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Search of human proteins with 85067501
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|85067501 arachidonate 15-lipoxygenase, second type isoform d
[Homo sapiens]
(676 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|85067501 arachidonate 15-lipoxygenase, second type isoform d ... 1392 0.0
gi|85067499 arachidonate 15-lipoxygenase, second type isoform a ... 1320 0.0
gi|85067503 arachidonate 15-lipoxygenase, second type isoform b ... 1210 0.0
gi|182765464 arachidonate lipoxygenase 3 [Homo sapiens] 728 0.0
gi|4502053 arachidonate 12-lipoxygenase, 12R type [Homo sapiens] 694 0.0
gi|4502057 arachidonate 5-lipoxygenase [Homo sapiens] 557 e-158
gi|154426292 arachidonate 12-lipoxygenase [Homo sapiens] 467 e-131
gi|40316937 arachidonate 15-lipoxygenase [Homo sapiens] 458 e-129
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap... 42 0.002
gi|118402590 myosin XV [Homo sapiens] 33 0.66
gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens] 33 0.66
gi|239756667 PREDICTED: hypothetical protein [Homo sapiens] 33 1.1
gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo ... 33 1.1
gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo ... 33 1.1
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 32 1.5
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 32 1.5
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 32 1.5
gi|224458288 lipoxygenase homology domains 1 isoform 2 [Homo sap... 31 3.3
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 31 4.3
gi|155969714 nuclear protein, ataxia-telangiectasia locus [Homo... 30 5.6
gi|117168250 phospholipase C, epsilon 1 [Homo sapiens] 30 7.3
gi|4557701 keratin 17 [Homo sapiens] 30 7.3
gi|5031653 breast carcinoma amplified sequence 2 [Homo sapiens] 30 7.3
gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens] 30 9.5
gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens] 30 9.5
gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens] 30 9.5
>gi|85067501 arachidonate 15-lipoxygenase, second type isoform d
[Homo sapiens]
Length = 676
Score = 1392 bits (3603), Expect = 0.0
Identities = 676/676 (100%), Positives = 676/676 (100%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED
Sbjct: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
Query: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE
Sbjct: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
Query: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK 180
GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK
Sbjct: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK 180
Query: 181 NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS 240
NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS
Sbjct: 181 NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS 240
Query: 241 QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT 300
QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT
Sbjct: 241 QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT 300
Query: 301 NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV 360
NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV
Sbjct: 301 NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV 360
Query: 361 RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELL 420
RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELL
Sbjct: 361 RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELL 420
Query: 421 IVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI 480
IVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI
Sbjct: 421 IVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI 480
Query: 481 WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ 540
WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ
Sbjct: 481 WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ 540
Query: 541 YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT 600
YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT
Sbjct: 541 YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT 600
Query: 601 CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL 660
CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL
Sbjct: 601 CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL 660
Query: 661 PYTYLDPPLIENSVSI 676
PYTYLDPPLIENSVSI
Sbjct: 661 PYTYLDPPLIENSVSI 676
>gi|85067499 arachidonate 15-lipoxygenase, second type isoform a
[Homo sapiens]
Length = 647
Score = 1320 bits (3416), Expect = 0.0
Identities = 647/676 (95%), Positives = 647/676 (95%), Gaps = 29/676 (4%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED
Sbjct: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
Query: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE
Sbjct: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
Query: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK 180
GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK
Sbjct: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK 180
Query: 181 NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS 240
NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS
Sbjct: 181 NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS 240
Query: 241 QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT 300
QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT
Sbjct: 241 QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT 300
Query: 301 NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV 360
NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV
Sbjct: 301 NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV 360
Query: 361 RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELL 420
RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFK
Sbjct: 361 RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFK-------------------- 400
Query: 421 IVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI 480
STGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI
Sbjct: 401 ---------STGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI 451
Query: 481 WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ 540
WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ
Sbjct: 452 WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ 511
Query: 541 YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT 600
YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT
Sbjct: 512 YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT 571
Query: 601 CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL 660
CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL
Sbjct: 572 CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL 631
Query: 661 PYTYLDPPLIENSVSI 676
PYTYLDPPLIENSVSI
Sbjct: 632 PYTYLDPPLIENSVSI 647
>gi|85067503 arachidonate 15-lipoxygenase, second type isoform b
[Homo sapiens]
Length = 602
Score = 1210 bits (3131), Expect = 0.0
Identities = 602/676 (89%), Positives = 602/676 (89%), Gaps = 74/676 (10%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED
Sbjct: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
Query: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE
Sbjct: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
Query: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK 180
GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK
Sbjct: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAK 180
Query: 181 NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS 240
NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS
Sbjct: 181 NANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFAS 240
Query: 241 QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT 300
QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT
Sbjct: 241 QFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQT 300
Query: 301 NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV 360
NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV
Sbjct: 301 NVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWV 360
Query: 361 RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELL 420
RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFK
Sbjct: 361 RNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFK-------------------- 400
Query: 421 IVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI 480
STGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI
Sbjct: 401 ---------STGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQI 451
Query: 481 WGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQ 540
W GIPSSLETREALVQ
Sbjct: 452 W---------------------------------------------GIPSSLETREALVQ 466
Query: 541 YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT 600
YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT
Sbjct: 467 YVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNAT 526
Query: 601 CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL 660
CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL
Sbjct: 527 CDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVL 586
Query: 661 PYTYLDPPLIENSVSI 676
PYTYLDPPLIENSVSI
Sbjct: 587 PYTYLDPPLIENSVSI 602
>gi|182765464 arachidonate lipoxygenase 3 [Homo sapiens]
Length = 711
Score = 728 bits (1878), Expect = 0.0
Identities = 369/717 (51%), Positives = 476/717 (66%), Gaps = 47/717 (6%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
MA +R+ V+TG AGT D +SV++VGT GESP LD +G++F G+ + ++V +
Sbjct: 1 MAVYRLCVTTGPYLRAGTLDNISVTLVGTCGESPKQRLDRMGRDFAPGSVQKYKVRCTAE 60
Query: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
+G +LLLRVHK D+W+C +T P G FPCYQW+EG T+ L+
Sbjct: 61 LGELLLLRVHKERYAF-----FRKDSWYCSRICVTEPDGSVSHFPCYQWIEGYCTVELRP 115
Query: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLEL-------- 172
GTA+ D P+L R EL+ARQE Y+WK Y PG+P +D + +++E
Sbjct: 116 GTARTICQDSLPLLLDHRTRELRARQECYRWKIYAPGFPCMVDVNSFQEMESDKKFALTK 175
Query: 173 ---------------------------------NIKYSTAKNANFYLQAGSAFAEMKIKG 199
N++YS K + A A MK++G
Sbjct: 176 TTTCVDQGDSSGNRYLPGFPMKIDIPSLMYMEPNVRYSATKTISLLFNAIPASLGMKLRG 235
Query: 200 LLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPK 259
LLDRKG W+ L++M+ IF +T ++ EHW ED FF Q+LNG+NPV++ LP
Sbjct: 236 LLDRKGSWKKLDDMQNIFWCHKTFTTKYVTEHWCEDHFFGYQYLNGVNPVMLHCISSLPS 295
Query: 260 NFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQTNVINGKPQFSAAPMTLLYQ 319
PVT+ MVA +LG T LQ ELE+G++FL D+ IL+ T+ +NG+ Q+ AAP+ LL+
Sbjct: 296 KLPVTNDMVAPLLGQDTCLQTELERGNIFLADYWILAEAPTHCLNGRQQYVAAPLCLLWL 355
Query: 320 SPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAKTWVRNAEFSFHEALTHLLHSHL 379
SP G L+PLAIQLSQTPGP+SPIFLPTD +WDWLLAKTWVRN+EF HE TH L +HL
Sbjct: 356 SPQ-GALVPLAIQLSQTPGPDSPIFLPTDSEWDWLLAKTWVRNSEFLVHENNTHFLCTHL 414
Query: 380 LPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIVPGQVVDRSTGIGIEGFS 439
L E F +ATLRQLP CHP++KLL+PHTRYTL +NT+AR L+ P +VD+ T IG +G
Sbjct: 415 LCEAFAMATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGLI 474
Query: 440 ELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDDGMQIWGAVERFVSEIIGIYYPSD 499
L+ + Y+ CLP+ +R RGV IP Y+YRDDG++IW A+E FVSEI+G YYPSD
Sbjct: 475 YLMSTGLAHFTYTNFCLPDSLRARGVLAIPNYHYRDDGLKIWAAIESFVSEIVGYYYPSD 534
Query: 500 ESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQYVTMVIFTCSAKHAAVSAG 559
SVQ D ELQAW EIF++ FL +ESSG PS L T +V+++T +IF CSA+HAAV++G
Sbjct: 535 ASVQQDSELQAWTGEIFAQAFLGRESSGFPSRLCTPGEMVKFLTAIIFNCSAQHAAVNSG 594
Query: 560 QFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPPVNATCDVILALWLLSKEPGDQRP 619
Q D AWMPN P SM+ PPP +KG T + ++ TLP VN +C+ +L WL+S+EP DQRP
Sbjct: 595 QHDFGAWMPNAPSSMRQPPPQTKGTTTLKTYLDTLPEVNISCNNLLLFWLVSQEPKDQRP 654
Query: 620 LGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQGLVLPYTYLDPPLIENSVSI 676
LGTYPDEHFTEEAPRRSIA FQSRLAQISR IQERNQGL LPYTYLDPPLIENSVSI
Sbjct: 655 LGTYPDEHFTEEAPRRSIAAFQSRLAQISRDIQERNQGLALPYTYLDPPLIENSVSI 711
>gi|4502053 arachidonate 12-lipoxygenase, 12R type [Homo sapiens]
Length = 701
Score = 694 bits (1792), Expect = 0.0
Identities = 342/707 (48%), Positives = 468/707 (66%), Gaps = 37/707 (5%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
MA ++VRV+TG +GT D +S++IVGT+GES L++ G++F GA + V P+D
Sbjct: 1 MATYKVRVATGTDLLSGTRDSISLTIVGTQGESHKQLLNHFGRDFATGAVGQYTVQCPQD 60
Query: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQE 120
+G ++++R+HK D W+C + Q+ P G FP YQW++G TL L+E
Sbjct: 61 LGELIIIRLHKERYAF-----FPKDPWYCNYVQICAPNGRIYHFPAYQWMDGYETLALRE 115
Query: 121 GTAKVSWADHHPVLQQQRQEELQARQEMYQWKA--------------------------- 153
T K + D PVL + R+EE++A+Q+ Y W+
Sbjct: 116 ATGKTTADDSLPVLLEHRKEEIRAKQDFYHWRVFLPGLPSYVHIPSYRPPVRRHRNPNRP 175
Query: 154 ----YNPGWPHCLDEKTVEDLELNIKYSTAKNANFYLQAGSAFAEMKIKGLLDRKGLWRS 209
Y PG+P ++ K + L LN++YS K A+F+++ G K++GLLD K W+
Sbjct: 176 EWNGYIPGFPILINFKATKFLNLNLRYSFLKTASFFVRLGPMALAFKVRGLLDCKHSWKR 235
Query: 210 LNEMKRIFNFRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPKNFPVTDAMVA 269
L ++++IF +++ +E+ EHW ED FF Q+LNG+NP LIRRC +P FPVTD MVA
Sbjct: 236 LKDIRKIFPGKKSVVSEYVAEHWAEDTFFGYQYLNGVNPGLIRRCTRIPDKFPVTDDMVA 295
Query: 270 SVLGPGTSLQAELEKGSLFLVDHGILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPL 329
LG GT LQAELEKG+++L D+ I+ GI T ++G+ Q AP+ LL+ P G ++P+
Sbjct: 296 PFLGEGTCLQAELEKGNIYLADYRIMEGIPTVELSGRKQHHCAPLCLLHFGPE-GKMMPI 354
Query: 330 AIQLSQTPGPNSPIFLPTDDKWDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATL 389
AIQLSQTPGP+ PIFLP+D +WDWLLAKTWVR AEF HEA+ HLL +HL+ E F LA L
Sbjct: 355 AIQLSQTPGPDCPIFLPSDSEWDWLLAKTWVRYAEFYSHEAIAHLLETHLIAEAFCLALL 414
Query: 390 RQLPHCHPLFKLLIPHTRYTLHINTLARELLIVPGQVVDRSTGIGIEGFSELIQRNMKQL 449
R LP CHPL+KLLIPHTRYT+ IN++ R +L+ G + + +G+EGF+ ++ R + +L
Sbjct: 415 RNLPMCHPLYKLLIPHTRYTVQINSIGRAVLLNEGGLSAKGMSLGVEGFAGVMVRALSEL 474
Query: 450 NYSLLCLPEDIRTRGVEDIPGYYYRDDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQ 509
Y L LP D RGV+D+PGYYYRDD + +W A+E++V+EII YYPSD +V+ D ELQ
Sbjct: 475 TYDSLYLPNDFVERGVQDLPGYYYRDDSLAVWNALEKYVTEIITYYYPSDAAVEGDPELQ 534
Query: 510 AWVREIFSKGFLNQESSGIPSSLETREALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPN 569
+WV+EIF + L +ESSG P L T L++YVT+VI+TCSAKHAAV+ GQ + AWMPN
Sbjct: 535 SWVQEIFKECLLGRESSGFPRCLRTVPELIRYVTIVIYTCSAKHAAVNTGQMEFTAWMPN 594
Query: 570 LPPSMQLPPPTSKGLATCEGFIATLPPVNATCDVILALWLLSKEPGDQRPLGTYPDEHFT 629
P SM+ PP +KGL T E F+ TLP V TC +L LW LS+EP D+RPLG +PD HF
Sbjct: 595 FPASMRNPPIQTKGLTTLETFMDTLPDVKTTCITLLVLWTLSREPDDRRPLGHFPDIHFV 654
Query: 630 EEAPRRSIATFQSRLAQISRGIQERNQGLVLPYTYLDPPLIENSVSI 676
EEAPRRSI F+ RL QIS I++RN+ L +PY YLDP LIENS+SI
Sbjct: 655 EEAPRRSIEAFRQRLNQISHDIRQRNKCLPIPYYYLDPVLIENSISI 701
>gi|4502057 arachidonate 5-lipoxygenase [Homo sapiens]
Length = 674
Score = 557 bits (1435), Expect = e-158
Identities = 288/682 (42%), Positives = 426/682 (62%), Gaps = 14/682 (2%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDN-LGKEFTAGAEEDFQVTLPE 59
M + V V+TG + AGT D + +S+VG+ G S LD +F GA + + VT+ E
Sbjct: 1 MPSYTVTVATGSQWFAGTDDYIYLSLVGSAGCSEKHLLDKPFYNDFERGAVDSYDVTVDE 60
Query: 60 DVGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHLLFPCYQWLEGAGTLVLQ 119
++G + L+R+ K L D W+ ++ L P G ++ FPCY+W+ G +VL+
Sbjct: 61 ELGEIQLVRIEKRKYWLN-------DDWYLKYITLKTPHGDYIEFPCYRWITGDVEVVLR 113
Query: 120 EGTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTA 179
+G AK++ D +L+Q R++EL+ RQ+ Y+W +NPG+P +D K +DL +I++ +
Sbjct: 114 DGRAKLARDDQIHILKQHRRKELETRQKQYRWMEWNPGFPLSIDAKCHKDLPRDIQFDSE 173
Query: 180 KNANFYLQAGSAFAEMKIKGLLDR-KGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFF 238
K +F L A + I + + W + ++IF +E HWQED F
Sbjct: 174 KGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIFVKISNTISERVMNHWQEDLMF 233
Query: 239 ASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGI 298
QFLNG NPVLIRRC LP+ PVT MV L SL+ E+++G++F+VD +L GI
Sbjct: 234 GYQFLNGCNPVLIRRCTELPEKLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGI 293
Query: 299 QTNVINGKP-QFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLPTDDKWDWLLAK 357
N + QF AAP+ LLY++ ++P+AIQL+Q PG +PIFLP+D K+DWLLAK
Sbjct: 294 DANKTDPCTLQFLAAPICLLYKNLA-NKIVPIAIQLNQIPGDENPIFLPSDAKYDWLLAK 352
Query: 358 TWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLAR 417
WVR+++F H+ +THLL +HL+ EVF +A RQLP HP+FKLL+ H R+T+ INT AR
Sbjct: 353 IWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAR 412
Query: 418 ELLIVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVE---DIPGYYYR 474
E LI + D++ G G +++QR MK L Y+ LC PE I+ RG+E DIP Y+YR
Sbjct: 413 EQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKEDIPYYFYR 472
Query: 475 DDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLET 534
DDG+ +W A+ F +E++ IYY D+ V++D ELQ +V +++ G ++SSG P S+++
Sbjct: 473 DDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKS 532
Query: 535 REALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATL 594
RE L +Y+T+VIFT SA+HAAV+ GQ+D C+W+PN PP+M+ PPPT+KG+ T E + TL
Sbjct: 533 REQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTL 592
Query: 595 PPVNATCDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQER 654
P +C + A+W LS+ ++ LG YP+EHF E+ + ++A F+ L I I ER
Sbjct: 593 PDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNLEAIVSVIAER 652
Query: 655 NQGLVLPYTYLDPPLIENSVSI 676
N+ LPY YL P I NSV+I
Sbjct: 653 NKKKQLPYYYLSPDRIPNSVAI 674
>gi|154426292 arachidonate 12-lipoxygenase [Homo sapiens]
Length = 663
Score = 467 bits (1202), Expect = e-131
Identities = 255/680 (37%), Positives = 384/680 (56%), Gaps = 21/680 (3%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
M +R+RV+TG +G++++V + +VGTRGE+ L G EE+F + ED
Sbjct: 1 MGRYRIRVATGAWLFSGSYNRVQLWLVGTRGEAEL----ELQLRPARGEEEEFDHDVAED 56
Query: 61 VGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRG-GHLLFPCYQWLEGAGTLVLQ 119
+G + +R+ K L DAWFC + P + FPCY+W++G L L
Sbjct: 57 LGLLQFVRLRKHHW-------LVDDAWFCDRITVQGPGACAEVAFPCYRWVQGEDILSLP 109
Query: 120 EGTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTA 179
EGTA++ + + Q+ R++EL+ RQ++Y W + G P + +DL N+++
Sbjct: 110 EGTARLPGDNALDMFQKHREKELKDRQQIYCWATWKEGLPLTIAADRKDDLPPNMRFHEE 169
Query: 180 KNANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAFFA 239
K +F + EM +K + W L + +IF +++ AE + WQ+D F+
Sbjct: 170 KRLDFEWTLKAGALEMALKRVYTLLSSWNCLEDFDQIFWGQKSALAEKVRQCWQDDELFS 229
Query: 240 SQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSLQAELEKGSLFLVDHGILSGIQ 299
QFLNG NP+L+RR LP + M L+ EL+ GSLF D +L GI
Sbjct: 230 YQFLNGANPMLLRRSTSLPSRLVLPSGMEELQ----AQLEKELQNGSLFEADFILLDGIP 285
Query: 300 TNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSP---IFLPTDDKWDWLLA 356
NVI G+ Q+ AAP+ +L P G L P+ IQ+ Q P P+SP +FLP+D WLLA
Sbjct: 286 ANVIRGEKQYLAAPLVMLKMEPN-GKLQPMVIQI-QPPNPSSPTPTLFLPSDPPLAWLLA 343
Query: 357 KTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLA 416
K+WVRN++F HE HLL++HL+ EV +AT+R LP HP+FK LIPH RYT+ INT A
Sbjct: 344 KSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRA 403
Query: 417 RELLIVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPGYYYRDD 476
R LI G + D++ G G +L++R QL Y LC P+D+ RG+ +PG Y D
Sbjct: 404 RTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLTYCSLCPPDDLADRGLLGLPGALYAHD 463
Query: 477 GMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETRE 536
+++W + R+V I+ ++Y D+ V+ D ELQAW REI G + G P S +++
Sbjct: 464 ALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQS 523
Query: 537 ALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGFIATLPP 596
L ++TM +FTC+A+HAA++ GQ D AW+PN P +M++PPPT+K T + +LP
Sbjct: 524 QLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKEDVTMATVMGSLPD 583
Query: 597 VNATCDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRGIQERNQ 656
V C + W LS+ D PLG + +++F+ P+ + F++ L ++ + I RN+
Sbjct: 584 VRQACLQMAISWHLSRRQPDMVPLGHHKEKYFSGPKPKAVLNQFRTDLEKLEKEITARNE 643
Query: 657 GLVLPYTYLDPPLIENSVSI 676
L PY YL P IENSV+I
Sbjct: 644 QLDWPYEYLKPSCIENSVTI 663
>gi|40316937 arachidonate 15-lipoxygenase [Homo sapiens]
Length = 662
Score = 458 bits (1178), Expect = e-129
Identities = 259/686 (37%), Positives = 384/686 (55%), Gaps = 34/686 (4%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEF--TAGAEEDFQVTLP 58
M +R+RVSTG + AG+ ++V + +VG GE+ LGK G E + +V +P
Sbjct: 1 MGLYRIRVSTGASLYAGSNNQVQLWLVGQHGEAA------LGKRLWPARGKETELKVEVP 54
Query: 59 EDVGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG-HLLFPCYQWLEGAGTLV 117
E +G +L +++ K L DAWFC W + P G + FPCY+W+EG G L
Sbjct: 55 EYLGPLLFVKLRKRHL-------LKDDAWFCNWISVQGPGAGDEVRFPCYRWVEGNGVLS 107
Query: 118 LQEGTAKVSWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYS 177
L EGT + D + Q+ R+EEL+ R+++Y+W + G + + DL ++ ++
Sbjct: 108 LPEGTGRTVGEDPQGLFQKHREEELEERRKLYRWGNWKDGLILNMAGAKLYDLPVDERFL 167
Query: 178 TAKNANFYLQAGSAFAEMKIKGLLDRKGLWRSLNEMKRIFNFRRTPAAEHAFEHWQEDAF 237
K +F + A++ IK L+ W+ L++ RIF ++ AE + W+EDA
Sbjct: 168 EDKRVDFEVSLAKGLADLAIKDSLNVLTCWKDLDDFNRIFWCGQSKLAERVRDSWKEDAL 227
Query: 238 FASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTS-LQAELEK----GSLFLVDH 292
F QFLNG NPV++RR +LP V PG LQA+LEK G+LF D
Sbjct: 228 FGYQFLNGANPVVLRRSAHLPARL---------VFPPGMEELQAQLEKELEGGTLFEADF 278
Query: 293 GILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLS--QTPGPNSPIFLPTDDK 350
+L GI+ NVI Q AAP+ +L P G LLP+ IQL +T P P+FLPTD
Sbjct: 279 SLLDGIKANVILCSQQHLAAPLVMLKLQPD-GKLLPMVIQLQLPRTGSPPPPLFLPTDPP 337
Query: 351 WDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTL 410
WLLAK WVR+++F HE +HLL HL+ EV +AT+R LP HP+FKL+IPH RYTL
Sbjct: 338 MAWLLAKCWVRSSDFQLHELQSHLLRGHLMAEVIVVATMRCLPSIHPIFKLIIPHLRYTL 397
Query: 411 HINTLARELLIVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRGVEDIPG 470
IN AR L+ + D+ G G +L+++ L YS C P+D+ RG+ +
Sbjct: 398 EINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGLLGVKS 457
Query: 471 YYYRDDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPS 530
+Y D +++W + R+V I+ ++Y +D +V+DD ELQ W REI G + G P
Sbjct: 458 SFYAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPV 517
Query: 531 SLETREALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPNLPPSMQLPPPTSKGLATCEGF 590
SL+ R+ + +VTM IFTC+ +HA+V GQ D +W+PN P +M+LPPPT+K AT E
Sbjct: 518 SLQARDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVPNAPCTMRLPPPTTKD-ATLETV 576
Query: 591 IATLPPVNATCDVILALWLLSKEPGDQRPLGTYPDEHFTEEAPRRSIATFQSRLAQISRG 650
+ATLP + + W L + +G + +E+F+ P+ + F+ LA + +
Sbjct: 577 MATLPNFHQASLQMSITWQLGRRQPVMVAVGQHEEEYFSGPEPKAVLKKFREELAALDKE 636
Query: 651 IQERNQGLVLPYTYLDPPLIENSVSI 676
I+ RN L +PY YL P ++ENSV+I
Sbjct: 637 IEIRNAKLDMPYEYLRPSVVENSVAI 662
>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo
sapiens]
Length = 2211
Score = 41.6 bits (96), Expect = 0.002
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 3 EFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPEDVG 62
++ V+V TG+ GAGT V ++I G G++ L+N F GAE+ F + P D+G
Sbjct: 173 KYEVKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDRFILDAP-DLG 231
Query: 63 RVLLLRV 69
+++ + V
Sbjct: 232 QLMKINV 238
Score = 40.0 bits (92), Expect = 0.007
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPED 60
+ + V + TG+ GAGT +V + I G +G++ L L + K F +++ FQ+ D
Sbjct: 813 LVHYEVEIWTGDVGGAGTSARVYMQIYGEKGKTEVLFLSSRSKVFERASKDTFQLE-AAD 871
Query: 61 VGRVLLLRV 69
VG V LR+
Sbjct: 872 VGEVYKLRL 880
Score = 35.8 bits (81), Expect = 0.13
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 22/114 (19%)
Query: 6 VRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPEDVGRVL 65
V V TG+ GAGT K+ + + G RG N GK F G D GR
Sbjct: 300 VTVFTGDVRGAGTKSKIYLVMYGARGNK------NSGKIFLEGG--------VFDRGRTD 345
Query: 66 LLRVHKAPPVLPLL------GPLAPD-AWFC-RWFQLTPPRGGHLLFPCYQWLE 111
+ + A + PL G + + WFC + L P G FPC WL+
Sbjct: 346 IFHIELAVLLSPLSRVSVGHGNVGVNRGWFCEKVVILCPFTGIQQTFPCSNWLD 399
Score = 34.7 bits (78), Expect = 0.30
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 4 FRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKE-FTAGAEEDFQVTLPEDVG 62
+ V +TG+ GAGT V +++ G G SP L L + K F G + F+V +VG
Sbjct: 45 YEVVTATGDVRGAGTDANVFITLFGENGLSPKLQLTSKSKSAFEKGNVDVFRVR-TNNVG 103
Query: 63 RVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGGHL--LFPCYQWL 110
+ +R+ L +W+ +T + HL F C WL
Sbjct: 104 LIYKVRIEHDNTGLNA-------SWYLDHVIVTDMKRPHLRYYFNCNNWL 146
Score = 31.2 bits (69), Expect = 3.3
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
Query: 4 FRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPE--DV 61
F V + TG AGT V +++ GT+ ++ L + + ++ E D+
Sbjct: 1177 FSVTIKTGVKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDL 1236
Query: 62 GRVLLLRV-----HKAPPVLPLLGPLAPDAWFCRWFQL-TPPRGGHLLFPCYQWL 110
G + +R+ KAP WF W ++ P G + FPC +WL
Sbjct: 1237 GDLWKVRLGHDNTGKAP------------GWFVDWVEVDAPSLGKCMTFPCGRWL 1279
Score = 30.0 bits (66), Expect = 7.3
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 18/119 (15%)
Query: 1 MAEFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKE---FTAGAEEDFQV-- 55
MA + V V TGE GAGT V + + G G++ L N F G ++F +
Sbjct: 552 MARYHVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFEKGNADEFTIES 611
Query: 56 TLPEDVGRVLLLRVHKAPPVLPLLGPLAPDAWFCRWFQLT---PPRGGHLLFPCYQWLE 111
+V RV + K + W+ + P ++ FPC +WL+
Sbjct: 612 VTMRNVRRVRIRHDGKG----------SGSGWYLDRVLVREEGQPESDNVEFPCLRWLD 660
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 33.5 bits (75), Expect = 0.66
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 311 AAPMTLLYQSPG---CGPLLPLAIQLSQTPGPNSPIFLP 346
A+P L SPG C PL P + QLS GP P FLP
Sbjct: 774 ASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLP 812
>gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens]
Length = 376
Score = 33.5 bits (75), Expect = 0.66
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 293 GILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSPIFLP 346
G S +N PQ SAAP T ++P GPL P S+ PG +SP+ +P
Sbjct: 279 GASSSAAPPTLNPAPQKSAAPGTAPEEAP--GPLPPPPTPSSEDPGFSSPLGMP 330
>gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 484
Score = 32.7 bits (73), Expect = 1.1
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 11 GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66
GE G G ++ + G R E+ + LD LG+E E Q + E + RV L
Sbjct: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
Query: 67 LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100
+ +HK P+L L P + DA R L PP G
Sbjct: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
>gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo
sapiens]
Length = 484
Score = 32.7 bits (73), Expect = 1.1
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 11 GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66
GE G G ++ + G R E+ + LD LG+E E Q + E + RV L
Sbjct: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
Query: 67 LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100
+ +HK P+L L P + DA R L PP G
Sbjct: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
>gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo
sapiens]
Length = 484
Score = 32.7 bits (73), Expect = 1.1
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 11 GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66
GE G G ++ + G R E+ + LD LG+E E Q + E + RV L
Sbjct: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
Query: 67 LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100
+ +HK P+L L P + DA R L PP G
Sbjct: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 32.3 bits (72), Expect = 1.5
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 219 FRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSL 278
F +P +E F ED+ F F G P L + + PVT S PG+SL
Sbjct: 37 FEHSPLSEDRFSKLNEDSDFI--FKRG-PPGLPPQNFSMSVTVPVTSPNALSYTNPGSSL 93
Query: 279 QAELEKGSLFLVDHGILSGIQT----NVINGKPQ 308
+ S L D +LS QT NV G PQ
Sbjct: 94 VSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQ 127
>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
Length = 437
Score = 32.3 bits (72), Expect = 1.5
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 219 FRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSL 278
F +P +E F ED+ F F G P L + + PVT S PG+SL
Sbjct: 37 FEHSPLSEDRFSKLNEDSDFI--FKRG-PPGLPPQNFSMSVTVPVTSPNALSYTNPGSSL 93
Query: 279 QAELEKGSLFLVDHGILSGIQT----NVINGKPQ 308
+ S L D +LS QT NV G PQ
Sbjct: 94 VSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQ 127
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 32.3 bits (72), Expect = 1.5
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 219 FRRTPAAEHAFEHWQEDAFFASQFLNGLNPVLIRRCHYLPKNFPVTDAMVASVLGPGTSL 278
F +P +E F ED+ F F G P L + + PVT S PG+SL
Sbjct: 105 FEHSPLSEDRFSKLNEDSDFI--FKRG-PPGLPPQNFSMSVTVPVTSPNALSYTNPGSSL 161
Query: 279 QAELEKGSLFLVDHGILSGIQT----NVINGKPQ 308
+ S L D +LS QT NV G PQ
Sbjct: 162 VSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQ 195
>gi|224458288 lipoxygenase homology domains 1 isoform 2 [Homo
sapiens]
Length = 1114
Score = 31.2 bits (69), Expect = 3.3
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
Query: 4 FRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPE--DV 61
F V + TG AGT V +++ GT+ ++ L + + ++ E D+
Sbjct: 66 FSVTIKTGVKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDL 125
Query: 62 GRVLLLRV-----HKAPPVLPLLGPLAPDAWFCRWFQL-TPPRGGHLLFPCYQWL 110
G + +R+ KAP WF W ++ P G + FPC +WL
Sbjct: 126 GDLWKVRLGHDNTGKAP------------GWFVDWVEVDAPSLGKCMTFPCGRWL 168
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 30.8 bits (68), Expect = 4.3
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 550 SAKHAAVSAGQFDSCAWMP----NLPPSMQLPPPTSKGLAT 586
S++H+++S G+ D C + + PP+ LPPP G T
Sbjct: 162 SSRHSSISEGEGDRCGFAEPPGGSSPPAPPLPPPPKPGSPT 202
>gi|155969714 nuclear protein, ataxia-telangiectasia locus [Homo
sapiens]
Length = 1427
Score = 30.4 bits (67), Expect = 5.6
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 128 ADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAKNANFYLQ 187
+++H VL+Q+ QE Q KA+ P T + +++I + + N N + Q
Sbjct: 402 SNNHDVLRQEDQENFSQISTSIQKKAFKTAVP------TEQKCDIDITFESVPNLNDFNQ 455
Query: 188 AGSAFAE 194
G++ AE
Sbjct: 456 RGNSNAE 462
>gi|117168250 phospholipase C, epsilon 1 [Homo sapiens]
Length = 2302
Score = 30.0 bits (66), Expect = 7.3
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 WFQLTPPRGGHLLFPCYQWLEGAGTL-VLQEGTAKVSWADHHPVLQQQRQEELQ 143
W + R G LL PC + +E T+ + Q+G+ ++S A +P+ R+EE +
Sbjct: 361 WSYIDQKRNGPLL-PCGRVMEPPSTVEIRQDGSQRLSEAQWYPIYNAVRREETE 413
>gi|4557701 keratin 17 [Homo sapiens]
Length = 432
Score = 30.0 bits (66), Expect = 7.3
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 126 SWADHHPVLQQQRQEELQARQEMYQWKAYNPGWPHCLDEKTVEDLELNIKYSTAKNANFY 185
S+ D L++ E ++ YQ +A P + +T+E+L+ I +T NAN
Sbjct: 97 SYLDKVRALEEANTELEVKIRDWYQRQAPGPARDYSQYYRTIEELQNKILTATVDNANIL 156
Query: 186 LQAGSA 191
LQ +A
Sbjct: 157 LQIDNA 162
>gi|5031653 breast carcinoma amplified sequence 2 [Homo sapiens]
Length = 225
Score = 30.0 bits (66), Expect = 7.3
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 141 ELQARQEMYQWKAYNPGWPHCLD--EKTVEDLELNIKYSTAKNANFYLQAGSAFAEMK 196
EL ++ WK YN H ++ +K ++ L +I+ + N L AGS EM+
Sbjct: 125 ELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREME 182
>gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]
Length = 4302
Score = 29.6 bits (65), Expect = 9.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 3 EFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPEDVG 62
++ + V TG G+GT V + + G S LD + F + + F++ P +G
Sbjct: 3119 KYEILVKTGWGRGSGTTAHVGIMLYGVDSRSGHRHLDG-DRAFHRNSLDIFRIATPHSLG 3177
Query: 63 RVLLLRV 69
V +RV
Sbjct: 3178 SVWKIRV 3184
>gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
Length = 4303
Score = 29.6 bits (65), Expect = 9.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 3 EFRVRVSTGEAFGAGTWDKVSVSIVGTRGESPPLPLDNLGKEFTAGAEEDFQVTLPEDVG 62
++ + V TG G+GT V + + G S LD + F + + F++ P +G
Sbjct: 3119 KYEILVKTGWGRGSGTTAHVGIMLYGVDSRSGHRHLDG-DRAFHRNSLDIFRIATPHSLG 3177
Query: 63 RVLLLRV 69
V +RV
Sbjct: 3178 SVWKIRV 3184
>gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]
Length = 479
Score = 29.6 bits (65), Expect = 9.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 320 SPGCGPLLPLAIQLSQTPGPNSPIFLP 346
S C P LPL PGPN P FLP
Sbjct: 327 SRDCHPALPLPPGFHPHPGPNYPSFLP 353
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,908,933
Number of Sequences: 37866
Number of extensions: 1411166
Number of successful extensions: 3663
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3609
Number of HSP's gapped (non-prelim): 46
length of query: 676
length of database: 18,247,518
effective HSP length: 109
effective length of query: 567
effective length of database: 14,120,124
effective search space: 8006110308
effective search space used: 8006110308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.