Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 89025853
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89025853 PREDICTED: hypothetical protein [Homo sapiens]
(151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169171308 PREDICTED: hypothetical protein [Homo sapiens] 328 1e-90
gi|89025853 PREDICTED: hypothetical protein [Homo sapiens] 328 1e-90
gi|42657886 PREDICTED: hypothetical protein [Homo sapiens] 328 1e-90
gi|42658266 PREDICTED: hypothetical protein [Homo sapiens] 328 1e-90
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 6e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 4e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 48 4e-06
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 48 4e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 48 4e-06
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 45 2e-05
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 45 2e-05
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 44 5e-05
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 44 5e-05
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 43 1e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 43 1e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 43 1e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 43 1e-04
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 42 2e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 42 2e-04
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 41 4e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 41 4e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 41 4e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 6e-04
gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens] 40 8e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 40 0.001
gi|11386183 WAS protein family, member 2 [Homo sapiens] 40 0.001
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 40 0.001
gi|118402590 myosin XV [Homo sapiens] 39 0.001
gi|117306178 hypothetical protein LOC55731 [Homo sapiens] 39 0.001
>gi|169171308 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 328 bits (840), Expect = 1e-90
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR
Sbjct: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
Query: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA
Sbjct: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
Query: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP
Sbjct: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
>gi|89025853 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 328 bits (840), Expect = 1e-90
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR
Sbjct: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
Query: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA
Sbjct: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
Query: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP
Sbjct: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
>gi|42657886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 328 bits (840), Expect = 1e-90
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR
Sbjct: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
Query: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA
Sbjct: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
Query: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP
Sbjct: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
>gi|42658266 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 328 bits (840), Expect = 1e-90
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR
Sbjct: 1 MATVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQR 60
Query: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA
Sbjct: 61 LQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAA 120
Query: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP
Sbjct: 121 SPHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.4 bits (119), Expect = 6e-07
Identities = 47/128 (36%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 24 PPTCSPALAGPPPPSFPERAASSEGSPTHSPPH--PPQRLQPPVRVVPKPTRAL--STLR 79
PP P LA PP P AS SP+ +PP PP PP++V P P +L S L
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 80 QLHVQ-PPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQ-LC 137
+ Q PP + P + SP F G A +PSA L P SP PQ L
Sbjct: 783 KPPPQAPPALATPPLQAL--PSPPASFPGQAPFSPSASL----PMSPLATPPPQAPPVLA 836
Query: 138 QSLPRVPP 145
L +VPP
Sbjct: 837 APLLQVPP 844
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/126 (30%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 22 ACPPT-CSPALAGPPPPSFPERAASSEGSPTHSPP--HPPQRLQPPVRVVPKPTRALSTL 78
A PP+ P+LA PP P AS SP+ +PP PP PP++V P P S
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP--PASPP 746
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQ 138
PP R P + P A P + L P +P L P Q
Sbjct: 747 MSPSATPPPRVPPLLAAPPLQVP----PSPPASLPMSPLAKPPPQAPPALATPP----LQ 798
Query: 139 SLPRVP 144
+LP P
Sbjct: 799 ALPSPP 804
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 28/152 (18%)
Query: 15 PFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPH--PPQRLQPPVRVVPK-- 70
P +P PP +P PP PS P + + SP +PP PP PP++ P
Sbjct: 326 PLPATLPPSPPLATPLPLAPPSPSAPP-SLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ 384
Query: 71 ---PTRALSTLRQLHVQPP-------------TRSQPHWRRTHHRSPFTRFTGSAAPTPS 114
P + +L +Q P + P + TH + A+ T
Sbjct: 385 TIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSP 444
Query: 115 AQLHAASPHSPQRLQHPQCAQLCQSLPRVPPL 146
++ + P SP LQ P SLP PPL
Sbjct: 445 SRPASTPPDSPP-LQAP------LSLPASPPL 469
Score = 35.8 bits (81), Expect = 0.014
Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 21/114 (18%)
Query: 24 PPTCSPALAGPPPPSFPERAASS--EGSP--------THSPPHPPQRLQPPVRVVPKPTR 73
PP +P+ PPP P AS +G P T P PP PP++ P P
Sbjct: 579 PPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPA 638
Query: 74 A--LSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSP 125
+ LS L Q P H ++PF S P+P Q + P SP
Sbjct: 639 SPPLSPLATPSPQAPNALAVHLL----QAPF-----SPPPSPPVQAPFSPPASP 683
Score = 35.4 bits (80), Expect = 0.019
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 12/108 (11%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQ 80
P CP C L PP P + T P PP PP++ +P P LS L
Sbjct: 561 PPCPAPCP--LQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSP--PLSPL-- 614
Query: 81 LHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRL 128
PP ++ P ++P A P + L SP +P L
Sbjct: 615 --ATPPPQAPPXLALPPLQAP----PSPPASPPLSPLATPSPQAPNAL 656
Score = 35.4 bits (80), Expect = 0.019
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 10 SMRSKPFARAVPACPPTCS--PALAGPPPP-SFPERA-----ASSEGSPTHSPP-HPPQR 60
S+ P A+ P PP + P A P PP SFP +A AS SP +PP P
Sbjct: 775 SLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPV 834
Query: 61 LQPPVRVVPKPTRALSTLRQLHVQPPT 87
L P+ VP A TL Q +PPT
Sbjct: 835 LAAPLLQVPPSPPASPTL-QAPRRPPT 860
Score = 34.7 bits (78), Expect = 0.032
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 24/128 (18%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPH--PPQRLQPPVRVVPKPTRALSTL 78
P PP P A PP+ P SP+ +PP PP PP++V P P S
Sbjct: 664 PFSPPPSPPVQAPFSPPASPP------VSPSATPPSQAPPSLAAPPLQVPPSP--PASPP 715
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQ 138
PP ++ P P P+P A+ P SP P+ L
Sbjct: 716 MSPSATPPPQAPP---------PLAAPPLQVPPSPP----ASPPMSPSATPPPRVPPLLA 762
Query: 139 SLP-RVPP 145
+ P +VPP
Sbjct: 763 APPLQVPP 770
Score = 29.3 bits (64), Expect = 1.3
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 8/149 (5%)
Query: 3 TVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQ 62
TV G + K A + A T P G P P+ R+ ++ P P R +
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPT-PGTPSPAMARRSRAAGTEVGLPRPAPSARPR 199
Query: 63 PPVRVVPKPTRALSTLRQLHVQPPTRSQPH----WRRTHHRSPFTRFTGSAAPTPSAQLH 118
PP K + S P R +P +R RS + T ++P S
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 259
Query: 119 AASPHSPQRLQHPQCAQLCQSL--PRVPP 145
+P +P P+ L Q+L P+V P
Sbjct: 260 RGTPRAPAHPSQPKPKGL-QALRPPQVTP 287
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.8 bits (112), Expect = 4e-06
Identities = 44/128 (34%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 22 ACPPT-CSPALAGPPPPSFPERAASSEGSPTHSPPH--PPQRLQPPVRVVPKPTRALSTL 78
A PP+ P+LA PP P AS SP+ +PP PP PP+++ P +A L
Sbjct: 464 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 523
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQ-LC 137
PP ++ P SP F G A +PSA L P SP PQ L
Sbjct: 524 ----ATPPLQALP--------SPPASFPGQAPFSPSASL----PMSPLATPPPQAPPVLA 567
Query: 138 QSLPRVPP 145
L +VPP
Sbjct: 568 APLLQVPP 575
Score = 36.6 bits (83), Expect = 0.008
Identities = 38/131 (29%), Positives = 50/131 (38%), Gaps = 31/131 (23%)
Query: 15 PFARAVPACPPTCSPALAGPPPPSFPERAASSEGSP----THS--------------PPH 56
P A P+ PP+ + P P P +A +S GSP THS P
Sbjct: 339 PLAPPSPSAPPSLQTLPSPPATP--PSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQA 396
Query: 57 PPQRLQPPVRVVPKPTRA--LSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPS 114
PP PP++ P P + LS L Q P H ++PF S P+P
Sbjct: 397 PPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL----QAPF-----SPPPSPP 447
Query: 115 AQLHAASPHSP 125
Q + P SP
Sbjct: 448 VQAPFSPPASP 458
Score = 35.8 bits (81), Expect = 0.014
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQ 80
P P+ S AL PP+ P SS + + P P L PP P +L TL
Sbjct: 303 PLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLP---LAPP---SPSAPPSLQTLPS 356
Query: 81 LHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPS-AQLHAASPHSPQRLQHPQCAQLCQS 139
PP+++ T SP + T S P+P + L P +P L P Q S
Sbjct: 357 PPATPPSQA-----TTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPP-LQAPPS 410
Query: 140 LPRVPPL 146
P PPL
Sbjct: 411 PPASPPL 417
Score = 35.4 bits (80), Expect = 0.019
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
Query: 11 MRSKPFARAVPACPPTCSPALAGP-------PPPSFPERA-----ASSEGSPTHSPP--H 56
+ + P A P PP PALA P PP SFP +A AS SP +PP
Sbjct: 505 LAAPPLQLAKP--PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 562
Query: 57 PPQRLQPPVRVVPKPTRALSTLRQLHVQPPT 87
PP P ++V P P S Q +PPT
Sbjct: 563 PPVLAAPLLQVPPSP--PASPTLQAPRRPPT 591
Score = 32.0 bits (71), Expect = 0.20
Identities = 37/134 (27%), Positives = 48/134 (35%), Gaps = 17/134 (12%)
Query: 24 PPTCSPALAGPPPPSFPERAASSEGSPTHSP-PHPPQR-----LQPPVRVVPKP------ 71
PP PALA PP + P AS SP +P P P LQ P P P
Sbjct: 393 PPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 452
Query: 72 TRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHP 131
+ S PP+++ P + P A P + P +P L P
Sbjct: 453 SPPASPPVSPSATPPSQAPPSLAAPPLQVP----PSPPASPPMSPSATPPPQAPPPLAAP 508
Query: 132 QCAQLCQSLPRVPP 145
QL + P+ PP
Sbjct: 509 P-LQLAKPPPQAPP 521
Score = 30.0 bits (66), Expect = 0.78
Identities = 37/140 (26%), Positives = 46/140 (32%), Gaps = 23/140 (16%)
Query: 10 SMRSKPFARAVPACPPT-CSPALAGPPPPSFPERAASSEGSPTHSP-------------- 54
S+ P A P PP +P L PP P + PT P
Sbjct: 549 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 608
Query: 55 PHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPS 114
P PP PP R P+ LS S P R + P +A+P P
Sbjct: 609 PGPP---PPPSR---SPSSTLSGPDLAGHSSSATSTPEELRGYDSGP--EGGAAASPPPD 660
Query: 115 AQLHAASPHSPQRLQHPQCA 134
A+L A P + R P A
Sbjct: 661 AELAACHPAAWSRGPAPPLA 680
Score = 29.3 bits (64), Expect = 1.3
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 8/149 (5%)
Query: 3 TVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQ 62
TV G + K A + A T P G P P+ R+ ++ P P R +
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPT-PGTPSPAMARRSRAAGTEVGLPRPAPSARPR 199
Query: 63 PPVRVVPKPTRALSTLRQLHVQPPTRSQPH----WRRTHHRSPFTRFTGSAAPTPSAQLH 118
PP K + S P R +P +R RS + T ++P S
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 259
Query: 119 AASPHSPQRLQHPQCAQLCQSL--PRVPP 145
+P +P P+ L Q+L P+V P
Sbjct: 260 RGTPRAPAHPSQPKPKGL-QALRPPQVTP 287
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 47.8 bits (112), Expect = 4e-06
Identities = 44/128 (34%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 22 ACPPT-CSPALAGPPPPSFPERAASSEGSPTHSPPH--PPQRLQPPVRVVPKPTRALSTL 78
A PP+ P+LA PP P AS SP+ +PP PP PP+++ P +A L
Sbjct: 425 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 484
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQ-LC 137
PP ++ P SP F G A +PSA L P SP PQ L
Sbjct: 485 ----ATPPLQALP--------SPPASFPGQAPFSPSASL----PMSPLATPPPQAPPVLA 528
Query: 138 QSLPRVPP 145
L +VPP
Sbjct: 529 APLLQVPP 536
Score = 41.6 bits (96), Expect = 3e-04
Identities = 43/142 (30%), Positives = 58/142 (40%), Gaps = 33/142 (23%)
Query: 8 VGSMRSKPFARAVPACPPTCS--PAL--AGPPPPSFPERAASSEGSP----THS------ 53
+G + S P A P+ PP+ S P+L PP + P +A +S GSP THS
Sbjct: 287 LGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPP 346
Query: 54 --------PPHPPQRLQPPVRVVPKPTRA--LSTLRQLHVQPPTRSQPHWRRTHHRSPFT 103
P PP PP++ P P + LS L Q P H ++PF
Sbjct: 347 LSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL----QAPF- 401
Query: 104 RFTGSAAPTPSAQLHAASPHSP 125
S P+P Q + P SP
Sbjct: 402 ----SPPPSPPVQAPFSPPASP 419
Score = 35.4 bits (80), Expect = 0.019
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
Query: 11 MRSKPFARAVPACPPTCSPALAGP-------PPPSFPERA-----ASSEGSPTHSPP--H 56
+ + P A P PP PALA P PP SFP +A AS SP +PP
Sbjct: 466 LAAPPLQLAKP--PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 523
Query: 57 PPQRLQPPVRVVPKPTRALSTLRQLHVQPPT 87
PP P ++V P P S Q +PPT
Sbjct: 524 PPVLAAPLLQVPPSP--PASPTLQAPRRPPT 552
Score = 30.4 bits (67), Expect = 0.60
Identities = 32/143 (22%), Positives = 47/143 (32%), Gaps = 22/143 (15%)
Query: 25 PTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPV-RVVPKPTRALSTLRQLHV 83
P +P+ PP P ++ SS + + P P R +P + +P + +
Sbjct: 181 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPL 240
Query: 84 QPPTRSQPHWRRT-----HHRSPFTR----------------FTGSAAPTPSAQLHAASP 122
P RS P R T H P + + P S+ L SP
Sbjct: 241 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 300
Query: 123 HSPQRLQHPQCAQLCQSLPRVPP 145
+P P Q S P PP
Sbjct: 301 SAPPSPSAPPSLQTLPSPPATPP 323
Score = 30.0 bits (66), Expect = 0.78
Identities = 37/140 (26%), Positives = 46/140 (32%), Gaps = 23/140 (16%)
Query: 10 SMRSKPFARAVPACPPT-CSPALAGPPPPSFPERAASSEGSPTHSP-------------- 54
S+ P A P PP +P L PP P + PT P
Sbjct: 510 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 569
Query: 55 PHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPS 114
P PP PP R P+ LS S P R + P +A+P P
Sbjct: 570 PGPP---PPPSR---SPSSTLSGPDLAGHSSSATSTPEELRGYDSGP--EGGAAASPPPD 621
Query: 115 AQLHAASPHSPQRLQHPQCA 134
A+L A P + R P A
Sbjct: 622 AELAACHPAAWSRGPAPPLA 641
Score = 29.3 bits (64), Expect = 1.3
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 8/149 (5%)
Query: 3 TVKCGVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQ 62
TV G + K A + A T P G P P+ R+ ++ P P R +
Sbjct: 132 TVARGKATEAPKRSALSAGARRDTSGPT-PGTPSPAMARRSRAAGTEVGLPRPAPSARPR 190
Query: 63 PPVRVVPKPTRALSTLRQLHVQPPTRSQPH----WRRTHHRSPFTRFTGSAAPTPSAQLH 118
PP K + S P R +P +R RS + T ++P S
Sbjct: 191 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 250
Query: 119 AASPHSPQRLQHPQCAQLCQSL--PRVPP 145
+P +P P+ L Q+L P+V P
Sbjct: 251 RGTPRAPAHPSQPKPKGL-QALRPPQVTP 278
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 47.8 bits (112), Expect = 4e-06
Identities = 45/150 (30%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 7 GVGSMRSKPFARAVP-----ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRL 61
G GS+R P + + P PPT S AL PPP P PP PPQ
Sbjct: 231 GGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNN 290
Query: 62 QPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAAS 121
+PPV P+P S Q PP S+P G PS+ + +
Sbjct: 291 KPPVPSTPRP----SASSQAPPPPPPPSRP---------------GPPPLPPSSSGNDET 331
Query: 122 PHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
P PQR L S P +P GP
Sbjct: 332 PRLPQR-----NLSLSSSTPPLPSPGRSGP 356
Score = 36.2 bits (82), Expect = 0.011
Identities = 36/108 (33%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 24 PPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHV 83
PP SP +GP PP ER P PP L PP P +R ST R L
Sbjct: 346 PPLPSPGRSGPLPPPPSERPP----PPVRDPPGRSGPLPPP----PPVSRNGSTSRALPA 397
Query: 84 QP--PTRSQPHWRRTHHRSPFTRFTGSAA----PTPSAQLHAASPHSP 125
P P+RS R+ R P SA P PS + SP
Sbjct: 398 TPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSP 445
Score = 34.7 bits (78), Expect = 0.032
Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 16/140 (11%)
Query: 11 MRSKPFARAVPACPPTCSPALAGPPPPSFP--ERAASSEGSPTHSP--PHPPQRLQPPVR 66
++S P R P P GP PP FP A GS SP P +PP
Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP-- 251
Query: 67 VVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQ 126
+ P P+RAL + PP ++P R P + + P PS +AS +P
Sbjct: 252 LPPTPSRALDD-KPPPPPPPVGNRPSIHREAVPPPPPQ--NNKPPVPSTPRPSASSQAPP 308
Query: 127 RLQHPQCAQLCQSLPRVPPL 146
P S P PPL
Sbjct: 309 PPPPP-------SRPGPPPL 321
Score = 28.5 bits (62), Expect = 2.3
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 11/80 (13%)
Query: 21 PACPPTCSPALAGP-PPPSFPERAASSEGSPTHSPPHPPQRLQPPVR--------VVPKP 71
P PP A P PPS P R PP P + PP R +P P
Sbjct: 127 PLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPP 186
Query: 72 TRALSTLRQLHVQPPTRSQP 91
ST R + P R P
Sbjct: 187 VP--STPRPIQSSPHNRGSP 204
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 47.8 bits (112), Expect = 4e-06
Identities = 45/150 (30%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 7 GVGSMRSKPFARAVP-----ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRL 61
G GS+R P + + P PPT S AL PPP P PP PPQ
Sbjct: 231 GGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNN 290
Query: 62 QPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAAS 121
+PPV P+P S Q PP S+P G PS+ + +
Sbjct: 291 KPPVPSTPRP----SASSQAPPPPPPPSRP---------------GPPPLPPSSSGNDET 331
Query: 122 PHSPQRLQHPQCAQLCQSLPRVPPLHHFGP 151
P PQR L S P +P GP
Sbjct: 332 PRLPQR-----NLSLSSSTPPLPSPGRSGP 356
Score = 36.2 bits (82), Expect = 0.011
Identities = 36/108 (33%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 24 PPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHV 83
PP SP +GP PP ER P PP L PP P +R ST R L
Sbjct: 346 PPLPSPGRSGPLPPPPSERPP----PPVRDPPGRSGPLPPP----PPVSRNGSTSRALPA 397
Query: 84 QP--PTRSQPHWRRTHHRSPFTRFTGSAA----PTPSAQLHAASPHSP 125
P P+RS R+ R P SA P PS + SP
Sbjct: 398 TPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSP 445
Score = 34.7 bits (78), Expect = 0.032
Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 16/140 (11%)
Query: 11 MRSKPFARAVPACPPTCSPALAGPPPPSFP--ERAASSEGSPTHSP--PHPPQRLQPPVR 66
++S P R P P GP PP FP A GS SP P +PP
Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPP-- 251
Query: 67 VVPKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQ 126
+ P P+RAL + PP ++P R P + + P PS +AS +P
Sbjct: 252 LPPTPSRALDD-KPPPPPPPVGNRPSIHREAVPPPPPQ--NNKPPVPSTPRPSASSQAPP 308
Query: 127 RLQHPQCAQLCQSLPRVPPL 146
P S P PPL
Sbjct: 309 PPPPP-------SRPGPPPL 321
Score = 28.5 bits (62), Expect = 2.3
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 11/80 (13%)
Query: 21 PACPPTCSPALAGP-PPPSFPERAASSEGSPTHSPPHPPQRLQPPVR--------VVPKP 71
P PP A P PPS P R PP P + PP R +P P
Sbjct: 127 PLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPP 186
Query: 72 TRALSTLRQLHVQPPTRSQP 91
ST R + P R P
Sbjct: 187 VP--STPRPIQSSPHNRGSP 204
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 45.4 bits (106), Expect = 2e-05
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 15/146 (10%)
Query: 19 AVPACPPTCSPALAGPPP-PSFPERAASSEGSP---THSPPHPPQ-RLQP-PVRVVPKPT 72
A P P P L P P P +R + P T P PP+ +LQP P V +P
Sbjct: 303 AQPIPQPQTEPQLRAPSPDPDLVQRTEAPPQPPPLSTQPPQGPPEAQLQPAPQPQVQRPP 362
Query: 73 RALSTLRQLHVQ-PPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAAS------PHSP 125
R S + LH PP ++ P + P + + S+ S +S P P
Sbjct: 363 RPQSPTQLLHQNLPPVQAHPSAQSLSQ--PLSAYNSSSLSLNSLSSSRSSTPAKTQPAPP 420
Query: 126 QRLQHPQCAQLCQSLPRVPPLHHFGP 151
HP + SLP PLH F P
Sbjct: 421 HISHHPSASPFPLSLPNHSPLHSFTP 446
Score = 35.4 bits (80), Expect = 0.019
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 8 VGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPP---HPPQRLQPP 64
+ S RS A+ PA P A P P S P + +PT PP H P PP
Sbjct: 404 LSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPP 463
Query: 65 VRVVPKPTRALSTLR 79
+ P P +L+
Sbjct: 464 TALPPPPPLTSGSLQ 478
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 45.4 bits (106), Expect = 2e-05
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 15/146 (10%)
Query: 19 AVPACPPTCSPALAGPPP-PSFPERAASSEGSP---THSPPHPPQ-RLQP-PVRVVPKPT 72
A P P P L P P P +R + P T P PP+ +LQP P V +P
Sbjct: 303 AQPIPQPQTEPQLRAPSPDPDLVQRTEAPPQPPPLSTQPPQGPPEAQLQPAPQPQVQRPP 362
Query: 73 RALSTLRQLHVQ-PPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAAS------PHSP 125
R S + LH PP ++ P + P + + S+ S +S P P
Sbjct: 363 RPQSPTQLLHQNLPPVQAHPSAQSLSQ--PLSAYNSSSLSLNSLSSSRSSTPAKTQPAPP 420
Query: 126 QRLQHPQCAQLCQSLPRVPPLHHFGP 151
HP + SLP PLH F P
Sbjct: 421 HISHHPSASPFPLSLPNHSPLHSFTP 446
Score = 35.4 bits (80), Expect = 0.019
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 8 VGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPP---HPPQRLQPP 64
+ S RS A+ PA P A P P S P + +PT PP H P PP
Sbjct: 404 LSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPP 463
Query: 65 VRVVPKPTRALSTLR 79
+ P P +L+
Sbjct: 464 TALPPPPPLTSGSLQ 478
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 43.9 bits (102), Expect = 5e-05
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 15/141 (10%)
Query: 7 GVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPH-----PP--- 58
G G P+ P P + PP P S + P PP PP
Sbjct: 461 GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQ 520
Query: 59 QRLQPPVRVVPKPTRALSTLRQLHVQP-PTRSQPHWRRTHHR------SPFTRFTGSAAP 111
Q QPP + P P + + Q H Q P SQP + + + +P T +A P
Sbjct: 521 QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYP 580
Query: 112 TPSAQLHAASPHSPQRLQHPQ 132
P +Q + +S QR PQ
Sbjct: 581 QPQSQQSQQTAYSQQRFPPPQ 601
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 43.9 bits (102), Expect = 5e-05
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 15/141 (10%)
Query: 7 GVGSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPH-----PP--- 58
G G P+ P P + PP P S + P PP PP
Sbjct: 461 GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQ 520
Query: 59 QRLQPPVRVVPKPTRALSTLRQLHVQP-PTRSQPHWRRTHHR------SPFTRFTGSAAP 111
Q QPP + P P + + Q H Q P SQP + + + +P T +A P
Sbjct: 521 QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYP 580
Query: 112 TPSAQLHAASPHSPQRLQHPQ 132
P +Q + +S QR PQ
Sbjct: 581 QPQSQQSQQTAYSQQRFPPPQ 601
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 42.7 bits (99), Expect = 1e-04
Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGS---PTHSPPHPPQRLQPPVRVVPKPTRALST 77
PA PP PPPP R G+ P HSPP PP R P P P R
Sbjct: 1173 PAIPPR------QPPPPKVKPRVPVPTGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPPEH 1226
Query: 78 LRQ--LHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQ 135
++QPP H S + R + +PS SP P+R +Q
Sbjct: 1227 FINCPFNLQPPPLG-----HLHRDSDWLRDISTCPNSPSTPPSTPSPRVPRRCYVLSSSQ 1281
Query: 136 LCQSLPRVPPL 146
+ P PP+
Sbjct: 1282 NNLAHPPAPPV 1292
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.7 bits (99), Expect = 1e-04
Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 22 ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQL 81
A PPT S PP S P ++ +P + P PP PP PT + +T L
Sbjct: 190 AAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPL 249
Query: 82 H--------VQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSP 125
PPT S + +P T +A PTPSA A P SP
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAP--PETTAAPPTPSATT-PAPPSSP 298
Score = 41.2 bits (95), Expect = 3e-04
Identities = 37/138 (26%), Positives = 48/138 (34%), Gaps = 22/138 (15%)
Query: 13 SKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPT 72
+ P + A PPT S PP S P ++ +P+ + PP PP PT
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 73 RALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHA-----ASPHSPQR 127
+T PP+ S P T +A PTPSA A A P +
Sbjct: 218 PPATT-----PAPPSSSAP------------PETTAAPPTPSATTPAPLSSSAPPETTAV 260
Query: 128 LQHPQCAQLCQSLPRVPP 145
P L S PP
Sbjct: 261 PPTPSATTLDPSSASAPP 278
Score = 31.6 bits (70), Expect = 0.27
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 28 SPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPT 87
S A P P+ ++ +P+ + P PP PP PT + +T PP+
Sbjct: 150 SVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATT-----QAPPS 204
Query: 88 RSQPHWRRTHHRSPFTRFTGSAAPTPSA--QLHAASPHSPQRLQHPQCAQLCQSLPRVPP 145
S P T P T A P+ SA + AA P P + VPP
Sbjct: 205 SSAP--PETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Score = 26.9 bits (58), Expect = 6.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 22 ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQP 63
A PPT S P S P ++ +P+ + P PP P
Sbjct: 259 AVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 26.6 bits (57), Expect = 8.6
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 10 SMRSKPFARAVPACPP--TCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRV 67
S + P AVP P T P+ A PP + A + + T +PP P +
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAPPET--TAAPPTPSATTPAPPSSPAPQETTAAP 307
Query: 68 VPKPTRALSTLRQLHVQPPTRSQPHWRRTHH--RSPFTRFTGSAAPT 112
+ P + +TL P S+ TH S T+ T + PT
Sbjct: 308 ITTPNSSPTTL------APDTSETSAAPTHQTTTSVTTQTTTTKQPT 348
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.7 bits (99), Expect = 1e-04
Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 22 ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQL 81
A PPT S PP S P ++ +P + P PP PP PT + +T L
Sbjct: 190 AAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPL 249
Query: 82 H--------VQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSP 125
PPT S + +P T +A PTPSA A P SP
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAP--PETTAAPPTPSATT-PAPPSSP 298
Score = 41.2 bits (95), Expect = 3e-04
Identities = 37/138 (26%), Positives = 48/138 (34%), Gaps = 22/138 (15%)
Query: 13 SKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPT 72
+ P + A PPT S PP S P ++ +P+ + PP PP PT
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 73 RALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHA-----ASPHSPQR 127
+T PP+ S P T +A PTPSA A A P +
Sbjct: 218 PPATT-----PAPPSSSAP------------PETTAAPPTPSATTPAPLSSSAPPETTAV 260
Query: 128 LQHPQCAQLCQSLPRVPP 145
P L S PP
Sbjct: 261 PPTPSATTLDPSSASAPP 278
Score = 31.6 bits (70), Expect = 0.27
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 28 SPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPT 87
S A P P+ ++ +P+ + P PP PP PT + +T PP+
Sbjct: 150 SVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATT-----QAPPS 204
Query: 88 RSQPHWRRTHHRSPFTRFTGSAAPTPSA--QLHAASPHSPQRLQHPQCAQLCQSLPRVPP 145
S P T P T A P+ SA + AA P P + VPP
Sbjct: 205 SSAP--PETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Score = 26.9 bits (58), Expect = 6.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 22 ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQP 63
A PPT S P S P ++ +P+ + P PP P
Sbjct: 259 AVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 26.6 bits (57), Expect = 8.6
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 10 SMRSKPFARAVPACPP--TCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRV 67
S + P AVP P T P+ A PP + A + + T +PP P +
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAPPET--TAAPPTPSATTPAPPSSPAPQETTAAP 307
Query: 68 VPKPTRALSTLRQLHVQPPTRSQPHWRRTHH--RSPFTRFTGSAAPT 112
+ P + +TL P S+ TH S T+ T + PT
Sbjct: 308 ITTPNSSPTTL------APDTSETSAAPTHQTTTSVTTQTTTTKQPT 348
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.7 bits (99), Expect = 1e-04
Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 22 ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQL 81
A PPT S PP S P ++ +P + P PP PP PT + +T L
Sbjct: 190 AAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPL 249
Query: 82 H--------VQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSP 125
PPT S + +P T +A PTPSA A P SP
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAP--PETTAAPPTPSATT-PAPPSSP 298
Score = 41.2 bits (95), Expect = 3e-04
Identities = 37/138 (26%), Positives = 48/138 (34%), Gaps = 22/138 (15%)
Query: 13 SKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPT 72
+ P + A PPT S PP S P ++ +P+ + PP PP PT
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 73 RALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHA-----ASPHSPQR 127
+T PP+ S P T +A PTPSA A A P +
Sbjct: 218 PPATT-----PAPPSSSAP------------PETTAAPPTPSATTPAPLSSSAPPETTAV 260
Query: 128 LQHPQCAQLCQSLPRVPP 145
P L S PP
Sbjct: 261 PPTPSATTLDPSSASAPP 278
Score = 31.6 bits (70), Expect = 0.27
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 9/120 (7%)
Query: 28 SPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPT 87
S A P P+ ++ +P+ + P PP PP PT + +T PP+
Sbjct: 150 SVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATT-----QAPPS 204
Query: 88 RSQPHWRRTHHRSPFTRFTGSAAPTPSA--QLHAASPHSPQRLQHPQCAQLCQSLPRVPP 145
S P T P T A P+ SA + AA P P + VPP
Sbjct: 205 SSAP--PETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Score = 26.9 bits (58), Expect = 6.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 22 ACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQP 63
A PPT S P S P ++ +P+ + P PP P
Sbjct: 259 AVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 26.6 bits (57), Expect = 8.6
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 10 SMRSKPFARAVPACPP--TCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRV 67
S + P AVP P T P+ A PP + A + + T +PP P +
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAPPET--TAAPPTPSATTPAPPSSPAPQETTAAP 307
Query: 68 VPKPTRALSTLRQLHVQPPTRSQPHWRRTHH--RSPFTRFTGSAAPT 112
+ P + +TL P S+ TH S T+ T + PT
Sbjct: 308 ITTPNSSPTTL------APDTSETSAAPTHQTTTSVTTQTTTTKQPT 348
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/108 (28%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 15 PFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRA 74
P P+ PP P PPPP P P SPP PP Q P P
Sbjct: 405 PLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPP--AQEEQEESPPPVVP 462
Query: 75 LSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASP 122
+ R+ P T SQ R P G++ PTP+ P
Sbjct: 463 ATCSRKRGRPPLTPSQRAEREAARAGP----EGTSPPTPTPSTATGGP 506
Score = 30.0 bits (66), Expect = 0.78
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 14/58 (24%)
Query: 34 PPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRSQP 91
PPPP P +P+ PP PP PP + P P +S PP S P
Sbjct: 402 PPPPLTPP-------APSPPPPLPPPSTSPPPPLCPPPPPPVS-------PPPLPSPP 445
Score = 29.6 bits (65), Expect = 1.0
Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 13 SKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPP-----QRLQPPVRV 67
S P P PP P L PPPP E E SP PP P +R +PP+
Sbjct: 423 SPPPPLCPPPPPPVSPPPLPSPPPPPAQE---EQEESP---PPVVPATCSRKRGRPPLTP 476
Query: 68 VPKPTRALSTLRQLHVQPPT 87
+ R + PPT
Sbjct: 477 SQRAEREAARAGPEGTSPPT 496
Score = 29.3 bits (64), Expect = 1.3
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 31 LAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKP------TRALSTLRQLHVQ 84
L P PS + G P P PP+R + P + P+P + L T QL V
Sbjct: 1885 LPSPGSPSSLTHHIPTVGDPDF--PAPPRRSRRPSPLAPRPPPSRWASPPLKTSPQLRVP 1942
Query: 85 PPT 87
PPT
Sbjct: 1943 PPT 1945
Score = 27.3 bits (59), Expect = 5.0
Identities = 38/134 (28%), Positives = 50/134 (37%), Gaps = 21/134 (15%)
Query: 21 PACPPTC--SPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTL 78
P PP SP L P S P E +P P PP+ PP VP P + S L
Sbjct: 551 PPKPPKVEVSPVLRPPITTSPP---VPQEPAPV---PSPPRAPTPPSTPVPLPEKRRSIL 604
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCA---- 134
R +P R R P + +P P+ A S P L+ PQ
Sbjct: 605 R----EPTFRWTSLTRELPPPPPAPPPPPAPSPPPAP---ATSSRRPLLLRAPQFTPSEA 657
Query: 135 --QLCQSLPRVPPL 146
++ +S+ PPL
Sbjct: 658 HLKIYESVLTPPPL 671
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 42.0 bits (97), Expect = 2e-04
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 13 SKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSP----THSPPHPPQRLQPPVRVV 68
S P R PP A PPPP P+R AS P +HSPP P QR P V
Sbjct: 597 SPPIQRRYSPSPPP-KRRTASPPPP--PKRRASPSPPPKRRVSHSPP-PKQRSSP---VT 649
Query: 69 PKPTRALSTLRQLHVQPPTRSQ----PHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHS 124
+ + +LS+ + P ++ P + H SP R +++ P + A+S S
Sbjct: 650 KRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS--S 707
Query: 125 PQRLQHP 131
PQR Q P
Sbjct: 708 PQRRQSP 714
Score = 36.6 bits (83), Expect = 0.008
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 28 SPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTL----RQLHV 83
SP+ + P P ++ S G SP PP R + P P R + R+
Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPS 583
Query: 84 QPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQR 127
PP R P RR + P R +P+P + ASP P +
Sbjct: 584 PPPRRRSPSPRR--YSPPIQR---RYSPSPPPKRRTASPPPPPK 622
Score = 35.0 bits (79), Expect = 0.024
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 13/123 (10%)
Query: 18 RAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALST 77
R P+ PPT P PP P R + P P P PP R P P R
Sbjct: 547 RRSPSPPPTRRRRSPSPAPP--PRRRRTPTPPPRRRTPSP-----PPRRRSPSPRRYSPP 599
Query: 78 LRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLC 137
+++ + P P RRT P + S +P P ++ + P P++ P +
Sbjct: 600 IQRRYSPSP----PPKRRTASPPPPPKRRASPSPPPKRRVSHSPP--PKQRSSPVTKRRS 653
Query: 138 QSL 140
SL
Sbjct: 654 PSL 656
Score = 30.8 bits (68), Expect = 0.46
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 42 RAASSEGSPTHSPP---HPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRSQPHWRRTHH 98
R+ + SP+H+ P H + R P P R S R+ PP R P R
Sbjct: 285 RSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRT---PPRRMPPPPRHRRS 341
Query: 99 RSPFTR-------FTGSAAPTPSAQLHAASPHSPQRLQHP 131
RSP R +GS++ + S++ + P+R P
Sbjct: 342 RSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP 381
Score = 29.6 bits (65), Expect = 1.0
Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 9 GSMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVV 68
GS S +R+ PP P PP + S+ P PP P R
Sbjct: 357 GSSSSSSSSRS--RSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS 414
Query: 69 PKPTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTP 113
P P ++ T + P R+ + T H+ R + S AP P
Sbjct: 415 PTPQQSNRTRKSRVSVSPGRTS--GKVTKHKGTEKRESPSPAPKP 457
Score = 28.9 bits (63), Expect = 1.7
Identities = 31/134 (23%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 12 RSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKP 71
RS P + P S G P A S + + HSP P+ P P P
Sbjct: 644 RSSPVTKR--RSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRA--PQTSSSPPP 699
Query: 72 TRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHP 131
R ++ Q P+ S RR + +A+P+P + +S S P
Sbjct: 700 VRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEP 759
Query: 132 QCAQLCQSLPRVPP 145
+ P PP
Sbjct: 760 AAKK-----PPAPP 768
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 41.6 bits (96), Expect = 3e-04
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 12/97 (12%)
Query: 7 GVGSMR-SKPFARAVPACPPTCSPALAGP--PPPSFPERAASSEGSPTHSPPHPPQRLQP 63
GVG + S+ RA P +PA A P P P+ R P P PP +P
Sbjct: 266 GVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRP 325
Query: 64 PVRVVPKPTRALSTLRQLHVQPPTR-SQPHWRRTHHR 99
P P P RA S PPTR +P RR+ R
Sbjct: 326 PPATAPSPRRAGS--------PPTREEEPRPRRSAAR 354
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 40.8 bits (94), Expect = 4e-04
Identities = 46/133 (34%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 21 PACPPTCSPALAGP-PPPSFPERAASSEGSPTHSP-PHPPQRLQPPVRVVPKPTRALSTL 78
P+ P +P L P P PS A +GSPT S P+ PQ PV P +
Sbjct: 197 PSSAPPGTPQLPTPGPTPS--ATAVPPQGSPTASQAPNQPQAPTAPV-----PHTHIQQA 249
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQ 138
LH Q P P + H P TGSA PSA HA P Q P
Sbjct: 250 PALHPQRPPSPHPPPHPSPH-PPLQPLTGSAGQ-PSAPSHAQPPLHGQGPPGPH------ 301
Query: 139 SLPRVPPLHHFGP 151
SL P L H GP
Sbjct: 302 SLQAGPLLQHPGP 314
Score = 37.0 bits (84), Expect = 0.006
Identities = 43/151 (28%), Positives = 52/151 (34%), Gaps = 19/151 (12%)
Query: 15 PFARAVPAC-PPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTR 73
P A AVP PT S A P P+ P + +P P PP PP P +
Sbjct: 214 PSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ 273
Query: 74 ALS-----TLRQLHVQPPTRSQ-PHWRRTHHRSPFTRFTGSAAP---TPSAQL------- 117
L+ H QPP Q P + P + G P P A
Sbjct: 274 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGT 333
Query: 118 --HAASPHSPQRLQHPQCAQLCQSLPRVPPL 146
AA PH+ +L Q A Q PR PL
Sbjct: 334 SPAAAYPHTSLQLPASQSALQSQQPPREQPL 364
Score = 34.3 bits (77), Expect = 0.041
Identities = 36/122 (29%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 24 PPTCSPALAGPPPP-SFP-ERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLR-- 79
P SPA A P P ++A P P PP L P + P PT + L
Sbjct: 330 PLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP-HIKPPPTTPIPQLPAP 388
Query: 80 QLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQS 139
Q H PP S P SPF+ P L + S H P P + QS
Sbjct: 389 QAHKHPPHLSGP--------SPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 440
Query: 140 LP 141
P
Sbjct: 441 QP 442
Score = 33.5 bits (75), Expect = 0.070
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 23/106 (21%)
Query: 34 PPPPSFPERAASSEGSPTHSPPH---PPQRLQPPVRVVP-KPTRALSTLRQLHVQPPTRS 89
PPPP+ ++ S TH PP PP +L P + +P P + + ++ PP S
Sbjct: 410 PPPPALKPLSSLS----THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 465
Query: 90 QPHWRRTHHRSPFTRFTG--SAAPTPSAQLHAASPHSPQRLQHPQC 133
P TG AP P H P P + P C
Sbjct: 466 HPP-------------TGLHQVAPQPPFAQHPFVPGGPPPITPPTC 498
Score = 32.0 bits (71), Expect = 0.20
Identities = 39/138 (28%), Positives = 45/138 (32%), Gaps = 23/138 (16%)
Query: 35 PPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRS----Q 90
P P E + S PP LQ P V P P+ A QL PT S
Sbjct: 162 PSPQDNESDSDSSAQQQMLQAQPPA-LQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVP 220
Query: 91 PHWRRTHHRSPFTRFTGSAAPTP------SAQLHAASPHSPQRLQHPQCAQLCQSLP--- 141
P T ++P + AP P + LH P SP HP Q L
Sbjct: 221 PQGSPTASQAP-NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSA 279
Query: 142 --------RVPPLHHFGP 151
PPLH GP
Sbjct: 280 GQPSAPSHAQPPLHGQGP 297
Score = 29.3 bits (64), Expect = 1.3
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 25 PTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPV----------RVVPKPTRA 74
P P AGP FP + PPH + L+ PV +P P A
Sbjct: 900 PLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSA 959
Query: 75 LSTLRQLHVQ 84
L+ +H Q
Sbjct: 960 AHQLQAMHAQ 969
Score = 28.9 bits (63), Expect = 1.7
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 26/84 (30%)
Query: 21 PACPPTCSPALAGPPPPSFP--ERAASSEGS---------PT--------------HSPP 55
P CP T +P AGP + P AA+S GS PT SPP
Sbjct: 496 PTCPSTSTPP-AGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 554
Query: 56 HPPQRLQPPVRVVPKPTRALSTLR 79
PP+ P VV P+ A + R
Sbjct: 555 PPPRSPSPEPTVVDTPSHASQSAR 578
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALST-LR 79
PA P S + PP P + P S P P L + P P T L
Sbjct: 413 PALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLH 472
Query: 80 QLHVQPPTRSQP 91
Q+ QPP P
Sbjct: 473 QVAPQPPFAQHP 484
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.8 bits (94), Expect = 4e-04
Identities = 46/133 (34%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 21 PACPPTCSPALAGP-PPPSFPERAASSEGSPTHSP-PHPPQRLQPPVRVVPKPTRALSTL 78
P+ P +P L P P PS A +GSPT S P+ PQ PV P +
Sbjct: 751 PSSAPPGTPQLPTPGPTPS--ATAVPPQGSPTASQAPNQPQAPTAPV-----PHTHIQQA 803
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQ 138
LH Q P P + H P TGSA PSA HA P Q P
Sbjct: 804 PALHPQRPPSPHPPPHPSPH-PPLQPLTGSAGQ-PSAPSHAQPPLHGQGPPGPH------ 855
Query: 139 SLPRVPPLHHFGP 151
SL P L H GP
Sbjct: 856 SLQAGPLLQHPGP 868
Score = 37.0 bits (84), Expect = 0.006
Identities = 43/151 (28%), Positives = 52/151 (34%), Gaps = 19/151 (12%)
Query: 15 PFARAVPAC-PPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTR 73
P A AVP PT S A P P+ P + +P P PP PP P +
Sbjct: 768 PSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ 827
Query: 74 ALS-----TLRQLHVQPPTRSQ-PHWRRTHHRSPFTRFTGSAAP---TPSAQL------- 117
L+ H QPP Q P + P + G P P A
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGT 887
Query: 118 --HAASPHSPQRLQHPQCAQLCQSLPRVPPL 146
AA PH+ +L Q A Q PR PL
Sbjct: 888 SPAAAYPHTSLQLPASQSALQSQQPPREQPL 918
Score = 34.3 bits (77), Expect = 0.041
Identities = 36/122 (29%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 24 PPTCSPALAGPPPP-SFP-ERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLR-- 79
P SPA A P P ++A P P PP L P + P PT + L
Sbjct: 884 PLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP-HIKPPPTTPIPQLPAP 942
Query: 80 QLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQS 139
Q H PP S P SPF+ P L + S H P P + QS
Sbjct: 943 QAHKHPPHLSGP--------SPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 994
Query: 140 LP 141
P
Sbjct: 995 QP 996
Score = 33.5 bits (75), Expect = 0.070
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 23/106 (21%)
Query: 34 PPPPSFPERAASSEGSPTHSPPH---PPQRLQPPVRVVP-KPTRALSTLRQLHVQPPTRS 89
PPPP+ ++ S TH PP PP +L P + +P P + + ++ PP S
Sbjct: 964 PPPPALKPLSSLS----THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 1019
Query: 90 QPHWRRTHHRSPFTRFTG--SAAPTPSAQLHAASPHSPQRLQHPQC 133
P TG AP P H P P + P C
Sbjct: 1020 HPP-------------TGLHQVAPQPPFAQHPFVPGGPPPITPPTC 1052
Score = 32.0 bits (71), Expect = 0.20
Identities = 39/138 (28%), Positives = 45/138 (32%), Gaps = 23/138 (16%)
Query: 35 PPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRS----Q 90
P P E + S PP LQ P V P P+ A QL PT S
Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPA-LQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVP 774
Query: 91 PHWRRTHHRSPFTRFTGSAAPTP------SAQLHAASPHSPQRLQHPQCAQLCQSLP--- 141
P T ++P + AP P + LH P SP HP Q L
Sbjct: 775 PQGSPTASQAP-NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSA 833
Query: 142 --------RVPPLHHFGP 151
PPLH GP
Sbjct: 834 GQPSAPSHAQPPLHGQGP 851
Score = 29.3 bits (64), Expect = 1.3
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 25 PTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPV----------RVVPKPTRA 74
P P AGP FP + PPH + L+ PV +P P A
Sbjct: 1454 PLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSA 1513
Query: 75 LSTLRQLHVQ 84
L+ +H Q
Sbjct: 1514 AHQLQAMHAQ 1523
Score = 28.9 bits (63), Expect = 1.7
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 26/84 (30%)
Query: 21 PACPPTCSPALAGPPPPSFP--ERAASSEGS---------PT--------------HSPP 55
P CP T +P AGP + P AA+S GS PT SPP
Sbjct: 1050 PTCPSTSTPP-AGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 56 HPPQRLQPPVRVVPKPTRALSTLR 79
PP+ P VV P+ A + R
Sbjct: 1109 PPPRSPSPEPTVVDTPSHASQSAR 1132
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALST-LR 79
PA P S + PP P + P S P P L + P P T L
Sbjct: 967 PALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLH 1026
Query: 80 QLHVQPPTRSQP 91
Q+ QPP P
Sbjct: 1027 QVAPQPPFAQHP 1038
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.8 bits (94), Expect = 4e-04
Identities = 46/133 (34%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 21 PACPPTCSPALAGP-PPPSFPERAASSEGSPTHSP-PHPPQRLQPPVRVVPKPTRALSTL 78
P+ P +P L P P PS A +GSPT S P+ PQ PV P +
Sbjct: 751 PSSAPPGTPQLPTPGPTPS--ATAVPPQGSPTASQAPNQPQAPTAPV-----PHTHIQQA 803
Query: 79 RQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQ 138
LH Q P P + H P TGSA PSA HA P Q P
Sbjct: 804 PALHPQRPPSPHPPPHPSPH-PPLQPLTGSAGQ-PSAPSHAQPPLHGQGPPGPH------ 855
Query: 139 SLPRVPPLHHFGP 151
SL P L H GP
Sbjct: 856 SLQAGPLLQHPGP 868
Score = 37.0 bits (84), Expect = 0.006
Identities = 43/151 (28%), Positives = 52/151 (34%), Gaps = 19/151 (12%)
Query: 15 PFARAVPAC-PPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTR 73
P A AVP PT S A P P+ P + +P P PP PP P +
Sbjct: 768 PSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ 827
Query: 74 ALS-----TLRQLHVQPPTRSQ-PHWRRTHHRSPFTRFTGSAAP---TPSAQL------- 117
L+ H QPP Q P + P + G P P A
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGT 887
Query: 118 --HAASPHSPQRLQHPQCAQLCQSLPRVPPL 146
AA PH+ +L Q A Q PR PL
Sbjct: 888 SPAAAYPHTSLQLPASQSALQSQQPPREQPL 918
Score = 34.3 bits (77), Expect = 0.041
Identities = 36/122 (29%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 24 PPTCSPALAGPPPP-SFP-ERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLR-- 79
P SPA A P P ++A P P PP L P + P PT + L
Sbjct: 884 PLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP-HIKPPPTTPIPQLPAP 942
Query: 80 QLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQS 139
Q H PP S P SPF+ P L + S H P P + QS
Sbjct: 943 QAHKHPPHLSGP--------SPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 994
Query: 140 LP 141
P
Sbjct: 995 QP 996
Score = 33.5 bits (75), Expect = 0.070
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 23/106 (21%)
Query: 34 PPPPSFPERAASSEGSPTHSPPH---PPQRLQPPVRVVP-KPTRALSTLRQLHVQPPTRS 89
PPPP+ ++ S TH PP PP +L P + +P P + + ++ PP S
Sbjct: 964 PPPPALKPLSSLS----THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 1019
Query: 90 QPHWRRTHHRSPFTRFTG--SAAPTPSAQLHAASPHSPQRLQHPQC 133
P TG AP P H P P + P C
Sbjct: 1020 HPP-------------TGLHQVAPQPPFAQHPFVPGGPPPITPPTC 1052
Score = 32.0 bits (71), Expect = 0.20
Identities = 39/138 (28%), Positives = 45/138 (32%), Gaps = 23/138 (16%)
Query: 35 PPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRS----Q 90
P P E + S PP LQ P V P P+ A QL PT S
Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPA-LQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVP 774
Query: 91 PHWRRTHHRSPFTRFTGSAAPTP------SAQLHAASPHSPQRLQHPQCAQLCQSLP--- 141
P T ++P + AP P + LH P SP HP Q L
Sbjct: 775 PQGSPTASQAP-NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSA 833
Query: 142 --------RVPPLHHFGP 151
PPLH GP
Sbjct: 834 GQPSAPSHAQPPLHGQGP 851
Score = 29.3 bits (64), Expect = 1.3
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 25 PTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPV----------RVVPKPTRA 74
P P AGP FP + PPH + L+ PV +P P A
Sbjct: 1454 PLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSA 1513
Query: 75 LSTLRQLHVQ 84
L+ +H Q
Sbjct: 1514 AHQLQAMHAQ 1523
Score = 28.9 bits (63), Expect = 1.7
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 26/84 (30%)
Query: 21 PACPPTCSPALAGPPPPSFP--ERAASSEGS---------PT--------------HSPP 55
P CP T +P AGP + P AA+S GS PT SPP
Sbjct: 1050 PTCPSTSTPP-AGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 56 HPPQRLQPPVRVVPKPTRALSTLR 79
PP+ P VV P+ A + R
Sbjct: 1109 PPPRSPSPEPTVVDTPSHASQSAR 1132
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALST-LR 79
PA P S + PP P + P S P P L + P P T L
Sbjct: 967 PALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLH 1026
Query: 80 QLHVQPPTRSQP 91
Q+ QPP P
Sbjct: 1027 QVAPQPPFAQHP 1038
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 6e-04
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 21 PACPPTCSPALAGPPPPSFPER---AASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALST 77
P PP+ + PP PE+ ++SSE SP P R PKP A +
Sbjct: 390 PVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGS 449
Query: 78 LRQLHVQPPTRSQPHWR----RTHHRSPFTRFTGSAAP-----------TPSAQLHAASP 122
R++ P ++++ H R ++H +P R S +P TP+ + H+ S
Sbjct: 450 HREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRS- 508
Query: 123 HSPQ 126
SPQ
Sbjct: 509 RSPQ 512
Score = 26.9 bits (58), Expect = 6.6
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 11 MRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSP-PHPPQRLQPPVRVVP 69
++ KP A SP P P + P R+ S S P P + P
Sbjct: 1604 VKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPP 1663
Query: 70 KPTRALSTLRQLHVQPPTRSQ-PHWRRTHHRSP-------FTRFTGSAAPTPSAQLHAAS 121
K A R +P T+S+ P RR+ SP +R + SA+ +P +
Sbjct: 1664 KSRTARRGSRS-SPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPP 1722
Query: 122 PH--SPQRLQHPQCAQLCQSLPR 142
H SP + P+ A+ +S R
Sbjct: 1723 RHRRSPS-VSSPEPAEKSRSSRR 1744
>gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens]
Length = 368
Score = 40.0 bits (92), Expect = 8e-04
Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 27 CSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPP 86
CS A GPP SFP PP PP LQPP +P+R P
Sbjct: 236 CSTATPGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRG-------DGPPA 288
Query: 87 TRSQPHWRRT-HHRSPFTRFTGSAAPTPSAQL 117
SQP R+ P TR G++ PTP +
Sbjct: 289 VSSQPSGGRSLGEEGPPTR--GASPPTPPVSI 318
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 24 PPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRAL 75
PP PA A PPPP P +S +P PP PP P PT AL
Sbjct: 72 PPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPAL 123
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/115 (31%), Positives = 37/115 (32%), Gaps = 24/115 (20%)
Query: 14 KPFARAVPACPPTCSPALAGPPPP---SFPERAASSEGSPTHSPPHPPQRLQPPVRVVPK 70
KP PA PP P + PPPP F SP PPHP PP P
Sbjct: 313 KPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPP--PPPP 370
Query: 71 PTRALSTLRQLHVQPPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSP 125
P TL PP SQP TG A P P P P
Sbjct: 371 PAADYPTL-----PPPPLSQP--------------TGGAPPPPPPPPPPGPPPPP 406
Score = 29.6 bits (65), Expect = 1.0
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 13 SKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPP 55
S+P A P PP P GPPPP F ++G P PP
Sbjct: 384 SQPTGGAPPPPPPPPPP---GPPPPPF----TGADGQPAIPPP 419
Score = 28.5 bits (62), Expect = 2.3
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 10/70 (14%)
Query: 16 FARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPP----------QRLQPPV 65
FA P PP + PPPP + P PP PP + PP+
Sbjct: 361 FAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPL 420
Query: 66 RVVPKPTRAL 75
KP +L
Sbjct: 421 SDTTKPKSSL 430
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 29 PALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTR 88
P LA P + P+ S+ GSP+ + P PP P P L Q ++ PTR
Sbjct: 971 PELAAPGEDAEPQAGPSARGSPSPAAPGPP--------AGPLPRMDLPLAGQ-PLRHPTR 1021
Query: 89 SQPHWRRTHHRSP 101
++P RR HH P
Sbjct: 1022 ARPRPRRQHHHRP 1034
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 16/69 (23%)
Query: 18 RAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALST 77
+A P+ + SPA GPP P G P L+ P R P+P
Sbjct: 983 QAGPSARGSPSPAAPGPPAGPLPRMDLPLAGQP----------LRHPTRARPRPR----- 1027
Query: 78 LRQLHVQPP 86
RQ H +PP
Sbjct: 1028 -RQHHHRPP 1035
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 39.3 bits (90), Expect = 0.001
Identities = 41/130 (31%), Positives = 52/130 (40%), Gaps = 18/130 (13%)
Query: 10 SMRSKPFARAVPACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVP 69
S+R+ PF P PP P P P RAA G P P P+ PP+ +
Sbjct: 800 SLRTGPFQP--PFLPPARRPRSLQESPA--PRRAAGRLGPPGSPLPGSPRPPSPPLGLCH 855
Query: 70 KPTRALSTL--RQLHV-----QPPTRS-QPHWRRTHHRSPFTRFTGSAAPTPSAQLHAAS 121
P R+ L R H +PPTR+ +P R HR P R AP H S
Sbjct: 856 SPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPP--RAGAWRAPLE----HRES 909
Query: 122 PHSPQRLQHP 131
P P+ + P
Sbjct: 910 PREPEDSETP 919
Score = 30.0 bits (66), Expect = 0.78
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 14 KPFARAVPACPPTCSPALAGPPPPSFP----ERAASSEGSPTHSPPHP 57
+P + P PP SPAL+G P P+ P R +P H PP P
Sbjct: 668 RPPSSGPPPAPPL-SPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAP 714
Score = 28.1 bits (61), Expect = 3.0
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 35 PPPSFPERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRSQPH-W 93
PP +P A S G + PP P + VP PT L + P +
Sbjct: 939 PPSPWPGGAGSRRGF-SRPPPVPENPFLQLLGPVPSPT--------LQPEDPAADMTRVF 989
Query: 94 RRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQ 126
HH + T SA PTP A+ PQ
Sbjct: 990 LGRHHEPGPGQLTKSAGPTPEKPEEEATLGDPQ 1022
Score = 26.9 bits (58), Expect = 6.6
Identities = 28/104 (26%), Positives = 35/104 (33%), Gaps = 22/104 (21%)
Query: 35 PPPSFPERAASSEGSPTHSPPHPPQ----------RLQPPVRVVPKPTRALSTLRQLHVQ 84
PP P S S SPP PP+ L P + +P+P +LR
Sbjct: 644 PPAPQPAPRTLSHWSALLSPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLR----- 698
Query: 85 PPTRSQPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRL 128
R P W H P + + A P A SP P L
Sbjct: 699 ---RHPPPWAAPAHVPPAPQASWWAFVEPP----AVSPEVPPDL 735
Score = 26.9 bits (58), Expect = 6.6
Identities = 36/137 (26%), Positives = 48/137 (35%), Gaps = 14/137 (10%)
Query: 21 PACPPTCSPALAGPPPPSFPERAASSEGSPTHSPPHPPQRLQP-----PVRVVPKPTRAL 75
P PP P +GPPP P + + G P + P+ R P P V P P +
Sbjct: 663 PPVPPR--PPSSGPPPA--PPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASW 718
Query: 76 STLRQLHVQPPTRS-QPHWRRTHHRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCA 134
V+PP S + P F GS + ASP + +R A
Sbjct: 719 WAF----VEPPAVSPEVPPDLLAFPGPRPSFRGSRRRGAAFGFPGASPRASRRRAWSPLA 774
Query: 135 QLCQSLPRVPPLHHFGP 151
SL P L + P
Sbjct: 775 SPQPSLRSSPGLGYCSP 791
>gi|117306178 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 39.3 bits (90), Expect = 0.001
Identities = 35/113 (30%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Query: 40 PERAASSEGSPTHSPPHPPQRLQPPVRVVPKPTRALSTLRQLHVQPPTRSQP--HWRRTH 97
P ++ + T + P + PPV P T A STL Q R Q H +
Sbjct: 108 PAKSILKDFDGTRARLLPEAIMNPPV--APYATVAPSTLAHPQAQALARQQALQHAQTLA 165
Query: 98 HRSPFTRFTGSAAPTPSAQLHAASPHSPQRLQHPQCAQLCQSLPRVPPLHHFG 150
H P T P P A H S PQ L HPQ Q L L H G
Sbjct: 166 HAPPQTLQHPQGIPPPQALSHPQSLQQPQGLGHPQPMAQTQGLVHPQALAHQG 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,603,514
Number of Sequences: 37866
Number of extensions: 650351
Number of successful extensions: 11335
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 989
Number of HSP's that attempted gapping in prelim test: 6224
Number of HSP's gapped (non-prelim): 4469
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.