Guide to the Human Genome
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Name: EPC1 Sequence: fasta or formatted (836aa) NCBI GI: 13376810
Description:

enhancer of polycomb 1

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Tripartite Motif Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         64           4
 C cysteine            1.2         10           1
 D aspartate           5.3         44           2
 E glutamate           6.2         52           3
 F phenylalanine       2.9         24           1
 G glycine             4.1         34           2
 H histidine           2.5         21           2
 I isoleucine          4.2         35           2
 K lysine              6.6         55           3
 L leucine             8.5         71           3
 M methionine          2.4         20           1
 N asparagine          4.8         40           2
 P proline             6.0         50           1
 Q glutamine           6.8         57           4
 R arginine            6.0         50           3
 S serine             10.9         91           4
 T threonine           5.5         46           2
 V valine              5.4         45           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.8         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   enhancer of polycomb 1 
EPC2                  0.480   enhancer of polycomb homolog 2 
BRD1                  0.013   bromodomain containing protein 1 
BRPF3                 0.012   bromodomain and PHD finger containing, 3 
PHF17                 0.012   PHD finger protein 17 long isoform 
TOX3                  0.011   TOX high mobility group box family member 3 isoform...
TOX3                  0.011   TOX high mobility group box family member 3 isoform...
BRPF1                 0.010   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.010   bromodomain and PHD finger-containing protein 1 isof...
DNAJC9                0.009   DnaJ homolog, subfamily C, member 9 
MUC12                 0.009   PREDICTED: mucin 12 
LOC645202             0.009   PREDICTED: hypothetical protein LOC645202 
MN1                   0.008   meningioma  1 
PHF15                 0.008   PHD finger protein 15 
EP400                 0.008   E1A binding protein p400 
MUC4                  0.007   mucin 4 isoform a 
LOC100131514          0.007   PREDICTED: similar to hCG1747327, partial 
SPZ1                  0.007   spermatogenic leucine zipper 1 
C14orf4               0.007   chromosome 14 open reading frame 4 
LOC727832             0.007   golgi autoantigen, golgin subfamily a-like 
FOXP2                 0.007   forkhead box P2 isoform I 
FOXP2                 0.007   forkhead box P2 isoform III 
FOXP2                 0.007   forkhead box P2 isoform II 
MAML2                 0.007   mastermind-like 2 
MUC21                 0.007   mucin 21 
MUC17                 0.007   mucin 17 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
LOC100294236          0.006   PREDICTED: similar to diffuse panbronchiolitis crit...
THAP11                0.006   THAP domain containing 11 
LRRIQ1                0.006   leucine-rich repeats and IQ motif containing 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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