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Search of human proteins with 80861463
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|80861463 proopiomelanocortin preproprotein [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505949 proopiomelanocortin preproprotein [Homo sapiens] 560 e-160
gi|80861463 proopiomelanocortin preproprotein [Homo sapiens] 560 e-160
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 38 0.008
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 38 0.008
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 38 0.008
gi|169216868 PREDICTED: similar to testis expressed sequence 13A... 37 0.014
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 36 0.031
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 36 0.040
gi|45580709 unc-93 homolog B1 [Homo sapiens] 35 0.068
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 35 0.068
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 34 0.15
gi|51317366 myosin XVIIIB [Homo sapiens] 33 0.20
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 33 0.34
gi|27886557 msh homeobox 2 [Homo sapiens] 32 0.44
gi|239747304 PREDICTED: hypothetical protein XP_002346416 [Homo ... 32 0.44
gi|210032580 SET domain containing 1B [Homo sapiens] 32 0.44
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 32 0.44
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 32 0.58
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 32 0.58
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 32 0.58
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 32 0.58
gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 32 0.76
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 32 0.76
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 32 0.76
gi|51173735 ras responsive element binding protein 1 isoform 2 [... 32 0.76
gi|51173737 ras responsive element binding protein 1 isoform 1 [... 32 0.76
gi|60460889 Myb protein P42POP [Homo sapiens] 32 0.76
gi|37537687 zinc finger protein 444 [Homo sapiens] 32 0.76
gi|157384971 cyclin G associated kinase [Homo sapiens] 31 0.99
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 31 0.99
>gi|4505949 proopiomelanocortin preproprotein [Homo sapiens]
Length = 267
Score = 560 bits (1442), Expect = e-160
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM 60
MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM
Sbjct: 1 MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM 60
Query: 61 FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG 120
FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG
Sbjct: 61 FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG 120
Query: 121 PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL 180
PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL
Sbjct: 121 PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL 180
Query: 181 TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF 240
TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF
Sbjct: 181 TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF 240
Query: 241 MTSEKSQTPLVTLFKNAIIKNAYKKGE 267
MTSEKSQTPLVTLFKNAIIKNAYKKGE
Sbjct: 241 MTSEKSQTPLVTLFKNAIIKNAYKKGE 267
>gi|80861463 proopiomelanocortin preproprotein [Homo sapiens]
Length = 267
Score = 560 bits (1442), Expect = e-160
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM 60
MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM
Sbjct: 1 MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM 60
Query: 61 FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG 120
FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG
Sbjct: 61 FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG 120
Query: 121 PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL 180
PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL
Sbjct: 121 PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL 180
Query: 181 TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF 240
TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF
Sbjct: 181 TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF 240
Query: 241 MTSEKSQTPLVTLFKNAIIKNAYKKGE 267
MTSEKSQTPLVTLFKNAIIKNAYKKGE
Sbjct: 241 MTSEKSQTPLVTLFKNAIIKNAYKKGE 267
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 38.1 bits (87), Expect = 0.008
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 83 RWDRFGRRNS--------SSSGSSGAGQKREDVSAG-EDCGPLPEGGPE--PRSDGAKPG 131
+W F N +++ ++ A E VSA P+ GP P A
Sbjct: 192 KWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPALPPPPAADIQ 251
Query: 132 PREGKRSYSMEHFRWGKPVGKKRRPVKV-YPNGAED-ESAEAFPLEFKRELTGQRLREGD 189
P +R+ + E GK G KRR P+G + + PL+ K L G + ++G
Sbjct: 252 PPPIRRAKTKE----GKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKKGG 307
Query: 190 GPDGPADDGAGAQA---DLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKR 236
+D+G +A DL+ + +A + +GP R + + G P + K+
Sbjct: 308 SYVFQSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKK 357
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 38.1 bits (87), Expect = 0.008
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 83 RWDRFGRRNS--------SSSGSSGAGQKREDVSAG-EDCGPLPEGGPE--PRSDGAKPG 131
+W F N +++ ++ A E VSA P+ GP P A
Sbjct: 192 KWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPALPPPPAADIQ 251
Query: 132 PREGKRSYSMEHFRWGKPVGKKRRPVKV-YPNGAED-ESAEAFPLEFKRELTGQRLREGD 189
P +R+ + E GK G KRR P+G + + PL+ K L G + ++G
Sbjct: 252 PPPIRRAKTKE----GKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKKGG 307
Query: 190 GPDGPADDGAGAQA---DLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKR 236
+D+G +A DL+ + +A + +GP R + + G P + K+
Sbjct: 308 SYVFQSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKK 357
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 38.1 bits (87), Expect = 0.008
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 83 RWDRFGRRNS--------SSSGSSGAGQKREDVSAG-EDCGPLPEGGPE--PRSDGAKPG 131
+W F N +++ ++ A E VSA P+ GP P A
Sbjct: 251 KWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPALPPPPAADIQ 310
Query: 132 PREGKRSYSMEHFRWGKPVGKKRRPVKV-YPNGAED-ESAEAFPLEFKRELTGQRLREGD 189
P +R+ + E GK G KRR P+G + + PL+ K L G + ++G
Sbjct: 311 PPPIRRAKTKE----GKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKKGG 366
Query: 190 GPDGPADDGAGAQA---DLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKR 236
+D+G +A DL+ + +A + +GP R + + G P + K+
Sbjct: 367 SYVFQSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKK 416
>gi|169216868 PREDICTED: similar to testis expressed sequence 13A
[Homo sapiens]
Length = 714
Score = 37.4 bits (85), Expect = 0.014
Identities = 60/251 (23%), Positives = 88/251 (35%), Gaps = 52/251 (20%)
Query: 34 CQDLTTESNLLECIRACKPDLSAETPMFPGNGD-----EQPLTENPRKYVMGHFRWDRFG 88
C D E L IR CKP+ GD ++ E P++ V+ +
Sbjct: 417 CSDRAQEMATLVFIRRCKPEGPKRPQWTVPLGDSRSHIKEEGPEGPQRIVL------QGD 470
Query: 89 RRNSSSSGSSGAGQKREDVSAGEDCGPLPEGGPE-----PRSDGAKPGPREG-------- 135
R+ S GS Q + C PE GPE P D EG
Sbjct: 471 NRSYSQEGSPERAQGMATLVFSRSC--KPEEGPERPQDTPLGDSRSHIKEEGPEGPQRIV 528
Query: 136 ----KRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKRELTGQRLREGDGP 191
RSYS E G P + V+ + E P + + ++E +GP
Sbjct: 529 LQGDNRSYSQE----GSPERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRSHIKE-EGP 583
Query: 192 DGP------------ADDGAGAQADLEHSLLVAAE-KKDEGPYRMEHFRWGSPPKDKRYG 238
+GP + +G+ +A +L+ + K +EGP R + G+P D R
Sbjct: 584 EGPQRIVLQGDNRSYSQEGSRERAQGMATLVFSRSCKPEEGPERPQ----GTPLGDSRSH 639
Query: 239 GFMTSEKSQTP 249
G S K P
Sbjct: 640 GVRESPKKWQP 650
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 36.2 bits (82), Expect = 0.031
Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 21/143 (14%)
Query: 98 SGAGQKREDVS--------AGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKP 149
S A EDVS AG GP P+GG +P+ PG +G + P
Sbjct: 14 SSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP 73
Query: 150 VGKKRRPVKVYPNGAEDESAEAFPLEFKRELTGQRLREGDGPDGPADDGAGAQADLEHSL 209
GK + P P G + S + P + +G P G G AQ +
Sbjct: 74 PGKPQGPP---PQGDKSRSPRSPPGK----------PQGPPPQGGKPQGPPAQGGSKSQS 120
Query: 210 LVAAEKKDEGPYRMEHFRWGSPP 232
+ K +GP + E PP
Sbjct: 121 ARSPPGKPQGPPQQEGNNPQGPP 143
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 35.8 bits (81), Expect = 0.040
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + P GK + P G++ +SA
Sbjct: 217 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPA--QGGSKSQSA 274
Query: 170 EAFPLEFKRELTGQRLREGDGPDGPADDGAG 200
+ P + G +EG+ P GP G
Sbjct: 275 RSPP----GKPQGPPQQEGNNPQGPPPPAGG 301
Score = 33.5 bits (75), Expect = 0.20
Identities = 42/161 (26%), Positives = 57/161 (35%), Gaps = 32/161 (19%)
Query: 98 SGAGQKREDVS--------AGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKP 149
S A EDVS AG GP P+GG +P+ PG +G + P
Sbjct: 14 SSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP 73
Query: 150 VGKKRRPVKVYPNGAEDESAEAFPLEFKRELTGQRLREGDGPDGPADDGAGAQADLEHSL 209
GK + P P G + S + P + G + G+ P GP
Sbjct: 74 PGKPQGPP---PQGDKSRSPRSPP----GKPQGPPPQGGNQPQGPPPPPG---------- 116
Query: 210 LVAAEKKDEGPYRMEHFR-WGSPPKDKRYGGFMTSEKSQTP 249
K +GP R G PP K G +KS++P
Sbjct: 117 ------KPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSP 151
Score = 32.0 bits (71), Expect = 0.58
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + + P GK + P P G + S+
Sbjct: 156 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPP---PQGDKSRSS 212
Query: 170 EAFPLEFKRELTGQRLREGDGPDGP 194
++ P + G + G+ P GP
Sbjct: 213 QSPP----GKPQGPPPQGGNQPQGP 233
>gi|45580709 unc-93 homolog B1 [Homo sapiens]
Length = 597
Score = 35.0 bits (79), Expect = 0.068
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Query: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102
L+ + A L E + G QP P+ V G+ + S + G G G
Sbjct: 501 LVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGA 560
Query: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134
+ E AG P GPEP G +P P E
Sbjct: 561 EEEAPPAG------PRPGPEPAGLGRRPCPYE 586
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 35.0 bits (79), Expect = 0.068
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + P GK + P G++ SA
Sbjct: 302 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP--QGGSKSRSA 359
Query: 170 EAFPLEFKRELTGQRLREGDGPDGPADDGAG 200
+ P + G +EG+ P GP G
Sbjct: 360 RSPP----GKPQGPPQQEGNNPQGPPPPAGG 386
Score = 30.0 bits (66), Expect = 2.2
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + P GK + P P G + S
Sbjct: 55 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP---PQGDKSRSP 111
Query: 170 EAFPLEFKRELTGQRLREGDGPDGP 194
+ P + G + G+ P GP
Sbjct: 112 RSPP----GKPQGPPPQGGNQPQGP 132
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + P GK + P P +++S
Sbjct: 178 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP----PPQGDNKSQ 233
Query: 170 EAFPLEFKRELTGQRLREGDGPDGP 194
A K + G + G+ P GP
Sbjct: 234 SARSPPGKPQ--GPPPQGGNQPQGP 256
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + P GK + P P G +
Sbjct: 240 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP---PQGGSKSRS 296
Query: 170 EAFPLEFKRELTGQRLREGDGPDGP 194
P + G + G+ P GP
Sbjct: 297 SRSP---PGKPQGPPPQGGNQPQGP 318
Score = 28.1 bits (61), Expect = 8.4
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 110 GEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESA 169
G+ GP P+GG +P+ PG +G + P GK + P P G +
Sbjct: 116 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP---PQGDNKSRS 172
Query: 170 EAFPLEFKRELTGQRLREGDGPDGP 194
P + G + G+ P GP
Sbjct: 173 SRSP---PGKPQGPPPQGGNQPQGP 194
>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
Length = 319
Score = 33.9 bits (76), Expect = 0.15
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102
L+ + A L E + G QP P+ V G+ + S + G G G+
Sbjct: 141 LVTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGE 200
Query: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134
+ E + GP P GPEP G +P P E
Sbjct: 201 EAE--AEAPPAGPRP--GPEPAGLGRRPCPYE 228
>gi|51317366 myosin XVIIIB [Homo sapiens]
Length = 2567
Score = 33.5 bits (75), Expect = 0.20
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 37/165 (22%)
Query: 101 GQKREDVSAGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVY 160
G+ +D+ GE G L RS K G K+ + G+P GK
Sbjct: 363 GELGDDLRMGEKAGEL-------RSTTGKAGESWDKKE------KMGQPQGKSG------ 403
Query: 161 PNGAEDESAEAFPLEFKRELT---------------GQRLREGDGPDGPADDGAGA-QAD 204
N E S E +E++ G R +E + P A DGAGA + +
Sbjct: 404 -NAGEARSQTEKGCEAPKEVSTMVESPAAPGKGGWPGSRGQEAEEPCSRAGDGAGALETE 462
Query: 205 LEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGFMTSEKSQTP 249
LE A EK E P + + G P+++ GG + + Q P
Sbjct: 463 LEGPSQPALEKDAERPRIRKENQDGPAPQEEGKGG-QSRDSDQAP 506
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 32.7 bits (73), Expect = 0.34
Identities = 39/153 (25%), Positives = 56/153 (36%), Gaps = 21/153 (13%)
Query: 98 SGAGQKREDVS--------AGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKP 149
S A EDVS AG GP P+GG +P+ PG +G + P
Sbjct: 14 SSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP 73
Query: 150 VGKKRRPVKVYPNGAEDESAEAFPLEFK------RELTGQRLREGDGPDGP----ADDGA 199
GK + P P G + S + P + + + G + G+ P GP G
Sbjct: 74 PGKPQGPP---PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGP 130
Query: 200 GAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPP 232
AQ + + K +GP + E PP
Sbjct: 131 PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPP 163
>gi|27886557 msh homeobox 2 [Homo sapiens]
Length = 267
Score = 32.3 bits (72), Expect = 0.44
Identities = 40/157 (25%), Positives = 59/157 (37%), Gaps = 18/157 (11%)
Query: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPN 162
K D+ + ++ GP GP P GA+ E + S F + K+ P + P
Sbjct: 6 KGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEERRVKVSSLPFSVEALMSDKKPPKEASPL 65
Query: 163 GAEDESAEAF--PLEFKRELTGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGP 220
AE SA A PL L+G RE P GP E + + + +D
Sbjct: 66 PAESASAGATLRPL----LLSGHGAREAHSP-GP------LVKPFETASVKSENSEDGAA 114
Query: 221 YRMEHFRWGSPPKDK-----RYGGFMTSEKSQTPLVT 252
+ E R+ PP+ T+ K +TP T
Sbjct: 115 WMQEPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTT 151
>gi|239747304 PREDICTED: hypothetical protein XP_002346416 [Homo
sapiens]
Length = 124
Score = 32.3 bits (72), Expect = 0.44
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 86 RFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGGPEPRSDGAKPGPREGK 136
R GRR + G+ GAG + SA CGP G + A EG+
Sbjct: 28 RSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTEGR 78
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 148 KPVGKKRRPVKVYP--NGAEDESAEAFPLEFK----RELTGQRLREGDGPDGPADDGAGA 201
K VG +RRP + +G E++ E+ E + E + E D D +DD +
Sbjct: 1015 KGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDES 1074
Query: 202 QADLEHSLLVAAEKKDEG 219
+ D E + L A +KDEG
Sbjct: 1075 ENDDEDTALSEASEKDEG 1092
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 32.3 bits (72), Expect = 0.44
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 25/109 (22%)
Query: 116 LPEGGPEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLE 175
LP+ P +DG+ PGP G + + H RPV + + D+S E E
Sbjct: 1703 LPQPKKPPLADGSGPGPEPGGKVGLLNH-----------RPVAMDAGDSADQSGERKDKE 1751
Query: 176 FKRELTGQRLREGDGPDGPAD--DGAGAQADLEHS--LLVAAEKKDEGP 220
R GP P D + +DLE + LL +D GP
Sbjct: 1752 SPRA----------GPTEPMDTSEATVCHSDLERTPPLLPGRPARDRGP 1790
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 32.0 bits (71), Expect = 0.58
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 88 GRRNSSSSGSSGAGQKRED---VSAGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHF 144
G + S SGSSG+G ++ S+G GG S G G G R S
Sbjct: 245 GGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Query: 145 RWGKPVG 151
WG G
Sbjct: 305 SWGSSTG 311
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 32.0 bits (71), Expect = 0.58
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 88 GRRNSSSSGSSGAGQKRED---VSAGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHF 144
G + S SGSSG+G ++ S+G GG S G G G R S
Sbjct: 245 GGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Query: 145 RWGKPVG 151
WG G
Sbjct: 305 SWGSSTG 311
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 32.0 bits (71), Expect = 0.58
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 88 GRRNSSSSGSSGAGQKRED---VSAGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHF 144
G + S SGSSG+G ++ S+G GG S G G G R S
Sbjct: 245 GGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Query: 145 RWGKPVG 151
WG G
Sbjct: 305 SWGSSTG 311
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 32.0 bits (71), Expect = 0.58
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 88 GRRNSSSSGSSGAGQKRED---VSAGEDCGPLPEGGPEPRSDGAKPGPREGKRSYSMEHF 144
G + S SGSSG+G ++ S+G GG S G G G R S
Sbjct: 245 GGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Query: 145 RWGKPVG 151
WG G
Sbjct: 305 SWGSSTG 311
>gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 312
Score = 31.6 bits (70), Expect = 0.76
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102
L+ + A L E + G QP P+ V G +R+ S + G G
Sbjct: 122 LVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRG-YRYLEDNSEESDAEDEHGDGA 180
Query: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134
+ E AG P GPEP G +P P E
Sbjct: 181 EEEAPPAG------PRPGPEPAGLGRRPCPYE 206
Score = 28.1 bits (61), Expect = 8.4
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 128 AKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLE-------FKREL 180
A P PR + + + +R+ + ++ + +GAE+E+ A P +R
Sbjct: 144 APPQPRIPRPQHKVRGYRYLEDNSEESDAEDEHGDGAEEEAPPAGPRPGPEPAGLGRRPC 203
Query: 181 TGQRLREGDGPD-------------GPADDGAGAQADLEHSLLVAAEKKD 217
++ + GDGP+ G AD G + H LL+ E++D
Sbjct: 204 PYEQAQRGDGPEEHLSCDAHEKQAGGGADPLQGLKVPFLHPLLLWPEERD 253
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 31.6 bits (70), Expect = 0.76
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102
L+ + A L E + G QP P+ V G +R+ S + G G
Sbjct: 122 LVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRG-YRYLEDNSEESDAEDEHGDGA 180
Query: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134
+ E AG P GPEP G +P P E
Sbjct: 181 EEEAPPAG------PRPGPEPAGLGRRPCPYE 206
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 31.6 bits (70), Expect = 0.76
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102
L+ + A L E + G QP P+ V G +R+ S + G G
Sbjct: 96 LVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRG-YRYLEDNSEESDAEDEHGDGA 154
Query: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134
+ E AG P GPEP G +P P E
Sbjct: 155 EEEAPPAG------PRPGPEPAGLGRRPCPYE 180
>gi|51173735 ras responsive element binding protein 1 isoform 2 [Homo
sapiens]
Length = 1687
Score = 31.6 bits (70), Expect = 0.76
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 162 NGAEDESA--EAFPLEFKRELTGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKD-- 217
+GAE++++ ++ L+F +L +L EGDG + GAG A E L K
Sbjct: 1349 DGAEEDASSNQSLDLDFATKLMDFKLAEGDG-----EAGAGGAASQEQKLACDTCGKSFK 1403
Query: 218 ----EGPYRMEHFRWGSPPKDKRYGGFMTSEKSQTP 249
+R H R PKD++ G T+E+ P
Sbjct: 1404 FLGTLSRHRKAHGR--QEPKDEKGDGASTAEEGPQP 1437
>gi|51173737 ras responsive element binding protein 1 isoform 1 [Homo
sapiens]
Length = 1742
Score = 31.6 bits (70), Expect = 0.76
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 162 NGAEDESA--EAFPLEFKRELTGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKD-- 217
+GAE++++ ++ L+F +L +L EGDG + GAG A E L K
Sbjct: 1404 DGAEEDASSNQSLDLDFATKLMDFKLAEGDG-----EAGAGGAASQEQKLACDTCGKSFK 1458
Query: 218 ----EGPYRMEHFRWGSPPKDKRYGGFMTSEKSQTP 249
+R H R PKD++ G T+E+ P
Sbjct: 1459 FLGTLSRHRKAHGR--QEPKDEKGDGASTAEEGPQP 1492
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 31.6 bits (70), Expect = 0.76
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 56 AETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGP 115
AE P + P + P++YV+ DR R + +S S AG + A C P
Sbjct: 133 AEEPPAAPSSQPPPPSACPQRYVLSE---DRREDRRADTSAHSKAGSSSPEPWARPSCTP 189
Query: 116 LPEGGPEPRSDGAKP 130
G P P+ + P
Sbjct: 190 QEGGCPRPKERESPP 204
>gi|37537687 zinc finger protein 444 [Homo sapiens]
Length = 327
Score = 31.6 bits (70), Expect = 0.76
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 92 SSSSGSSGAGQKREDVSAG-------EDCGPLPEGGPEPRSDGAKPGPREGKRSYSME 142
++S S A + +DV+ G ED G +P G P ++G PG + R Y E
Sbjct: 102 AASPDGSSATRVPQDVTQGPGATGGKEDSGMIPLAGTAPGAEGPAPGDSQAVRPYKQE 159
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 31.2 bits (69), Expect = 0.99
Identities = 40/137 (29%), Positives = 49/137 (35%), Gaps = 21/137 (15%)
Query: 88 GRRNSSSSGSSGAGQKREDVSAGEDCG--PLPEGGPEPRSDGAKPGPREGKRSYSMEHFR 145
G N+SS S A + D S D G P+ G EPR+D PG G +
Sbjct: 806 GAENASSKESESALMEDRDESEVSDEGGSPISSEGQEPRADPEPPGLAAGLVQQDL---- 861
Query: 146 WGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKRELTGQRLREGDGPDGP--ADDGAGAQA 203
V + P V P E P E +L G G GP P A +
Sbjct: 862 ----VFEVETPA-VLP--------EPVPQEDGVDLLGLHSEVGAGPAVPPQACKAPSSNT 908
Query: 204 DLEHSLLVAAEKKDEGP 220
DL LL E +GP
Sbjct: 909 DLLSCLLGPPEAASQGP 925
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 31.2 bits (69), Expect = 0.99
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 86 RFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGGPEPRSDGAKPGPREGKRS 138
R GR S GS G + ED +G D EG E S A G + K+S
Sbjct: 221 RKGRSASQKEGSDGDNEDDEDEGSGSDEDENDEGNDEDHSSPASEGGCKKKKS 273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,881,637
Number of Sequences: 37866
Number of extensions: 753376
Number of successful extensions: 2461
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 2343
Number of HSP's gapped (non-prelim): 190
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.