Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 87298836

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1
[Homo sapiens]
         (315 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...   645   0.0  
gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...   645   0.0  
gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...   584   e-167
gi|23199998 NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...   478   e-135
gi|8922322 NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...   434   e-122
gi|88758572 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]     281   4e-76
gi|88758570 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]     281   4e-76
gi|21717803 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]     281   4e-76
gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]                 77   2e-14
gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]                 77   2e-14
gi|187828635 NOL1/NOP2/Sun domain family, member 7 [Homo sapiens]      75   8e-14
gi|39995082 NOL1/NOP2/Sun domain family, member 2 [Homo sapiens]       49   4e-06
gi|32698918 NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]       44   1e-04
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]            35   0.11 
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ...    35   0.11 
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ...    35   0.11 
gi|71274172 ankyrin repeat domain 56 [Homo sapiens]                    34   0.15 
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  33   0.25 
gi|221219026 pleckstrin homology-like domain, family B, member 1...    33   0.43 
gi|221219024 pleckstrin homology-like domain, family B, member 1...    33   0.43 
gi|38424073 pleckstrin homology-like domain, family B, member 1 ...    33   0.43 
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    32   0.56 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    32   0.56 
gi|239751436 PREDICTED: hypothetical protein [Homo sapiens]            32   0.73 
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]            32   0.96 
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]            32   0.96 
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]            32   0.96 
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]        32   0.96 
gi|59710104 plexin A3 [Homo sapiens]                                   32   0.96 
gi|239756949 PREDICTED: hypothetical protein [Homo sapiens]            31   1.3  

>gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
           sapiens]
          Length = 315

 Score =  645 bits (1665), Expect = 0.0
 Identities = 315/315 (100%), Positives = 315/315 (100%)

Query: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL
Sbjct: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60

Query: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
           AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL
Sbjct: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120

Query: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180
           DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE
Sbjct: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180

Query: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240
           ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER
Sbjct: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240

Query: 241 VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS 300
           VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS
Sbjct: 241 VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS 300

Query: 301 PWKTLGPHRRQQFAF 315
           PWKTLGPHRRQQFAF
Sbjct: 301 PWKTLGPHRRQQFAF 315


>gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
           sapiens]
          Length = 315

 Score =  645 bits (1665), Expect = 0.0
 Identities = 315/315 (100%), Positives = 315/315 (100%)

Query: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL
Sbjct: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60

Query: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
           AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL
Sbjct: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120

Query: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180
           DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE
Sbjct: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180

Query: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240
           ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER
Sbjct: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240

Query: 241 VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS 300
           VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS
Sbjct: 241 VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS 300

Query: 301 PWKTLGPHRRQQFAF 315
           PWKTLGPHRRQQFAF
Sbjct: 301 PWKTLGPHRRQQFAF 315


>gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Homo
           sapiens]
          Length = 291

 Score =  584 bits (1506), Expect = e-167
 Identities = 291/315 (92%), Positives = 291/315 (92%), Gaps = 24/315 (7%)

Query: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL
Sbjct: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60

Query: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
           AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL
Sbjct: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120

Query: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180
           DPSCSGSGMPSRQLEEPGAGTPSP                        RLVYSMCSLCQE
Sbjct: 121 DPSCSGSGMPSRQLEEPGAGTPSP------------------------RLVYSMCSLCQE 156

Query: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240
           ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER
Sbjct: 157 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 216

Query: 241 VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS 300
           VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS
Sbjct: 217 VEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSS 276

Query: 301 PWKTLGPHRRQQFAF 315
           PWKTLGPHRRQQFAF
Sbjct: 277 PWKTLGPHRRQQFAF 291


>gi|23199998 NOL1/NOP2/Sun domain family, member 5 isoform 1 [Homo
           sapiens]
          Length = 466

 Score =  478 bits (1230), Expect = e-135
 Identities = 240/268 (89%), Positives = 247/268 (92%)

Query: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDP               KTSHL
Sbjct: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244

Query: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
           AALLKNQGKIFAFDLDA+RLASMATLLA AGVSCCELAEEDFLAVSP DPRY EVHY+LL
Sbjct: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 304

Query: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180
           DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQE
Sbjct: 305 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 364

Query: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240
           ENED+V+DALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIER
Sbjct: 365 ENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424

Query: 241 VEMPTSASQAKASAPERTPSPAPKRKKR 268
           VE+P+SASQAKASAPERTPSPAPKRKKR
Sbjct: 425 VEVPSSASQAKASAPERTPSPAPKRKKR 452


>gi|8922322 NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo
           sapiens]
          Length = 429

 Score =  434 bits (1115), Expect = e-122
 Identities = 217/244 (88%), Positives = 223/244 (91%)

Query: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDP               KTSHL
Sbjct: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244

Query: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
           AALLKNQGKIFAFDLDA+RLASMATLLA AGVSCCELAEEDFLAVSP DPRY EVHY+LL
Sbjct: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 304

Query: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180
           DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQE
Sbjct: 305 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 364

Query: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240
           ENED+V+DALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIER
Sbjct: 365 ENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424

Query: 241 VEMP 244
           VE+P
Sbjct: 425 VEVP 428


>gi|88758572 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]
          Length = 154

 Score =  281 bits (720), Expect = 4e-76
 Identities = 138/140 (98%), Positives = 139/140 (99%)

Query: 129 MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVQD 188
           MPSRQLE+PGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMV D
Sbjct: 1   MPSRQLEDPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPD 60

Query: 189 ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 248
           ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS
Sbjct: 61  ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 120

Query: 249 QAKASAPERTPSPAPKRKKR 268
           QAKASAPERTPSPAPKRKKR
Sbjct: 121 QAKASAPERTPSPAPKRKKR 140


>gi|88758570 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]
          Length = 154

 Score =  281 bits (720), Expect = 4e-76
 Identities = 138/140 (98%), Positives = 139/140 (99%)

Query: 129 MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVQD 188
           MPSRQLE+PGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMV D
Sbjct: 1   MPSRQLEDPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPD 60

Query: 189 ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 248
           ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS
Sbjct: 61  ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 120

Query: 249 QAKASAPERTPSPAPKRKKR 268
           QAKASAPERTPSPAPKRKKR
Sbjct: 121 QAKASAPERTPSPAPKRKKR 140


>gi|21717803 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]
          Length = 154

 Score =  281 bits (720), Expect = 4e-76
 Identities = 138/140 (98%), Positives = 139/140 (99%)

Query: 129 MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVQD 188
           MPSRQLE+PGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMV D
Sbjct: 1   MPSRQLEDPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPD 60

Query: 189 ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 248
           ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS
Sbjct: 61  ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 120

Query: 249 QAKASAPERTPSPAPKRKKR 268
           QAKASAPERTPSPAPKRKKR
Sbjct: 121 QAKASAPERTPSPAPKRKKR 140


>gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]
          Length = 808

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 85/295 (28%), Positives = 125/295 (42%), Gaps = 35/295 (11%)

Query: 4   LLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHLAAL 63
           L+V+ +   +   P Y AGH +LQ  +S LP M L P++             KTS++A L
Sbjct: 342 LVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQL 401

Query: 64  LKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLLDPS 123
           +KN G I A D +A RL S+   L   GV+   ++  D      +   +     VLLD  
Sbjct: 402 MKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDR---VLLDAP 458

Query: 124 CSGSGMPSRQLEEPGAGTPSPVR-LHALAGFQQRALCHAL-----TFPSLQRLVYSMCSL 177
           CSG+G+ S+   +P   T    + +   A  Q+  L  A+     T  +   LVY  CS+
Sbjct: 459 CSGTGVISK---DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSI 515

Query: 178 CQEENEDMVQDALQQNPGAFRLAPALPARPHRGLSTF------PGAEHCLRASPKTTLSG 231
             EENE +V  AL++     RL P        G + F      P      R  P T    
Sbjct: 516 TVEENEWVVDYALKKR--NVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMD 573

Query: 232 GFFVAVIERVEMPTSASQ---AKASAP------------ERTPSPAPKRKKRAKS 271
           GFF+A  ++       SQ   ++ + P            E +  PA K K  AK+
Sbjct: 574 GFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKSENSSQPAKKAKGAAKT 628


>gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]
          Length = 808

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 85/295 (28%), Positives = 125/295 (42%), Gaps = 35/295 (11%)

Query: 4   LLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHLAAL 63
           L+V+ +   +   P Y AGH +LQ  +S LP M L P++             KTS++A L
Sbjct: 342 LVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQL 401

Query: 64  LKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLLDPS 123
           +KN G I A D +A RL S+   L   GV+   ++  D      +   +     VLLD  
Sbjct: 402 MKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDR---VLLDAP 458

Query: 124 CSGSGMPSRQLEEPGAGTPSPVR-LHALAGFQQRALCHAL-----TFPSLQRLVYSMCSL 177
           CSG+G+ S+   +P   T    + +   A  Q+  L  A+     T  +   LVY  CS+
Sbjct: 459 CSGTGVISK---DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSI 515

Query: 178 CQEENEDMVQDALQQNPGAFRLAPALPARPHRGLSTF------PGAEHCLRASPKTTLSG 231
             EENE +V  AL++     RL P        G + F      P      R  P T    
Sbjct: 516 TVEENEWVVDYALKKR--NVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMD 573

Query: 232 GFFVAVIERVEMPTSASQ---AKASAP------------ERTPSPAPKRKKRAKS 271
           GFF+A  ++       SQ   ++ + P            E +  PA K K  AK+
Sbjct: 574 GFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKSENSSQPAKKAKGAAKT 628


>gi|187828635 NOL1/NOP2/Sun domain family, member 7 [Homo sapiens]
          Length = 718

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 84/311 (27%), Positives = 138/311 (44%), Gaps = 51/311 (16%)

Query: 3   ELLVFPA--QTDLHEHPLYRAGHLILQDRASCLP-----AMLLDPRQAPM----SWMPVP 51
           ++L+FP+  + DL    L++   LI QD++  L      A+L       M    SW  V 
Sbjct: 249 DVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAVHSVKALLNMDDDVLMVNTGSWYTVS 308

Query: 52  PQAIKTSHLAALLKNQGKIFAFDLDAR-RLASMATLLAWAGVSCCELAEEDFLAVSPLDP 110
             +I T++      N  K+F   + ++ +   + TL    G    E+  E F+ +   D 
Sbjct: 309 HMSILTNN------NTSKVFVCGVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESKDH 362

Query: 111 RYREVHYVLLDPSCSGSGMPS------------RQLEEPGAGTPSPVRLHALAGFQQRAL 158
           R ++V  +LL P CSG G+ +              L++   G  S  +LH LA  Q   L
Sbjct: 363 RLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYEQL 422

Query: 159 CHALTFPSLQRLVYSMCSLCQEENEDMVQDALQ-QNPG----AFRLAPALPARPHRGLST 213
            HA+ F   Q +VY  CS+  EENE +V+ AL+ Q+ G     +RL+P  P  P   L  
Sbjct: 423 THAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSP--PVLPLCSLKE 480

Query: 214 FP-GAEHCLRASPKTTLSGGFFVAVIERVEMPT---SASQAKASAPER---------TPS 260
                +   R  P + ++ G F++++ R   P+   S +   A A  +           S
Sbjct: 481 IQLSTDKFFRMEP-SEITNGCFLSILTRERDPSETVSVNDVLARAAAKGLLDGIELGKSS 539

Query: 261 PAPKRKKRAKS 271
              K+KK++K+
Sbjct: 540 KREKKKKKSKT 550


>gi|39995082 NOL1/NOP2/Sun domain family, member 2 [Homo sapiens]
          Length = 767

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 71/292 (24%), Positives = 108/292 (36%), Gaps = 66/292 (22%)

Query: 21  AGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHLAALLKN-------QGKIFAF 73
           +G++  Q+  S +P +LL+ R              KT+ L  +L         +G + A 
Sbjct: 155 SGNISRQEAVSMIPPLLLNVRPHHKILDMCAAPGSKTTQLIEMLHADMNVPFPEGFVIAN 214

Query: 74  DLDARRLASMATLLAWAGVSCCELAEEDFLAVSPL----DPRYREVHY--VLLDPSCSGS 127
           D+D +R   +          C  +   D  ++  L    D R   + Y  +L D  CSG 
Sbjct: 215 DVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDVDGRKEILFYDRILCDVPCSGD 274

Query: 128 GMPSRQLEEPGAGTP-SPVRLHALAGFQQR-ALCHALTFPSLQRLVYSMCSLCQEENEDM 185
           G   + ++     T  + ++LH   G Q R A   A       R+VYS CSL   E+E +
Sbjct: 275 GTMRKNIDVWKKWTTLNSLQLH---GLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAV 331

Query: 186 VQDALQQNPGAFRLAPALPARPHRGLSTFPG----------------------------- 216
           +   L+++ GA  LA      P  GL   PG                             
Sbjct: 332 IASLLEKSEGALELADVSNELP--GLKWMPGITQWKVMTKDGQWFTDWDAVPHSRHTQIR 389

Query: 217 ----------------AEHCLRASPKTTLSGGFFVAV-IERVEMPTSASQAK 251
                            E CLR  P    +GGFFVAV +++  MP +  Q K
Sbjct: 390 PTMFPPKDPEKLQAMHLERCLRILPHHQNTGGFFVAVLVKKSSMPWNKRQPK 441


>gi|32698918 NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]
          Length = 469

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 17/193 (8%)

Query: 23  HLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHLAALLKNQGKIFAFDL---DARR 79
           +L LQ+  S L + +L+P+              KT+H+AAL+ +QG++ A D       +
Sbjct: 215 YLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEK 274

Query: 80  LASMATLLAWAGVSC-----CELAEEDFLAVSPLDPRYREVHY--VLLDPSCSGSGMPSR 132
           +   A LL    +        +  + D +  +  +P +    +  +LLD  CSG G    
Sbjct: 275 IKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPN 334

Query: 133 QLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQR-LVYSMCSLCQEENEDMVQDALQ 191
                 A T S   + +    Q++    A+     +  LVYS C++   ENE+ V  AL 
Sbjct: 335 M-----ACTWSVKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALT 389

Query: 192 QNPGAFRLAPALP 204
           + P   +L P  P
Sbjct: 390 KFP-CLQLQPQEP 401


>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257
           L+PA   R     S   G +H  R  P+ T           R + P S      A A ER
Sbjct: 122 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 170

Query: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303
            P+  P R++    C RC    + +        +  + LP   G  L  PW+
Sbjct: 171 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 222


>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
           sapiens]
          Length = 598

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257
           L+PA   R     S   G +H  R  P+ T           R + P S      A A ER
Sbjct: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487

Query: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303
            P+  P R++    C RC    + +        +  + LP   G  L  PW+
Sbjct: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539


>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
           sapiens]
          Length = 616

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257
           L+PA   R     S   G +H  R  P+ T           R + P S      A A ER
Sbjct: 457 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 505

Query: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303
            P+  P R++    C RC    + +        +  + LP   G  L  PW+
Sbjct: 506 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 557


>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
          Length = 793

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 44/155 (28%), Positives = 58/155 (37%), Gaps = 25/155 (16%)

Query: 121 DPSCSG-SGMPSRQLEEPGAGTPS------PVRLHALAGFQQRALCHALTFPSLQRLVYS 173
           D +C+G  G  SR+    G G+        PV   A AG Q RA C A            
Sbjct: 142 DAACNGLPGSDSRRAPGKGGGSKGSPGQRPPVPAAAAAGAQARASCAAAKTQG------R 195

Query: 174 MCSLCQEENEDMVQDALQQNPGAF----RLAPALPARPHRGLSTFPGAEHCLRASPKTTL 229
            C  C + N  ++   L   P +     + A ALPA+  RG S     E    A P    
Sbjct: 196 CCWECLQNNLAVLPGELGALPHSATAEEKPARALPAQDDRGASR--EREEGALAEPAPV- 252

Query: 230 SGGFFVAVIERVEMPTSASQAKASAPERTPSPAPK 264
                 AV         A+ ++AS P   P PAP+
Sbjct: 253 -----PAVAHSPPATVEAATSRASPPALLPGPAPR 282


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 200  APALPARPHRGLSTFPGAEHCLRASP-KTTLSGGFFVAVIERVEMPTSASQAKASAPERT 258
            AP+   +P   L+  PG    L ASP K    G   + V  +     +A+ A A+AP   
Sbjct: 1300 APSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAP 1359

Query: 259  P---SPAPKRKKRAKSCSRCLHTALHIAE 284
            P   SP    +++ +  S CL  AL   E
Sbjct: 1360 PEGASPGDSARQKLEETSACLAAALQAVE 1388


>gi|221219026 pleckstrin homology-like domain, family B, member 1
           isoform b [Homo sapiens]
          Length = 1319

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 41/154 (26%), Positives = 55/154 (35%), Gaps = 39/154 (25%)

Query: 194 PGAFRLAPALPA----------RPHRGLSTFPGAEHCLRASPK-----TTLSGGFFVAVI 238
           PG+ +  P +PA          RP       PG+E  L  SP       T S G     +
Sbjct: 379 PGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTL 438

Query: 239 ERVE------------------MPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTAL 280
           +  E                   P+ + +A +  P RT +P PK  +      R    A 
Sbjct: 439 QPPESPRLGRRGLDSMRELPPLSPSLSRRALSPLPTRT-TPDPKLNREVAESPRPRRWAA 497

Query: 281 HIAEAPG-SLLPGGKGRCLSSPWKTLG----PHR 309
           H A     SL  G +GR   SP  TLG    PH+
Sbjct: 498 HGASPEDFSLTLGARGRRTRSPSPTLGESLAPHK 531


>gi|221219024 pleckstrin homology-like domain, family B, member 1
           isoform a [Homo sapiens]
          Length = 1377

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 41/154 (26%), Positives = 55/154 (35%), Gaps = 39/154 (25%)

Query: 194 PGAFRLAPALPA----------RPHRGLSTFPGAEHCLRASPK-----TTLSGGFFVAVI 238
           PG+ +  P +PA          RP       PG+E  L  SP       T S G     +
Sbjct: 379 PGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTL 438

Query: 239 ERVE------------------MPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTAL 280
           +  E                   P+ + +A +  P RT +P PK  +      R    A 
Sbjct: 439 QPPESPRLGRRGLDSMRELPPLSPSLSRRALSPLPTRT-TPDPKLNREVAESPRPRRWAA 497

Query: 281 HIAEAPG-SLLPGGKGRCLSSPWKTLG----PHR 309
           H A     SL  G +GR   SP  TLG    PH+
Sbjct: 498 HGASPEDFSLTLGARGRRTRSPSPTLGESLAPHK 531


>gi|38424073 pleckstrin homology-like domain, family B, member 1
           isoform a [Homo sapiens]
          Length = 1377

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 41/154 (26%), Positives = 55/154 (35%), Gaps = 39/154 (25%)

Query: 194 PGAFRLAPALPA----------RPHRGLSTFPGAEHCLRASPK-----TTLSGGFFVAVI 238
           PG+ +  P +PA          RP       PG+E  L  SP       T S G     +
Sbjct: 379 PGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTL 438

Query: 239 ERVE------------------MPTSASQAKASAPERTPSPAPKRKKRAKSCSRCLHTAL 280
           +  E                   P+ + +A +  P RT +P PK  +      R    A 
Sbjct: 439 QPPESPRLGRRGLDSMRELPPLSPSLSRRALSPLPTRT-TPDPKLNREVAESPRPRRWAA 497

Query: 281 HIAEAPG-SLLPGGKGRCLSSPWKTLG----PHR 309
           H A     SL  G +GR   SP  TLG    PH+
Sbjct: 498 HGASPEDFSLTLGARGRRTRSPSPTLGESLAPHK 531


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
          Length = 2462

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 26/143 (18%)

Query: 187  QDALQQNPGAFR----------LAPALP--------ARPHRGLSTFPGAEHCLRASPKTT 228
            QDALQQ P              + P+ P        + P R  +TFP A HC    P   
Sbjct: 1859 QDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAATFPPATHC----PLGG 1914

Query: 229  LSGGFFVAVIERVEMPTSASQ-AKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPG 287
               G +  ++E V +P  A + A+   P      A   K  A+S      +    +E P 
Sbjct: 1915 TLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPASSPSKGSE-PR 1973

Query: 288  SLLP--GGKGRCLSSPWKTLGPH 308
             L+P   G      +P K L PH
Sbjct: 1974 PLVPPVSGHATIARTPAKNLAPH 1996


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
          Length = 2524

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 26/143 (18%)

Query: 187  QDALQQNPGAFR----------LAPALP--------ARPHRGLSTFPGAEHCLRASPKTT 228
            QDALQQ P              + P+ P        + P R  +TFP A HC    P   
Sbjct: 1875 QDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAATFPPATHC----PLGG 1930

Query: 229  LSGGFFVAVIERVEMPTSASQ-AKASAPERTPSPAPKRKKRAKSCSRCLHTALHIAEAPG 287
               G +  ++E V +P  A + A+   P      A   K  A+S      +    +E P 
Sbjct: 1931 TLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPASSPSKGSE-PR 1989

Query: 288  SLLP--GGKGRCLSSPWKTLGPH 308
             L+P   G      +P K L PH
Sbjct: 1990 PLVPPVSGHATIARTPAKNLAPH 2012


>gi|239751436 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 14/74 (18%)

Query: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVA---VIERVEMPTSASQAKASAP 255
           L P   ARPH      PG  H        +L+GG  +A   + +R   P S +  + SA 
Sbjct: 43  LPPIQKARPH------PGQTHT-----SVSLTGGPVLAGKLLAKRPRSPPSPNGERGSAE 91

Query: 256 ERTPSPAPKRKKRA 269
            R+P+ AP+++ R+
Sbjct: 92  SRSPTAAPQQRPRS 105


>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 18/105 (17%)

Query: 198 RLAPALPARPHR-GLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQAKASAPE 256
           RL P   A P R G    P + H  R S      G    A   R     +A+    S P+
Sbjct: 136 RLCPERSAPPRRRGPPPLPTSCHWARRSCALRRGGA---ASWRRGPGTPAAAPEAPSPPD 192

Query: 257 RTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSSP 301
            +PSP   R      C  C H +        S LP G+ RCL  P
Sbjct: 193 HSPSPWTSR------CPPCPHAS--------SFLPPGQSRCLRLP 223


>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 18/105 (17%)

Query: 198 RLAPALPARPHR-GLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQAKASAPE 256
           RL P   A P R G    P + H  R S      G    A   R     +A+    S P+
Sbjct: 136 RLCPERSAPPRRRGPPPLPTSCHWARRSCALRRGGA---ASWRRGPGTPAAAPEAPSPPD 192

Query: 257 RTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSSP 301
            +PSP   R      C  C H +        S LP G+ RCL  P
Sbjct: 193 HSPSPWTSR------CPPCPHAS--------SFLPPGQSRCLRLP 223


>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 18/105 (17%)

Query: 198 RLAPALPARPHR-GLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQAKASAPE 256
           RL P   A P R G    P + H  R S      G    A   R     +A+    S P+
Sbjct: 136 RLCPERSAPPRRRGPPPLPTSCHWARRSCALRRGGA---ASWRRGPGTPAAAPEAPSPPD 192

Query: 257 RTPSPAPKRKKRAKSCSRCLHTALHIAEAPGSLLPGGKGRCLSSP 301
            +PSP   R      C  C H +        S LP G+ RCL  P
Sbjct: 193 HSPSPWTSR------CPPCPHAS--------SFLPPGQSRCLRLP 223


>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
          Length = 269

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 41/161 (25%), Positives = 57/161 (35%), Gaps = 29/161 (18%)

Query: 126 GSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDM 185
           G G     L EPGA  P+     +   F       A   P+L+        LC +E   +
Sbjct: 34  GRGAEPGALGEPGAAAPAMYDDESAIDFSAYIDSMAAV-PTLE--------LCHDE---L 81

Query: 186 VQDALQQNPGAFRLAPA--LPARPHRGLSTFPGAEHCLRASPKT-------TLSGGFFVA 236
             D    N  A    P   LP  P R L   P A   L+  P         +L      A
Sbjct: 82  FADLFNSNHKAGGAGPLELLPGGPARPLGPGPAAPRLLKREPDWGDGDAPGSLLPAQVAA 141

Query: 237 VIERV--------EMPTSASQAKASAPERTPSPAPKRKKRA 269
             + V          P ++ +   S+P +TP+P P R+K A
Sbjct: 142 CAQTVVSLAAAGQPTPPTSPEPPRSSPRQTPAPGPAREKSA 182


>gi|59710104 plexin A3 [Homo sapiens]
          Length = 1871

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 51  PPQAIKTSHLAALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDP 110
           PP     +H  A + N  K+   D  ARRL +  ++  W G+ C  L  +D   +   +P
Sbjct: 80  PPSMRVCAHRLAPVDNINKLLLIDYAARRLVACGSI--WQGI-CQFLRLDDLFKLG--EP 134

Query: 111 RYREVHYV 118
            +R+ HY+
Sbjct: 135 HHRKEHYL 142


>gi|239756949 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 14/74 (18%)

Query: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVA---VIERVEMPTSASQAKASAP 255
           L P   ARPH      PG  H         L+GG  +A   + +R   P S +  + SA 
Sbjct: 43  LPPIQKARPH------PGQTHT-----SVRLTGGPVLAGKLLAKRPRSPPSPNGERGSAA 91

Query: 256 ERTPSPAPKRKKRA 269
            R+P+ AP+++ R+
Sbjct: 92  SRSPTAAPQQRPRS 105


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,114,197
Number of Sequences: 37866
Number of extensions: 803405
Number of successful extensions: 3155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 3096
Number of HSP's gapped (non-prelim): 128
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press