: 304 --SRSRSHSRGHRRASRDRSAKYK 325
SRS S H + DR ++K
Sbjct: 869 RPQESRSLSPSH--LTEDRQGRWK 890
Score = 36.2 bits (82), Expect = 0.041
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 242 DRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRER-RKLSRSRSRDRHR 300
D R +ER+R E R R R+R RD + R+ R+R R+ R R RD+ R
Sbjct: 1294 DSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRR 1353
Query: 301 ---RHRSRSRSHSRGHRRASRDRSAKYK 325
R R R S S R RDR ++
Sbjct: 1354 DLDRERERLISDS-VERDRDRDRDRTFE 1380
Score = 34.3 bits (77), Expect = 0.16
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 35/133 (26%)
Query: 223 EKLDQLRKTVAEKQEKRNQDRLR-------RREEREREERL-------SRRSGSRTRDRR 268
EK++ T+ + Q ++ D+ R R RL + RSG R+
Sbjct: 1166 EKVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRK 1225
Query: 269 R---SRSRDRRR---------RRSRSTSRERRKLSRSRSRDRH--RRHRSRSRS------ 308
R S SRDR + R+SR +R + SRS S DR R H SR S
Sbjct: 1226 RVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQ 1285
Query: 309 -HSRGHRRASRDR 320
HSR SRDR
Sbjct: 1286 VHSRSGSFDSRDR 1298
Score = 32.7 bits (73), Expect = 0.45
Identities = 61/282 (21%), Positives = 102/282 (36%), Gaps = 70/282 (24%)
Query: 110 ETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEG-NVDESQKILMEVEK----VRA 164
ET + S + VHEL+ E+ + + E + E N+++ ++I+++ E VR+
Sbjct: 145 ETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRS 204
Query: 165 K-------KKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRL----------- 206
K +K ++ R S P SS +K R S+ L + +
Sbjct: 205 KLSPSPSLRKSSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTP 264
Query: 207 -------ADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREERERE------ 253
D GK + ++++++++ KT K R+ +R R + ++ R
Sbjct: 265 SPPPPIPEDIALGKKYKEKYKVKDRIEE--KTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322
Query: 254 -----------------ERLSRRSGSRTRDRRRSRSRDR------RRRRSRSTSRERRKL 290
+ R S S R R S S R RR S S
Sbjct: 323 HHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSP 382
Query: 291 SRSRSRDRHRR---------HRSRSRSHSRGHRRASRDRSAK 323
R +S RHR H S+SH R H R R +
Sbjct: 383 QRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKR 424
Score = 30.4 bits (67), Expect = 2.2
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
RE D R T + + ++ + R+RE R + R + RS R+ R S
Sbjct: 480 REMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESS 539
Query: 282 STS--RERRKLSRS--------RSRDRHRRHRSRSRSHSRGHRRASRDRSAKY 324
T E R SRS RSR R + SRG + S ++ Y
Sbjct: 540 RTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNY 592
Score = 30.0 bits (66), Expect = 2.9
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 240 NQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRH 299
++DR + + ER SR + + RS S DR+ RS S SR S +
Sbjct: 1232 SRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHS--------SRRSSPESD 1283
Query: 300 RRHRSRSRSHSRGHRRASRDR 320
R+ SRS S R RDR
Sbjct: 1284 RQVHSRSGSFDSRDRLQERDR 1304
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 62.8 bits (151), Expect = 4e-10
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 207 ADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRD 266
AD + + G I+ R D R + N +R E++ R SGSR+R
Sbjct: 139 ADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRS 198
Query: 267 RRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
R R RSR R RR SRS S R +S+SRSR R R + RSRS S+G + S+ +S
Sbjct: 199 RSRRRSRSRSRRSSRSRS---RSISKSRSRSR-SRSKGRSRSRSKGRKSRSKSKS 249
Score = 57.0 bits (136), Expect = 2e-08
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 239 RNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS--- 295
R++ R RRR R R R S RS SR+ + RSRSR R + RSRS S+ R+ S+S+S
Sbjct: 195 RSRSRSRRRS-RSRSRR-SSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPK 252
Query: 296 --RDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R H RSRS+ R SR RS K
Sbjct: 253 SDRGSHSHSRSRSKDEYEKSRSRSRSRSPK 282
Score = 55.8 bits (133), Expect = 5e-08
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 154 KILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
++++E R ++ ++ R + + K R E + D R L G +
Sbjct: 111 RLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTE 170
Query: 214 LH---LGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRS 270
++ + I+ + + R + R++ R R R R R S SR+R R RS
Sbjct: 171 INGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRS 230
Query: 271 RSRDRRR---RRSRSTSRERRKL-------SRSRSRDRHRRHRSRSRSHS 310
+ R R R R+SRS S+ + K SRSRS+D + + RSRSRS S
Sbjct: 231 KGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRS 280
Score = 51.6 bits (122), Expect = 9e-07
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
++K R R RRS SR+R RSRSR + RSRS SR + + SRSRS
Sbjct: 180 EDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGR-SRSRS 238
Query: 296 RDRHRRHRSRSRSHS-RGHRRASRDRS 321
+ R R +S+S+ S RG SR RS
Sbjct: 239 KGRKSRSKSKSKPKSDRGSHSHSRSRS 265
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR---------RSRSRDRRRRR 279
RK+ ++ + K DR R R + +S SR+R R +S+SR R + R
Sbjct: 241 RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSR 300
Query: 280 SRS------------TSRERRKLSRSRSRDRHRRHRSRSRSHSR 311
S S + +R SRSRSR R + RSRSRS SR
Sbjct: 301 SNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKS-RSRSRSSSR 343
Score = 30.0 bits (66), Expect = 2.9
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 263 RTRDRRRSRSRDRRRRRSRSTSRE 286
R R RSRSR + R RSRS+SR+
Sbjct: 321 RATSRSRSRSRSKSRSRSRSSSRD 344
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 62.8 bits (151), Expect = 4e-10
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
E++ R DR R R+ + R R+RDRRR SR R R RS+S RERR R
Sbjct: 19 ERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERE 78
Query: 294 RSRDRHRRHRSRSRSHSRGHRRASRDR 320
R ++R R + R R GHRR +DR
Sbjct: 79 RDKERDRNKKDRDRDKD-GHRR-DKDR 103
Score = 60.8 bits (146), Expect = 2e-09
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 224 KLDQLRKTVAEKQEKRNQDRLRR--REEREREERLSRRSGSRTRDRRRSRSRDRRRR--- 278
K ++ R +++ R++DR ++ + R RR GSR+R R RS+S +R RR
Sbjct: 17 KEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKE 76
Query: 279 RSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHR----RASRDRSAK 323
R R R+R K R R +D HRR + R RS R ++ +DR +K
Sbjct: 77 RERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK 125
Score = 59.7 bits (143), Expect = 3e-09
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRK---- 289
E +K+++D +EER+R R R R RDR+ S S+DR+R RS R+RR+
Sbjct: 4 ELADKKDRDASPSKEERKRS-RTPDRERDRDRDRKSSPSKDRKRHRS----RDRRRGGSR 58
Query: 290 ---LSRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
SRS+S +R RRH+ R R R + RDR
Sbjct: 59 SRSRSRSKSAERERRHKERERDKERDRNKKDRDR 92
Score = 34.3 bits (77), Expect = 0.16
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 222 REKLDQLRKTVAEKQEKRNQ---------DRLRRREEREREERLSRRSGSRTRDRRRSRS 272
++++++ ++ + E+++KR Q + + RE RER ER+ R + + R +
Sbjct: 178 QQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKI 237
Query: 273 RDRRRRRSRSTSRERRKLS--RSRSRDRHRRHR 303
R+ + + + + R L + R R RH R
Sbjct: 238 REEKDKSKELHAIKERYLGGIKKRRRTRHLNDR 270
Score = 33.9 bits (76), Expect = 0.20
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 22/105 (20%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRR-------------EEREREERLSRRSGSRTR---DRRR 269
D+ RK+ K KR++ R RRR ERER + R R R DR R
Sbjct: 33 DRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDR 92
Query: 270 SRSRDRRRRRSRSTSRERRKLSRSRSRD-RHRRHRSRSRSHSRGH 313
+ RR + R+R LS R +D + R+ R + H
Sbjct: 93 DKDGHRRDK-----DRKRSSLSPGRGKDFKSRKDRDSKKDEEDEH 132
Score = 30.4 bits (67), Expect = 2.2
Identities = 19/98 (19%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 223 EKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRS 282
E L + ++ V E+Q ++R +R++ ++ L R+ ++R R R+R R +
Sbjct: 172 EALKRRQQEVEERQRMLEEERKKRKQFQD----LGRKMLEDPQERERRERRERMERETNG 227
Query: 283 TSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
E + +D+ + + + G ++ R R
Sbjct: 228 NEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTR 265
Score = 29.6 bits (65), Expect = 3.8
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 233 AEKQEKRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKL 290
AE++ + + R + EER+R EE +R + R+ R RR R RER +
Sbjct: 167 AEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRER---RERMER 223
Query: 291 SRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
+ + D R + R A ++R
Sbjct: 224 ETNGNEDEEGRQKIREEKDKSKELHAIKER 253
Score = 28.5 bits (62), Expect = 8.5
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Query: 234 EKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
+K E+ + + + + ERE +R +R+R +R++R ++ + L R
Sbjct: 151 KKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKR------KQFQDLGRK 204
Query: 294 RSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
D R R R + D + K
Sbjct: 205 MLEDPQERERRERRERMERETNGNEDEEGRQK 236
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 62.4 bits (150), Expect = 5e-10
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 234 EKQEKRNQDRLRRREERER----------EERLSRRSGSRTRDRRRSRSRDRRRRRSRST 283
+K+EKR R R R R R R RRS S++R RRRS+S RRR SR
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER 300
Query: 284 SRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSA 322
R R S++R + + + + RS++ + + A R RSA
Sbjct: 301 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSA 339
Score = 58.9 bits (141), Expect = 6e-09
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 217 GFIQIREKLDQLRKTVAE--KQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRD 274
G + K D K + E K+ + Q + E +++E R S SR+R RRR
Sbjct: 204 GLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSS 263
Query: 275 RRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
R RRSRS SR RR S+SRSR R + R R RSHSR R SR S
Sbjct: 264 SRHRRSRSRSR-RRSHSKSRSRRRSKSPR-RRRSHSRERGRRSRSTS 308
Score = 58.2 bits (139), Expect = 1e-08
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 29/133 (21%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR------------- 268
R + R++ ++ + +R RRR RE RS S+TRD++
Sbjct: 268 RSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPP 327
Query: 269 ---------RSRSRDRRRRRSRSTSRE-------RRKLSRSRSRDRHRRHRSRSRSHSRG 312
RS SR+RRRRRSRS +R +RKLSRS S RH++ + + + R
Sbjct: 328 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERS 387
Query: 313 HRRASRDRSAKYK 325
R S K K
Sbjct: 388 RDERERSTSKKKK 400
Score = 37.7 bits (86), Expect = 0.014
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 161 KVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQ 220
K R KKKE +E+ R+ P S+ + RR G +
Sbjct: 309 KTRDKKKEDKEKKRSKTPPKSYSTARRS--------RSASRERRRRRSRSGTRSPKKPRS 360
Query: 221 IREKLDQLRKTVAEKQEKR-NQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
+ KL + K+EK+ ++D+ R R+ERER ++S + +DR R D+
Sbjct: 361 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDK 416
Score = 37.7 bits (86), Expect = 0.014
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 229 RKTVAEKQEKRNQDRLRRR---EEREREERLSRRSGSRTRDRRRSRSRDRRRRR-SRSTS 284
R A ++ +R + R R + R + +LSR R + + + +D+ R R R S
Sbjct: 335 RSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERS 394
Query: 285 RERRKLSRSRSRDRHRRHRS 304
++K S+ + +DR R+ S
Sbjct: 395 TSKKKKSKDKEKDRERKSES 414
>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
sapiens]
Length = 482
Score = 62.0 bits (149), Expect = 7e-10
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 238 KRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS-R 296
KRN + R+ ++ R S SR R RSR R+R R R RS R R SRSRS R
Sbjct: 390 KRNGESERKSSRHRGKKSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRSRSRSRR 449
Query: 297 DRHRRHRSRSRSHSRGHRRA-SRDRSAK 323
R R +S SRS SRG RR+ +RDR+ +
Sbjct: 450 SRRSRSQSSSRSRSRGRRRSGNRDRTVQ 477
Score = 45.8 bits (107), Expect = 5e-05
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 26/108 (24%)
Query: 201 DNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRS 260
+++R+ + H G K H + RE+ + + RN+DR R R SR
Sbjct: 394 ESERKSSRHRGKKSHKRTSKSRERHNS-------RSRGRNRDRSRDR---------SRGR 437
Query: 261 GSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRS 308
GSR+ RSRSR RR RRSRS S SRSRSR R RR +R R+
Sbjct: 438 GSRS----RSRSRSRRSRRSRSQSS-----SRSRSRGR-RRSGNRDRT 475
Score = 28.9 bits (63), Expect = 6.5
Identities = 11/56 (19%), Positives = 32/56 (57%)
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
+I+++ ++ K E+QE++ +++ ++ +EREE +R + ++ + D+
Sbjct: 87 RIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKKEKEEALQKMLDQ 142
>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing A [Homo sapiens]
Length = 312
Score = 62.0 bits (149), Expect = 7e-10
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKL---RVCEVCSAYLGLHDNDRRLADHFGGKL 214
+ K++++ + E E M F + L RVC++ L +R +L
Sbjct: 126 DYRKIKSQNRNGEFEL---MHVDEFIDELLHSERVCDIILPRL-----QKRYVLEEAEQL 177
Query: 215 HLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREER-LSRRSGSRTRDRRRSRSR 273
+ E +D + + E++E +R+ + R R R L + S T RRSRSR
Sbjct: 178 EPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR 237
Query: 274 DRRRR------RSRSTSRERRKLS-----RSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
RRR RS S RER + RSRSRDR R RS+S H R HR S +S
Sbjct: 238 SPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKS 296
Score = 61.2 bits (147), Expect = 1e-09
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR-TRDRRRSRSRDRRRRRSRSTS 284
D R++ + + R LR R R R R RS R + RR R R + RR RS S
Sbjct: 211 DHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRS 270
Query: 285 RERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R+RR SRS+S HR HR RS S S + S +S +
Sbjct: 271 RDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRR 309
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 61.6 bits (148), Expect = 9e-10
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 12/222 (5%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILM 157
+RR L ++ E E+ + K ++ E E KL E+ E Q++
Sbjct: 453 ERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKL---EEEERREQQERREQQLRR 509
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E E+ R ++ + +EE +QQ R E L + ++RL +
Sbjct: 510 EQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQ---- 565
Query: 218 FIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRR 277
+++ + ++ R + +++E+R Q RL+R +E E+RL R R R R++R
Sbjct: 566 --RLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEER---REQRL 620
Query: 278 RRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRD 319
+R R++L +S ++ R+ + R R +R R+
Sbjct: 621 KREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKRE 662
Score = 54.7 bits (130), Expect = 1e-07
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 25/250 (10%)
Query: 91 ESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGA----- 145
E +AE + ++E ++ ++ E+ + ++ E E A+ EQL +
Sbjct: 145 ERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREER----RAEEEQLQSCKGHE 200
Query: 146 -EGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDR 204
E DE Q E+ ++R K +E +++ R FQ+++ + E L +
Sbjct: 201 TEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEK--EWRKRETVLRKEEE 258
Query: 205 RLADHFGGKLHLGFIQIREKLDQLRKTVAEK------QEKRNQDRLRRREE---REREER 255
+L + + +++E+ +QLRK ++ +E++ Q RLRR ++ ++ EER
Sbjct: 259 KLQEEEPQRQR----ELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEER 314
Query: 256 LSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRR 315
++ R + RR + +RR ++ R ERR+ R ++ RR + R R
Sbjct: 315 REQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERRE 374
Query: 316 ASRDRSAKYK 325
R + +
Sbjct: 375 QQLRREQQLR 384
Score = 54.7 bits (130), Expect = 1e-07
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 108 LAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKK 167
L + +E++ E + ++ E E++ KL + ++L E +E Q+ + E+ +K+
Sbjct: 253 LRKEEEKLQEEEPQRQRELQEEEEQLRKL--ERQELRRERQEEEQQQQRLRREQQLRRKQ 310
Query: 168 EAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQ 227
E E QQ++ R +RR + L Q + Q
Sbjct: 311 EEERRE---------QQEERR-----------EQQERREQQEERREQQLRREQEERREQQ 350
Query: 228 LRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRR----RRSRST 283
LR+ E++E+R + +LRR +E ER E+ RR R+++ R + RR RR +
Sbjct: 351 LRR---EQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQL 407
Query: 284 SRERR-KLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
RE++ + + R++ R H + H + R++ K
Sbjct: 408 RREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLK 448
Score = 53.9 bits (128), Expect = 2e-07
Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
R +L +++ ++++ E + E+ E +E+ K EQ E Q++ E
Sbjct: 403 REQQLRREQQLRREQQLRREQQLRREQEEERHEQ------KHEQERRE------QRLKRE 450
Query: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
E+ R K EE R+ Q ++ + E +L L + +RR
Sbjct: 451 QEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERR------------- 497
Query: 219 IQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR 278
E+ ++ + + +QE+R + RL+R+EE ER ++ R R++ R + +R
Sbjct: 498 ----EQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKRE 553
Query: 279 RSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
+ +ERR+ R + RR + R R +R R++ +
Sbjct: 554 EEKRLEQERRE-QRLKREQEERRDQLLKREEERRQQRLKREQEER 597
Score = 52.4 bits (124), Expect = 6e-07
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 102 ELAKKRLAETQEEISAEVSAKAEKVHE--LNEEIGKLLAKAEQLGAEGNVDESQKILMEV 159
E +++ E Q+ + E K + E L +E KL + Q E +E Q +E
Sbjct: 224 EEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLER 283
Query: 160 EKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI 219
+++R +++E E+ QQQ+LR + + +RR
Sbjct: 284 QELRRERQEEEQ-----------QQQRLRREQQLRRK---QEEERRE------------- 316
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDR--RRSRSRDRRR 277
Q E+ +Q + E+QE+R + +LRR +E RE++L R R++ RR + +RR
Sbjct: 317 QQEERREQQERR--EQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERRE 374
Query: 278 RRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
++ R + RR+ R + R + R R ++ R++ +
Sbjct: 375 QQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLR 420
Score = 50.1 bits (118), Expect = 3e-06
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
RR E +K L E Q+ + E+ + EE L + EQ + +K L E
Sbjct: 1440 RRQERERKFLEEEQQ-------LRQERHRKFREEEQLLQEREEQ--QLHRQERDRKFLEE 1490
Query: 159 VEKVRAKKKEA---EEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
+++R ++++ E+E R+ P F +++ + LH R+
Sbjct: 1491 EQQLRRQERDRKFREQELRSQEPERKFLEEEQQ----------LHRQQRQRK-------- 1532
Query: 216 LGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDR--RRSRSR 273
F+Q + QLR+ +Q ++++DR R EE+ R+ER ++ + RDR R +
Sbjct: 1533 --FLQEEQ---QLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKFRLEEQK 1587
Query: 274 DRRRRRSRSTSRERRKLSRSRSRDRHRRHRSR 305
RR+ + R + ++L R + + R+ R R
Sbjct: 1588 VRRQEQERKFMEDEQQLRRQEGQQQLRQERDR 1619
Score = 49.3 bits (116), Expect = 5e-06
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 13/224 (5%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILM 157
+RR + K++ E +E + + ++ + E E +LL + E+ E E Q++
Sbjct: 513 ERREQRLKRQ--EEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERRE-QRLKR 569
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E E+ R + + EEE R Q+++L L +RR +
Sbjct: 570 EQEERRDQLLKREEE-RRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPE-- 626
Query: 218 FIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRR 277
E+ QL K+ E+QE+R Q +LRR ++ RE+RL R ++R R + R
Sbjct: 627 ----EERRQQLLKS--EEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEER 680
Query: 278 RRSRSTSRERRKL-SRSRSRDRHRRHRSRSRSHSRGHRRASRDR 320
R E+ + R +SR + + S + +R + SR R
Sbjct: 681 REQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPR 724
Score = 48.9 bits (115), Expect = 6e-06
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 42/240 (17%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
R E +++L + +EE E + +++ EE L K E+ + + Q+ +E
Sbjct: 540 REQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLE 599
Query: 159 -------VEKV--------RAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDND 203
VE++ R K++E EEE R + S Q+++ + L +
Sbjct: 600 QRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQ------QQLRREQQE 653
Query: 204 RRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRR---- 259
RR + L + E+L+Q K E +E+R + L E+ + ER+ R
Sbjct: 654 RR-------EQRLKREEEEERLEQRLKR--EHEEERREQELAEEEQEQARERIKSRIPKW 704
Query: 260 --------SGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSR 311
+++ R R ++ +RRR + RR+ S + ++ R HR + R
Sbjct: 705 QWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQR 764
Score = 48.1 bits (113), Expect = 1e-05
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 26/262 (9%)
Query: 76 KERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGK 135
++RD F + E + R+ K RL E + + E +L + G+
Sbjct: 1551 QDRDRKFREEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQ 1610
Query: 136 LLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSA 195
+ E+ + E +++L E E+ + ++E + ++ P Q+++ ++
Sbjct: 1611 QQLRQER---DRKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQL------ 1661
Query: 196 YLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLR---------R 246
HD DR+ + L G Q + ++ RK E+Q+ R Q+R R R
Sbjct: 1662 ---RHDRDRKFREE-EQLLQEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLR 1717
Query: 247 REERE---REERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHR 303
R+E E REE R+ + + RR+ R R RE ++L R + RDR R
Sbjct: 1718 RQELERKFREEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQL-RRQERDRKFREE 1776
Query: 304 SRSRSHSRGHRRASRDRSAKYK 325
+ R + S++ K++
Sbjct: 1777 EQLRQEREEQQLRSQESDRKFR 1798
Score = 46.2 bits (108), Expect = 4e-05
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKVHELNEE--IGKLLAKAEQLGAEGNVDESQKILM 157
R E K+RL E + + E + E+ L EE + Q E + + ++ L+
Sbjct: 1035 REEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLL 1094
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E + +++E E + R ++Q LR + ++R + +
Sbjct: 1095 REEPEKRRRQERERQCREEEELQQEEEQLLR-----------EEREKRRRQELE-RQYRE 1142
Query: 218 FIQIREKLDQLRKTVAEKQEKRNQDRLRRREE--REREERLSRRSGSRTRDRRRSRSRDR 275
+++++ +QL + EK+ ++ +R R EE ++ EE+L R +R + R+R
Sbjct: 1143 EEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLRE-----EQEKRRQERER 1197
Query: 276 RRRRSRSTSRERRKLSRSRSRDRHRR 301
+ R R++RK R RD +R
Sbjct: 1198 QYREEEELQRQKRK---QRYRDEDQR 1220
Score = 46.2 bits (108), Expect = 4e-05
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEV 159
R E K+R E + + E + E+ L EE K + E+ E E+
Sbjct: 1155 REEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEE---------EL 1205
Query: 160 EKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDND--RRLADHFGGKLHLG 217
++ + K++ +E+ R+ + ++ +K Y +N+ R+L D
Sbjct: 1206 QRQKRKQRYRDEDQRSDLKWQ-WEPEKENAVRDNKVYCKGRENEQFRQLEDS-------- 1256
Query: 218 FIQIREKLDQ--LRKTVAEKQEKRNQDRLRRREERER----EERLSRRSGSRTRDRRRSR 271
Q+R++ Q L+ + E+QE+ + RR ++R+R EE+L R +++ ++
Sbjct: 1257 --QLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQLER------EEQKEAK 1308
Query: 272 SRDRRRRRSRSTSRERRKLSRSRSR-DRHRRHRSR--SRSHSRGHRRASRDR 320
RDR+ + + RE R+ R R DR R + + RR RDR
Sbjct: 1309 RRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDR 1360
Score = 45.8 bits (107), Expect = 5e-05
Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 31/234 (13%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGK--LLAKAEQLGAEGNVDESQKILM 157
R E K+R E + + + + E+ L EE K L + Q E + + ++ L+
Sbjct: 1005 REEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLL 1064
Query: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E+ +++E E +YR ++Q LR + ++R
Sbjct: 1065 GEERETRRRQELERQYRKEEELQQEEEQLLR-----------EEPEKRRR---------- 1103
Query: 218 FIQIREKLDQLRKTVAEKQEK--RNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
Q RE+ + + + +++E+ R + RRR+E ER+ R R R
Sbjct: 1104 --QERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKR 1161
Query: 276 RRRRSRSTSRERRKLSRSRSR----DRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
RR+ RE +L + + ++ +R + R R + + R +Y+
Sbjct: 1162 RRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYR 1215
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
RR E +K L E Q+ E+ K + +L +E + EQL + E + ++E
Sbjct: 1701 RRQERERKFLQEEQQLRRQELERKFREEEQLRQE-----TEQEQLRRQ----ERYRKILE 1751
Query: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
E++R +++E ++ R F++++ E L ++DR+ + +
Sbjct: 1752 EEQLRPEREE--QQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQEREE 1809
Query: 219 IQIREKL---------DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRR 269
Q+R + +QL+ E++ ++ +DR R EE+ + SRR
Sbjct: 1810 QQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEE 1869
Query: 270 SRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRR 315
+ R R R+ R R++ + RHR+ +GH R
Sbjct: 1870 QKRRQERERKLREEHIRRQQ----KEEQRHRQVGEIKSQEGKGHGR 1911
Score = 43.9 bits (102), Expect = 2e-04
Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 46/228 (20%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQ---LGAEGNVDESQKI 155
R T AK L QE++ E E+ EL E + + EQ E + + ++
Sbjct: 886 RHTLYAKPAL---QEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQ 942
Query: 156 LMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
L+ E+ + +++E E +YR ++Q L
Sbjct: 943 LLREEREKRRRQERERQYRKDKKLQQKEEQLLG--------------------------- 975
Query: 216 LGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
E+ ++ R+ EK+ + ++ + E+ REER RR R R+ R +D
Sbjct: 976 -------EEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRR---RQEWERQYRKKDE 1025
Query: 276 RRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSR---GHRRASRDR 320
++ RE R+ R + R+R R + G R +R R
Sbjct: 1026 LQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRR 1073
Score = 43.9 bits (102), Expect = 2e-04
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 35/264 (13%)
Query: 68 RADYEIASKERDLFFELDAMDHLES---FIAECDR--RTELAKKRLAETQEEISAEVSAK 122
R + + +ERD F + + H E F+ E R R E +K L E Q+
Sbjct: 1348 REEQPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQ------LRC 1401
Query: 123 AEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSF 182
E+ +L ++ + + EQ + D +K E ++VR ++E E ++
Sbjct: 1402 QEREQQLRQDRDRKFREEEQQLSRQERD--RKFREEEQQVR--RQERERKFLE------- 1450
Query: 183 QQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQD 242
++Q+LR + + ++ L + +LH R++ D RK + E+Q+ R Q+
Sbjct: 1451 EEQQLRQ----ERHRKFREEEQLLQEREEQQLH------RQERD--RKFLEEEQQLRRQE 1498
Query: 243 RLRR-REEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRR 301
R R+ RE+ R + R+ + R + + + + + R+ R R + RDR R
Sbjct: 1499 RDRKFREQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFR 1558
Query: 302 HRSRSRSHSRGHRRASRDRSAKYK 325
+ R + + ++R K++
Sbjct: 1559 EEEQLRQEREEQQLSRQERDRKFR 1582
Score = 43.5 bits (101), Expect = 3e-04
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 139 KAEQLGAEGNVDESQKILMEVEKV---RAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSA 195
+ QL AE Q+ L E E+ R +++E E+E + Q+++ R ++
Sbjct: 794 RERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRE-RAQQLQEE 852
Query: 196 YLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEK----QEKRNQDRLRRREERE 251
GL ++ R + Q+ E+ + R T+ K ++ R + +L + EE E
Sbjct: 853 EDGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEE 912
Query: 252 --REERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSH 309
REER RR R R+ R ++ ++ RE R+ R + R+R R + +
Sbjct: 913 LQREEREKRR---RQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQK 969
Query: 310 ------SRGHRRASRDRSAKYK 325
+R ++R KY+
Sbjct: 970 EEQLLGEEPEKRRRQEREKKYR 991
Score = 43.5 bits (101), Expect = 3e-04
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 102 ELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKA--EQLGAEGNVDESQKILMEV 159
E K+R E +++ E + E+ L EE K + Q + + + ++ L+
Sbjct: 977 EPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLRE 1036
Query: 160 EKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI 219
E+ + + +E E +YR ++Q LG RR + + +
Sbjct: 1037 EREKRRLQERERQYREEEELQQEEEQ----------LLGEERETRRRQEL--ERQYRKEE 1084
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRR 279
+++++ +QL + EK +R Q+R R+ E E ++ + R++RR + +R+ R
Sbjct: 1085 ELQQEEEQLLREEPEK--RRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYRE 1142
Query: 280 SRSTSRERRKLSRSRSRDRHRRHRSR 305
+E +L R R R+ R
Sbjct: 1143 EEEVQQEEEQLLREEPEKRRRQELER 1168
Score = 43.5 bits (101), Expect = 3e-04
Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 49/253 (19%)
Query: 99 RRTELAKKRLAETQEEISAEVSAKAEKVHELN----EEIGKLLAKAEQLGAEGNVDESQK 154
R+ E ++ R ++Q+++ + + E+ E ++ + + EQL E + ++
Sbjct: 1251 RQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRR 1310
Query: 155 ILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKL 214
E+ + ++E EE+ R F++++ + E L + DR+ +
Sbjct: 1311 DRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFREE----- 1365
Query: 215 HLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREE-------------REREERLSRRSG 261
++R + +Q RK + E+Q RLRR+E +ERE++L +
Sbjct: 1366 -----ELRHQ-EQGRKFLEEEQ------RLRRQERERKFLKEEQQLRCQEREQQLRQDRD 1413
Query: 262 SRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS---------RDRHRRHRS-----RSR 307
+ R+ + SR R R+ R ++ R+ R R ++RHR+ R + R
Sbjct: 1414 RKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFREEEQLLQER 1473
Query: 308 SHSRGHRRASRDR 320
+ HR+ RDR
Sbjct: 1474 EEQQLHRQ-ERDR 1485
Score = 42.7 bits (99), Expect = 4e-04
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 10/240 (4%)
Query: 69 ADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHE 128
A+ E S++++ + D E + E ++R E Q + S K + E
Sbjct: 149 AEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQ-----SCKGHETEE 203
Query: 129 LNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLR 188
+E + +L +G ++ Q+ + R ++E E+E+R +++KL+
Sbjct: 204 FPDEEQLRRRELLELRRKGREEKQQQ--RRERQDRVFQEEEEKEWRKRETVLRKEEEKLQ 261
Query: 189 VCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRRE 248
E L + + +L +L + ++ +LR+ + + K+ ++R ++E
Sbjct: 262 E-EEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRRE-QQLRRKQEEERREQQE 319
Query: 249 E-REREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSR 307
E RE++ER ++ R + RR + R ++ R ERR+ R ++ RR + R
Sbjct: 320 ERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRR 379
Score = 42.7 bits (99), Expect = 4e-04
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 19/234 (8%)
Query: 100 RTELAKKRLAETQEEISAEVSAK-AEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
R E +K L E Q+ E K E+ E K L + +QL + +K L E
Sbjct: 1480 RQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLEEEQQLHRQ---QRQRKFLQE 1536
Query: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLA-DHFGGKLHLG 217
+++R ++E ++ R ++++LR E L + DR+ + +
Sbjct: 1537 EQQLR--RQERGQQRRQDRDRKFREEEQLRQ-EREEQQLSRQERDRKFRLEEQKVRRQEQ 1593
Query: 218 FIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRD----------R 267
+ E QLR+ ++Q ++ +DR R +E+ +ER ++ + RD R
Sbjct: 1594 ERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLR 1653
Query: 268 RRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRS-RSHSRGHRRASRDR 320
R+ R + R R R E + L + R+ R R R + RR R+R
Sbjct: 1654 RQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRKFREEEQQLRRQERER 1707
Score = 41.2 bits (95), Expect = 0.001
Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 96 ECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLA-----KAEQLGAEGNVD 150
E +RR + R +E++ E +A++ ++E +LL K + +
Sbjct: 1280 EQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFR 1339
Query: 151 ESQKILMEVEKVRAKKKEA-----EEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRR 205
E +++L E E+ +++E EEE R+ F +++ R L + +R+
Sbjct: 1340 EEEQLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEEQR--------LRRQERERK 1391
Query: 206 LADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTR 265
+L + + + D+ RK E+Q+ Q+R R+ E E++ R R
Sbjct: 1392 FLKE-EQQLRCQEREQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLE 1450
Query: 266 DRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRS-RSHSRGHRRASRDR 320
+ ++ R+ R R E + L + HR+ R R + RR RDR
Sbjct: 1451 EEQQ-----LRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQERDR 1501
Score = 40.8 bits (94), Expect = 0.002
Identities = 47/233 (20%), Positives = 84/233 (36%), Gaps = 30/233 (12%)
Query: 98 DRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAE-QLGAEGNVDESQKIL 156
+ E ++RL EE E E+ + E I + K + QL +E + +S K+
Sbjct: 662 EEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQS-KVY 720
Query: 157 MEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHL 216
K +++ E+E + S Q Q+ + H
Sbjct: 721 SRPRKQEGQRRRQEQEEKRRRRESELQWQEEE------------------------RAHR 756
Query: 217 GFIQIREKLDQLRKTVAEKQEKRNQDRLRRR----EEREREERLSRRSGSRTRDRRRSRS 272
+ ++ D + AE++ +R + RL R E+RER+ R R R
Sbjct: 757 QQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEE 816
Query: 273 RDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
+++RRR+ R +E + L R R + R RS + +
Sbjct: 817 KEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQR 869
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 225 LDQLRKTVAEKQEKRNQDRLRRREERE---REERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
LD+ ++ + +E QDR + ++R R+ +L G R R +R+ + R+ +
Sbjct: 95 LDEEKRARCDGKESLLQDRRQEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQ 154
Query: 282 STSRERRKLSRSRSRDRHRRH----RSRSRSHSRGHRRASRDR 320
S +ER + RDR RR R R R RRA ++
Sbjct: 155 SEKQERLE-----QRDRQRRDEELWRQRQEWQEREERRAEEEQ 192
Score = 39.3 bits (90), Expect = 0.005
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
+E+ LR+ EK+ ++ DR R EE+ +ER + + RDR+ R + + R
Sbjct: 1315 QEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFREEELRHQEQGR 1374
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
E ++L R + + + R R ++ +DR K++
Sbjct: 1375 KFLEEEQRLRRQERERKFLKEEQQLRCQER-EQQLRQDRDRKFR 1417
Score = 38.5 bits (88), Expect = 0.008
Identities = 21/106 (19%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRS 280
++E+ ++L++ EK+ ++ Q+R R EE+ ++E R + RR+ R R R+ +
Sbjct: 906 LQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKK 965
Query: 281 RSTSRER---RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
E+ + + R ++R +++R + +R +
Sbjct: 966 LQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKR 1011
Score = 37.7 bits (86), Expect = 0.014
Identities = 51/262 (19%), Positives = 102/262 (38%), Gaps = 58/262 (22%)
Query: 96 ECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKI 155
E ++R ++R E Q E + E+ +L EE E + E Q+
Sbjct: 816 EKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEE-------------EDGLQEDQER 862
Query: 156 LMEVEKVRAKK-----KEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHF 210
E+ R +K +E + R+++ A Q++LR +++L
Sbjct: 863 RRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLR-------------KEQQLLQEE 909
Query: 211 GGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRL-------RRREEREREERLSRRSGSR 263
+L + R + +Q R+ E+Q ++ +++L RRR+ERER+ R ++ +
Sbjct: 910 EEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQK 969
Query: 264 TR-------DRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRS-------- 308
++RR + R+++ R +E +L R R R+ R
Sbjct: 970 EEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQE 1029
Query: 309 -----HSRGHRRASRDRSAKYK 325
+R ++R +Y+
Sbjct: 1030 EEQLLREEREKRRLQERERQYR 1051
Score = 37.7 bits (86), Expect = 0.014
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 70 DYEIASKERDLFF-----ELDAMDHLESFIAECD--RRTELAKKRLAETQ--EEISAEVS 120
+ ++ +ERD F +L + F+ E RR EL +K E Q +E E
Sbjct: 1681 EQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQL 1740
Query: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVD----ESQKILMEVEKVRAKKKEAEEEYRNS 176
+ E+ ++ EE + EQ D E +++ E E+ + + +E++ ++R
Sbjct: 1741 RRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREE 1800
Query: 177 MPA-SSFQQQKLRVCEVCSAY------LGLHDNDRRLADHFGGKLHLGFIQIREKLDQLR 229
++Q+LR + Y L L + ++RL + + E+
Sbjct: 1801 EQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQY-----RAEEQFATQE 1855
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRK 289
K+ E+QE ++ +RR+ERER+ R RR+ + R R+ S+E +
Sbjct: 1856 KSRREEQELWQEEEQKRRQERERKLR-------EEHIRRQQKEEQRHRQVGEIKSQEGKG 1908
Query: 290 LSRSRSRDRHR 300
R H+
Sbjct: 1909 HGRLLEPGTHQ 1919
Score = 35.4 bits (80), Expect = 0.070
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 222 REKLDQLRKTVAEKQEK-RNQDRLRRREEREREERLSR-RSGSRTRDRRRSRSRDRRRRR 279
R+K + + +AE +E+ Q+RL +R+ + R+E L R R + R+ RR+ + +
Sbjct: 138 RQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCK 197
Query: 280 SRSTSR-------ERRKLSRSRSRDRHRRHRSRSRSHSR 311
T RR+L R + R + + R R
Sbjct: 198 GHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDR 236
Score = 32.3 bits (72), Expect = 0.59
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 198 GLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLS 257
GL + R D GK L +Q R + + R+ ++ + RRR++R+ +ER
Sbjct: 94 GLDEEKRARCD---GKESL--LQDRRQEEDQRRFEPRDRQLEEEPGQRRRQKRQEQEREL 148
Query: 258 RRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSH 309
++ + R RD R+RR R+R++ R + H
Sbjct: 149 AEGEEQSEKQERLEQRD-RQRRDEELWRQRQEWQEREERRAEEEQLQSCKGH 199
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 61.6 bits (148), Expect = 9e-10
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 241 QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR 300
QD + + ++++ RS SRT R RSRS +RR RSRS SR+R+ RSRSR R R
Sbjct: 379 QDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRER 438
Query: 301 RHRSRSRSHSRGHRRASRDRSAKYK 325
+ +S SRS+S R R++ + K
Sbjct: 439 KRKS-SRSYSSERRAREREKERQKK 462
Score = 58.2 bits (139), Expect = 1e-08
Identities = 72/269 (26%), Positives = 108/269 (40%), Gaps = 30/269 (11%)
Query: 50 AGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLA 109
AG + L T A A + E+ + F MD + E +E KK +
Sbjct: 227 AGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFD--FGEDSEHSEEPKKEIP 284
Query: 110 ETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEA 169
+Q +E S H++ AEQL + Q++L + + +A +++
Sbjct: 285 ASQLSHVSE-SVNNSIFHQI----------AEQLQQQNLEHLRQQLLEQQQPQKATPQDS 333
Query: 170 EE-----EYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREK 224
+E E+ S S QQ L + + D + + G E
Sbjct: 334 QEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEE-------EV 386
Query: 225 LDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRR---RSRSRDRRRRRSR 281
+Q K VA + R R R R R+R R RSGSR R R RSRSR+R+R+ SR
Sbjct: 387 FEQEAKKVAVRSRSRTHSRSRSRSPRKRRSR--SRSGSRKRKHRKRSRSRSRERKRKSSR 444
Query: 282 STSRERRKLSRSRSRDRHRRHRSRSRSHS 310
S S ERR R + R + RS++ S
Sbjct: 445 SYSSERRAREREKERQKKGLPPIRSKTLS 473
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 61.2 bits (147), Expect = 1e-09
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 26/169 (15%)
Query: 160 EKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI 219
EK KK++A+EE + F++ K C +L L D+
Sbjct: 1193 EKKSEKKEKAQEEPPAKLLDDLFRKTK---AAPCIYWLPLTDS----------------- 1232
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRR 279
QI +K + + E++++R + ++ERE+E R+ R++RR SR+R R R
Sbjct: 1233 QIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAE-RERNRQLEREKRREHSRERDRER 1291
Query: 280 SRSTSRERRKLSRSRSRDRHR---RHRSRSRSHSRGHRRAS--RDRSAK 323
R R+R R R RDR R R R ++ HSR R++ RDR +
Sbjct: 1292 ERERERDRGDRDRDRERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGR 1340
Score = 48.9 bits (115), Expect = 6e-06
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 222 REK-LDQLRKTVAEKQEKRNQDRLRRRE-EREREERLSRRSGSRTRDRRRSRSRDRRRRR 279
REK ++ R E++++R R R RE ERERE R R RDR R R RDRR +
Sbjct: 1263 REKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDTK 1322
Query: 280 SRSTSRERRKLSRSRSRDR 298
S SR R R R R
Sbjct: 1323 RHSRSRSRSTPVRDRGGRR 1341
Score = 47.4 bits (111), Expect = 2e-05
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 223 EKLDQLRKTVAEKQEKRNQDRLRRRE-------EREREERLSRRSGSRTRDRRRSRSRDR 275
E+ + R+ AE++ R +R +RRE ERERE R R R+R R R R+R
Sbjct: 1257 EEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRER 1316
Query: 276 RRRRSRSTSRERRKLSRSRSRDRHR 300
RR ++ SR R + + R R R
Sbjct: 1317 DRRDTKRHSRSRSRSTPVRDRGGRR 1341
Score = 43.5 bits (101), Expect = 3e-04
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 235 KQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
+ E+R Q+R R + ERE + RR +R+ R RD+ R RS RSR
Sbjct: 1132 RAEQREQERAVREQWAEREREMERRERTRSE---REWDRDKVREGPRS---------RSR 1179
Query: 295 SRDRHRRHRSRSR-SHSRGHRRASRDRSAK 323
SRDR R+ R++S+ S +A + AK
Sbjct: 1180 SRDRRRKERAKSKEKKSEKKEKAQEEPPAK 1209
Score = 42.4 bits (98), Expect = 6e-04
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 260 SGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRA--- 316
SGSR+ RS+ RD + R+ + R R K+ + + R RSRSRS S R++
Sbjct: 599 SGSRSHSPLRSKQRDVAQARTHANPRGRPKMGSRSTSESRSRSRSRSRSASSNSRKSLSP 658
Query: 317 --SRDRSAKY 324
SRD S Y
Sbjct: 659 GVSRDSSTSY 668
Score = 42.0 bits (97), Expect = 7e-04
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 224 KLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRST 283
+ +Q + A +++ ++R R ER R ER R R R RSRSRD RRR+ R+
Sbjct: 1132 RAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRD-RRRKERAK 1190
Query: 284 SRERRKLSRSRSRD 297
S+E++ + ++++
Sbjct: 1191 SKEKKSEKKEKAQE 1204
Score = 37.4 bits (85), Expect = 0.018
Identities = 39/155 (25%), Positives = 48/155 (30%), Gaps = 65/155 (41%)
Query: 229 RKTVAEKQEKRNQDRLRRREER-------------------------------------- 250
R V E R++ R RRR+ER
Sbjct: 1167 RDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYW 1226
Query: 251 -------------EREERLSRRSGSRTR-------------DRRRSRSRDRRRRRSRSTS 284
ER ER R R +R R+R +R +RR S
Sbjct: 1227 LPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRE 1286
Query: 285 RERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRD 319
R+R + R R RDR R R R R RG R RD
Sbjct: 1287 RDRER-ERERERDRGDRDRDRERDRERGRERDRRD 1320
Score = 33.5 bits (75), Expect = 0.26
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 222 REKLDQLRKTVAEKQ-EKRNQDRLRRREEREREE-RLSRRSGSRTRDRRRSRSRDRRRRR 279
RE+ +R+ AE++ E ++R R E +R++ R RS SR+RDRRR + ++
Sbjct: 1136 REQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKK 1195
Query: 280 SRSTSRERRK 289
S + + +
Sbjct: 1196 SEKKEKAQEE 1205
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 61.2 bits (147), Expect = 1e-09
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 226 DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSR 285
D++RKT + RNQ+ + R++ RS SR+R + ++SR R R S S SR
Sbjct: 1279 DEVRKTARLNRRPRNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSR 1338
Query: 286 ER----------RKLSRSRSRDRHRRHRSRSRSHS----RGHRRASRDRS 321
R R SRSRSR + R R+RSRS S + HR +SR RS
Sbjct: 1339 SRSRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRTSSRSRS 1388
Score = 43.9 bits (102), Expect = 2e-04
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 215 HLGFIQIREKLDQLRKTVAE----KQEKRNQ-DRLRRREEREREERLSRRSGSRT-RDRR 268
HL IQ L +++T + K+EK ++ D+ + +R S RS SR+ R R
Sbjct: 642 HLLPIQSTYSLANIKETGSSSSYHKREKNSESDQSTYSKYSDRSSESSPRSRSRSSRSRS 701
Query: 269 RSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
SRS R R + S SR R SRS SR+++ H SRS S + R AK
Sbjct: 702 YSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISSDDGRRAK 756
Score = 38.9 bits (89), Expect = 0.006
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 239 RNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRR---------RRRSRSTSRERRK 289
R++ R R R SR G +R R RSRS R R RSRS+S +
Sbjct: 1338 RSRSRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHS 1397
Query: 290 LSRSRSRDRH---RRHRSRSRSHSRGHRRASRDRSAK 323
SRS + D + R RSRS+ HR S +R ++
Sbjct: 1398 RSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRSR 1434
Score = 37.7 bits (86), Expect = 0.014
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 235 KQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRS------------RDRRRRRSRS 282
+ K + R++ +RER R S S + R S+S RD R +S S
Sbjct: 466 ESSKSSTRRMKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHS 525
Query: 283 TSRERRKLSRSRSRDR---HRRHRSRSRSHSR-GHR-RASR 318
S R SRSR+ + H R RS+SRS S+ GHR RAS+
Sbjct: 526 QSYSRGS-SRSRTASKSSSHSRSRSKSRSSSKSGHRKRASK 565
Score = 37.7 bits (86), Expect = 0.014
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 17/97 (17%)
Query: 239 RNQDRLRRREERE-REERLSRRSGSRT-----RDRRRSRSRDRRRRRSRSTSRERRKLSR 292
R + R R R + R S RS SR+ R RS + D RSRS SR +R S
Sbjct: 1364 RGRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRSRSYTYDSYYSRSRSRSRSQRSDSY 1423
Query: 293 SRSRDRHRRHRS-----------RSRSHSRGHRRASR 318
R R +RR RS RS SH R +SR
Sbjct: 1424 HRGRSYNRRSRSCRSYGSDSESDRSYSHHRSPSESSR 1460
Score = 35.8 bits (81), Expect = 0.053
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 28/182 (15%)
Query: 158 EVEKVRAKKKEAEEEYRN----SMPASS-FQQQKLRVCEVCSAYLGLHDNDRRLADHFGG 212
E++++RA + + E++ S P SS + ++ L +Y G + +D A H G
Sbjct: 368 EMQRLRAYRPPSGEKWSKGDKLSDPCSSRWDERSLSQRSRSWSYNGYY-SDLSTARHSG- 425
Query: 213 KLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLS----RRSGSRTRDRR 268
K + K V K++ + Q RR ++ ++ L S S TR +
Sbjct: 426 ---------HHKKRRKEKKVKHKKKGKKQKHCRRHKQTKKRRILIPSDIESSKSSTRRMK 476
Query: 269 RSRSRDRRRRRSRSTSRERRKLSRSRSRD-------RHRRHRSRSRSHSRGHRR-ASRDR 320
S R+R R S +S K S+S R RS+SHS+ + R +SR R
Sbjct: 477 SSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHSQSYSRGSSRSR 536
Query: 321 SA 322
+A
Sbjct: 537 TA 538
Score = 35.8 bits (81), Expect = 0.053
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 255 RLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRS 306
R S RS S ++ R SR R +S S SR R K SRS S+ HR+ S+S
Sbjct: 516 RDSYRSKSHSQSYSRGSSRSRTASKSSSHSRSRSK-SRSSSKSGHRKRASKS 566
Score = 34.3 bits (77), Expect = 0.16
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 259 RSGSRTRDRRRSRSRDRRRRRSRSTSRER----------RKLSRSRSRDRHR-RHRSRSR 307
R GS + R++ +RR R S+S E+ R SRSRS+ + RHR+RS
Sbjct: 1273 RPGSLFDEVRKTARLNRRPRNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSV 1332
Query: 308 SHSRGHRRASRDRSAKYK 325
S+S R SR ++ Y+
Sbjct: 1333 SYSHSRSR-SRSSTSSYR 1349
Score = 33.9 bits (76), Expect = 0.20
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 231 TVAEKQEKRNQDRLRRREEREREER--LSRRSGSRTRDRRRSRSRDRRRRR-SRSTSRER 287
++A +E + +RE+ ++ S+ S + RSRSR R R SRS +R R
Sbjct: 651 SLANIKETGSSSSYHKREKNSESDQSTYSKYSDRSSESSPRSRSRSSRSRSYSRSYTRSR 710
Query: 288 RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKY 324
S + S R R SRS S ++ + RS+ Y
Sbjct: 711 ---SLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSY 744
Score = 33.5 bits (75), Expect = 0.26
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 240 NQDRLRRREEREREERLSRRSGSRTRDRR-----RSRSRDRRRRRSRSTSRERRKLSRSR 294
++ R R R R + S R+ SR+R R SRSR S SR R + RS
Sbjct: 1363 SRGRTRSRSSSYRSYK-SHRTSSRSRSRSSSYDPHSRSRSYTYDSYYSRSRSRSRSQRSD 1421
Query: 295 SRDRHRRHRSRSRSHSRGHRRASRDRS 321
S R R + RSRS + DRS
Sbjct: 1422 SYHRGRSYNRRSRSCRSYGSDSESDRS 1448
Score = 30.4 bits (67), Expect = 2.2
Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRS 280
I++ ++ RK + + E E L +R R R RR +
Sbjct: 181 IKDVFEKKRKKPTHSEGSDSSSNSSSSSESSSESELEH-------ERSRRRKHKRRPKVK 233
Query: 281 RSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
RS R + S R++H + S + + S D SAK
Sbjct: 234 RSKKRRKEASSSEEPRNKHAMNPKGHSERSDTNEKRSVDSSAK 276
Score = 29.6 bits (65), Expect = 3.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 230 KTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRK 289
K V ++D R + + R S RS + ++ SRSR + R S+S R+R
Sbjct: 505 KDVQSSLTHSSRDSYRSKSHSQSYSRGSSRSRTASKSSSHSRSRSKSRSSSKSGHRKRAS 564
Query: 290 LS 291
S
Sbjct: 565 KS 566
Score = 28.9 bits (63), Expect = 6.5
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRR- 278
Q +EK Q+ +T KQEK N+ + + ERE R D R+ S+ +R+
Sbjct: 823 QEKEKQGQMERT-HNKQEK-NRGEEKSKSERECPHSKKRTLKENLSDHLRNGSKPKRKNY 880
Query: 279 ---RSRSTSRERRKLSRSRSRDRH 299
+ S S R ++++ D H
Sbjct: 881 AGSKWDSESNSERDVTKNSKNDSH 904
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 60.8 bits (146), Expect = 2e-09
Identities = 45/105 (42%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 227 QLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRT----------RDRRRSRSRDRR 276
++R + QEKRN R R + R S RS SR+ R R SRS R
Sbjct: 720 KMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRS 779
Query: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
R RSRS SR R SRS+S RSRS+S+S G RR SR RS
Sbjct: 780 RSRSRSRSRSSRSRSRSQS-------RSRSKSYSPGRRRRSRSRS 817
Score = 52.8 bits (125), Expect = 4e-07
Identities = 41/89 (46%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 239 RNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRR--RRSRSTSRER-RKLSRSRS 295
R + R RRR+ +E+ RS SR++ R RS SR R + S S SR R R SRS S
Sbjct: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
Query: 296 RDRHRRHRSRSRSHSRGHRRASRDRSAKY 324
R R R RSRSRS R SR RS Y
Sbjct: 778 RSRSRS-RSRSRSSRSRSRSQSRSRSKSY 805
Score = 35.4 bits (80), Expect = 0.070
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 22/95 (23%)
Query: 249 EREREERLSRRSGSRTRDRRRSRSRDRR----------RRRSRSTSRER---------RK 289
+R R ++G R + R+R R+ R RSRS SR R K
Sbjct: 700 DRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSK 759
Query: 290 LSRSRSRDRHR---RHRSRSRSHSRGHRRASRDRS 321
S S SR R R R SRSRS SR R+SR RS
Sbjct: 760 SSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRS 794
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 60.5 bits (145), Expect = 2e-09
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 154 KILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
++++E R ++ ++ R + + K R E ++ D R L G +
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 214 LHLGFIQ-IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERL--SRRSGSRTRDRRRS 270
++ I+ + +K R+ + ++ R R R R+ R S+ S S++R R RS
Sbjct: 165 VNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRS 224
Query: 271 RSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
SR R + RSRS SR R K +SRS + +SRSRSHS G R+ A+ K
Sbjct: 225 GSRSRSKSRSRSQSRSRSKKEKSRSPS---KEKSRSRSHSAGKSRSKSKDQAEEK 276
Score = 59.7 bits (143), Expect = 3e-09
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 227 QLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRE 286
Q R+ EK+ ++ R + + R+ R + GSR+R R RS+S+D+R+ R RS
Sbjct: 305 QERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRS---- 360
Query: 287 RRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
R+ SRSRSR R + RSR R R + S + K
Sbjct: 361 -REESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKK 396
Score = 58.2 bits (139), Expect = 1e-08
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 219 IQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDR--RRSRSRDRR 276
IQ + + + + + + +++ R R +E R EE+ S R++++ R+SRSR R
Sbjct: 277 IQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRS 336
Query: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
+ SRS SR R K R + R SRSRS SR SR R +K
Sbjct: 337 KGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSK 383
Score = 58.2 bits (139), Expect = 1e-08
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 230 KTVAEKQEKRNQDRLRRREERER-EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERR 288
K+ + QE+R ++ R R R +E+ R+S SR+R + SRSR R R +S+ R+ R
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD-KRKGR 357
Query: 289 KLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYK 325
K SR SR R R RS RG +R S+ S+K K
Sbjct: 358 KRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKK 394
Score = 52.0 bits (123), Expect = 7e-07
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 30/254 (11%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKVHELN-EEIGKLLAKAEQLGAEGNVDESQKILME 158
R+ K++ +E S S A K + ++ + + + +G + S+
Sbjct: 239 RSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKS 298
Query: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLG---------LHDNDRRLADH 209
+ R++++ EEE R S+ Q++ LR S G D+R
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRK 358
Query: 210 FGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREE-RLSRRSGSRTRDRR 268
+ + R K ++ RK +++ K + +++E+ +R + R RS S+ R+
Sbjct: 359 RSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHA 418
Query: 269 RSRSRDRR--------------RRRSRSTSRERRKL---SRSRSRDRHRRHRSRSRSHSR 311
+S S R R RSRS S+ + L SRSRS+ + RSRS+S SR
Sbjct: 419 KSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKT-RSRSKSRSR 477
Query: 312 GHRRA-SRDRSAKY 324
R+ SR RS +
Sbjct: 478 SASRSPSRSRSRSH 491
Score = 48.5 bits (114), Expect = 8e-06
Identities = 44/224 (19%), Positives = 91/224 (40%), Gaps = 19/224 (8%)
Query: 100 RTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEV 159
R+ + ++++ + +K EK ++E + + + + D++++ +
Sbjct: 221 RSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNN 280
Query: 160 EKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI 219
+ V K + +++ + S Q+ RR+ + G + G
Sbjct: 281 DNVGKPKSRSPSRHKSKSKSRSRSQE------------------RRVEEEKRGSVSRGRS 322
Query: 220 QIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRR 279
Q + L Q R K R++ R R + + +R+ R R SR+R R RS+S R+R
Sbjct: 323 Q-EKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRG 381
Query: 280 SRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
S+ S+ + + + RS SRS S+ A + S +
Sbjct: 382 SKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQR 425
Score = 35.0 bits (79), Expect = 0.091
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 30/116 (25%)
Query: 229 RKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTR--------DRRRS---RSRDRRR 277
R + ++++ R + + R RSGSR+R R RS +SR +
Sbjct: 193 RSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSK 252
Query: 278 RRSRSTSRERRKLSRSRSRDRHR------------------RHRSRSRSHSRGHRR 315
+SRS S K SRS+S+D+ RH+S+S+S SR R
Sbjct: 253 EKSRSRSHSAGK-SRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQER 307
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,707,575
Number of Sequences: 37866
Number of extensions: 472269
Number of successful extensions: 18838
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 572
Number of HSP's that attempted gapping in prelim test: 5211
Number of HSP's gapped (non-prelim): 5874
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.