Search of human proteins with 7706529

Search of human proteins with 7706529

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7706529 CD244 natural killer cell receptor 2B4 [Homo
sapiens]
         (365 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]      736   0.0  
gi|4506969 signaling lymphocytic activation molecule family memb...    75   1e-13
gi|4502687 CD84 molecule [Homo sapiens]                                73   4e-13
gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]              62   8e-10
gi|19923572 SLAM family member 7 [Homo sapiens]                        58   2e-08
gi|9910342 SLAM family member 8 [Homo sapiens]                         58   2e-08
gi|16418407 activating NK receptor precursor [Homo sapiens]            54   3e-07
gi|21361571 CD48 molecule [Homo sapiens]                               53   4e-07
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]             50   2e-06
gi|68161541 carcinoembryonic antigen-related cell adhesion molec...    50   2e-06
gi|19923195 carcinoembryonic antigen-related cell adhesion molec...    50   2e-06
gi|52317156 carcinoembryonic antigen-related cell adhesion molec...    49   5e-06
gi|40255013 carcinoembryonic antigen-related cell adhesion molec...    49   9e-06
gi|110349719 titin isoform N2-A [Homo sapiens]                         48   2e-05
gi|148612793 carcinoembryonic antigen-related cell adhesion mole...    47   3e-05
gi|98986445 carcinoembryonic antigen-related cell adhesion molec...    46   6e-05
gi|21314600 carcinoembryonic antigen-related cell adhesion molec...    43   5e-04
gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]           42   9e-04
gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]           42   9e-04
gi|5901930 carcinoembryonic antigen-related cell adhesion molecu...    41   0.001
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]            39   0.006
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]             39   0.006
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]             39   0.006
gi|118572606 hemicentin 1 [Homo sapiens]                               37   0.021
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]          37   0.021
gi|237858679 neurofascin isoform 3 precursor [Homo sapiens]            37   0.028
gi|237858677 neurofascin isoform 2 precursor [Homo sapiens]            37   0.028
gi|89903008 neurofascin isoform 4 precursor [Homo sapiens]             37   0.028
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]             37   0.028
gi|237858682 neurofascin isoform 6 precursor [Homo sapiens]            37   0.028

>gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]
          Length = 365

 Score =  736 bits (1901), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQ 60
           MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQ
Sbjct: 1   MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQ 60

Query: 61  NGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT 120
           NGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT
Sbjct: 61  NGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT 120

Query: 121 FQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYL 180
           FQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYL
Sbjct: 121 FQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYL 180

Query: 181 DEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTL 240
           DEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTL
Sbjct: 181 DEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTL 240

Query: 241 ACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSS 300
           ACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSS
Sbjct: 241 ACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSS 300

Query: 301 APTSQEPAYTLYSLIQPSRKSGSRKRNHSPSFNSTIYEVIGKSQPKAQNPARLSRKELEN 360
           APTSQEPAYTLYSLIQPSRKSGSRKRNHSPSFNSTIYEVIGKSQPKAQNPARLSRKELEN
Sbjct: 301 APTSQEPAYTLYSLIQPSRKSGSRKRNHSPSFNSTIYEVIGKSQPKAQNPARLSRKELEN 360

Query: 361 FDVYS 365
           FDVYS
Sbjct: 361 FDVYS 365


>gi|4506969 signaling lymphocytic activation molecule family member
           1 [Homo sapiens]
          Length = 335

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 25/279 (8%)

Query: 42  NSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQD 101
           NS++ K+ S+      PS+ G            P     DR+ F ++NL+L I+ ++++D
Sbjct: 72  NSVENKIVSLD-----PSEAG------------PPRYLGDRYKFYLENLTLGIRESRKED 114

Query: 102 SGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVS 161
            G Y + +   +  VQ    Q+ ++++V  P ++   K  + G C + L C V +  +V+
Sbjct: 115 EGWYLMTLEK-NVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTLILGCTVEKGDHVA 173

Query: 162 YAWYR--GSKLIQTAGNLTYLDEEV-DINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQ 218
           Y+W    G+  +  A +   L   +   +  + Y C VSNP+S  S T +    C+    
Sbjct: 174 YSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPS 233

Query: 219 EFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNH 278
           E + W     ++    + L  +    + RR +      T  K+ LTIY  V+  K     
Sbjct: 234 ETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKKSLTIYAQVQ--KPGPLQ 291

Query: 279 EQEQTFPGGG--STIYSMIQSQSSAPTSQEPAYTLYSLI 315
           ++  +FP     +TIY            +  + T+Y+ +
Sbjct: 292 KKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASV 330


>gi|4502687 CD84 molecule [Homo sapiens]
          Length = 328

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 58/355 (16%)

Query: 9   ILLLLLKVYQGKGCQGSADHVVSISGV-------PLQLQPNSIQTKVDSIAWKKLLPSQN 61
           ILLL L+ +      G    + +++G+       P+ +Q      +V  IAW     S+ 
Sbjct: 8   ILLLCLQTWPEAA--GKDSEIFTVNGILGESVTFPVNIQE---PRQVKIIAWT----SKT 58

Query: 62  GFHHILKWENGSLPSNTSN-----DRFSFIVKNLSLLIKAAQQQDSGLYCLEV-TSISGK 115
              ++   ++ + P  T       +R   +  N +L+I   + +D+G Y  ++ T     
Sbjct: 59  SVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPY 118

Query: 116 VQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDG-NVSYAWYRGSKLIQTA 174
             T  + + ++ ++ KP++           C V L+C V ++  NV+Y W      +   
Sbjct: 119 TTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNW----SPLGEE 174

Query: 175 GNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFR---------FWPF 225
           GN+  + +  + +   TYTC   NPVS  S +++  Q C +    FR            F
Sbjct: 175 GNVLQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMF 233

Query: 226 LVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFP 285
            ++++ILS++FL  L          K +Q   S K   TIY  +  + +R     E    
Sbjct: 234 FLLVLILSSVFLFRLF---------KRRQDAASKK---TIYTYI--MASRNTQPAE---- 275

Query: 286 GGGSTIYSMIQSQSSAPTSQEPAYTLYSLIQPSRKSGSRKRNHSPSFNSTIYEVI 340
              S IY  I      P+ +EP  T+YS +Q + K G      S    ++ YE++
Sbjct: 276 ---SRIYDEILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIV 327


>gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
          Length = 655

 Score = 62.0 bits (149), Expect = 8e-10
 Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 88  KNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATF-QVFVFDKVEKPRLQGQGKILDRGRC 146
           ++ SL I   + +D+G Y   V S +  V + T   + ++ ++ KP++    +  + G C
Sbjct: 318 QDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGIC 377

Query: 147 QVALSCLVSRDGN-VSYAWYRGSKLIQTAGNLTYLDEEVDINGTH-TYTCNVSNPVSWES 204
           +++L+C V   GN V Y W    K    +   ++L+     +  H   TC  SNPVS  S
Sbjct: 378 RISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSS 437

Query: 205 HTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRK 249
           H       C    +  + W  L ++V L  L +G  + +C+W+RK
Sbjct: 438 HQFLSENICSGPERNTKLWIGLFLMVCL--LCVGIFS-WCIWKRK 479


>gi|19923572 SLAM family member 7 [Homo sapiens]
          Length = 335

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 70/331 (21%), Positives = 133/331 (40%), Gaps = 30/331 (9%)

Query: 1   MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWK-KLLPS 59
           M G    L L+ +L    G    G    +V   G  +     S   +VDSI W     P 
Sbjct: 1   MAGSPTCLTLIYILWQLTGSAASGPVKELVGSVGGAVTFPLKSKVKQVDSIVWTFNTTPL 60

Query: 60  QNGFHHILKWENGSL--PSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSIS-GKV 116
                  ++ E G++    N + +R  F     SL +   ++ DSG+Y + + S S  + 
Sbjct: 61  VT-----IQPEGGTIIVTQNRNRERVDFPDGGYSLKLSKLKKNDSGIYYVGIYSSSLQQP 115

Query: 117 QTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSR-DGNVSYAWYRGSKLIQTAG 175
            T  + + V++ + KP++    +    G C   L+C +   + +V Y W    K +  A 
Sbjct: 116 STQEYVLHVYEHLSKPKVTMGLQSNKNGTCVTNLTCCMEHGEEDVIYTW----KALGQAA 171

Query: 176 NLTYLDEEVDIN-----GTHTYTCNVSNPVSWE-SHTLNLTQDCQNAHQEFRFWPFLVII 229
           N ++    + I+        T+ C   NPVS   S  +   + C+ A  +      L+ +
Sbjct: 172 NESHNGSILPISWRWGESDMTFICVARNPVSRNFSSPILARKLCEGAADDPDSSMVLLCL 231

Query: 230 VILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGGS 289
           +++  L    +    +W  KR+ ++     K+ + I  +  ++              G +
Sbjct: 232 LLVPLLLSLFVLGLFLWFLKRERQEEYIEEKKRVDICRETPNICPH----------SGEN 281

Query: 290 TIYSMIQSQSSAPTSQEPAYTLYSLIQPSRK 320
           T Y  I   +     ++PA T+YS ++  +K
Sbjct: 282 TEYDTIPHTNRTILKEDPANTVYSTVEIPKK 312


>gi|9910342 SLAM family member 8 [Homo sapiens]
          Length = 285

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)

Query: 47  KVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRF---SFIVKNLSLLIKAAQQQDSG 103
           +V    W+ L PS+     +  +  GSL +   + RF   + +  NLSL +   +  DSG
Sbjct: 44  QVREAIWRSLWPSEE---LLATFFRGSLET-LYHSRFLGRAQLHSNLSLELGPLESGDSG 99

Query: 104 LYCLEVTSISGKVQTATFQVFVFDKVEKPRLQ----GQGKILDRGRCQVALSCLVSRDGN 159
            + + +    G+  T T Q+ V+D V +P +Q     +        CQV LSC       
Sbjct: 100 NFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISE 159

Query: 160 VSYAWYRGSKL--------IQTAGNLTYL-----DEEVDINGTHTYTCNVSNPVSWESHT 206
           ++Y+W R + +        + T G +  +     D +V       Y+C VSNPVSW+  T
Sbjct: 160 ITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV------AYSCIVSNPVSWDLAT 213

Query: 207 LNLTQDCQN--AHQEFRFWPFLVIIV------ILSALFLGTLACFCVWRRKRKEKQSETS 258
           +     C +  A  +  +   L+++V      +L  LF     C C  ++K+        
Sbjct: 214 VTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVG 273

Query: 259 PKEFLTIYEDV 269
           P+    + +D+
Sbjct: 274 PETENPLVQDL 284


>gi|16418407 activating NK receptor precursor [Homo sapiens]
          Length = 331

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 59/284 (20%), Positives = 121/284 (42%), Gaps = 24/284 (8%)

Query: 47  KVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSND----RFSFIVKNLSLLIKAAQQQDS 102
           KV+ I W   L ++     I+  E  S   + +N     R +F  ++ SL +   + +D+
Sbjct: 49  KVNFITW---LFNETSLAFIVPHETKSPEIHVTNPKQGKRLNF-TQSYSLQLSNLKMEDT 104

Query: 103 GLYCLEV-TSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVS-RDGNV 160
           G Y  ++ T  S K+ + T ++    ++   ++    ++     C++ L+C V   D NV
Sbjct: 105 GSYRAQISTKTSAKLSSYTLRIL--RQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNV 162

Query: 161 SYAWYRGSKLIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEF 220
           S+ W      + +  NLT +  +  I+    YTC   N VS  S +++  + C++   ++
Sbjct: 163 SFRWEALGNTLSSQPNLT-VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQY 221

Query: 221 RFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQ 280
                ++ +V    +  G +    +  RKR++  S ++ +         +  ++ RN E 
Sbjct: 222 TDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSLSTQR--------TQGPESARNLEY 273

Query: 281 EQTFPGGGSTIYSMIQSQSSA---PTSQEPAYTLYSLIQPSRKS 321
               P   +   S+  S          +    T+YS I  S++S
Sbjct: 274 VSVSPTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKES 317


>gi|21361571 CD48 molecule [Homo sapiens]
          Length = 243

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 16/215 (7%)

Query: 6   VTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKKLLPSQNGFH 64
           + L LLLL         QG   H+  +SG  + L    S+      + W      +    
Sbjct: 10  LALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQK---- 65

Query: 65  HILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT 120
            I++W+  S  S     +F   V+    + +L I   Q++D+  Y + V   +G  Q   
Sbjct: 66  -IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK 122

Query: 121 FQVFVFDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTY 179
            ++ V D V KP ++ + KI D    C + LSC++  + +V+Y WY   +        + 
Sbjct: 123 IKLQVLDPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWYGDKRPFPKELQNSV 180

Query: 180 LDEEV-DINGTHTYTCNVSNPVSWESHTLNLTQDC 213
           L+  +   N +  YTC VSN VS ++ T+ L+  C
Sbjct: 181 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPC 215


>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
          Length = 289

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 39/216 (18%)

Query: 10  LLLLLKVYQGKGCQ-----GSADHVVSIS---GVPLQLQPNSIQTKVDSIAWKK------ 55
           LLLLL + +G   +     GS + V  +     +PL++ P+    +V++I W        
Sbjct: 7   LLLLLLLQEGSQRRLWRWCGSEEVVAVLQESISLPLEIPPDE---EVENIIWSSHKSLAT 63

Query: 56  LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGK 115
           ++P + G    +   N       S     F+  + SL I     +DSGLY  +V   + +
Sbjct: 64  VVPGKEGHPATIMVTNPHYQGQVS-----FLDPSYSLHISNLSWEDSGLYQAQVNLRTSQ 118

Query: 116 VQT-ATFQVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDG-NVSYAWYRGSKLIQT 173
           + T   + + V+  + +P++    +    G C ++L C V + G +++Y+W        +
Sbjct: 119 ISTMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWL-------S 171

Query: 174 AGNLTYLDEEVDINGTH--------TYTCNVSNPVS 201
            G+ TY   E  +  T         +YTC  +NP+S
Sbjct: 172 RGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPIS 207


>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 2 precursor [Homo sapiens]
          Length = 464

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 14/146 (9%)

Query: 75  PSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRL 134
           P+N+  +    I  N SLLI+   Q D+G Y L+V       + AT Q  V+ ++ KP +
Sbjct: 93  PANSGRET---IYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSI 149

Query: 135 QGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDIN 187
                     +  VA +C      + +Y W+  ++ +  +       GN T     V  N
Sbjct: 150 SSNNSNPVEDKDAVAFTC-EPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRN 208

Query: 188 GTHTYTCNVSNPVS---WESHTLNLT 210
            T  Y C + NPVS    +  TLN+T
Sbjct: 209 DTGPYECEIQNPVSANRSDPVTLNVT 234



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 18/169 (10%)

Query: 92  LLIKAAQQQDSGLY-CLEVTSISGKVQTATFQVFVFDK---VEKPRLQGQGKILDRGRCQ 147
           L I      +SG Y C    S++G  +T    + V +    V KP+++     +   +  
Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDS 343

Query: 148 VALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDINGTHTYTCNVSNPV 200
           V L+C  + D  +S  W+  ++ + ++       GN T     V      TY C V NP+
Sbjct: 344 VNLTCSTN-DTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPI 402

Query: 201 SW-ESHTLNLTQDCQNAHQEFRFWP-----FLVIIVILSALFLGTLACF 243
           S  +S  + L  +     QE    P      ++ +V L AL    LACF
Sbjct: 403 SKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGVVALVALIAVALACF 451



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 6/131 (4%)

Query: 71  NGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVE 130
           N SLP +    R      N +L + +  + D+G Y  E+ +     ++    + V    +
Sbjct: 182 NQSLPVSP---RLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPD 238

Query: 131 KPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEEVDINGTH 190
            P +         G   ++LSC  + +    Y+W       Q+   L      + +N + 
Sbjct: 239 TPTISPSDTYYRPG-ANLSLSCYAASNPPAQYSWLINGTFQQSTQEL--FIPNITVNNSG 295

Query: 191 TYTCNVSNPVS 201
           +YTC+ +N V+
Sbjct: 296 SYTCHANNSVT 306


>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 1 precursor [Homo sapiens]
          Length = 526

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 14/146 (9%)

Query: 75  PSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRL 134
           P+N+  +    I  N SLLI+   Q D+G Y L+V       + AT Q  V+ ++ KP +
Sbjct: 93  PANSGRET---IYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSI 149

Query: 135 QGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDIN 187
                     +  VA +C      + +Y W+  ++ +  +       GN T     V  N
Sbjct: 150 SSNNSNPVEDKDAVAFTC-EPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRN 208

Query: 188 GTHTYTCNVSNPVS---WESHTLNLT 210
            T  Y C + NPVS    +  TLN+T
Sbjct: 209 DTGPYECEIQNPVSANRSDPVTLNVT 234



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 24/242 (9%)

Query: 92  LLIKAAQQQDSGLY-CLEVTSISGKVQTATFQVFVFDK---VEKPRLQGQGKILDRGRCQ 147
           L I      +SG Y C    S++G  +T    + V +    V KP+++     +   +  
Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDS 343

Query: 148 VALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDINGTHTYTCNVSNPV 200
           V L+C  + D  +S  W+  ++ + ++       GN T     V      TY C V NP+
Sbjct: 344 VNLTCSTN-DTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPI 402

Query: 201 SW-ESHTLNLTQDCQNAHQEFRFWP-----FLVIIVILSALFLGTLACFCVWRRKRKEKQ 254
           S  +S  + L  +     QE    P      ++ +V L AL    LACF  + +  +   
Sbjct: 403 SKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGVVALVALIAVALACFLHFGKTGRASD 462

Query: 255 SETSPKEFLTIYEDVKD-LKTRRNHEQEQTFPGGGSTIYSMIQSQSSAPTSQEPAYTLYS 313
                +   ++    +D      N   E T+    ST+    Q Q + PTS  P+ T   
Sbjct: 463 QRDLTEHKPSVSNHTQDHSNDPPNKMNEVTY----STLNFEAQ-QPTQPTSASPSLTATE 517

Query: 314 LI 315
           +I
Sbjct: 518 II 519



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 6/131 (4%)

Query: 71  NGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVE 130
           N SLP +    R      N +L + +  + D+G Y  E+ +     ++    + V    +
Sbjct: 182 NQSLPVSP---RLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPD 238

Query: 131 KPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEEVDINGTH 190
            P +         G   ++LSC  + +    Y+W       Q+   L      + +N + 
Sbjct: 239 TPTISPSDTYYRPG-ANLSLSCYAASNPPAQYSWLINGTFQQSTQEL--FIPNITVNNSG 295

Query: 191 TYTCNVSNPVS 201
           +YTC+ +N V+
Sbjct: 296 SYTCHANNSVT 306


>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
           isoform 2 [Homo sapiens]
          Length = 292

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 20/167 (11%)

Query: 100 QDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQG-KILDRGRCQVALSCLVSRDG 158
           +D+G Y L+VT  + +++ A+  + V++ V +P +Q     + ++G   V L+C  +  G
Sbjct: 115 EDTGYYNLQVTYRNSQIEQASHHLRVYESVAQPSIQASSTTVTEKG--SVVLTCHTNNTG 172

Query: 159 NVSYAWYRGSKLIQTAG--NLTYLDEEVDIN-----GTHTYTCNVSNPVSW-ESHTLNLT 210
             S+ W   ++ +Q      L++ +  + I+         Y C VSNPVS   S  L LT
Sbjct: 173 -TSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLT 231

Query: 211 QDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRK-RKEKQSE 256
               N          ++I V++ +L +  L CF + R+  R   QS+
Sbjct: 232 VKYDNTLG-------ILIGVLVGSLLVAALVCFLLLRKTGRASDQSD 271


>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
           6 (non-specific cross reacting antigen) [Homo sapiens]
          Length = 344

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 8/123 (6%)

Query: 86  IVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGR 145
           I  N SLLI+   Q D+G Y L+V       + AT Q  V+ ++ KP +          +
Sbjct: 101 IYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDK 160

Query: 146 CQVALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDINGTHTYTCNVSN 198
             VA +C      N +Y W+   + +  +       GN+T     V  N   +Y C + N
Sbjct: 161 DAVAFTC-EPEVQNTTYLWWVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQN 219

Query: 199 PVS 201
           P S
Sbjct: 220 PAS 222


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 69   WENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDK 128
            +++G L +++   +FSF  K  SL I + ++QD+G Y  +V +  GK  + T  V V D+
Sbjct: 5738 YKDGKLLTSSQKHKFSFYNKISSLRILSVERQDAGTYTFQVQNNVGK-SSCTAVVDVSDR 5796

Query: 129  VEKP----RLQGQGKILDRGRCQVALSCLVSRDGNVSYAWY-RGSKLIQTAGNLTYLDEE 183
               P    RL+  G +L        L C V+    +S AW+   +K++  A   T   + 
Sbjct: 5797 AVPPSFTRRLKNTGGVLG---ASCILECKVAGSSPISVAWFHEKTKIVSGAKYQTTFSDN 5853

Query: 184  V--------DINGTHTYTCNVSN 198
            V        D +    YTC  +N
Sbjct: 5854 VCTLQLNSLDSSDMGNYTCVAAN 5876



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 18/145 (12%)

Query: 68   KW-ENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
            KW ++G   S  S    +FI K  SL I  A+  D GLY  EV +  GK    T  V V 
Sbjct: 6677 KWFKDGRELSADSKHHITFINKVASLKIPCAEMSDKGLYSFEVKNSVGK-SNCTVSVHVS 6735

Query: 127  DKVEKP----RLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYR-GSKLIQTAGNLTYLD 181
            D++  P    +L+    IL      V L C VS    +S  W++ G++++      +   
Sbjct: 6736 DRIVPPSFIRKLKDVNAILG---ASVVLECRVSGSAPISVGWFQDGNEIVSGPKCQSSFS 6792

Query: 182  EEV--------DINGTHTYTCNVSN 198
            E V        + + T  YTC  +N
Sbjct: 6793 ENVCTLNLSLLEPSDTGIYTCVAAN 6817



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 9/128 (7%)

Query: 91   SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVAL 150
            +L+       DSG Y  +  +  G+V  +TF      K+     +    + +     V  
Sbjct: 8017 TLVFNQVDINDSGEYICKAENSVGEVSASTFLTVQEQKLPPSFSRQLRDVQETVGLPVVF 8076

Query: 151  SCLVSRDGNVSYAWYRGSKLIQTAGNL--TYLDEEVDINGTHT-------YTCNVSNPVS 201
             C +S    +S +WY+  K ++ + N+  ++LD    +N   T       Y+C  +NP+ 
Sbjct: 8077 DCAISGSEPISVSWYKDGKPLKDSPNVQTSFLDNTATLNIFKTDRSLAGQYSCTATNPIG 8136

Query: 202  WESHTLNL 209
              S +  L
Sbjct: 8137 SASSSARL 8144



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 14/156 (8%)

Query: 67   LKWENGSLPSNTSNDRFSFIVKNLSLLI-KAAQQQDSGLYCLEVTSISGKVQTATFQVF- 124
            + W  G      + +  ++   N++ L+       DSG Y  +  +  G   + T  VF 
Sbjct: 6110 VSWYKGDTKLRPTPEYRTYFTNNVATLVFNKVNINDSGEYTCKAENSIGTASSKT--VFR 6167

Query: 125  VFDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNL--TYLD 181
            + ++   P    Q K +++     V L+C ++    +   WYR   L++   NL  +++D
Sbjct: 6168 IQERQLPPSFARQLKDIEQTVGLPVTLTCRLNGSAPIQVCWYRDGVLLRDDENLQTSFVD 6227

Query: 182  E-------EVDINGTHTYTCNVSNPVSWESHTLNLT 210
                    + D++ +  Y+C+ SNP+   S +  LT
Sbjct: 6228 NVATLKILQTDLSHSGQYSCSASNPLGTASSSARLT 6263



 Score = 37.0 bits (84), Expect = 0.028
 Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 35/200 (17%)

Query: 34   GVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLL 93
            G PL L+     T   S+ WKK     NG +          PS   N   +   K+  L 
Sbjct: 7882 GKPLILEGTFTGTPPISVTWKK-----NGIN--------VTPSQRCN--ITTTEKSAILE 7926

Query: 94   IKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQV----A 149
            I ++  +D+G Y   + + SGK  + + Q+ +   +E P    Q   L+  +  V    +
Sbjct: 7927 IPSSTVEDAGQYNCYIENASGK-DSCSAQILI---LEPPYFVKQ---LEPVKVSVGDSAS 7979

Query: 150  LSCLVSRDGNVSYAWYRGSKLIQTAGNL---------TYLDEEVDINGTHTYTCNVSNPV 200
            L C ++    +  +WY+G   ++              T +  +VDIN +  Y C   N V
Sbjct: 7980 LQCQLAGTPEIGVSWYKGDTKLRPTTTYKMHFRNNVATLVFNQVDINDSGEYICKAENSV 8039

Query: 201  SWESHTLNLTQDCQNAHQEF 220
               S +  LT   Q     F
Sbjct: 8040 GEVSASTFLTVQEQKLPPSF 8059



 Score = 35.8 bits (81), Expect = 0.062
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 17/121 (14%)

Query: 91   SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKP----RLQGQGKILDRGRC 146
            S  I++  +QDSG Y  +V +  G      + + V D+   P    +L    K+L     
Sbjct: 5197 SFRIQSVMKQDSGQYTFKVENDFGSSSCDAY-LRVLDQNIPPSFTKKLTKMDKVLGSS-- 5253

Query: 147  QVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEE---------VDINGTHTYTCNVS 197
             + + C VS    +S  W++  K I T+     +  E         +++  T  YTC VS
Sbjct: 5254 -IHMECKVSGSLPISAQWFKDGKEISTSAKYRLVCHERSVSLEVNNLELEDTANYTCKVS 5312

Query: 198  N 198
            N
Sbjct: 5313 N 5313



 Score = 35.4 bits (80), Expect = 0.081
 Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 34/191 (17%)

Query: 26   ADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSF 85
            +DH V   G  + L+     T   S+ WKK     +GF+             T++++ + 
Sbjct: 5993 SDHSVE-PGKSIILESTYTGTLPISVTWKK-----DGFNI------------TTSEKCNI 6034

Query: 86   IV--KNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDR 143
            +   K   L I  + ++D+G Y  E+ + +G+         +   +E P    + + L+ 
Sbjct: 6035 VTTEKTCILEILNSTKRDAGQYSCEIENEAGRDVCGA----LVSTLEPPYFVTELEPLEA 6090

Query: 144  G-RCQVALSCLVSRDGNVSYAWYRG-SKLIQTAGNLTYLD--------EEVDINGTHTYT 193
                 V+L C V+    ++ +WY+G +KL  T    TY           +V+IN +  YT
Sbjct: 6091 AVGDSVSLQCQVAGTPEITVSWYKGDTKLRPTPEYRTYFTNNVATLVFNKVNINDSGEYT 6150

Query: 194  CNVSNPVSWES 204
            C   N +   S
Sbjct: 6151 CKAENSIGTAS 6161



 Score = 32.0 bits (71), Expect = 0.90
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 91    SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVAL 150
             +L +   +Q+D G+Y    T+  G+V+T++  +        P    + K        + L
Sbjct: 30589 TLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRL 30648

Query: 151   SCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESH 205
               +       +  W+ G KL+Q + N+T       I  T  YT  V   V  ++H
Sbjct: 30649 HVMYIGRPVPAMTWFHGQKLLQNSENIT-------IENTEHYTHLVMKNVQRKTH 30696



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 14/109 (12%)

Query: 78   TSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVF-------VFDKVE 130
            TSN   +F    L L ++ A   D+GLY  +V++ +G     +  V        VFD+  
Sbjct: 8293 TSNCEITFKNNTLVLQVRKAGMNDAGLYTCKVSNDAGSALCTSSIVIKEPKKPPVFDQHL 8352

Query: 131  KPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTY 179
             P    +G+        V LSC V     +   W +  + I+ +   ++
Sbjct: 8353 TPVTVSEGE-------YVQLSCHVQGSEPIRIQWLKAGREIKPSDRCSF 8394



 Score = 29.3 bits (64), Expect = 5.8
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 11/138 (7%)

Query: 82  RFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPR-LQGQGKI 140
           + SF      L I A  + +SG Y L+ T+ SG+  T+T ++ V  +   P  +Q    +
Sbjct: 55  QISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQA-TSTAELLVKAETAPPNFVQRLQSM 113

Query: 141 LDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTA--------GNL-TYLDEEVDINGTHT 191
             R   QV L   V+        +YR    IQ++        G+L + L  E     + T
Sbjct: 114 TVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGT 173

Query: 192 YTCNVSNPVSWESHTLNL 209
           Y+ N +N V   + T  L
Sbjct: 174 YSVNATNSVGRATSTAEL 191



 Score = 29.3 bits (64), Expect = 5.8
 Identities = 34/144 (23%), Positives = 53/144 (36%), Gaps = 26/144 (18%)

Query: 82   RFSFIVKNLSLLIKAAQQQDSGLY-CLEVTSISGKVQTATFQV-----FVFDKVEKPRLQ 135
            R +F+    SL I      D+G + C    S+  K  +    V     FV     K  L 
Sbjct: 4160 RIAFVEGTASLEIIRVDMNDAGNFTCRATNSVGSKDSSGALIVQEPPSFVTKPGSKDVLP 4219

Query: 136  GQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEE----------VD 185
            G           V L         ++  W++G+K + + G+  Y+ +E          V 
Sbjct: 4220 GSA---------VCLKSTFQGSTPLTIRWFKGNKELVSGGSC-YITKEALESSLELYLVK 4269

Query: 186  INGTHTYTCNVSNPVSWESHTLNL 209
             + + TYTC VSN       + NL
Sbjct: 4270 TSDSGTYTCKVSNVAGGVECSANL 4293



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 36    PLQLQPNSIQTKVDSIAWKKLLPSQNGF---HHILKWENGSLPSNTSNDRFSFIVKNLSL 92
             P  L P  I  K    A KKL    + +   H   KW+ G     TS+        + S+
Sbjct: 18900 PKILMPEQITIK----AGKKLRIEAHVYGKPHPTCKWKKGEDEVVTSSHLAVHKADSSSI 18955

Query: 93    LI-KAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVA 149
             LI K   ++DSG Y L   + SG   T   +V V D    P+       +D   C ++
Sbjct: 18956 LIIKDVTRKDSGYYSLTAENSSG-TDTQKIKVVVMDAPGPPQPPFDISDIDADACSLS 19012


>gi|148612793 carcinoembryonic antigen-related cell adhesion
           molecule isoform 1 [Homo sapiens]
          Length = 293

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 19/167 (11%)

Query: 100 QDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQG-KILDRGRCQVALSCLVSRDG 158
           +D+G Y L+VT  + +++ A+  + V++ V +P +Q     + ++G   V L+C  +  G
Sbjct: 115 EDTGYYNLQVTYRNSQIEQASHHLRVYESVAQPSIQASSTTVTEKG--SVVLTCHTNNTG 172

Query: 159 NVSYAWYRGSKLIQTAG--NLTYLDEEVDIN-----GTHTYTCNVSNPVSW-ESHTLNLT 210
             S+ W   ++ +Q      L++ +  + I+         Y C VSNPVS   S  L LT
Sbjct: 173 -TSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLT 231

Query: 211 QDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRK-RKEKQSE 256
               +          ++I V++ +L +  L CF + R+  R   QS+
Sbjct: 232 VKSDDNTLG------ILIGVLVGSLLVAALVCFLLLRKTGRASDQSD 272


>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
           5 preproprotein [Homo sapiens]
          Length = 702

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 8/123 (6%)

Query: 86  IVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGR 145
           I  N SLLI+   Q D+G Y L V       + AT Q  V+ ++ KP +          +
Sbjct: 101 IYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDK 160

Query: 146 CQVALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDINGTHTYTCNVSN 198
             VA +C      + +Y W+  ++ +  +       GN T     V  N T +Y C   N
Sbjct: 161 DAVAFTC-EPETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQN 219

Query: 199 PVS 201
           PVS
Sbjct: 220 PVS 222


>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
           8 [Homo sapiens]
          Length = 349

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 8/123 (6%)

Query: 86  IVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGR 145
           I  N SLL++   + D+G Y L+V  ++   +  T Q  V  +  KP +          +
Sbjct: 101 IYPNASLLMRNVTRNDTGSYTLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDK 160

Query: 146 CQVALSCLVSRDGNVSYAWYRGSKLIQTA-------GNLTYLDEEVDINGTHTYTCNVSN 198
             VA +C      N +Y W+   + +  +       GN T     V  N    Y C + N
Sbjct: 161 DAVAFTC-EPETQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQN 219

Query: 199 PVS 201
           P S
Sbjct: 220 PAS 222


>gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]
          Length = 450

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 14/140 (10%)

Query: 74  LPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT--FQVFVFDKVEK 131
           +P      +F+ +  N SLLI   Q  D G Y ++V        +A+   QV V D V K
Sbjct: 77  VPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVTK 136

Query: 132 PRLQ---GQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEE----- 183
           P +Q     G +   G   + L+C V     ++Y W +  + + T+   ++  +      
Sbjct: 137 PVVQIHPPSGAVEYVG--NMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHI 194

Query: 184 --VDINGTHTYTCNVSNPVS 201
             V       Y+C V NPVS
Sbjct: 195 APVTKEDIGNYSCLVRNPVS 214


>gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]
          Length = 462

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 14/140 (10%)

Query: 74  LPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT--FQVFVFDKVEK 131
           +P      +F+ +  N SLLI   Q  D G Y ++V        +A+   QV V D V K
Sbjct: 89  VPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVTK 148

Query: 132 PRLQ---GQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEE----- 183
           P +Q     G +   G   + L+C V     ++Y W +  + + T+   ++  +      
Sbjct: 149 PVVQIHPPSGAVEYVG--NMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHI 206

Query: 184 --VDINGTHTYTCNVSNPVS 201
             V       Y+C V NPVS
Sbjct: 207 APVTKEDIGNYSCLVRNPVS 226


>gi|5901930 carcinoembryonic antigen-related cell adhesion molecule
           7 [Homo sapiens]
          Length = 265

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 11/146 (7%)

Query: 62  GFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATF 121
           G+   +  EN   P++   +    I  N +LLI+     D+G Y L V   +   +  T 
Sbjct: 81  GYVKNISQENAPGPAHNGRET---IYPNGTLLIQNVTHNDAGFYTLHVIKENLVNEEVTR 137

Query: 122 QVFVFDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGS-------KLIQTA 174
           Q +VF +  KP +          +  V L+C      N +Y W+  +       +L+ + 
Sbjct: 138 QFYVFSEPPKPSITSNNFNPVENKDIVVLTCQPETQ-NTTYLWWVNNQSLLVSPRLLLST 196

Query: 175 GNLTYLDEEVDINGTHTYTCNVSNPV 200
            N T +      N    Y C + NPV
Sbjct: 197 DNRTLVLLSATKNDIGPYECEIQNPV 222


>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)

Query: 92  LLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALS 151
           L + +AQ  D+G+Y  EV       QT  F V V++ + +  +Q +    + G  ++ L 
Sbjct: 264 LELASAQLDDAGVYTAEVIRAGVSQQTHEFTVGVYEPLPQLSVQPKAPETEEGAAELRLR 323

Query: 152 CLVSRDGNVSYAWYRGSKLIQTA----GNLTYLDEEVD-------INGTHT-YTCNVSNP 199
           CL    G    +W R  + ++ A         +  E D       +   H  YTC V +P
Sbjct: 324 CLGWGPGRGELSWSRDGRALEAAESEGAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383


>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)

Query: 92  LLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALS 151
           L + +AQ  D+G+Y  EV       QT  F V V++ + +  +Q +    + G  ++ L 
Sbjct: 264 LELASAQLDDAGVYTAEVIRAGVSQQTHEFTVGVYEPLPQLSVQPKAPETEEGAAELRLR 323

Query: 152 CLVSRDGNVSYAWYRGSKLIQTA----GNLTYLDEEVD-------INGTHT-YTCNVSNP 199
           CL    G    +W R  + ++ A         +  E D       +   H  YTC V +P
Sbjct: 324 CLGWGPGRGELSWSRDGRALEAAESEGAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383


>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 867

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)

Query: 92  LLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVALS 151
           L + +AQ  D+G+Y  EV       QT  F V V++ + +  +Q +    + G  ++ L 
Sbjct: 264 LELASAQLDDAGVYTAEVIRAGVSQQTHEFTVGVYEPLPQLSVQPKAPETEEGAAELRLR 323

Query: 152 CLVSRDGNVSYAWYRGSKLIQTA----GNLTYLDEEVD-------INGTHT-YTCNVSNP 199
           CL    G    +W R  + ++ A         +  E D       +   H  YTC V +P
Sbjct: 324 CLGWGPGRGELSWSRDGRALEAAESEGAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 14/142 (9%)

Query: 67   LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
            + W     P NT+            L I     +D+G Y    T+ +G+ Q    Q    
Sbjct: 1858 ITWLKDDQPVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQ----QHIQL 1913

Query: 127  DKVEKPRLQGQGKILDRG---RCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLD-- 181
               E P L+  GK+L+        V L C  + +      WY+ ++L+  + ++T+L+  
Sbjct: 1914 HVHEPPSLEDAGKMLNETVLVSNPVQLECKAAGNPVPVITWYKDNRLLSGSTSMTFLNRG 1973

Query: 182  -----EEVDINGTHTYTCNVSN 198
                 E   I+    Y C   N
Sbjct: 1974 QIIDIESAQISDAGIYKCVAIN 1995



 Score = 33.9 bits (76), Expect = 0.24
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 14/142 (9%)

Query: 67   LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
            + W     P    +     + +   L +K A++ D G Y   V++ +GK Q    ++ ++
Sbjct: 1485 IHWFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDKGRYQCTVSNAAGK-QAKDIKLTIY 1543

Query: 127  DKVEKPRLQGQGKILDRG---RCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDE- 182
                 P ++G     D        + L C        +  WY+  + I ++    Y+D+ 
Sbjct: 1544 ---IPPSIKGGNVTTDISVLINSLIKLECETRGLPMPAITWYKDGQPIMSSSQALYIDKG 1600

Query: 183  ------EVDINGTHTYTCNVSN 198
                     ++ + TYTC+V+N
Sbjct: 1601 QYLHIPRAQVSDSATYTCHVAN 1622



 Score = 32.3 bits (72), Expect = 0.69
 Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 15/153 (9%)

Query: 67   LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
            + W     P + SN     +     L +     +D+G Y   V + +G+ +    ++F  
Sbjct: 2418 ITWFKDGWPVSLSNS-VRILSGGRMLRLMQTTMEDAGQYTCVVRNAAGEER----KIFGL 2472

Query: 127  DKVEKPRLQGQGKILD---RGRCQVALSCLVSRDGNVSYAWYRGSKLIQT-------AGN 176
              +  P + G+  + D   + +  V L+C V+ +      W++  + +Q        +G 
Sbjct: 2473 SVLVPPHIVGENTLEDVKVKEKQSVTLTCEVTGNPVPEITWHKDGQPLQEDEAHHIISGG 2532

Query: 177  LTYLDEEVDINGTHTYTCNVSNPVSWESHTLNL 209
                   V +  T  YTC  S+P   +S + +L
Sbjct: 2533 RFLQITNVQVPHTGRYTCLASSPAGHKSRSFSL 2565



 Score = 32.0 bits (71), Expect = 0.90
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 86   IVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTAT-FQVFVFDKVEKPRLQG-QGKILDR 143
            ++ + SL I   Q  D+G Y     +++G   T+T   V V      PR++  +G     
Sbjct: 4127 VLSSGSLQIAFVQPGDAGHYTCMAANVAGSSSTSTKLTVHV-----PPRIRSTEGHYTVN 4181

Query: 144  GRCQVALSCLVSRDGNVSYAWYRGSKLIQTA-GNLT------YLDEEVDINGTHTYTCNV 196
               Q  L C+       +  W + + L+    G  T       + E V +  +  YTC  
Sbjct: 4182 ENSQAILPCVADGIPTPAINWKKDNVLLANLLGKYTAEPYGELILENVVLEDSGFYTCVA 4241

Query: 197  SNPVSWESHTLNLT 210
            +N    ++HT++LT
Sbjct: 4242 NNAAGEDTHTVSLT 4255



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 17/155 (10%)

Query: 67   LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
            + W         ++ R+S I++N  L I++A   D+G Y    T+ +G   T   ++ + 
Sbjct: 3744 ITWRKDGAVLAGNHARYS-ILENGFLHIQSAHVTDTGRYLCMATNAAG---TDRRRIDLQ 3799

Query: 127  DKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQ-----------TAG 175
              V      G   +      Q  L+C  +     S  W +   L+            ++G
Sbjct: 3800 VHVPPSIAPGPTNMTVIVNVQTTLACEATGIPKPSINWRKNGHLLNVDQNQNSYRLLSSG 3859

Query: 176  NLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLT 210
            +L  +   VD   T TY C V+N    +  T++LT
Sbjct: 3860 SLVIISPSVD--DTATYECTVTNGAGDDKRTVDLT 3892



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 5/99 (5%)

Query: 81   DRFSFIVKNLSLLIKAAQQQDSGLY-CLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGK 139
            D F  ++    L+I  AQ  ++GLY C+   +     +     V V   ++   L  +  
Sbjct: 1779 DGFKILLNGRKLVIAQAQVSNTGLYRCMAANTAGDHKKEFEVTVHVPPTIKSSGLSERVV 1838

Query: 140  ILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTA-GNL 177
            +  +    VAL C+ +   N S  W +  + + TA GNL
Sbjct: 1839 VKYK---PVALQCIANGIPNPSITWLKDDQPVNTAQGNL 1874



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 17/104 (16%)

Query: 14   LKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGS 73
            L+VY      G   +V  +    ++L   S      ++ W K        H +LK    S
Sbjct: 2098 LRVYVPPNIMGEEQNVSVLISQAVELLCQSDAIPPPTLTWLK------DGHPLLKKPGLS 2151

Query: 74   LPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQ 117
            +  N S            L I+ AQ QD+G Y  E T+++GK +
Sbjct: 2152 ISENRS-----------VLKIEDAQVQDTGRYTCEATNVAGKTE 2184



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 28/187 (14%)

Query: 39   LQPNSIQTKVDSIAWKKL----LPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLI 94
            L P  ++ KV++    +     +PS +     L W     P   S+D  +      +L I
Sbjct: 2679 LSPKEVKIKVNNTLTLECEAYAIPSAS-----LSWYKDGQPLK-SDDHVNIAANGHTLQI 2732

Query: 95   KAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGR--------- 145
            K AQ  D+G Y    ++I+G+     F V +       +L   G +LD GR         
Sbjct: 2733 KEAQISDTGRYTCVASNIAGE-DELDFDVNIQVPPSFQKLWEIGNMLDTGRNGEAKDVII 2791

Query: 146  -CQVALSCLVSRDGNVSYAWYR-------GSKLIQTAGNLTYLDEEVDINGTHTYTCNVS 197
               ++L C  +     +  WY+         K++   G          +     YTC   
Sbjct: 2792 NNPISLYCETNAAPPPTLTWYKDGHPLTSSDKVLILPGGRVLQIPRAKVEDAGRYTCVAV 2851

Query: 198  NPVSWES 204
            N    +S
Sbjct: 2852 NEAGEDS 2858



 Score = 30.0 bits (66), Expect = 3.4
 Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 30/198 (15%)

Query: 10   LLLLLKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKW 69
            L   L+V+      GS + V  +   P++L+  +      S+ W K              
Sbjct: 2002 LFYSLQVHVAPSISGSNNMVAVVVNNPVRLECEARGIPAPSLTWLK-------------- 2047

Query: 70   ENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLY-CLEVTSISGKVQTATFQVFVFDK 128
             +GS  S+ SN     +     L + +AQ  D+G Y C+ V +   K +    +V+V   
Sbjct: 2048 -DGSPVSSFSNG-LQVLSGGRILALTSAQISDTGRYTCVAVNAAGEKQRDIDLRVYV--- 2102

Query: 129  VEKPRLQGQGKILDRGRCQ-VALSCLVSRDGNVSYAWYR-GSKLIQTAG-----NLTYLD 181
               P + G+ + +     Q V L C        +  W + G  L++  G     N + L 
Sbjct: 2103 --PPNIMGEEQNVSVLISQAVELLCQSDAIPPPTLTWLKDGHPLLKKPGLSISENRSVLK 2160

Query: 182  -EEVDINGTHTYTCNVSN 198
             E+  +  T  YTC  +N
Sbjct: 2161 IEDAQVQDTGRYTCEATN 2178



 Score = 29.3 bits (64), Expect = 5.8
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 66   ILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFV 125
            IL W    +P   +ND          L I +AQ+ D G Y    TS++G+ +      + 
Sbjct: 1672 ILTWLKDGVPVK-ANDNIRIEAGGKKLEIMSAQEIDRGQYICVATSVAGEKEIK----YE 1726

Query: 126  FDKVEKPRLQGQGK---ILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYL-- 180
             D +  P ++G  +    +      + L C V+     +  W +  +LI        L  
Sbjct: 1727 VDVLVPPAIEGGDETSYFIVMVNNLLELDCHVTGSPPPTIMWLKDGQLIDERDGFKILLN 1786

Query: 181  -----DEEVDINGTHTYTCNVSN 198
                   +  ++ T  Y C  +N
Sbjct: 1787 GRKLVIAQAQVSNTGLYRCMAAN 1809


>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
          Length = 416

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 33/250 (13%)

Query: 86  IVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTA--TFQVFVFDKVEKPR-LQGQGKILD 142
           + +N SLL+   Q  D G Y +E+ SI+    T   T  + V   + +P+ L     +L+
Sbjct: 101 LFENGSLLLSDLQLADEGTYEVEI-SITDDTFTGEKTINLTVDVPISRPQVLVASTTVLE 159

Query: 143 RGRCQVALSCLVSRDGNVSYAWYR-GSKLIQTAGNLTYLDEE------VDINGTHTYTCN 195
                  L+C        SY W + G  L+  +  L   D++      V +     Y+C 
Sbjct: 160 LSEA-FTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCM 218

Query: 196 VSNPVS-WESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQ 254
           V NP+S   S  + +T         +R     +I+       L TL   C   +  K KQ
Sbjct: 219 VENPISQGRSLPVKIT--------VYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKRKQ 270

Query: 255 SETSPKEFLTIYEDVKDLKTR-------RNHEQEQTFPGGGSTIYSMIQSQSSAPTSQEP 307
            +   +  L  Y D  D + +       R+ EQE+  P     +Y +++ + S  T + P
Sbjct: 271 KKLEKQNSLE-YMDQNDDRLKPEADTLPRSGEQERKNP---MALY-ILKDKDSPETEENP 325

Query: 308 AYTLYSLIQP 317
           A    S  +P
Sbjct: 326 APEPRSATEP 335


>gi|237858679 neurofascin isoform 3 precursor [Homo sapiens]
          Length = 1174

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 67  LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
           L+W      SN     +  + +N SL IK  +++D G+Y    T+I GK +    ++ V 
Sbjct: 473 LRWFKNGQGSNLDGGNYH-VYENGSLEIKMIRKEDQGIYTCVATNILGKAENQV-RLEVK 530

Query: 127 DKVEKPRLQGQGKILDRGRCQVALSCLVSRDGN--VSYAWYRGSKLIQTAGNLTYLDEEV 184
           D     R+  + ++  RG   V L C V  D +  ++ +W +  + +     +   D+ +
Sbjct: 531 DPTRIYRMP-EDQVARRG-TTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSL 588

Query: 185 DINGT-----HTYTCNVSNPVSWESHTLNLT 210
            I G       +YTC  S  +  +     LT
Sbjct: 589 TIFGVAERDQGSYTCVASTELDQDLAKAYLT 619


>gi|237858677 neurofascin isoform 2 precursor [Homo sapiens]
          Length = 1189

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 67  LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
           L+W      SN     +  + +N SL IK  +++D G+Y    T+I GK +    ++ V 
Sbjct: 473 LRWFKNGQGSNLDGGNYH-VYENGSLEIKMIRKEDQGIYTCVATNILGKAENQV-RLEVK 530

Query: 127 DKVEKPRLQGQGKILDRGRCQVALSCLVSRDGN--VSYAWYRGSKLIQTAGNLTYLDEEV 184
           D     R+  + ++  RG   V L C V  D +  ++ +W +  + +     +   D+ +
Sbjct: 531 DPTRIYRMP-EDQVARRG-TTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSL 588

Query: 185 DINGT-----HTYTCNVSNPVSWESHTLNLT 210
            I G       +YTC  S  +  +     LT
Sbjct: 589 TIFGVAERDQGSYTCVASTELDQDLAKAYLT 619


>gi|89903008 neurofascin isoform 4 precursor [Homo sapiens]
          Length = 1169

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 67  LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
           L+W      SN     +  + +N SL IK  +++D G+Y    T+I GK +    ++ V 
Sbjct: 473 LRWFKNGQGSNLDGGNYH-VYENGSLEIKMIRKEDQGIYTCVATNILGKAENQV-RLEVK 530

Query: 127 DKVEKPRLQGQGKILDRGRCQVALSCLVSRDGN--VSYAWYRGSKLIQTAGNLTYLDEEV 184
           D     R+  + ++  RG   V L C V  D +  ++ +W +  + +     +   D+ +
Sbjct: 531 DPTRIYRMP-EDQVARRG-TTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSL 588

Query: 185 DINGT-----HTYTCNVSNPVSWESHTLNLT 210
            I G       +YTC  S  +  +     LT
Sbjct: 589 TIFGVAERDQGSYTCVASTELDQDLAKAYLT 619


>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
          Length = 4391

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 70   ENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKV 129
            E GSLP    ++R        +LLI A    D+G Y    TS +G  Q A  QV V    
Sbjct: 1992 EGGSLPPQARSERTDIA----TLLIPAITTADAGFYLCVATSPAGTAQ-ARIQVVVLSAS 2046

Query: 130  EKP----RLQGQGKILDRGRCQVALSCLVSRDGNVSYAWY-RGSKL---IQTAGNLTYLD 181
            +      +++     +  G+  + L+C+V+   +    WY RG  L    Q  G+   L 
Sbjct: 2047 DASPPPVKIESSSPSVTEGQ-TLDLNCVVAGSAHAQVTWYRRGGSLPPHTQVHGSRLRL- 2104

Query: 182  EEVDINGTHTYTCNVSN 198
             +V    +  Y C V N
Sbjct: 2105 PQVSPADSGEYVCRVEN 2121



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 22/174 (12%)

Query: 36   PLQLQPNSIQT-KVDSIAWKKLLPSQNGFHHILKWEN--GSLPSNTSNDRFSFIVKNLSL 92
            P++++P+S    +  ++    ++P Q   H  + W    GSLP+               L
Sbjct: 2153 PIRIEPSSSHVAEGQTLDLNCVVPGQA--HAQVTWHKRGGSLPARHQTH-------GSLL 2203

Query: 93   LIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKP----RLQGQGKILDRGRCQV 148
             +      DSG Y   V   SG ++ +         +  P    R++     +  G+  +
Sbjct: 2204 RLHQVTPADSGEYVCHVVGTSGPLEASVLVTIEASVIPGPIPPVRIESSSSTVAEGQT-L 2262

Query: 149  ALSCLVSRDGNVSYAWY-RGSKL---IQTAGNLTYLDEEVDINGTHTYTCNVSN 198
             LSC+V+   +    WY RG  L    Q  G+  Y+ +    +    Y C  SN
Sbjct: 2263 DLSCVVAGQAHAQVTWYKRGGSLPARHQVRGSRLYIFQASPADAGQ-YVCRASN 2315



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 91   SLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFDKVEKPRLQGQGKILDRGRCQVAL 150
            +L+I    QQDSG Y    TS +G  + AT  + V        +     +  +    V L
Sbjct: 3262 TLIIPRVAQQDSGQYICNATSPAGHAE-ATIILHVESPPYATTVPEHASV--QAGETVQL 3318

Query: 151  SCLVSRDGNVSYAWYR-GSKL--IQTAGNLTYLDEEVDINGTHTYTCNVSNPV 200
             CL      +++ W R GS L    TA N     E      +  Y C V+N V
Sbjct: 3319 QCLAHGTPPLTFQWSRVGSSLPGRATARNELLHFERAAPEDSGRYRCRVTNKV 3371


>gi|237858682 neurofascin isoform 6 precursor [Homo sapiens]
          Length = 613

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 67  LKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF 126
           L+W      SN     +  + +N SL IK  +++D G+Y    T+I GK +    ++ V 
Sbjct: 456 LRWFKNGQGSNLDGGNYH-VYENGSLEIKMIRKEDQGIYTCVATNILGKAENQV-RLEVK 513

Query: 127 DKVEKPRLQGQGKILDRGRCQVALSCLVSRDGN--VSYAWYRGSKLIQTAGNLTYLDEEV 184
           D     R+  + ++  RG   V L C V  D +  ++ +W +  + +     +   D+ +
Sbjct: 514 DPTRIYRMP-EDQVARRG-TTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSL 571

Query: 185 DINGT-----HTYTCNVSNPVSWESHTLNLT 210
            I G       +YTC  S  +  +     LT
Sbjct: 572 TIFGVAERDQGSYTCVASTELDQDLAKAYLT 602


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,183,681
Number of Sequences: 37866
Number of extensions: 645065
Number of successful extensions: 2296
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 2110
Number of HSP's gapped (non-prelim): 257
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.