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Search of human proteins with 82659105
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82659105 protein tyrosine phosphatase-like, member A [Homo
sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|82659105 protein tyrosine phosphatase-like, member A [Homo sa... 580 e-166
gi|38257153 protein tyrosine phosphatase-like (proline instead o... 325 2e-89
gi|117168248 protein tyrosine phosphatase-like A domain containi... 100 3e-21
gi|148226324 protein tyrosine phosphatase-like A domain containi... 83 2e-16
gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo ... 35 0.100
gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo ... 35 0.100
gi|239752944 PREDICTED: hypothetical protein [Homo sapiens] 32 0.84
gi|239747474 PREDICTED: hypothetical protein XP_002347534 [Homo ... 32 0.84
gi|239741346 PREDICTED: hypothetical protein XP_002342203 [Homo ... 32 0.84
gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens] 31 1.4
gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens] 31 1.4
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 31 1.4
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 31 1.4
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 31 1.4
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 31 1.4
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 31 1.4
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 31 1.4
gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens] 30 1.9
gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens] 30 1.9
gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens] 30 1.9
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 30 1.9
gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 30 1.9
gi|77176455 DNA cytosine methyltransferase 3 alpha isoform b [Ho... 30 1.9
gi|239755851 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239750367 PREDICTED: hypothetical protein XP_002347407 [Homo ... 30 2.5
gi|239744671 PREDICTED: hypothetical protein XP_002343233 [Homo ... 30 2.5
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens] 30 2.5
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens] 30 2.5
gi|66529407 tensin [Homo sapiens] 30 3.2
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 30 3.2
>gi|82659105 protein tyrosine phosphatase-like, member A [Homo
sapiens]
Length = 288
Score = 580 bits (1496), Expect = e-166
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MGRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE 60
MGRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE
Sbjct: 1 MGRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE 60
Query: 61 APGERRRLGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQT 120
APGERRRLGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQT
Sbjct: 61 APGERRRLGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQT 120
Query: 121 FALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEI 180
FALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEI
Sbjct: 121 FALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEI 180
Query: 181 TRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPN 240
TRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPN
Sbjct: 181 TRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPN 240
Query: 241 KYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVLHGEVIVEKDD 288
KYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVLHGEVIVEKDD
Sbjct: 241 KYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVLHGEVIVEKDD 288
>gi|38257153 protein tyrosine phosphatase-like (proline instead of
catalytic arginine), member b [Homo sapiens]
Length = 254
Score = 325 bits (834), Expect = 2e-89
Identities = 152/244 (62%), Positives = 196/244 (80%), Gaps = 3/244 (1%)
Query: 37 AATMASSDEDGTNGGASEAGEDREAPGERRRLGV--LATAWLTFYDIAMTAGWLVLAIAM 94
AA A++ G GG AG +A G R++ G LATA+L Y++ MTAGWLV+A+ +
Sbjct: 2 AAVAATAAAKGNGGGGGRAGAG-DASGTRKKKGPGPLATAYLVIYNVVMTAGWLVIAVGL 60
Query: 95 VRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWL 154
VR Y+ KG++ LY SI+K LKFFQT ALLEI+HC IGIVP+SV++T QV SR+F++W
Sbjct: 61 VRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWA 120
Query: 155 ITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGV 214
+THS+K +Q+E+SV+LF++AWT+TEI RYSFYTFSLL+HLPY IKWARY FI+LYP+GV
Sbjct: 121 VTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGV 180
Query: 215 AGELLTIYAALPHVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQR 274
+GELLTIYAALP V++ G++SI LPNKYN SFDYY FL++ M SYIP+FPQLYFHM+ QR
Sbjct: 181 SGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQR 240
Query: 275 RKVL 278
RK+L
Sbjct: 241 RKIL 244
>gi|117168248 protein tyrosine phosphatase-like A domain containing
1 [Homo sapiens]
Length = 362
Score = 99.8 bits (247), Expect = 3e-21
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 8/222 (3%)
Query: 60 EAPGERRRLGVLATAWLTFYDIAMTAG--WLVLAIAMVRFYMEKGTHRGLYKSIQKTLKF 117
E+ G L L +L Y++ G W+ + + + + K + + ++ + F
Sbjct: 134 ESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYF 193
Query: 118 FQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTV 177
Q A++E ++ IG+ + V+ + +Q+ R F++++I +++ +QN+ V W+
Sbjct: 194 CQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSA 253
Query: 178 TEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIR 237
EI RYSFY + +D + W RY +I LYP+G E +++ ++P +TG FS
Sbjct: 254 IEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFT 313
Query: 238 LPNKYNVSFDYYYFLLITMASYIPLFPQLYF---HMLRQRRK 276
LP + + +FL I + I +F LY H+ +QRR+
Sbjct: 314 LPYPVKIKVRFSFFLQIYL---IMIFLGLYINFRHLYKQRRR 352
>gi|148226324 protein tyrosine phosphatase-like A domain containing
2 [Homo sapiens]
Length = 232
Score = 83.2 bits (204), Expect = 2e-16
Identities = 50/210 (23%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 74 AWLTFYDIAMTAG--WLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLI 131
A+L Y + G W+ + + F K + + +I ++ Q+ +LLE++H +
Sbjct: 18 AYLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYV 77
Query: 132 GIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLL 191
GI ++ +Q++ RI +++++ S + +Q + V + V W + ++ RY++ S++
Sbjct: 78 GIESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNLLDMVRYTYSMLSVI 137
Query: 192 DHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSFDYYYF 251
+ W ++ +YP+ V E IY +LP+ + G +S +LP ++ F Y
Sbjct: 138 GISYAVLTWLSQTLWMPIYPLCVLAEAFAIYQSLPYFESFGTYSTKLPFDLSIYFPYVLK 197
Query: 252 LLITMASYIPLFPQLYF---HMLRQRRKVL 278
+ + M LF +YF H+ +RR +L
Sbjct: 198 IYLMM-----LFIGMYFTYSHLYSERRDIL 222
>gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 34.7 bits (78), Expect = 0.100
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 117 FFQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESV------VL 170
+F T L +V CLIG VP+ ++ T ++ + + K I N + V
Sbjct: 1096 YFYTVKFLAVVFCLIGYVPSVILFT-----------YIASFTFKKILNTKEFWSFIYSVA 1144
Query: 171 FLVAWTVTEITRYSFYTFSLLDHLPYFI 198
L +TEIT + YT + + H + I
Sbjct: 1145 ALACIAITEITFFMGYTIATILHYAFCI 1172
>gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 34.7 bits (78), Expect = 0.100
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 117 FFQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESV------VL 170
+F T L +V CLIG VP+ ++ T ++ + + K I N + V
Sbjct: 1096 YFYTVKFLAVVFCLIGYVPSVILFT-----------YIASFTFKKILNTKEFWSFIYSVA 1144
Query: 171 FLVAWTVTEITRYSFYTFSLLDHLPYFI 198
L +TEIT + YT + + H + I
Sbjct: 1145 ALACIAITEITFFMGYTIATILHYAFCI 1172
>gi|239752944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 96
Score = 31.6 bits (70), Expect = 0.84
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 EAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMA 41
EAA AG G+ G A SP L+P + RC+A+MA
Sbjct: 53 EAAVAGGGA-TGGTASSPGVAPSLAPAAGRCSASMA 87
>gi|239747474 PREDICTED: hypothetical protein XP_002347534 [Homo
sapiens]
Length = 96
Score = 31.6 bits (70), Expect = 0.84
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 EAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMA 41
EAA AG G+ G A SP L+P + RC+A+MA
Sbjct: 53 EAAVAGGGA-TGGTASSPGVAPSLAPAAGRCSASMA 87
>gi|239741346 PREDICTED: hypothetical protein XP_002342203 [Homo
sapiens]
Length = 96
Score = 31.6 bits (70), Expect = 0.84
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 EAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMA 41
EAA AG G+ G A SP L+P + RC+A+MA
Sbjct: 53 EAAVAGGGA-TGGTASSPGVAPSLAPAAGRCSASMA 87
>gi|223468622 makorin ring finger protein 1 isoform 2 [Homo
sapiens]
Length = 329
Score = 30.8 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 5 TEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGG 51
T A +G+G+ AA A + PT +P + T+P A DG+ GG
Sbjct: 9 TTATTSGAGAAAATAAAASPTPIP-TVTAPSLGAGGGGGGSDGSGGG 54
>gi|223468620 makorin ring finger protein 1 isoform 1 [Homo
sapiens]
Length = 482
Score = 30.8 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 5 TEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGG 51
T A +G+G+ AA A + PT +P + T+P A DG+ GG
Sbjct: 9 TTATTSGAGAAAATAAAASPTPIP-TVTAPSLGAGGGGGGSDGSGGG 54
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 GRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDREA 61
G+ ++ AA + ++ + G+ P P T P A A E+ + + E+ + EA
Sbjct: 289 GKTSQVGAASAPAKESPRKGAAPA--PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEA 346
Query: 62 PGERRRLG 69
P + + G
Sbjct: 347 PAQAKPSG 354
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 GRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDREA 61
G+ ++ AA + ++ + G+ P P T P A A E+ + + E+ + EA
Sbjct: 366 GKTSQVGAASAPAKESPRKGAAPA--PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEA 423
Query: 62 PGERRRLG 69
P + + G
Sbjct: 424 PAQAKPSG 431
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 GRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDREA 61
G+ ++ AA + ++ + G+ P P T P A A E+ + + E+ + EA
Sbjct: 366 GKTSQVGAASAPAKESPRKGAAPA--PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEA 423
Query: 62 PGERRRLG 69
P + + G
Sbjct: 424 PAQAKPSG 431
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 GRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDREA 61
G+ ++ AA + ++ + G+ P P T P A A E+ + + E+ + EA
Sbjct: 289 GKTSQVGAASAPAKESPRKGAAPA--PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEA 346
Query: 62 PGERRRLG 69
P + + G
Sbjct: 347 PAQAKPSG 354
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 GRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDREA 61
G+ ++ AA + ++ + G+ P P T P A A E+ + + E+ + EA
Sbjct: 366 GKTSQVGAASAPAKESPRKGAAPA--PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEA 423
Query: 62 PGERRRLG 69
P + + G
Sbjct: 424 PAQAKPSG 431
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 GRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDREA 61
G+ ++ AA + ++ + G+ P P T P A A E+ + + E+ + EA
Sbjct: 366 GKTSQVGAASAPAKESPRKGAAPA--PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEA 423
Query: 62 PGERRRLG 69
P + + G
Sbjct: 424 PAQAKPSG 431
>gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 30.4 bits (67), Expect = 1.9
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 9 AAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE 60
AA SGS G+ +PP SP + T A+S + GG++ GED++
Sbjct: 163 AAHSGSHLFGFPPTPP-----KEVSPDPSTTGAASPASSSAGGSAARGEDKD 209
>gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 30.4 bits (67), Expect = 1.9
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 9 AAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE 60
AA SGS G+ +PP SP + T A+S + GG++ GED++
Sbjct: 163 AAHSGSHLFGFPPTPP-----KEVSPDPSTTGAASPASSSAGGSAARGEDKD 209
>gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens]
Length = 466
Score = 30.4 bits (67), Expect = 1.9
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 9 AAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE 60
AA SGS G+ +PP SP + T A+S + GG++ GED++
Sbjct: 163 AAHSGSHLFGFPPTPP-----KEVSPDPSTTGAASPASSSAGGSAARGEDKD 209
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 30.4 bits (67), Expect = 1.9
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 11 GSGSRAAGWAGSPPTLL-PLSPTSPRCAATMASSDEDGTNGGASEAGEDREAPGERRRLG 69
G G SPP + P P SP A T D + A++AG+D + R G
Sbjct: 232 GPGESQKVEEASPPAVQQPTDPASPTVATTPEPVGSDAGDKNATKAGDDEPEYEDGRGFG 291
Query: 70 VLATAW 75
+ W
Sbjct: 292 IGELVW 297
>gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 30.4 bits (67), Expect = 1.9
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 11 GSGSRAAGWAGSPPTLL-PLSPTSPRCAATMASSDEDGTNGGASEAGEDREAPGERRRLG 69
G G SPP + P P SP A T D + A++AG+D + R G
Sbjct: 232 GPGESQKVEEASPPAVQQPTDPASPTVATTPEPVGSDAGDKNATKAGDDEPEYEDGRGFG 291
Query: 70 VLATAW 75
+ W
Sbjct: 292 IGELVW 297
>gi|77176455 DNA cytosine methyltransferase 3 alpha isoform b [Homo
sapiens]
Length = 723
Score = 30.4 bits (67), Expect = 1.9
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 11 GSGSRAAGWAGSPPTLL-PLSPTSPRCAATMASSDEDGTNGGASEAGEDREAPGERRRLG 69
G G SPP + P P SP A T D + A++AG+D + R G
Sbjct: 43 GPGESQKVEEASPPAVQQPTDPASPTVATTPEPVGSDAGDKNATKAGDDEPEYEDGRGFG 102
Query: 70 VLATAW 75
+ W
Sbjct: 103 IGELVW 108
>gi|239755851 PREDICTED: hypothetical protein [Homo sapiens]
Length = 121
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 14 SRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGAS--EAGEDREAPGERRRLG 69
SR GWA P +P S A +E GT+G S + G RE +RR+ G
Sbjct: 53 SRLDGWARRLPAWVPRSLREQEEGAGRTREEEGGTSGRESRKKMGRGREWGRQRRKTG 110
>gi|239750367 PREDICTED: hypothetical protein XP_002347407 [Homo
sapiens]
Length = 121
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 14 SRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGAS--EAGEDREAPGERRRLG 69
SR GWA P +P S A +E GT+G S + G RE +RR+ G
Sbjct: 53 SRLDGWARRLPAWVPRSLREQEEGAGRTREEEGGTSGRESRKKMGRGREWGRQRRKTG 110
>gi|239744671 PREDICTED: hypothetical protein XP_002343233 [Homo
sapiens]
Length = 121
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 14 SRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGAS--EAGEDREAPGERRRLG 69
SR GWA P +P S A +E GT+G S + G RE +RR+ G
Sbjct: 53 SRLDGWARRLPAWVPRSLREQEEGAGRTREEEGGTSGRESRKKMGRGREWGRQRRKTG 110
>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
Length = 621
Score = 30.0 bits (66), Expect = 2.5
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 6 EAAAAGSGSR--AAGWAGSPPTLLPLSPTSPRCAA--TMASSDEDGTNGGASEAGEDREA 61
E A AG G AG AG+ P L + C A T A S+E + GG S + D
Sbjct: 113 ETAVAGVGHELGTAGDAGARPDL------AGTCQAELTAAGSEEPSSAGGLSSSCSDPSP 166
Query: 62 PGERRRLGVL 71
PGE L L
Sbjct: 167 PGESPSLDSL 176
>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
Length = 620
Score = 30.0 bits (66), Expect = 2.5
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 6 EAAAAGSGSR--AAGWAGSPPTLLPLSPTSPRCAA--TMASSDEDGTNGGASEAGEDREA 61
E A AG G AG AG+ P L + C A T A S+E + GG S + D
Sbjct: 113 ETAVAGVGHELGTAGDAGARPDL------AGTCQAELTAAGSEEPSSAGGLSSSCSDPSP 166
Query: 62 PGERRRLGVL 71
PGE L L
Sbjct: 167 PGESPSLDSL 176
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 29.6 bits (65), Expect = 3.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 63 GERRRLGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEK 101
G R R+GV+ A++ + +I+ +A + AM RFY +K
Sbjct: 115 GNRGRIGVVIAAYMHYSNISASADQALDRFAMKRFYEDK 153
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 29.6 bits (65), Expect = 3.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 1 MGRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAG 56
+G T AA + + A AG PP L + T+P + + A G GG ++ G
Sbjct: 1032 LGNNTSLMAAAAAAAAVAAAGGPPVL--TAQTNPFLSLSGAEGSGGGPKGGTADKG 1085
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,626,788
Number of Sequences: 37866
Number of extensions: 455946
Number of successful extensions: 2700
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2663
Number of HSP's gapped (non-prelim): 67
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.