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Search of human proteins with 86990448
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens] 727 0.0
gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] 37 0.020
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 37 0.020
gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] 35 0.077
gi|7662230 ring finger protein 40 [Homo sapiens] 34 0.17
gi|157504499 ankyrin repeat domain 47 [Homo sapiens] 34 0.17
gi|19923202 enhancer of zeste homolog 1 [Homo sapiens] 34 0.22
gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] 33 0.29
gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] 33 0.29
gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] 33 0.29
gi|239754287 PREDICTED: hypothetical protein [Homo sapiens] 33 0.29
gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo ... 33 0.29
gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo ... 33 0.29
gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo ... 33 0.29
gi|239740804 PREDICTED: hypothetical protein [Homo sapiens] 33 0.29
gi|239740753 PREDICTED: hypothetical protein [Homo sapiens] 33 0.29
gi|239513961 PREDICTED: hypothetical protein [Homo sapiens] 33 0.29
gi|19923559 EMSY protein [Homo sapiens] 33 0.29
gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Hom... 33 0.38
gi|169168219 PREDICTED: hypothetical protein [Homo sapiens] 33 0.38
gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Hom... 33 0.38
gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sap... 33 0.38
gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens] 33 0.50
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 32 0.65
gi|7657023 dickkopf homolog 2 precursor [Homo sapiens] 32 0.85
gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens] 32 0.85
gi|239745228 PREDICTED: hypothetical protein XP_002343392 [Homo ... 32 0.85
gi|23510384 enhancer of zeste 2 isoform b [Homo sapiens] 32 1.1
gi|21361095 enhancer of zeste 2 isoform a [Homo sapiens] 32 1.1
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 32 1.1
>gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]
Length = 349
Score = 727 bits (1877), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MAGPAIHTAPMLFLVLLLPLELSLAGALAPGTPARNLPENHIDLPGPALWTPQASHHRRR 60
MAGPAIHTAPMLFLVLLLPLELSLAGALAPGTPARNLPENHIDLPGPALWTPQASHHRRR
Sbjct: 1 MAGPAIHTAPMLFLVLLLPLELSLAGALAPGTPARNLPENHIDLPGPALWTPQASHHRRR 60
Query: 61 GPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLLGLALPYP 120
GPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLLGLALPYP
Sbjct: 61 GPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLLGLALPYP 120
Query: 121 EKENRPPGWERTRKRSREHKRRRDRLRLHQGRALVRGPSSLMKKAELSEAQVLDAAMEES 180
EKENRPPGWERTRKRSREHKRRRDRLRLHQGRALVRGPSSLMKKAELSEAQVLDAAMEES
Sbjct: 121 EKENRPPGWERTRKRSREHKRRRDRLRLHQGRALVRGPSSLMKKAELSEAQVLDAAMEES 180
Query: 181 STSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQPRSDGEVMPTLDMALFDWTDYED 240
STSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQPRSDGEVMPTLDMALFDWTDYED
Sbjct: 181 STSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQPRSDGEVMPTLDMALFDWTDYED 240
Query: 241 LKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCTPHNRGL 300
LKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCTPHNRGL
Sbjct: 241 LKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCDLREHLCTPHNRGL 300
Query: 301 NNKCFDDCMCVEGLRCYAKFHRNRRVTRRKGRCVEPETANGDQGSFINV 349
NNKCFDDCMCVEGLRCYAKFHRNRRVTRRKGRCVEPETANGDQGSFINV
Sbjct: 301 NNKCFDDCMCVEGLRCYAKFHRNRRVTRRKGRCVEPETANGDQGSFINV 349
>gi|7110719 dickkopf homolog 1 precursor [Homo sapiens]
Length = 266
Score = 37.4 bits (85), Expect = 0.020
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
Query: 256 RGKLSSDGNETSPAEGEPCDHHQDCLPGTCCD-----------LRE-HLCTPHNRGLNN- 302
R LSS T EG C DC G CC L+E +CT H R ++
Sbjct: 171 RTTLSSKMYHTKGQEGSVCLRSSDCASGLCCARHFWSKICKPVLKEGQVCTKHRRKGSHG 230
Query: 303 -KCFDDCMCVEGLRC 316
+ F C C EGL C
Sbjct: 231 LEIFQRCYCGEGLSC 245
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 37.4 bits (85), Expect = 0.020
Identities = 65/273 (23%), Positives = 104/273 (38%), Gaps = 57/273 (20%)
Query: 29 APGTPARNLPENHIDLPGPALW-------TPQASHHRRRGPGKKEWGPGLPSQAQDGAVV 81
APG PA LP + L G L P+ HH R PG + P LP Q+G +
Sbjct: 996 APGPPAGPLPRMDLPLAGQPLRHPTRARPRPRRQHHHRPPPGGPQVPPALP---QEGNGL 1052
Query: 82 TATRQ-------ASRLPEAEGL-LPEQSPAGLLQDKDLLLGLALPYPEKENRPPGWERTR 133
+A + RL + + L PE+ PA G A P P + G
Sbjct: 1053 SARVDEGVEEFFSKRLIQQDRLWAPEEDPA--------TEGGATPVPRTLRKKLGTLFAF 1104
Query: 134 KRSREHKRRRDRLRLHQGRA----------LVRGPSSLMKKAELSEAQVLDAAMEESS-- 181
K+ R + R L G A L+R P+ + EL A+ ++ + +
Sbjct: 1105 KKPRSTRGPRTDLETSPGAAPRTRKTTFGDLLRPPTRPSRGEELGGAEGDTSSPDPAGRS 1164
Query: 182 ------TSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQP--RSDGEVMPTLDMALF 233
S A +M L PA EE+ + RP + +P R + E+ P+ + +
Sbjct: 1165 RPRYTRDSKAYSMILL------PAEEEATL----GARPDKRRPLERGETELAPSFEQRVQ 1214
Query: 234 DWTDYEDL-KPDGWPSAKKKEKHRGKLSSDGNE 265
+ + G K+K+ G++ G++
Sbjct: 1215 VMLQRIGVSRGSGGAEGKRKQSKDGEIKKAGSD 1247
>gi|7657025 dickkopf homolog 4 precursor [Homo sapiens]
Length = 224
Score = 35.4 bits (80), Expect = 0.077
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 26/105 (24%)
Query: 239 EDLKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCC--DLREHLCTP- 295
++ +P PS KK + +G+ EGE C DC PG CC +C P
Sbjct: 121 QENQPKRKPSIKKSQGRKGQ-----------EGESCLRTFDCGPGLCCARHFWTKICKPV 169
Query: 296 -------HNRGLNN-----KCFDDCMCVEGLRCYAKFHRNRRVTR 328
RG + + F C C GL C ++ NR+ R
Sbjct: 170 LLEGQVCSRRGHKDTAQAPEIFQRCDCGPGLLCRSQLTSNRQHAR 214
Score = 29.3 bits (64), Expect = 5.5
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 8/45 (17%)
Query: 280 CLPGTCCDLREHLCTPHN--------RGLNNKCFDDCMCVEGLRC 316
CL T C+ R+ P + RGL +C D MC G C
Sbjct: 41 CLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLC 85
>gi|7662230 ring finger protein 40 [Homo sapiens]
Length = 1001
Score = 34.3 bits (77), Expect = 0.17
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 47 PALWTPQASHHRRRGPGKKEWGPG---LPSQAQDGAVVTATRQASRLPEAEGLLPEQSPA 103
P L P+ S PGK+E GPG P ++ A V T + + E L+P +
Sbjct: 530 PNLGHPEDSGVSAPAPGKEEGGPGPVSTPDNRKEMAPVPGTTTTTTSVKKEELVPSEE-- 587
Query: 104 GLLQDKDLLLGLALPYPEKENRPPGWERTRKRSREHKRRRDR-LRLHQGRALVRGP-SSL 161
+ + PG + R RE + R R LR +G +L P +S
Sbjct: 588 -----------------DFQGITPGAQGPSSRGREPEARPKRELREREGPSLGPPPVASA 630
Query: 162 MKKAELSEAQVLDAAMEES 180
+ +A+ +A+V + +ES
Sbjct: 631 LSRADREKAKVEETKRKES 649
>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
Length = 821
Score = 34.3 bits (77), Expect = 0.17
Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 26/170 (15%)
Query: 69 PGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLLGLALPYPEKENRPPG 128
PGL GA ++ AS A G+L + +P+GLL P P
Sbjct: 78 PGLAGARSPGAWTSSESLASDDGGAPGILSQGAPSGLLMQ-----------PLSPRAPVR 126
Query: 129 WERTRKRSREHKRRRDRLRLHQ-----GRALVRGPSSLMKKA---ELSEAQVLDAAMEES 180
R RE RR + + H+ GR + R P + + L+ A A ++
Sbjct: 127 NPRVEHTLRETSRRLELAQTHERAPSPGRGVPRSPRGSGRSSPAPNLAPASPGPAQLQLV 186
Query: 181 STSLAPTMFFLTTFEAAPATEESLILPVTSLRPQ-------QAQPRSDGE 223
+A + L E T L V +LR + +AQP DGE
Sbjct: 187 REQMAAALRRLRELEDQARTLPELQEQVRALRAEKARLLAGRAQPEPDGE 236
>gi|19923202 enhancer of zeste homolog 1 [Homo sapiens]
Length = 747
Score = 33.9 bits (76), Expect = 0.22
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 13/76 (17%)
Query: 247 PSAKKKEKHRG--------KLSSDGNETSPAEGEPCDHHQDCLPGTC-CDLREHLCTPH- 296
PS KKK KHR +L D + T +PCDH TC C + ++ C
Sbjct: 489 PSQKKKRKHRLWAAHCRKIQLKKDNSSTQVYNYQPCDHPDRPCDSTCPCIMTQNFCEKFC 548
Query: 297 --NRGLNNKCFDDCMC 310
N N+ F C C
Sbjct: 549 QCNPDCQNR-FPGCRC 563
>gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 33.5 bits (75), Expect = 0.29
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 23/79 (29%)
Query: 266 TSPAEGEPCDHHQDCLPGTCCDLREHL----CTP--------HNRGLN-----------N 302
T + G CD+ +DC PG CC + L CTP H+ +
Sbjct: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPD 259
Query: 303 KCFDDCMCVEGLRCYAKFH 321
D C C GL C H
Sbjct: 260 GALDRCPCASGLLCQPHSH 278
>gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 33.5 bits (75), Expect = 0.29
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 23/79 (29%)
Query: 266 TSPAEGEPCDHHQDCLPGTCCDLREHL----CTP--------HNRGLN-----------N 302
T + G CD+ +DC PG CC + L CTP H+ +
Sbjct: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPD 259
Query: 303 KCFDDCMCVEGLRCYAKFH 321
D C C GL C H
Sbjct: 260 GALDRCPCASGLLCQPHSH 278
>gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 33.5 bits (75), Expect = 0.29
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 23/79 (29%)
Query: 266 TSPAEGEPCDHHQDCLPGTCCDLREHL----CTP--------HNRGLN-----------N 302
T + G CD+ +DC PG CC + L CTP H+ +
Sbjct: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPD 259
Query: 303 KCFDDCMCVEGLRCYAKFH 321
D C C GL C H
Sbjct: 260 GALDRCPCASGLLCQPHSH 278
>gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo
sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo
sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo
sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|239740804 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|239513961 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 33.5 bits (75), Expect = 0.29
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 33 PARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPE 92
P+R L N PGP L TP + H P P A+ ++ + L
Sbjct: 40 PSRQLRRNS-SAPGP-LSTPNTAPHT---PVPPPCNIPFPHAARGNVLIVGSHVLQHLDR 94
Query: 93 AEGLLPE--QSPAGL------LQDKDLLLGLALPYPEKENRPPGWERTRKRS 136
E LP +SP GL +Q L G A+P ++PP W RK+S
Sbjct: 95 KEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP-ARKQS 145
>gi|19923559 EMSY protein [Homo sapiens]
Length = 1322
Score = 33.5 bits (75), Expect = 0.29
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 19 PLELSLAGALAPGTPARNLPENHIDLPGPALWTPQASHHRRRGPGKKEWGPGLPSQAQDG 78
P + +LA ++ G A +LP H+ + G A TPQ R G L ++ D
Sbjct: 1170 PPKKALATSMLTGE-AGSLPSTHMVVAGMANSTPQQQKCRESCSSPSTVGSSLTTRKIDP 1228
Query: 79 AVVTATRQASRLPEAEGLLPEQSPAGLL 106
V AT Q R+ E+SPA ++
Sbjct: 1229 PAVPATGQFMRIQNVGQKKAEESPAEII 1256
>gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 33.1 bits (74), Expect = 0.38
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 255 HRGKLSSDGNETSPAEGEPCDH---HQDCLPGTCCDLREHLCTPHNR--GLNNKCFDDCM 309
H G D + PA + CD H+DC+ +CC CT + G N C D C
Sbjct: 312 HAGYPIQDWRDDFPACTDKCDDSFVHRDCI--SCCP---PTCTFEKQCLGSNLHCLDGCY 366
Query: 310 CVEGL 314
C +GL
Sbjct: 367 CPDGL 371
>gi|169168219 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 33.1 bits (74), Expect = 0.38
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 56 HHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGL 105
H +++G K W PS + A+ TR SR+ G P PAGL
Sbjct: 42 HSKKQGTILKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGL 91
>gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 33.1 bits (74), Expect = 0.38
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 255 HRGKLSSDGNETSPAEGEPCDH---HQDCLPGTCCDLREHLCTPHNR--GLNNKCFDDCM 309
H G D + PA + CD H+DC+ +CC CT + G N C D C
Sbjct: 312 HAGYPIQDWRDDFPACTDKCDDSFVHRDCI--SCCP---PTCTFEKQCLGSNLHCLDGCY 366
Query: 310 CVEGL 314
C +GL
Sbjct: 367 CPDGL 371
>gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo
sapiens]
Length = 2250
Score = 33.1 bits (74), Expect = 0.38
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 255 HRGKLSSDGNETSPAEGEPCDH---HQDCLPGTCCDLREHLCTPHNR--GLNNKCFDDCM 309
H G D + PA + CD H+DC+ +CC CT + G N C D C
Sbjct: 312 HAGYPIQDWRDDFPACTDKCDDSFVHRDCI--SCCP---PTCTFEKQCLGSNLHCLDGCY 366
Query: 310 CVEGL 314
C +GL
Sbjct: 367 CPDGL 371
>gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens]
Length = 1843
Score = 32.7 bits (73), Expect = 0.50
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 72 PSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLLGLALPYPEKENRPPGWER 131
P D + A R+ SR +A LP P G + +D G+ +P + PPG +
Sbjct: 1105 PGGGSDPRIPAAPRKVSREEQA---LPRGLPGGWVTIQD---GIYTAHPVRTFDPPGGVQ 1158
Query: 132 TRKRSREHKRRRDRLRLHQGRALVRGP 158
+R + + R L + R L GP
Sbjct: 1159 LSQREPQSRHRETALSVQAPRPLQGGP 1185
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 32.3 bits (72), Expect = 0.65
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 19 PLELSLAG---ALAPGTPARNLPENH---IDLPGPALWTPQASHHRRRGPGKKEWGPGLP 72
PL L+LA ALA P+R+ H D PGP QA R + P P
Sbjct: 1123 PLALALAARERALASQAPSRSPTPVHSPDADRPGPLFVDVQARDPERGSLASPAFSPRSP 1182
Query: 73 SQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLL 113
+ V A R+A ++P E PE + +L D L
Sbjct: 1183 AWIP----VPARREAEKVPREERKSPEDKKSMILSVLDTSL 1219
>gi|7657023 dickkopf homolog 2 precursor [Homo sapiens]
Length = 259
Score = 32.0 bits (71), Expect = 0.85
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 270 EGEPCDHHQDCLPGTCCDL------------REHLCTPHNRGLNN--KCFDDCMCVEGLR 315
EG+PC DC+ G CC + +CT + ++ + F C C +GL
Sbjct: 179 EGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLS 238
Query: 316 C 316
C
Sbjct: 239 C 239
>gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens]
Length = 574
Score = 32.0 bits (71), Expect = 0.85
Identities = 44/212 (20%), Positives = 75/212 (35%), Gaps = 37/212 (17%)
Query: 117 LPYPEKENRPPGWERTRKRSREHKRRRDRLRLHQGRAL---VRGPSSLMKKAELSEAQVL 173
LP + PPG ER + GR L V P+ + + A +
Sbjct: 332 LPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLY 391
Query: 174 DAAMEESSTSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQPRSDGEVMPTLDMALF 233
LA T + A AT+ + V PQ+ + + + +P +
Sbjct: 392 SLRCAAEEKCLASTAY------APEATDYDV--RVLLRFPQRVKNQGTADFLPNRPRHTW 443
Query: 234 DWTD----YEDLKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCCD-- 287
+W Y + D + + GK ++G++ S CL + CD
Sbjct: 444 EWHSCHQHYHSM--DEFSHYDLLDAATGKKVAEGHKAS-----------FCLEDSTCDFG 490
Query: 288 -LREHLCTPHNRGLNNKCFD------DCMCVE 312
L+ + CT H +GL+ C+D DC ++
Sbjct: 491 NLKRYACTSHTQGLSPGCYDTYNADIDCQWID 522
>gi|239745228 PREDICTED: hypothetical protein XP_002343392 [Homo
sapiens]
Length = 488
Score = 32.0 bits (71), Expect = 0.85
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 19 PLELSLAGALAPGTP-ARNLPENHIDLPGPALWTPQASHHRRRG---PGKKEWGPGLPSQ 74
PL L+ + G P R P H P P+L TP G P K+ GP ++
Sbjct: 237 PLPLTTTAGVVTGLPEVRGAPNVHRLPPPPSLRTPTPGLTEGGGTGLPSKQRRGPSPKTE 296
Query: 75 --AQDGAVVTATRQASRLPEAEGLLPEQSPAGL---LQDKDLLLGLALPYPEK-ENRPPG 128
G++ A+ P +G P + L + + LG ALPYP + E PPG
Sbjct: 297 LGGPQGSLGRASLSGPFGPGPQGGPPSRDRRHLGVQIGRVRVPLGSALPYPARSELAPPG 356
>gi|23510384 enhancer of zeste 2 isoform b [Homo sapiens]
Length = 707
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 247 PSAKKKEKHRG--------KLSSDGNETSPAEGEPCDH-HQDCLPGTCCDLREHLCTPHN 297
P KKK KHR +L DG+ +PCDH Q C C + ++ C
Sbjct: 449 PPRKKKRKHRLWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKF- 507
Query: 298 RGLNNKCFDDCM-CVEGLRCYAK 319
+C +C G RC A+
Sbjct: 508 ----CQCSSECQNRFPGCRCKAQ 526
>gi|21361095 enhancer of zeste 2 isoform a [Homo sapiens]
Length = 751
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 247 PSAKKKEKHRG--------KLSSDGNETSPAEGEPCDH-HQDCLPGTCCDLREHLCTPHN 297
P KKK KHR +L DG+ +PCDH Q C C + ++ C
Sbjct: 493 PPRKKKRKHRLWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKF- 551
Query: 298 RGLNNKCFDDCM-CVEGLRCYAK 319
+C +C G RC A+
Sbjct: 552 ----CQCSSECQNRFPGCRCKAQ 570
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 31.6 bits (70), Expect = 1.1
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 1 MAGPAIHTAPMLFLVLLLPLELSLAGALAPGTPARNLPENHIDLPGPALWTPQASHHRRR 60
MAGP AP+L L+LL L L+ AGA G P P PG +A
Sbjct: 1 MAGPRA-CAPLLLLLLLGEL-LAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLP 58
Query: 61 GPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAG 104
GP + PG P + + + LP +GL P G
Sbjct: 59 GPPGPKGAPGKPGKPGEAGL-------PGLPGVDGLTGRDGPPG 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,795,862
Number of Sequences: 37866
Number of extensions: 967390
Number of successful extensions: 3824
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 3716
Number of HSP's gapped (non-prelim): 181
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.