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Search of human proteins with 7706743
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706743 TP53 target 3 [Homo sapiens]
(124 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153791741 hypothetical protein LOC729355 [Homo sapiens] 265 5e-72
gi|7706743 TP53 target 3 [Homo sapiens] 265 5e-72
gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo... 259 5e-70
gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo... 258 1e-69
gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo... 174 2e-44
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 35 0.019
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 34 0.033
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 32 0.12
gi|169161777 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|169161622 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|169162826 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens] 30 0.36
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens] 30 0.36
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens] 30 0.36
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens] 30 0.47
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens] 30 0.47
gi|237512940 early growth response 4 [Homo sapiens] 30 0.47
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens] 30 0.47
gi|169178932 PREDICTED: hypothetical protein [Homo sapiens] 30 0.62
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens] 30 0.62
gi|169176343 PREDICTED: hypothetical protein [Homo sapiens] 30 0.62
gi|157738639 tensin 4 [Homo sapiens] 30 0.62
gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens] 29 0.81
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens] 29 0.81
gi|221139926 NHS-like 1 [Homo sapiens] 29 0.81
gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens] 29 0.81
gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens] 29 0.81
gi|239744589 PREDICTED: mucin 19 [Homo sapiens] 29 0.81
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 29 0.81
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot... 29 0.81
>gi|153791741 hypothetical protein LOC729355 [Homo sapiens]
Length = 124
Score = 265 bits (678), Expect = 5e-72
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 SFSG 124
SFSG
Sbjct: 121 SFSG 124
>gi|7706743 TP53 target 3 [Homo sapiens]
Length = 124
Score = 265 bits (678), Expect = 5e-72
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 SFSG 124
SFSG
Sbjct: 121 SFSG 124
>gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo
sapiens]
Length = 167
Score = 259 bits (661), Expect = 5e-70
Identities = 121/123 (98%), Positives = 121/123 (98%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 SFS 123
S
Sbjct: 121 RLS 123
>gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo
sapiens]
Length = 132
Score = 258 bits (658), Expect = 1e-69
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
>gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo
sapiens]
Length = 102
Score = 174 bits (441), Expect = 2e-44
Identities = 81/88 (92%), Positives = 84/88 (95%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
CFQISPAEETLELGRLVSPG + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 34.7 bits (78), Expect = 0.019
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 5 PCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ- 63
P + P + P P+ L + P + P +E CP+ SP + P +EP C Q
Sbjct: 793 PVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEHSL--CPSSPSPPLPPATQEPTCLQP 850
Query: 64 ISPA 67
SPA
Sbjct: 851 CSPA 854
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 33.9 bits (76), Expect = 0.033
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ 63
+P +A P SA TAG+ P TR P SA P CGE+ C +
Sbjct: 1343 TPSNGPSSAHTGPPSSAWPTTAGTSPRTRLP----TASASLPPV-------CGEK-CLW- 1389
Query: 64 ISPAEETLELGRLVSPGNCDTL-SPRAAGFYACHVRSLIPCRS 105
SP + GR G+ DTL + RA G+ C + CR+
Sbjct: 1390 -SPWMDVSRPGRGTDSGDFDTLENLRAHGYRVCESPRSVECRA 1431
Score = 28.1 bits (61), Expect = 1.8
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGR 75
P P + T+ S T TPGT S P P+ S C +E C + E ++ G
Sbjct: 1540 PSPPPVPATSTSSMSTTTPGTSVVSSK--PTLTEPSTSSCLQELCTW-----TEWID-GS 1591
Query: 76 LVSP----GNCDTL-SPRAAGFYACHVRSLIPCRS 105
+P G+ DT + R G+ C + CR+
Sbjct: 1592 YPAPGINGGDFDTFQNLRDEGYTFCESPRSVQCRA 1626
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 32.0 bits (71), Expect = 0.12
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 28 GPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSP 87
GP G+ PCP R P +SPC P P+ + L + P + T+
Sbjct: 913 GPPGHPAGSAWTPDPPCPQLRPPCLSPCASRP-----PPSLQDTTLAEVHCPASVGTMET 967
Query: 88 RAA 90
A
Sbjct: 968 GTA 970
>gi|169161777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 30.8 bits (68), Expect = 0.28
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
SP +S S + A PT D+ PG + G+A P ++ V
Sbjct: 83 SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
Q +P + +ELG V G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173
>gi|169161622 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 30.8 bits (68), Expect = 0.28
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
SP +S S + A PT D+ PG + G+A P ++ V
Sbjct: 83 SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
Q +P + +ELG V G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173
>gi|169162826 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 30.8 bits (68), Expect = 0.28
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
SP +S S + A PT D+ PG + G+A P ++ V
Sbjct: 83 SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
Q +P + +ELG V G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173
>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
Length = 554
Score = 30.4 bits (67), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 474 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 527
>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
Length = 501
Score = 30.4 bits (67), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 421 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 474
>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
Length = 509
Score = 30.4 bits (67), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 429 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 482
>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 30.0 bits (66), Expect = 0.47
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
P + P +LRP A SG PG V GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169
>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 30.0 bits (66), Expect = 0.47
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
P + P +LRP A SG PG V GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169
>gi|237512940 early growth response 4 [Homo sapiens]
Length = 589
Score = 30.0 bits (66), Expect = 0.47
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 7 ISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGE 57
+ +P ++ R +A R G R P + G P P R+P CGE
Sbjct: 25 LGEPGSALERRGAAARGRCGRARAPRLPDSFPRGECPKPGARAPRSVRCGE 75
>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
Length = 1024
Score = 30.0 bits (66), Expect = 0.47
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFR---SPAVSP 54
S PA+ + S LR AG GP R G V +APC R SP V+P
Sbjct: 34 SPPASMYGSTGSLLRRVAGPGPRGRELGRV---TAPCTPLRGPPSPRVAP 80
>gi|169178932 PREDICTED: hypothetical protein [Homo sapiens]
Length = 62
Score = 29.6 bits (65), Expect = 0.62
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
MR SP S P PR G GP+ R PG G P PA S + C E
Sbjct: 1 MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48
>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
Length = 127
Score = 29.6 bits (65), Expect = 0.62
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
PRPS L + GS PD + P +AP P
Sbjct: 92 PRPSDLNSSTGSSPDLQLPDPQTPTAAPAP 121
>gi|169176343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 62
Score = 29.6 bits (65), Expect = 0.62
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
MR SP S P PR G GP+ R PG G P PA S + C E
Sbjct: 1 MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48
>gi|157738639 tensin 4 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 0.62
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
Query: 23 PTAGSGPDTRTPG---TVEDGSA----PCPAFRS 49
P GS P RTPG +V+ G+A PCPA RS
Sbjct: 381 PEPGSSPPQRTPGHQNSVQPGAASPSNPCPATRS 414
>gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]
Length = 860
Score = 29.3 bits (64), Expect = 0.81
Identities = 22/89 (24%), Positives = 29/89 (32%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPA 67
S+P + PT S PD T + P F P+ S SP
Sbjct: 369 SRPRGGTSQSDISTLPTVPSSPDLEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPT 428
Query: 68 EETLELGRLVSPGNCDTLSPRAAGFYACH 96
E L SP + S A+G + H
Sbjct: 429 ESPHSTPLLSSPDSEQRQSVEASGHHTHH 457
>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
Length = 880
Score = 29.3 bits (64), Expect = 0.81
Identities = 22/89 (24%), Positives = 29/89 (32%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPA 67
S+P + PT S PD T + P F P+ S SP
Sbjct: 369 SRPRGGTSQSDISTLPTVPSSPDLEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPT 428
Query: 68 EETLELGRLVSPGNCDTLSPRAAGFYACH 96
E L SP + S A+G + H
Sbjct: 429 ESPHSTPLLSSPDSEQRQSVEASGHHTHH 457
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 29.3 bits (64), Expect = 0.81
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 21 LRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISP 66
L P GS P P V PCPA RSP + P C Q SP
Sbjct: 920 LDPAVGS-PPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSP 964
>gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]
Length = 598
Score = 29.3 bits (64), Expect = 0.81
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 24 TAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET----LELGRLVSP 79
T GSG +T T G V + +F + A S E P +P E + G V+P
Sbjct: 114 TTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERP-----NPGSEIGTTGIVSGTTVAP 168
Query: 80 GNCDTLSPRAAG 91
G+ +T + + G
Sbjct: 169 GSSNTEATTSLG 180
>gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]
Length = 598
Score = 29.3 bits (64), Expect = 0.81
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 24 TAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET----LELGRLVSP 79
T GSG +T T G V + +F + A S E P +P E + G V+P
Sbjct: 114 TTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERP-----NPGSEIGTTGIVSGTTVAP 168
Query: 80 GNCDTLSPRAAG 91
G+ +T + + G
Sbjct: 169 GSSNTEATTSLG 180
>gi|239744589 PREDICTED: mucin 19 [Homo sapiens]
Length = 598
Score = 29.3 bits (64), Expect = 0.81
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 24 TAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET----LELGRLVSP 79
T GSG +T T G V + +F + A S E P +P E + G V+P
Sbjct: 114 TTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERP-----NPGSEIGTTGIVSGTTVAP 168
Query: 80 GNCDTLSPRAAG 91
G+ +T + + G
Sbjct: 169 GSSNTEATTSLG 180
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 29.3 bits (64), Expect = 0.81
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAF-RSPAVSPCGEEPCCFQISP 66
SQP ++ A T G ++ T + GS F R+P S GEEP F P
Sbjct: 2360 SQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEEPTTFHSRP 2419
Query: 67 A 67
A
Sbjct: 2420 A 2420
Score = 27.3 bits (59), Expect = 3.1
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAF-RSPAVSPCGEEPCCFQISP 66
SQP ++ A T G ++ T + GS F RS S GEEP F P
Sbjct: 2834 SQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRP 2893
Query: 67 A 67
A
Sbjct: 2894 A 2894
>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif, 7
preproprotein [Homo sapiens]
Length = 1686
Score = 29.3 bits (64), Expect = 0.81
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 21/101 (20%)
Query: 3 ASPCISQPAASWHPRP-SALRPTAGSGPDTRTPGTVEDGSA---------PCPAFRSPAV 52
A C +P A+WH S + G G R V+ P PA + PA
Sbjct: 1455 ARRCHLRPCATWHSGNWSKCSRSCGGGSSVRDVQCVDTRDLRPLRPFHCQPGPA-KPPAH 1513
Query: 53 SPCGEEPC----------CFQISPAEETLELGRLVSPGNCD 83
PCG +PC C + E L PG C+
Sbjct: 1514 RPCGAQPCLSWYTSSWRECSEACGGGEQQRLVTCPEPGLCE 1554
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,344,955
Number of Sequences: 37866
Number of extensions: 370757
Number of successful extensions: 1793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 1662
Number of HSP's gapped (non-prelim): 238
length of query: 124
length of database: 18,247,518
effective HSP length: 89
effective length of query: 35
effective length of database: 14,877,444
effective search space: 520710540
effective search space used: 520710540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.