Guide to the Human Genome
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Name: LOC283104 Sequence: fasta or formatted (96aa) NCBI GI: 89034573
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {96aa} PREDICTED: hypothetical protein
alt mRNA {96aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            17.7         17           2
 C cysteine            2.1          2           1
 D aspartate           2.1          2           1
 E glutamate           1.0          1           1
 F phenylalanine       1.0          1           1
 G glycine            14.6         14           3
 H histidine           1.0          1           1
 I isoleucine          1.0          1           1
 K lysine              0.0          0           0
 L leucine             8.3          8           2
 M methionine          1.0          1           1
 N asparagine          0.0          0           0
 P proline            21.9         21           2
 Q glutamine           2.1          2           1
 R arginine            9.4          9           2
 S serine              7.3          7           2
 T threonine           1.0          1           1
 V valine              6.2          6           2
 W tryptophan          1.0          1           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC283104             1.000   PREDICTED: hypothetical protein 
LOC283104             1.000   PREDICTED: hypothetical protein 
DAZAP1                0.095   DAZ associated protein 1 isoform a 
DAZAP1                0.095   DAZ associated protein 1 isoform b 
WBP11                 0.095   WW domain binding protein 11 
ATG9B                 0.089   ATG9 autophagy related 9 homolog B 
FLJ22184              0.089   PREDICTED: hypothetical protein LOC80164 
WAS                   0.089   Wiskott-Aldrich syndrome protein 
NACA                  0.084   nascent polypeptide-associated complex alpha subuni...
APBB1IP               0.084   amyloid beta (A4) precursor protein-binding, family ...
LOC100131102          0.084   PREDICTED: hypothetical protein 
LOC100131102          0.084   PREDICTED: hypothetical protein 
WNK2                  0.078   WNK lysine deficient protein kinase 2 
FGF2                  0.078   fibroblast growth factor 2 
COL15A1               0.078   alpha 1 type XV collagen precursor 
WASF2                 0.078   WAS protein family, member 2 
BRSK1                 0.078   BR serine/threonine kinase 1 
UNCX                  0.078   UNC homeobox 
SAMD1                 0.078   sterile alpha motif domain containing 1 
CEL                   0.078   carboxyl ester lipase precursor 
LOC100293445          0.078   PREDICTED: hypothetical protein 
LOC100288225          0.078   PREDICTED: hypothetical protein 
LOC100288225          0.078   PREDICTED: hypothetical protein XP_002343333 
FLJ22184              0.073   PREDICTED: hypothetical protein FLJ22184 
LOC100293055          0.073   PREDICTED: similar to COL22A1 protein 
FLJ22184              0.073   PREDICTED: hypothetical protein FLJ22184 
FUBP1                 0.073   far upstream element-binding protein 
ENAH                  0.067   enabled homolog isoform a 
ENAH                  0.067   enabled homolog isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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