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Search of human proteins with 8922149
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922149 downstream neighbor of SON [Homo sapiens]
(566 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922149 downstream neighbor of SON [Homo sapiens] 1136 0.0
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|118582269 splicing factor, arginine/serine-rich 1 isoform 2 [... 42 0.002
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ... 40 0.004
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 40 0.006
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 40 0.006
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 40 0.006
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 40 0.007
gi|156415990 Y box binding protein 2 [Homo sapiens] 40 0.007
gi|148762978 similar to CG15216-PA [Homo sapiens] 40 0.007
gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 37 0.037
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ... 37 0.037
gi|5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Ho... 37 0.037
gi|28269693 xylosyltransferase I [Homo sapiens] 37 0.048
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 37 0.048
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.063
gi|154146199 sal-like 3 [Homo sapiens] 36 0.082
gi|169166217 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 36 0.11
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14
gi|50428935 BPY2 interacting protein 1 [Homo sapiens] 35 0.18
gi|70608170 H6 family homeobox 2 [Homo sapiens] 35 0.24
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 35 0.24
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 35 0.24
gi|89257348 homeo box HB9 [Homo sapiens] 35 0.24
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 35 0.24
>gi|8922149 downstream neighbor of SON [Homo sapiens]
Length = 566
Score = 1136 bits (2938), Expect = 0.0
Identities = 566/566 (100%), Positives = 566/566 (100%)
Query: 1 MALSVPGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPA 60
MALSVPGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPA
Sbjct: 1 MALSVPGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPA 60
Query: 61 AGGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVPFLDSNQENDLLWE 120
AGGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVPFLDSNQENDLLWE
Sbjct: 61 AGGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVPFLDSNQENDLLWE 120
Query: 121 EKFPERTTVTELPQTSHVSFSEPDIPSSKSTELPVDWSIKTRLLFTSSQPFTWADHLKAQ 180
EKFPERTTVTELPQTSHVSFSEPDIPSSKSTELPVDWSIKTRLLFTSSQPFTWADHLKAQ
Sbjct: 121 EKFPERTTVTELPQTSHVSFSEPDIPSSKSTELPVDWSIKTRLLFTSSQPFTWADHLKAQ 180
Query: 181 EEAQGLVQHCRATEVTLPKSIQDPKLSSELRCTFQQSLIYWLHPALSWLPLFPRIGADRK 240
EEAQGLVQHCRATEVTLPKSIQDPKLSSELRCTFQQSLIYWLHPALSWLPLFPRIGADRK
Sbjct: 181 EEAQGLVQHCRATEVTLPKSIQDPKLSSELRCTFQQSLIYWLHPALSWLPLFPRIGADRK 240
Query: 241 MAGKTSPWSNDATLQHVLMSDWSVSFTSLYNLLKTKLCPYFYVCTYQFTVLFRAAGLAGS 300
MAGKTSPWSNDATLQHVLMSDWSVSFTSLYNLLKTKLCPYFYVCTYQFTVLFRAAGLAGS
Sbjct: 241 MAGKTSPWSNDATLQHVLMSDWSVSFTSLYNLLKTKLCPYFYVCTYQFTVLFRAAGLAGS 300
Query: 301 DLITALISPTTRGLREAMRNEGIEFSLPLIKESGHKKETASGTSLGYGEEQAISDEDEEE 360
DLITALISPTTRGLREAMRNEGIEFSLPLIKESGHKKETASGTSLGYGEEQAISDEDEEE
Sbjct: 301 DLITALISPTTRGLREAMRNEGIEFSLPLIKESGHKKETASGTSLGYGEEQAISDEDEEE 360
Query: 361 SFSWLEEMGVQDKIKKPDILSIKLRKEKHEVQMDHRPESVVLVKGINTFTLLNFLINSKS 420
SFSWLEEMGVQDKIKKPDILSIKLRKEKHEVQMDHRPESVVLVKGINTFTLLNFLINSKS
Sbjct: 361 SFSWLEEMGVQDKIKKPDILSIKLRKEKHEVQMDHRPESVVLVKGINTFTLLNFLINSKS 420
Query: 421 LVATSGPQAGLPPTLLSPVAFRGATMQMLKARSVNVKTQALSGYRDQFSLEITGPIMPHS 480
LVATSGPQAGLPPTLLSPVAFRGATMQMLKARSVNVKTQALSGYRDQFSLEITGPIMPHS
Sbjct: 421 LVATSGPQAGLPPTLLSPVAFRGATMQMLKARSVNVKTQALSGYRDQFSLEITGPIMPHS 480
Query: 481 LHSLTMLLKSSQSGSFSAVLYPHEPTAVFNICLQMDKVLDMEVVHKELTNCGLHPNTLEQ 540
LHSLTMLLKSSQSGSFSAVLYPHEPTAVFNICLQMDKVLDMEVVHKELTNCGLHPNTLEQ
Sbjct: 481 LHSLTMLLKSSQSGSFSAVLYPHEPTAVFNICLQMDKVLDMEVVHKELTNCGLHPNTLEQ 540
Query: 541 LSQIPLLGKSSLRNVVLRDYIYNWRS 566
LSQIPLLGKSSLRNVVLRDYIYNWRS
Sbjct: 541 LSQIPLLGKSSLRNVVLRDYIYNWRS 566
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/103 (35%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 7 GYSPGFRKP-PEVVRLRRKRARSRGAAASPPRELTEPAARR-AALVAGLPLRPFPAAGGR 64
G GF P P +V R AAA PP PAA R +AL A P R P G
Sbjct: 28 GEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGG 87
Query: 65 GGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVP 107
GGG P P P V A P GP +P +P P
Sbjct: 88 GGGDIASPLPPALQP----RGAPAVPAAPSPGPLPARPSSPPP 126
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/103 (35%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 7 GYSPGFRKP-PEVVRLRRKRARSRGAAASPPRELTEPAARR-AALVAGLPLRPFPAAGGR 64
G GF P P +V R AAA PP PAA R +AL A P R P G
Sbjct: 28 GEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGG 87
Query: 65 GGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVP 107
GGG P P P V A P GP +P +P P
Sbjct: 88 GGGDIASPLPPALQP----RGAPAVPAAPSPGPLPARPSSPPP 126
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/103 (35%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 7 GYSPGFRKP-PEVVRLRRKRARSRGAAASPPRELTEPAARR-AALVAGLPLRPFPAAGGR 64
G GF P P +V R AAA PP PAA R +AL A P R P G
Sbjct: 28 GEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGG 87
Query: 65 GGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVP 107
GGG P P P V A P GP +P +P P
Sbjct: 88 GGGDIASPLPPALQP----RGAPAVPAAPSPGPLPARPSSPPP 126
>gi|118582269 splicing factor, arginine/serine-rich 1 isoform 2
[Homo sapiens]
Length = 201
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Query: 58 FPAAG---GRGGGSGGGPAAARRN---PFARLDNRPRVAAEPPDGPAREQPEAPVPFLDS 111
FP +G GRGGG GGG A R P R +NR V+ PP G ++ +
Sbjct: 88 FPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKD------HM 141
Query: 112 NQENDLLWEEKFPERTTVTELPQTSHVSFSEPDIPSSKSTELPVDWSIKTRLLFTSSQPF 171
+ D+ + + + + T V E + ++++ + ++K V + TR+LF
Sbjct: 142 REAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGY---TRILFFDQNWI 198
Query: 172 TWA 174
W+
Sbjct: 199 QWS 201
>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
sapiens]
Length = 252
Score = 40.4 bits (93), Expect = 0.004
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 24/115 (20%)
Query: 17 EVVRLRRKRARSRGAAASPPREL--------TEPAARRAA-LVAGLPLRP--FPAAGGRG 65
EV R+R++ A + GAA +P +P + AA +AG P P PAAG RG
Sbjct: 122 EVWRIRQREAGAAGAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRG 181
Query: 66 GGSGGGPAAARRNPFARLDNRPRVAAEPP-------------DGPAREQPEAPVP 107
GSG R AR PR A+ PP GP RE A +P
Sbjct: 182 LGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLP 236
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 40.0 bits (92), Expect = 0.006
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 1 MALSVPGYSPGFRKPPEVVRLRRKR-ARSRGAAASPPRELTEPA--ARRAALVAGLPLRP 57
+ ++V S GF+ R+ R R AR+ A PPR PA ARR P RP
Sbjct: 56 LLMAVKRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKP---PRRP 112
Query: 58 FPAAGGRGGGSGGGPAAARRNPFAR----LDNRPRVAAEPPDGPAREQPEA 104
AAG PAA + P R L +RP+ + P GP R A
Sbjct: 113 KGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSA 163
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 40.0 bits (92), Expect = 0.006
Identities = 32/81 (39%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 6 PGYSPG-FRKPPEVVRLRRKRARSRGAAASPP--------RELTEPAARRAALVAGLPLR 56
PG G +R+PP +R R AA SPP R PAA+ GLP R
Sbjct: 30 PGPGRGSWRRPP-------RRQRPGPAAPSPPARGAAAWGRSGGGPAAQSGGDGGGLPRR 82
Query: 57 PFPAAGGRGGGSGGGPAAARR 77
GGRGGGSGG RR
Sbjct: 83 AGAEPGGRGGGSGGTMPGGRR 103
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 40.0 bits (92), Expect = 0.006
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 1 MALSVPGYSPGFRKPPEVVRLRRKR-ARSRGAAASPPRELTEPA--ARRAALVAGLPLRP 57
+ ++V S GF+ R+ R R AR+ A PPR PA ARR P RP
Sbjct: 56 LLMAVKRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKP---PRRP 112
Query: 58 FPAAGGRGGGSGGGPAAARRNPFAR----LDNRPRVAAEPPDGPAREQPEA 104
AAG PAA + P R L +RP+ + P GP R A
Sbjct: 113 KGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSA 163
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 39.7 bits (91), Expect = 0.007
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 1 MALSVPGYSPGFRKPPEVVRLRRKR-ARSRGAAASPPRELTEPA--ARRAALVAGLPLRP 57
+ ++V S GF+ R+ R R AR+ A PPR PA ARR P RP
Sbjct: 56 LLMAVKRRSGGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKP---PRRP 112
Query: 58 FPAAGGRGGGSGGGPAAARRNPFAR----LDNRPRVAAEPPDGPAREQPEA 104
AAG PAA + P R L +RP+ + P GP R A
Sbjct: 113 KGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQRPRGPGRSARSA 163
>gi|156415990 Y box binding protein 2 [Homo sapiens]
Length = 364
Score = 39.7 bits (91), Expect = 0.007
Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 30 GAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSG--GGPAAARRN-PFARLDNR 86
GA A P + AA A+V +P GG GGG G GPAA + P +R
Sbjct: 9 GATAVPAATVPATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGN 68
Query: 87 PRVAAE-PPDGPAREQPEAPV 106
P A P PAR Q + PV
Sbjct: 69 PATAVSGTPAPPARSQADKPV 89
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 39.7 bits (91), Expect = 0.007
Identities = 35/94 (37%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 6 PGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGL-PLRPFPAAGGR 64
PG +P PP + R R+ R+ A ASP RE PA R AL L P++ P GG
Sbjct: 101 PGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALR--ALANELHPIKLQPQRGGP 158
Query: 65 GGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPA 98
G + AA R P EPP GPA
Sbjct: 159 GRVAPLCAAAGRCAP-----------PEPPAGPA 181
>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
Length = 435
Score = 37.4 bits (85), Expect = 0.037
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 6 PGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAA----RRAALVAGLP--LRPFP 59
PG P P+ R + GAA P R L+ A RRA ++A + FP
Sbjct: 238 PGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVSVQERRAQVLATIHGHAGAFP 297
Query: 60 AAGGRGGGSGGGPAAARRNPFARLDNRP----RVAAEPPDGPA 98
AAG G G+ GG ++ R R P R + P GPA
Sbjct: 298 AAGDAGEGAPGGGSSPERVARGRGLPGPAESLRAGGQAPRGPA 340
>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
sapiens]
Length = 252
Score = 37.4 bits (85), Expect = 0.037
Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 24/115 (20%)
Query: 17 EVVRLRRKRARSRGAAASPPREL--------TEPAARRAA-LVAGLPLRP--FPAAGGRG 65
EV R+R++ A + AA +P +P + AA +AG P P PAAG RG
Sbjct: 122 EVWRIRQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRG 181
Query: 66 GGSGGGPAAARRNPFARLDNRPRVAAEPP-------------DGPAREQPEAPVP 107
GSG R AR PR A+ PP GP RE A +P
Sbjct: 182 LGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLP 236
>gi|5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Homo
sapiens]
Length = 248
Score = 37.4 bits (85), Expect = 0.037
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 58 FPAAG---GRGGGSGGGPAAARRN---PFARLDNRPRVAAEPPDGPAREQPEAPVPFLDS 111
FP +G GRGGG GGG A R P R +NR V+ PP G ++ +
Sbjct: 88 FPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKD------HM 141
Query: 112 NQENDLLWEEKFPERTTVTELPQTSHVSFSEPDIPSSK 149
+ D+ + + + + T V E + ++++ + ++K
Sbjct: 142 REAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 37.0 bits (84), Expect = 0.048
Identities = 35/112 (31%), Positives = 40/112 (35%), Gaps = 24/112 (21%)
Query: 29 RGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGGG----------------- 71
RG AA E PA LP P A GG GGG GGG
Sbjct: 46 RGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEP 105
Query: 72 ----PAAARRNPFARLDNRPR--VAAEPPDGPAREQPEAPVPFLDSNQENDL 117
PA+ P LD P + E DG +P+ V DSN EN +
Sbjct: 106 RGQQPASRGALPARALDPHPSPLITLETQDGYFSHRPKEKVR-TDSNNENSV 156
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 37.0 bits (84), Expect = 0.048
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 9 SPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGS 68
+PG P RLRR+RA+ G + R L A G L P P G G
Sbjct: 85 APGAAPRPRRQRLRRRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSP---GARGAV 141
Query: 69 GGGPAAAR-RNPFARLDNRPRV 89
G PAAAR R P R P++
Sbjct: 142 GAAPAAARHRKPRGRSRRAPQM 163
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 36.6 bits (83), Expect = 0.063
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 30 GAAASPPRELTEPAAR---RAALVAGLPL---------RPFPAAGGRGGGSGGGPAAARR 77
G+A SPP + + P+ R +AA A P R P++ GRGG + GG RR
Sbjct: 329 GSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRR 388
Query: 78 NPFARLDNRPRVAAEPPDGPAREQPEAP 105
R +R +A G R +P P
Sbjct: 389 RRRRRRRSRSSASAPRRRGRRRPRPAPP 416
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 36.2 bits (82), Expect = 0.082
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 35 PPRELTEPAARRAA------LVAGLPLRPFPAAGGRGGGSGGGPAAARRNPFARLDNRPR 88
PPR PAA +A + GL P A +G GPAA A+ +RP
Sbjct: 237 PPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPE 296
Query: 89 VAAEPPDGPAREQPEAP 105
A P GPA +P AP
Sbjct: 297 SGASTPGGPA--EPSAP 311
>gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 35.8 bits (81), Expect = 0.11
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 30 GAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGGGPAAARR 77
GAAA+PP P R+ + +AG + FP GG GGGSG A R+
Sbjct: 106 GAAAAPP----PPGVRQCSALAGSSVPWFPGGGG-GGGSGSARRALRK 148
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 35.8 bits (81), Expect = 0.11
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 18/97 (18%)
Query: 13 RKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGGGP 72
RKPP + R R SPPRE A RR + A GR G
Sbjct: 377 RKPPPLTR-------GRSVEQSPPRERPRAAGRRGRMAE---------ASGRRGSPRARK 420
Query: 73 AAARRNPFARLDNRPRVAAEPPDGPA--REQPEAPVP 107
A+ ++ + L V + PP P RE+P P P
Sbjct: 421 ASRSQSETSLLGRASAVPSGPPKYPTAEREEPRPPRP 457
Score = 29.6 bits (65), Expect = 7.7
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Query: 2 ALSVPGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAA 61
+ S P + G PE +RAR+ P A R+ G P P A
Sbjct: 186 SFSAPYPTAGGSAGPEACSSAERRARAGPFLTPSP---LHAVAMRSPRPCGRPPTDSPDA 242
Query: 62 GGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQ 101
GG G G +A R R +PR + DG R Q
Sbjct: 243 GGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQ 282
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.14
Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 27/109 (24%)
Query: 9 SPGFRKPPEVVRLRRKR---------------ARSRGAAASPPRELTEPAARRAALVAGL 53
S G+ +PP V R+R A + A A PPRE + A A G
Sbjct: 30 SAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARA-ARGP 88
Query: 54 PLRPFPAAGGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQP 102
P RP AGG+ GG R P RPR PP P R +P
Sbjct: 89 PKRP---AGGQTGGVEAASGEERSQP-----RRPR---RPPPAPRRPRP 126
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.14
Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 27/109 (24%)
Query: 9 SPGFRKPPEVVRLRRKR---------------ARSRGAAASPPRELTEPAARRAALVAGL 53
S G+ +PP V R+R A + A A PPRE + A A G
Sbjct: 30 SAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARA-ARGP 88
Query: 54 PLRPFPAAGGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQP 102
P RP AGG+ GG R P RPR PP P R +P
Sbjct: 89 PKRP---AGGQTGGVEAASGEERSQP-----RRPR---RPPPAPRRPRP 126
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.14
Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 27/109 (24%)
Query: 9 SPGFRKPPEVVRLRRKR---------------ARSRGAAASPPRELTEPAARRAALVAGL 53
S G+ +PP V R+R A + A A PPRE + A A G
Sbjct: 30 SAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARA-ARGP 88
Query: 54 PLRPFPAAGGRGGGSGGGPAAARRNPFARLDNRPRVAAEPPDGPAREQP 102
P RP AGG+ GG R P RPR PP P R +P
Sbjct: 89 PKRP---AGGQTGGVEAASGEERSQP-----RRPR---RPPPAPRRPRP 126
>gi|50428935 BPY2 interacting protein 1 [Homo sapiens]
Length = 1059
Score = 35.0 bits (79), Expect = 0.18
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 13 RKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAG-------LPLRPFPAA-GGR 64
R+ V R R+ AR AA+P + T AA + +AG L R P+ GGR
Sbjct: 854 RQTENVSRTRKPLARPNSRAAAP--KATPVAAAKTKGLAGGDRASRPLSARSEPSEKGGR 911
Query: 65 GGGS--GGGPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVPFLDSNQENDLLWEEK 122
S P A R P +RP V+A PP P + +L S L+ EE
Sbjct: 912 APLSRKSSTPKTATRGPSGSASSRPGVSATPPKSPV----YLDLAYLPSGSSAHLVDEEF 967
Query: 123 F 123
F
Sbjct: 968 F 968
>gi|70608170 H6 family homeobox 2 [Homo sapiens]
Length = 273
Score = 34.7 bits (78), Expect = 0.24
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 33/198 (16%)
Query: 54 PLRPFPAAGGRGGGSGGGPAAARRNPFAR------LDNRPRVAAEPPDGPAREQPEAPVP 107
P PFP G G G GP R PF + + R+ P E+P
Sbjct: 82 PPIPFPCLGTPKGSGGSGPGGLERTPFLSPSHSDFKEEKERLLPAGSPSPGSERPR---- 137
Query: 108 FLDSNQENDLLWEEKFP----ERTTVTELPQT----SHVSFSEPDIPSSKSTELPVDWSI 159
D E +K R+ V +L T ++S SE +S S +L + +
Sbjct: 138 --DGGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLAS-SLQL-TETQV 193
Query: 160 KTRLLFTSSQPFTWADHLKAQEEAQGLVQHCRATEVTLPKSIQDPKLSSELRCTFQQSL- 218
KT + ++ W L A+ EA + T V++P +D SS LR +SL
Sbjct: 194 KT---WFQNRRNKWKRQLSAELEAANMAHASAQTLVSMPLVFRD---SSLLRVPVPRSLA 247
Query: 219 ----IYWLHPALSWLPLF 232
+Y+ LS LPL+
Sbjct: 248 FPAPLYYPGSNLSALPLY 265
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 34.7 bits (78), Expect = 0.24
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 22 RRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGGGPAAARRNPFA 81
R +R R+ G PP P RR + R PAA R G GG + + P
Sbjct: 95 RTRRRRTLGRRCRPPAPRPRPRPRRKLALDQAATR-IPAARPRPPGPGGRGSHWKIQPGV 153
Query: 82 RLDNRPRVAAEPPDGPAREQPEAPVPFLDSNQENDLLWEEKFPER 126
+ RP +A+P GP E+ A P + + W R
Sbjct: 154 QRLPRPTPSAQPRPGPP-ERRRASRPLIGCGRGGGGTWRRAADSR 197
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 34.7 bits (78), Expect = 0.24
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 9 SPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAAR---RAALVAGLPLRPFP-AAGGR 64
+PG + PE R AR+ G AA+ + + RAA + L R P AA
Sbjct: 1331 APGGQGRPEAGR-PASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAPAF 1389
Query: 65 GGGSGGGPAAARRNPFARLDNRPRVAAEPPDG-PAREQPEAPVPF 108
G GGG A A PR PP G PAR+ AP P+
Sbjct: 1390 AGPGGGGSGALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPGPW 1434
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 34.7 bits (78), Expect = 0.24
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Query: 9 SPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGS 68
SP +PP R R + SPPR L AA A LP F AGG GGG+
Sbjct: 59 SPASSEPPAA-----PADRLRAESPSPPRLL-------AAHCALLPKPGFLGAGGGGGGT 106
Query: 69 GGG 71
GGG
Sbjct: 107 GGG 109
Score = 32.7 bits (73), Expect = 0.91
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 32 AASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGGGPAAARRNPFARLDNRPRVAA 91
A PPR + +A ALV L GG GGG G + +P ++
Sbjct: 14 AVDPPRAASAQSAP-LALVTSLAAAASGTGGGGGGGGASGGTSGSCSP---------ASS 63
Query: 92 EPPDGPA-REQPEAPVP 107
EPP PA R + E+P P
Sbjct: 64 EPPAAPADRLRAESPSP 80
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 34.7 bits (78), Expect = 0.24
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 26 ARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGGGPAAARRNPFARLDN 85
A++ G AA PP E E AA AA +P A G GG +GG +
Sbjct: 100 AQALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGK-------- 151
Query: 86 RPRVAAEPPDGPAREQPEAPVP 107
R EP + E P + VP
Sbjct: 152 --REEDEPEERSGDETPGSEVP 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,627,615
Number of Sequences: 37866
Number of extensions: 1214871
Number of successful extensions: 8409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 7903
Number of HSP's gapped (non-prelim): 653
length of query: 566
length of database: 18,247,518
effective HSP length: 108
effective length of query: 458
effective length of database: 14,157,990
effective search space: 6484359420
effective search space used: 6484359420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.