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Search of human proteins with 7706751
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706751 tubulin, gamma 2 [Homo sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706751 tubulin, gamma 2 [Homo sapiens] 910 0.0
gi|31543831 tubulin, gamma 1 [Homo sapiens] 894 0.0
gi|169218027 PREDICTED: similar to tubulin, gamma 1 [Homo sapiens] 308 7e-84
gi|5174735 tubulin, beta, 2 [Homo sapiens] 290 1e-78
gi|29788768 tubulin, beta 2B [Homo sapiens] 289 3e-78
gi|29788785 tubulin, beta [Homo sapiens] 289 4e-78
gi|42558279 tubulin, beta 8 [Homo sapiens] 288 5e-78
gi|4507729 tubulin, beta 2 [Homo sapiens] 288 5e-78
gi|50592996 tubulin, beta, 4 [Homo sapiens] 287 1e-77
gi|21361322 tubulin, beta 4 [Homo sapiens] 287 1e-77
gi|14210536 tubulin, beta 6 [Homo sapiens] 286 3e-77
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 282 4e-76
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 261 7e-70
gi|17921989 tubulin, alpha 4a [Homo sapiens] 236 3e-62
gi|14389309 tubulin alpha 6 [Homo sapiens] 234 1e-61
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 233 3e-61
gi|17986283 tubulin, alpha 1a [Homo sapiens] 231 8e-61
gi|156564363 tubulin, alpha 3d [Homo sapiens] 231 1e-60
gi|17921993 tubulin, alpha 3c [Homo sapiens] 231 1e-60
gi|46409270 tubulin, alpha 3e [Homo sapiens] 228 7e-60
gi|9507215 tubulin, alpha 8 [Homo sapiens] 225 7e-59
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 223 2e-58
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 170 2e-42
gi|50592998 delta-tubulin [Homo sapiens] 159 5e-39
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 112 9e-25
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 112 9e-25
gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens] 39 0.007
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens] 38 0.021
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens] 38 0.021
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens] 38 0.021
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 910 bits (2352), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHY 60
MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHY
Sbjct: 1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHY 60
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD 120
IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD
Sbjct: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD 120
Query: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSD 180
IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSD
Sbjct: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSD 180
Query: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST
Sbjct: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
Query: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP
Sbjct: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
Query: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL
Sbjct: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
Query: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDE 420
SRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDE
Sbjct: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDE 420
Query: 421 MDRSREVVQELIDEYHAATQPDYISWGTQEQ 451
MDRSREVVQELIDEYHAATQPDYISWGTQEQ
Sbjct: 421 MDRSREVVQELIDEYHAATQPDYISWGTQEQ 451
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 894 bits (2310), Expect = 0.0
Identities = 441/451 (97%), Positives = 448/451 (99%)
Query: 1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHY 60
MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHY
Sbjct: 1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHY 60
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD 120
IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD
Sbjct: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD 120
Query: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSD 180
IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFP QDEMSD
Sbjct: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSD 180
Query: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST
Sbjct: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
Query: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP
Sbjct: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
Query: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL
Sbjct: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
Query: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDE 420
SRKSPYLPSAHRVSGLMMANHTSISSLFE +C+Q+DKLRKR+AFLEQFRKEDMFKDNFDE
Sbjct: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDE 420
Query: 421 MDRSREVVQELIDEYHAATQPDYISWGTQEQ 451
MD SRE+VQ+LIDEYHAAT+PDYISWGTQEQ
Sbjct: 421 MDTSREIVQQLIDEYHAATRPDYISWGTQEQ 451
>gi|169218027 PREDICTED: similar to tubulin, gamma 1 [Homo sapiens]
Length = 158
Score = 308 bits (789), Expect = 7e-84
Identities = 149/158 (94%), Positives = 156/158 (98%)
Query: 294 MRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP 353
MRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP
Sbjct: 1 MRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP 60
Query: 354 ASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDM 413
ASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFE +C+Q+DKLRKR+AFLEQFRKEDM
Sbjct: 61 ASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDM 120
Query: 414 FKDNFDEMDRSREVVQELIDEYHAATQPDYISWGTQEQ 451
FKDNFDEMD SRE+VQ+LIDEYHAAT+PDYISWGTQEQ
Sbjct: 121 FKDNFDEMDTSREIVQQLIDEYHAATRPDYISWGTQEQ 158
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 290 bits (743), Expect = 1e-78
Identities = 150/434 (34%), Positives = 254/434 (58%), Gaps = 14/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ LQ GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RAVL+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +EA+ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P ++SD
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDAK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + + +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 298 NMMAACD---PRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P ++S + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 355 ---DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 412 ESN---MNDLVSEY 422
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 289 bits (740), Expect = 3e-78
Identities = 148/434 (34%), Positives = 254/434 (58%), Gaps = 14/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RA+L+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +E++ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P ++SD
Sbjct: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDSK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + I +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 298 NMMAACD---PRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P ++S + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 355 ---DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 412 ESN---MNDLVSEY 422
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 289 bits (739), Expect = 4e-78
Identities = 149/450 (33%), Positives = 257/450 (57%), Gaps = 11/450 (2%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q GQCGNQIG +FW+ + EHGI P G + DR V++ +A Y+P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RA+L+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +EA+ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P ++SD
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQVFDAK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + + +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 298 NMMAACD---PRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV- 353
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P +++ + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 354 --CDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEYHAATQPDYISWGTQEQ 451
+ + + +Y AT + +G + +
Sbjct: 412 ESNMNDLVSEYQQYQDATAEEEEDFGEEAE 441
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 288 bits (738), Expect = 5e-78
Identities = 151/434 (34%), Positives = 254/434 (58%), Gaps = 14/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ Q+GQCGNQIG +FW+ + EH I G + +R +V++ +A Y+P
Sbjct: 2 REIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RAVL+DLEP + S+ + P+ +++ P+N + G AGNNWA G +++G ++ E + D+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCG--AGNNWAKGHYTEGAELMESVMDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +EA+ D L+GF L HS+ GGTGSG+G+ LL ++ + YP +++ T+S+ P ++SD
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +NAD +DN AL I + L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVAELTQQMFDAK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ I +G + +V + + I+++ + F W P +++ A+
Sbjct: 298 NMMAACD---PRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVC 354
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P ++S + N+T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 355 ---DIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 412 ESN---MNDLVSEY 422
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 288 bits (738), Expect = 5e-78
Identities = 148/434 (34%), Positives = 254/434 (58%), Gaps = 14/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RA+L+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +E++ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P ++SD
Sbjct: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDSK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + I +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 298 NMMAACD---PRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P ++S + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 355 ---DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 412 ESN---MNDLVSEY 422
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 287 bits (735), Expect = 1e-77
Identities = 149/434 (34%), Positives = 251/434 (57%), Gaps = 14/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R V++ +A Y+P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RA+L+DLEP + S+ + + L+ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 62 RAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +E + D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T+SV P ++SD
Sbjct: 120 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
+LR+PG +N DL L +++P PRLHF M G+ PLT S R TV ++ +++ K
Sbjct: 239 SLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGS-QQYRALTVPELTQQMFDAK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + + +G + +V + + I+ + + F+ W P +++VA+
Sbjct: 298 NMMAACD---PRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAV- 353
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P ++S + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 354 --CDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 412 ESN---MNDLVSEY 422
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 287 bits (735), Expect = 1e-77
Identities = 148/434 (34%), Positives = 255/434 (58%), Gaps = 14/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ LQ GQCGNQIG +FW+ + EHGI P G + +R +V++ +A +Y+P
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RAVL+DLEP + S+ + P+ +++ P+N + GAGNNWA G +++G ++ + + D+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDAVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +EA+ D L+GF L HS+ GGTGSG+G+ L+ ++ + +P +++ T+SV P ++SD
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDAK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + + +G + +V + + ++ + + F+ W P +++ A+
Sbjct: 298 NMMAACD---PRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVC 354
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P +++ + N T+I LF+ +QF + +R AFL + E M + F E
Sbjct: 355 ---DIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 412 ESN---MNDLVSEY 422
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 286 bits (732), Expect = 3e-77
Identities = 148/441 (33%), Positives = 255/441 (57%), Gaps = 11/441 (2%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q GQCGNQIG +FW+ + EHGI P G + +R +V++ ++ + Y+P
Sbjct: 2 REIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RA L+DLEP + S+ + P+ +L+ P+N + G AGNNWA G +++G ++ + + D+
Sbjct: 62 RAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTG--AGNNWAKGHYTEGAELVDAVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +E + D L+GF L HS+ GGTGSG+G+ L+ ++ + +P +++ T+SV P ++SD
Sbjct: 120 VRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMP-SPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +N D +DN AL I L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
+LR+PG +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ +
Sbjct: 239 SLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDAR 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + + Y+ + + +G + +V + + I+ + + F+ W P +++VA+
Sbjct: 298 NMMAACD---PRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAV- 353
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P +++ + N T+I LF+ +QF + +R AFL F E M + F E
Sbjct: 354 --CDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEA 411
Query: 422 DRSREVVQELIDEYHAATQPD 442
+ + + +Y AT D
Sbjct: 412 ESNMNDLVSEYQQYQDATAND 432
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 282 bits (722), Expect = 4e-76
Identities = 149/435 (34%), Positives = 253/435 (58%), Gaps = 16/435 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
REI+ +Q+GQCGNQIG +FW+ + EHGI G + +R V++ +A Y+P
Sbjct: 2 REIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYVP 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGG-GAGNNWASG-FSQGEKIHEDIFD 120
RAVL+DLEP + SI +S L+ P++ HG GAGNNWA G +++G ++ E++ +
Sbjct: 62 RAVLVDLEPGTMDSIRSSKLGALFQPDSFV---HGNSGAGNNWAKGHYTEGAELIENVLE 118
Query: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSD 180
++ E++ D L+GF + HS+ GGTGSG+G+ L+ ++ + YP +++ ++SV P ++SD
Sbjct: 119 VVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMP-SPKVSD 177
Query: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
VV+PYN++L++ +L +NAD +DN AL I L + P++ +N LVS MS T
Sbjct: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
Query: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
T+LR+PG +N DL L +++P PRLHF M G+ PLT Q R +V ++ +++
Sbjct: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-QGSQQYRALSVAELTQQMFDA 296
Query: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
+N M + R Y+ + I +G++ +V + L ++ R + F+ W P +++VA+
Sbjct: 297 RNTMAACDLRRGR---YLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAV 353
Query: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDE 420
P ++ + N+T+I +F + F + KR AF+ + E M + F E
Sbjct: 354 ---CDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGE 410
Query: 421 MDRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 411 AENN---IHDLVSEY 422
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 261 bits (668), Expect = 7e-70
Identities = 147/434 (33%), Positives = 247/434 (56%), Gaps = 15/434 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
RE++ Q GQCGNQIG +FW+ + EH I G + +R +V ++A Y+
Sbjct: 2 RELVLTQTGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVHHHEASGGRYVS 61
Query: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDI 121
RAVL+DLEP + S+ + P+ +++ P+N + G AGNNWA G +++G ++ E + D+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQVFRPDNFISRQCG--AGNNWAKGRYTEGAELTESVMDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDV 181
+ +EA+ D L+GF L HS+ GGTGSG+G+ L+ ++ + YP +++ T S+ ++SD
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSIL-LLPKVSDT 178
Query: 182 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241
VV+PYN+ L++ +L +NAD +DN AL I + L + P++ +N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPK 301
L +P +N DL L +++P PRLHF M G+ PLT+ S R TV ++ +++ K
Sbjct: 239 CLCFPDQLNADLRKLAMNMVPFPRLHFFMPGFAPLTSRGS-QQYRALTVAELTQQMFDAK 297
Query: 302 NVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 361
N+M + RD + Y+ I QG + +V + + I+++ + F W P +++ A+
Sbjct: 298 NMMAA--RDPRHGR-YLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFPNNVKTAVC 354
Query: 362 RKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDEM 421
P+ ++S N+T++ L S +QF +R AFL + E M + F E
Sbjct: 355 DIPPW---GLKMSVTFTGNNTAVQELKRVS-EQFTATFRRKAFLHWYTGEGMDEMEFTEA 410
Query: 422 DRSREVVQELIDEY 435
+ + + +L+ EY
Sbjct: 411 ESN---MNDLVSEY 421
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 236 bits (602), Expect = 3e-62
Identities = 141/441 (31%), Positives = 242/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G Q+G W+ C EHGI P+G + T G D FF + +
Sbjct: 2 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP VI I N PY +L++PE + + A NN+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKED--AANNYARGHYTIGKEIIDPVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + +D L+GF++ HS GGTGSG S L+ERL+ Y KK +S++P ++S
Sbjct: 120 DRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+S I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLSVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDMAALEKDY 432
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 234 bits (597), Expect = 1e-61
Identities = 140/441 (31%), Positives = 241/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI P+G + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIIDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + AD L+GF++ HS GGTGSG S L+ERL+ Y KK +S++P ++S
Sbjct: 120 DRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+S I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + TV ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLTVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+++ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDMAALEKDY 432
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 233 bits (593), Expect = 3e-61
Identities = 140/441 (31%), Positives = 241/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI P+G + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIIDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + AD L+GF++ HS GGTGSG S L+ERL+ Y KK +S++P ++S
Sbjct: 120 DRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+S I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLSVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDMAALEKDY 432
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 231 bits (590), Expect = 8e-61
Identities = 139/441 (31%), Positives = 240/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI P+G + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIIDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + AD L+GF++ HS GGTGSG S L+ERL+ Y KK +S++P ++S
Sbjct: 120 DRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+ I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLSVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDMAALEKDY 432
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 231 bits (588), Expect = 1e-60
Identities = 137/441 (31%), Positives = 240/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI P+G + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP V+ + Y +L++PE + + A NN+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + AD L+GF++ HS GGTGSG S L+ERL+ Y KK ++++P ++S
Sbjct: 120 DRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+ I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLSVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDLAALEKDY 432
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 231 bits (588), Expect = 1e-60
Identities = 137/441 (31%), Positives = 240/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI P+G + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP V+ + Y +L++PE + + A NN+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + AD L+GF++ HS GGTGSG S L+ERL+ Y KK ++++P ++S
Sbjct: 120 DRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+ I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLSVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDLAALEKDY 432
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 228 bits (582), Expect = 7e-60
Identities = 132/426 (30%), Positives = 233/426 (54%), Gaps = 15/426 (3%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI P+G + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV +DLEP V+ + Y +L++PE + + A +N+A G ++ G++I + +
Sbjct: 62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AASNYARGHYTIGKEIVDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + AD L+GF++ HS GGTGSG S L+ERL+ Y KK ++++P ++S
Sbjct: 120 DRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+ I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK-AYHEQLSVAEITNACFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P N MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PANQMVKCD---PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGME 414
Query: 415 KDNFDE 420
+ F E
Sbjct: 415 EGEFSE 420
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 225 bits (573), Expect = 7e-59
Identities = 133/441 (30%), Positives = 240/441 (54%), Gaps = 18/441 (4%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKD--VFFYQADDEHY 60
RE I++ +GQ G QIG W+ C EHGI +G + A++ D FF + + +
Sbjct: 2 RECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGKH 61
Query: 61 IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119
+PRAV++DLEP V+ + Y +L++PE + + A NN+A G ++ G++ + +
Sbjct: 62 VPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKED--AANNYARGHYTVGKESIDLVL 119
Query: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMS 179
D I + D L+GF++ HS GGTGSG S L+ERL+ Y KK ++++P ++S
Sbjct: 120 DRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYP-APQVS 178
Query: 180 DVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239
VV+PYNS+LT +++DC ++DN A+ I L I+ P+++ +N+L+S I+S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299
T +LR+ G +N DL +L+P PR+HF + Y P+ + + A + +V ++ +
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEK-AYHEQLSVAEITSSCFE 297
Query: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359
P + MV + Y+A + +G+V P V+ ++ I+ ++ F+ W P +V
Sbjct: 298 PNSQMVKCD---PRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVG 354
Query: 360 LSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMF 414
++ + P + ++ + M++N T+I+ + +FD + + AF+ + E M
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 415 KDNFDEMDRSREVVQELIDEY 435
+ F E +RE + L +Y
Sbjct: 415 EGEFSE---AREDLAALEKDY 432
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 223 bits (569), Expect = 2e-58
Identities = 145/454 (31%), Positives = 236/454 (51%), Gaps = 27/454 (5%)
Query: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIV--------EEFATEGTDRK-DVFFY 53
RE +++ +GQ G QIG W+ C EHGI P G+V E E T+ D FF
Sbjct: 2 RECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFC 61
Query: 54 QADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGE 112
+ ++PRA+ +DLEP VI I + L++PE + + A NN+A G +S G
Sbjct: 62 ETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKED--AANNYARGRYSVGS 119
Query: 113 KIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVF 172
++ + + + + A+ L+GF++ S GGTGSG S L+ERL Y +K +SV+
Sbjct: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
Query: 173 PYQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLV 232
P +S VV+PYNS+LT T++ DC ++DN A+ I +L ++ PS + IN+LV
Sbjct: 180 P-APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLV 238
Query: 233 STIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLD 292
++S+ T +LR+ G +N DLI +L+P PR+HF MT + P+ + A + +V D
Sbjct: 239 VQVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADK-AYHEQFSVSD 297
Query: 293 VMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWG 352
+ + N +V D + Y+A + +G+V P +V+ ++ + R F+ W
Sbjct: 298 ITTACFESSNQLVKC--DPRLGK-YMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354
Query: 353 PASIQVALSRKSPY------LPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLE 406
P +V ++ + P L HR S M++N T+I + +FD + + AFL
Sbjct: 355 PTGFKVGINNRPPTVMPGGDLAKVHR-SICMLSNTTAIVEAWARLDHKFDLMYAKRAFLH 413
Query: 407 QFRKEDMFKDNFDEMDRSREVVQELIDEYHAATQ 440
+ +E M + F E +RE + L +Y Q
Sbjct: 414 WYLREGMEEAEFLE---AREDLAALERDYEEVAQ 444
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 170 bits (431), Expect = 2e-42
Identities = 133/476 (27%), Positives = 230/476 (48%), Gaps = 72/476 (15%)
Query: 6 ITLQLGQCGNQIGFEFWKQLCAEHG-ISPEGIVEEFATEGTDRKDVFFYQADDEHYI--- 61
+ +Q+GQCGNQIG FW EH ++ +GI +E + F++ D +
Sbjct: 5 VVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISS--------FFRNVDTRVVGDG 56
Query: 62 ------------PRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFS 109
RAVL+D+E V++ IL P +++ + + G+GNNWA G
Sbjct: 57 GSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDI--SGSGNNWAVGHK 114
Query: 110 QGEKIHED-IFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQT 168
+++D I + + A+ D L+ F + HS+ GGTGSGLG++LL+ L D +P+
Sbjct: 115 VFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFV 174
Query: 169 YSVFPYQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRI--------------- 213
S++P ++ DV+ PYNS+L +K L ++ADCV+ +DN +L I
Sbjct: 175 TSIYPSGED--DVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGT 232
Query: 214 ----------ATDRLHIQNPS-FSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIP 262
++ L Q+ F +N +V+ ++ T++ R+ G +N DL + +L+P
Sbjct: 233 TVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVP 292
Query: 263 TPRLHFLMTGYTPL--TTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320
P+LH+L++ TPL TD ++ R LD M K+ + R + Y+A
Sbjct: 293 FPQLHYLVSSLTPLYTLTDVNIPPRR----LDQMFSDAFSKDHQLL--RADPKHSLYLAC 346
Query: 321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMAN 380
+++G V + + ++++R++ F+ W + +L P H S L +AN
Sbjct: 347 ALMVRGNVQISDLRRNIERLKPS--LQFVSWNQEGWKTSLCSVPPV---GHSHSLLALAN 401
Query: 381 HTSISSLFESSCQQFDKLRKRDAFLEQF-RKEDMFKDNFDEMDRSREVVQELIDEY 435
+T + F ++F +L K+ A L + + E M + F E S + LI EY
Sbjct: 402 NTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSS---LSALIQEY 454
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 159 bits (402), Expect = 5e-39
Identities = 107/319 (33%), Positives = 174/319 (54%), Gaps = 18/319 (5%)
Query: 5 IITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDR--KDVFFYQADDEHYIP 62
I+T+QLGQCGNQIGFE + L ++ S +G+ E K+ FF + ++ I
Sbjct: 3 IVTVQLGQCGNQIGFEVFDALLSDSH-SSQGLCSMRENEAYQASCKERFFSEEENGVPIA 61
Query: 63 RAVLLDLEPRVIHSILNSPYAK---LYNPENIYLSEHGGGAGNNWASGFS-QGEKIHEDI 118
RAVL+D+EP+VI+ +L+ Y + + G +GNNWA G+S G + E I
Sbjct: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQG--SGNNWAYGYSVHGPRHEESI 119
Query: 119 FDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEM 178
+II +E + DS GF + S+AGGTGSGLG+++ + L D+Y L ++PY
Sbjct: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY--GT 177
Query: 179 SDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVS----T 234
+V+VQ YNS+LTL L +++D +++ +N A+++I ++I+ SFS INQ+++ +
Sbjct: 178 GEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGS 237
Query: 235 IMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKT--TVLD 292
+ + + Y N L L+ L+P P L P ++ S+A T +L
Sbjct: 238 VFQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
Query: 293 VMRRLLQPKNVMVSTGRDR 311
+R++L N + G DR
Sbjct: 298 HLRQML-ISNAKMEEGIDR 315
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 112 bits (279), Expect = 9e-25
Identities = 103/446 (23%), Positives = 179/446 (40%), Gaps = 99/446 (22%)
Query: 4 EIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPR 63
EI+ +Q G CG+QI +FW+ + H + + +EGT K Y+P
Sbjct: 3 EIVHIQTGHCGSQISAKFWEVISDGHSM-------DLPSEGTGDK-----------YVPP 44
Query: 64 AVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIID 123
+L+D EP ++ S
Sbjct: 45 TILVDPEPGIMDS----------------------------------------------- 57
Query: 124 READGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDVVV 183
+EA+ D L+GF L HS+ GTGSG+G+ L ++ + P ++ T SV P ++ V
Sbjct: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSL-KVFGTVA 116
Query: 184 QPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTL 243
+P ++ L + L +N D D A I L + ++ + VS M TT L
Sbjct: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
Query: 244 RYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNV 303
+P +N+DL L + + PRL F M + PLT+ S R T+ + +++ KN+
Sbjct: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQQVFDAKNM 235
Query: 304 MVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKL--------ANFIPWGPAS 355
M + G +H ++ + E+ L + F+ W +
Sbjct: 236 MAAP-----------------PGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTT 278
Query: 356 IQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFK 415
++ A+ LP H+++ + N + L +S QQF + A L + E M +
Sbjct: 279 VKTAM---WDILPHGHKMAVTFVGNSAATQKLSMAS-QQFPAVLCGKAVLHWYAGEGMNE 334
Query: 416 DNFDEMDRSREVVQELIDEYHAATQP 441
F E + + + + I E+ + P
Sbjct: 335 MEFAEAENN---MNDFISEHRQSRTP 357
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 112 bits (279), Expect = 9e-25
Identities = 103/446 (23%), Positives = 179/446 (40%), Gaps = 99/446 (22%)
Query: 4 EIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPR 63
EI+ +Q G CG+QI +FW+ + H + + +EGT K Y+P
Sbjct: 3 EIVHIQTGHCGSQISAKFWEVISDGHSM-------DLPSEGTGDK-----------YVPP 44
Query: 64 AVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIID 123
+L+D EP ++ S
Sbjct: 45 TILVDPEPGIMDS----------------------------------------------- 57
Query: 124 READGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDVVV 183
+EA+ D L+GF L HS+ GTGSG+G+ L ++ + P ++ T SV P ++ V
Sbjct: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSL-KVFGTVA 116
Query: 184 QPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTL 243
+P ++ L + L +N D D A I L + ++ + VS M TT L
Sbjct: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
Query: 244 RYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNV 303
+P +N+DL L + + PRL F M + PLT+ S R T+ + +++ KN+
Sbjct: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQQVFDAKNM 235
Query: 304 MVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKL--------ANFIPWGPAS 355
M + G +H ++ + E+ L + F+ W +
Sbjct: 236 MAAP-----------------PGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTT 278
Query: 356 IQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFK 415
++ A+ LP H+++ + N + L +S QQF + A L + E M +
Sbjct: 279 VKTAM---WDILPHGHKMAVTFVGNSAATQKLSMAS-QQFPAVLCGKAVLHWYAGEGMNE 334
Query: 416 DNFDEMDRSREVVQELIDEYHAATQP 441
F E + + + + I E+ + P
Sbjct: 335 MEFAEAENN---MNDFISEHRQSRTP 357
>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
Length = 198
Score = 39.3 bits (90), Expect = 0.007
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 236 MSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMR 295
M TT L +P +N+DL L + + PRL F M + PLT+ S R T+ + +
Sbjct: 1 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQ 59
Query: 296 RLLQPKNVMVS 306
++ KN+M +
Sbjct: 60 QVFDAKNMMAA 70
>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 37.7 bits (86), Expect = 0.021
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFI 349
V + +++ KN++ + + CY+ I+ G + +V + I+ + + F
Sbjct: 178 VSKLTKQMFDAKNMLAACD---PCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFA 234
Query: 350 PWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSC--QQFDKLRKRDAFLEQ 407
W P +++ A P ++S ++N+T+I LF C +QF + AFL
Sbjct: 235 HWIPHNVERA---ACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSW 291
Query: 408 FRKEDMFKDNFDEMDRSREVVQELIDEY 435
+ + M F E++ + + L+ EY
Sbjct: 292 YSGKGMHDVEFAEVESN---MNNLVSEY 316
>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 37.7 bits (86), Expect = 0.021
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFI 349
V + +++ KN++ + + CY+ I+ G + +V + I+ + + F
Sbjct: 178 VSKLTKQMFDAKNMLAACD---PCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFA 234
Query: 350 PWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSC--QQFDKLRKRDAFLEQ 407
W P +++ A P ++S ++N+T+I LF C +QF + AFL
Sbjct: 235 HWIPHNVERA---ACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSW 291
Query: 408 FRKEDMFKDNFDEMDRSREVVQELIDEY 435
+ + M F E++ + + L+ EY
Sbjct: 292 YSGKGMHDVEFAEVESN---MNNLVSEY 316
>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 37.7 bits (86), Expect = 0.021
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFI 349
V + +++ KN++ + + CY+ I+ G + +V + I+ + + F
Sbjct: 178 VSKLTKQMFDAKNMLAACD---PCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFA 234
Query: 350 PWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSC--QQFDKLRKRDAFLEQ 407
W P +++ A P ++S ++N+T+I LF C +QF + AFL
Sbjct: 235 HWIPHNVERA---ACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSW 291
Query: 408 FRKEDMFKDNFDEMDRSREVVQELIDEY 435
+ + M F E++ + + L+ EY
Sbjct: 292 YSGKGMHDVEFAEVESN---MNNLVSEY 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,872,429
Number of Sequences: 37866
Number of extensions: 743310
Number of successful extensions: 1945
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1811
Number of HSP's gapped (non-prelim): 56
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.