Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 7705915
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705915 tubulin, epsilon 1 [Homo sapiens]
(475 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 954 0.0
gi|42558279 tubulin, beta 8 [Homo sapiens] 267 2e-71
gi|29788785 tubulin, beta [Homo sapiens] 261 1e-69
gi|4507729 tubulin, beta 2 [Homo sapiens] 260 2e-69
gi|21361322 tubulin, beta 4 [Homo sapiens] 260 2e-69
gi|5174735 tubulin, beta, 2 [Homo sapiens] 260 2e-69
gi|29788768 tubulin, beta 2B [Homo sapiens] 259 4e-69
gi|14210536 tubulin, beta 6 [Homo sapiens] 257 1e-68
gi|50592996 tubulin, beta, 4 [Homo sapiens] 255 5e-68
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 245 7e-65
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 244 1e-64
gi|17921989 tubulin, alpha 4a [Homo sapiens] 235 6e-62
gi|9507215 tubulin, alpha 8 [Homo sapiens] 234 2e-61
gi|14389309 tubulin alpha 6 [Homo sapiens] 232 5e-61
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 232 6e-61
gi|17986283 tubulin, alpha 1a [Homo sapiens] 230 2e-60
gi|156564363 tubulin, alpha 3d [Homo sapiens] 230 2e-60
gi|17921993 tubulin, alpha 3c [Homo sapiens] 230 2e-60
gi|46409270 tubulin, alpha 3e [Homo sapiens] 223 4e-58
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 221 1e-57
gi|31543831 tubulin, gamma 1 [Homo sapiens] 171 1e-42
gi|7706751 tubulin, gamma 2 [Homo sapiens] 170 2e-42
gi|50592998 delta-tubulin [Homo sapiens] 134 2e-31
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 92 8e-19
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 92 8e-19
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens] 59 1e-08
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens] 59 1e-08
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens] 59 1e-08
gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo s... 32 0.96
gi|39780571 misato [Homo sapiens] 32 0.96
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 954 bits (2465), Expect = 0.0
Identities = 475/475 (100%), Positives = 475/475 (100%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS
Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
Query: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY
Sbjct: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
Query: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS
Sbjct: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
Query: 181 GEDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLV 240
GEDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLV
Sbjct: 181 GEDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLV 240
Query: 241 TSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLV 300
TSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLV
Sbjct: 241 TSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLV 300
Query: 301 SSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLR 360
SSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLR
Sbjct: 301 SSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLR 360
Query: 361 RNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLY 420
RNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLY
Sbjct: 361 RNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLY 420
Query: 421 KKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQLDATKNMPVQDLPRLSIAM 475
KKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQLDATKNMPVQDLPRLSIAM
Sbjct: 421 KKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQLDATKNMPVQDLPRLSIAM 475
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 267 bits (682), Expect = 2e-71
Identities = 161/466 (34%), Positives = 245/466 (52%), Gaps = 43/466 (9%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIY--DEAISSFFRNVDTRVVGDGGS 58
M + V+ Q+GQCGNQIG FW++ EHA ++ G Y D + NV G
Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHA-IDSAGTYHGDSHLQLERINVYYNEASGGRY 59
Query: 59 ISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGS 118
+ RAVL+D+E G ++ + GP VF I G+GNNWA GH G+
Sbjct: 60 VP---------RAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGA 110
Query: 119 LYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIY 178
+ +++ RK AE CDCLQ F + HS+GGGTGSG+GT LL + +E+P+ SI
Sbjct: 111 ELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSIL 170
Query: 179 PSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPK 237
PS + D + PYN+ L++ +L E+AD IDN++L+DI SK T+K
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSK------------TLK-- 216
Query: 238 SLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLH 297
L T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH
Sbjct: 217 -LPTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 298 YLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQIS 357
+ + PL + + ++ F + + DP+H YL A + RG + +
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMR 324
Query: 358 DLRRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKER 415
++ + + K S F W KT++C +PP G S + NNT ++ F + E+
Sbjct: 325 EVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQ 384
Query: 416 FMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 385 FTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 261 bits (666), Expect = 1e-69
Identities = 154/466 (33%), Positives = 247/466 (53%), Gaps = 43/466 (9%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + V +Q GQCGNQIG FW++ EH ++ G Y + D+ + D S+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHG-IDPTGTY---------HGDSDLQLDRISVY 50
Query: 61 KGKICSLK--ARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGS 118
+ K RA+L+D+E G ++ + GP +F + SG+GNNWA GH G+
Sbjct: 51 YNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGA 110
Query: 119 LYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIY 178
D +L+ RK AE CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+ S+
Sbjct: 111 ELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVV 170
Query: 179 PSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPK 237
PS + D + PYN+ L++ +L E+ D IDN++L+DI + T+K
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR------------TLK-- 216
Query: 238 SLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLH 297
L T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH
Sbjct: 217 -LTTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 298 YLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQIS 357
+ + PL + + ++ F + + DP+H YL A + RG + +
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324
Query: 358 DLRRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKER 415
++ + + K S FV W KT++C +PP G ++ + N+T ++ F + E+
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQ 384
Query: 416 FMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 385 FTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 260 bits (665), Expect = 2e-69
Identities = 151/464 (32%), Positives = 241/464 (51%), Gaps = 39/464 (8%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + V +Q GQCGNQIG FW++ EH ++ G Y ++ G+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHG-IDPTGSYHGDSDLQLERINVYYNEAAGN-- 57
Query: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
RA+L+D+E G ++ + GP +F + SG+GNNWA GH G+
Sbjct: 58 -----KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
D +L+ RK +E CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+ S+ PS
Sbjct: 113 VDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPS 172
Query: 181 GE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSL 239
+ D + PYN+ L++ +L E+ D IDN++L+DI + T+K L
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFR------------TLK---L 217
Query: 240 VTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYL 299
T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH+
Sbjct: 218 TTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 300 VSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDL 359
+ PL + + ++ F + + DP+H YL A + RG + + ++
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 360 RRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFM 417
+ + K S FV W KT++C +PP G S + N+T ++ F + E+F
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 418 RLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 387 AMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 260 bits (664), Expect = 2e-69
Identities = 156/466 (33%), Positives = 243/466 (52%), Gaps = 43/466 (9%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIY--DEAISSFFRNVDTRVVGDGGS 58
M + V +Q GQCGNQIG FW++ EH ++ G Y D + NV G
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHG-IDPTGTYHGDSDLQLERINVYYNEATGGNY 59
Query: 59 ISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGS 118
+ RAVL+D+E G ++ + GP +F + SG+GNNWA GH G+
Sbjct: 60 VP---------RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGA 110
Query: 119 LYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIY 178
D +L+ RK AE CDCLQ F + HS+GGGTGSG+GT L+ + +EFP+ S+
Sbjct: 111 ELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVV 170
Query: 179 PSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPK 237
PS + D + PYN+ L++ +L E+ D IDN++L+DI + T+K
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR------------TLK-- 216
Query: 238 SLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLH 297
L T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH
Sbjct: 217 -LTTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 298 YLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQIS 357
+ + PL + + ++ F + + DP+H YL A + RG + +
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324
Query: 358 DLRRNI--ERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKER 415
++ + + K S FV W KT++C +PP G + + N+T ++ F + E+
Sbjct: 325 EVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQ 384
Query: 416 FMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 385 FTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 260 bits (664), Expect = 2e-69
Identities = 154/464 (33%), Positives = 242/464 (52%), Gaps = 39/464 (8%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + V +Q GQCGNQIG FW++ EH ++ G Y ++ +
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHG-IDPTGTYHGDSDLQLERINVYY----NEAT 55
Query: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
GK RAVL+D+E G ++ + GP +F + SG+GNNWA GH G+
Sbjct: 56 GGKYVP---RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
D +L+ RK AE CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+ S+ PS
Sbjct: 113 VDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 172
Query: 181 GE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSL 239
+ D + PYN+ L++ +L E+ D IDN++L+DI + T+K L
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR------------TLK---L 217
Query: 240 VTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYL 299
T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH+
Sbjct: 218 TTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 300 VSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDL 359
+ PL + + ++ F + + DP+H YL A + RG + + ++
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326
Query: 360 RRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFM 417
+ + K S FV W KT++C +PP G S + N+T ++ F + E+F
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 418 RLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 387 AMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 259 bits (662), Expect = 4e-69
Identities = 150/464 (32%), Positives = 242/464 (52%), Gaps = 39/464 (8%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + V +Q GQCGNQIG FW++ EH + S+ + D ++ +
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGI--------DPTGSYHGDSDLQLERINVYYN 52
Query: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
+ RA+L+D+E G ++ + GP +F + SG+GNNWA GH G+
Sbjct: 53 EATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
D +L+ RK +E CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+ S+ PS
Sbjct: 113 VDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPS 172
Query: 181 GE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSL 239
+ D + PYN+ L++ +L E+ D IDN++L+DI + T+K L
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR------------TLK---L 217
Query: 240 VTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYL 299
T + G L N++V+ + +T+ RF G LN DL ++++N+VPFP+LH+
Sbjct: 218 TTPTYGDL-----------NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 300 VSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDL 359
+ PL + + ++ F + + DP+H YL A + RG + + ++
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 360 RRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFM 417
+ + K S FV W KT++C +PP G S + N+T ++ F + E+F
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 418 RLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 387 AMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 257 bits (657), Expect = 1e-68
Identities = 154/466 (33%), Positives = 241/466 (51%), Gaps = 39/466 (8%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + V +Q GQCGNQIG FW++ EH G ++ R V + S
Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLER---INVYYNESSSQ 57
Query: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
K RA L+D+E G ++ + GP +F I +G+GNNWA GH G+
Sbjct: 58 K-----YVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAEL 112
Query: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
D +L+ RK EHCDCLQ F + HS+GGGTGSG+GT L+ + +EFP+ S+ PS
Sbjct: 113 VDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPS 172
Query: 181 GE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSL 239
+ D + PYN+ L++ +L E+ D IDN++L+DI + T+K L
Sbjct: 173 PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR------------TLK---L 217
Query: 240 VTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYL 299
T + G L N++V+ + +T+S RF G LN DL ++++N+VPFP+LH+
Sbjct: 218 TTPTYGDL-----------NHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 300 VSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDL 359
+ PL + + ++ F + + DP+H YL A + RG + + ++
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEV 326
Query: 360 RRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFM 417
+ + K S FV W K ++C +PP G + + N+T ++ F + E+F
Sbjct: 327 DEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFS 386
Query: 418 RLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DATKN 462
++++KA L H+ EGM+E FTEA S+++ L+ EY Q DAT N
Sbjct: 387 AMFRRKAFL-HWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAN 431
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 255 bits (652), Expect = 5e-68
Identities = 152/470 (32%), Positives = 239/470 (50%), Gaps = 51/470 (10%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAA------VNQKGIYDEAISSFFRNVDTRVVG 54
M + V +Q GQCGNQIG FW++ EH V + E IS ++ +
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSH--- 57
Query: 55 DGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHK 114
RA+L+D+E G ++ + G +F I SG+GNNWA GH
Sbjct: 58 -----------KYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHY 106
Query: 115 VFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFV 174
G+ D +L+ RK E+CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+
Sbjct: 107 TEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNT 166
Query: 175 TSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTT 233
S+ PS + D + PYN+ L++ +L E+ D IDN++L+DI + T
Sbjct: 167 FSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR------------T 214
Query: 234 VKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPF 293
+K L T + G L N++V+ + +T+S RF G LN DL ++++N+VPF
Sbjct: 215 LK---LATPTYGDL-----------NHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPF 260
Query: 294 PQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGN 353
P+LH+ + PL + ++ F + + DP+H YL A + RG
Sbjct: 261 PRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 320
Query: 354 VQISDLRRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME 411
+ + ++ + + K S FV W K ++C +PP G S + N+T ++ F
Sbjct: 321 MSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKR 380
Query: 412 LKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
+ E+F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 381 ISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 245 bits (625), Expect = 7e-65
Identities = 150/476 (31%), Positives = 242/476 (50%), Gaps = 50/476 (10%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA---AVNQKG---IYDEAISSFFRNVDTRVVG 54
M + V +Q+GQCGNQIG FW++ EH A + +G + E IS ++ R
Sbjct: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGR--- 57
Query: 55 DGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHK 114
RAVL+D+E G ++ I L +F + SG+GNNWA GH
Sbjct: 58 -----------KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHY 106
Query: 115 VFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFV 174
G+ + +LE R +E CDCLQ F I+HS+GGGTGSG+GT L+ + +E+P+
Sbjct: 107 TEGAELIENVLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNS 166
Query: 175 TSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTT 233
S+ PS + D + PYN++L++ +L E+AD IDN++L+DI + T
Sbjct: 167 FSVMPSPKVSDTVVEPYNAVLSIHQLIENADACFCIDNEALYDICFR------------T 214
Query: 234 VKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPF 293
+K L T + G L N++V+ + +T+S RF G LN DL ++++N+VPF
Sbjct: 215 LK---LTTPTYGDL-----------NHLVSLTMSGITTSLRFPGQLNADLRKLAVNMVPF 260
Query: 294 PQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGN 353
P+LH+ + PL + ++ F + + D + YL A + RG
Sbjct: 261 PRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGK 320
Query: 354 VQISDLRRNI--ERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME 411
+ ++ + + + + S FV W K ++C +PP G S + + NNT ++ F
Sbjct: 321 MSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEIFNR 380
Query: 412 LKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQLDATKNMPVQD 467
+ E F ++K+KA +H Y EGM+ + F EA +++ L+ EY Q K + +D
Sbjct: 381 VSEHFSAMFKRKAFVHWYTS-EGMDINEFGEAENNIHDLVSEYQQFQDAKAVLEED 435
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 244 bits (623), Expect = 1e-64
Identities = 153/466 (32%), Positives = 240/466 (51%), Gaps = 44/466 (9%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIY--DEAISSFFRNVDTRVVGDGGS 58
M + V+ Q GQCGNQIG FW++ EHA ++ G Y D + NV G
Sbjct: 1 MRELVLTQTGQCGNQIGAKFWEVISDEHA-IDSAGTYHGDSHLQLERINVHHHEASGGRY 59
Query: 59 ISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGS 118
+S RAVL+D+E G ++ + GP VF I+ G+GNNWA G G+
Sbjct: 60 VS---------RAVLVDLEPGTMDSVRSGPFGQVFRPDNFISRQCGAGNNWAKGRYTEGA 110
Query: 119 LYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPE-VYRFVTSI 177
+ +++ RK AE CDCLQ F + HS+GGGTGSG+GT L+ + +E+P+ + ++ +
Sbjct: 111 ELTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSIL 170
Query: 178 YPSGEDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPK 237
D + PYN+ L++ +L E+AD IDN++L+DI S+ T+K
Sbjct: 171 LLPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSR------------TLK-- 216
Query: 238 SLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLH 297
L T + G L N++V+ + +T+ F LN DL +++MN+VPFP+LH
Sbjct: 217 -LPTPTYGDL-----------NHLVSATMSGVTTCLCFPDQLNADLRKLAMNMVPFPRLH 264
Query: 298 YLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQIS 357
+ + PL + + ++ F + + DP+H YL A + +G + +
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAARDPRHGRYLTAAAIFQGRMPMR 324
Query: 358 DLRRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKER 415
++ + + K S F W KT++C +PP G S+ NNT V+ + E+
Sbjct: 325 EVDEQMFNIQDKNSSYFADWFPNNVKTAVCDIPPWGLKMSVTFTGNNTAVQ-ELKRVSEQ 383
Query: 416 FMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
F +++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT
Sbjct: 384 FTATFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 428
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 235 bits (600), Expect = 6e-62
Identities = 141/474 (29%), Positives = 240/474 (50%), Gaps = 56/474 (11%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + + V VGQ G Q+G W+L EH GI + + + +G G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEH------GIQPDG-----QMPSDKTIGGGDDSF 49
Query: 61 KGKICSLKA-----RAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKV 115
C A RAV +D+E V++EI GP R +F +QLIT + NN+A GH
Sbjct: 50 TTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYT 109
Query: 116 FGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVT 175
G D +L++ RK ++ C LQ F + HS GGGTGSG + L++ L ++ + +
Sbjct: 110 IGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEF 169
Query: 176 SIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKLGTT 233
SIYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI---------- 219
Query: 234 VKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPF 293
+ + +N +++ ++ ++T+S RF+G+LN+DL E NLVP+
Sbjct: 220 -----------------ERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPY 262
Query: 294 PQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGN 353
P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC L+ RG+
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGD 322
Query: 354 VQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALANNT 403
V D+ I +K S+QFV W G+K + PP ++ L+N T
Sbjct: 323 VVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 382
Query: 404 CVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
+ + L +F +Y K+A +H Y+ EGMEE F+EA ++AL ++Y+++
Sbjct: 383 AIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDMAALEKDYEEV 435
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 234 bits (596), Expect = 2e-61
Identities = 143/469 (30%), Positives = 237/469 (50%), Gaps = 46/469 (9%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + + V VGQ G QIG W+L EH + G +D S N D
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHG-IQADGTFDAQASKI--NDDDSFTTFFSETG 57
Query: 61 KGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLY 120
GK RAV+ID+E VV+E+ G R +F +QLIT + NN+A GH G
Sbjct: 58 NGKHVP---RAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKES 114
Query: 121 QDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPS 180
D +L++ RK + C LQ F I HS GGGTGSG + L++ L ++ + + +IYP+
Sbjct: 115 IDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPA 174
Query: 181 GE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKLGTTVKPKS 238
+ + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 175 PQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI--------------- 219
Query: 239 LVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHY 298
+ + +N +++ ++ ++T+S RF+G+LN+DL E NLVP+P++H+
Sbjct: 220 ------------ERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267
Query: 299 LVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISD 358
+ + P+ + + ++ S F + Q+++ DP+H Y+AC ++ RG+V D
Sbjct: 268 PLVTYAPIISAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKD 327
Query: 359 LRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALANNTCVKPT 408
+ I +K ++QFV W G+K + PP ++ L+N T +
Sbjct: 328 VNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387
Query: 409 FMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
+ L +F +Y K+A +H Y+ EGMEE F+EA L+AL ++Y+++
Sbjct: 388 WARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDLAALEKDYEEV 435
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 232 bits (592), Expect = 5e-61
Identities = 141/479 (29%), Positives = 242/479 (50%), Gaps = 62/479 (12%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRV 52
M + + + VGQ G QIG W+L EH + G D++ ++FF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET---- 56
Query: 53 VGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVG 112
G G + RAV +D+E V++E+ G R +F +QLIT + NN+A G
Sbjct: 57 -GAGKHVP---------RAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 113 HKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYR 172
H G D +L++ RK A+ C LQ F + HS GGGTGSG + L++ L ++ + +
Sbjct: 107 HYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166
Query: 173 FVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKL 230
SIYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI------- 219
Query: 231 GTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNL 290
+ + +N +++ ++ ++T+S RF+G+LN+DL E NL
Sbjct: 220 --------------------ERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNL 259
Query: 291 VPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMV 350
VP+P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC L+
Sbjct: 260 VPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLY 319
Query: 351 RGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALA 400
RG+V D+ I +K ++QFV W G+K + PP ++ L+
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 401 NNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQLDA 459
N T V + L +F +Y K+A +H Y+ EGMEE F+EA ++AL ++Y+++ A
Sbjct: 380 NTTAVAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDMAALEKDYEEVGA 437
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 232 bits (591), Expect = 6e-61
Identities = 140/477 (29%), Positives = 241/477 (50%), Gaps = 62/477 (12%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRV 52
M + + + VGQ G QIG W+L EH + G D++ ++FF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET---- 56
Query: 53 VGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVG 112
G G + RAV +D+E V++E+ G R +F +QLIT + NN+A G
Sbjct: 57 -GAGKHVP---------RAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 113 HKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYR 172
H G D +L++ RK A+ C LQ F + HS GGGTGSG + L++ L ++ + +
Sbjct: 107 HYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166
Query: 173 FVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKL 230
SIYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI------- 219
Query: 231 GTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNL 290
+ + +N +++ ++ ++T+S RF+G+LN+DL E NL
Sbjct: 220 --------------------ERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNL 259
Query: 291 VPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMV 350
VP+P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC L+
Sbjct: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 319
Query: 351 RGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALA 400
RG+V D+ I +K S+QFV W G+K + PP ++ L+
Sbjct: 320 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 401 NNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
N T + + L +F +Y K+A +H Y+ EGMEE F+EA ++AL ++Y+++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDMAALEKDYEEV 435
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 230 bits (587), Expect = 2e-60
Identities = 139/477 (29%), Positives = 240/477 (50%), Gaps = 62/477 (12%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRV 52
M + + + VGQ G QIG W+L EH + G D++ ++FF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET---- 56
Query: 53 VGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVG 112
G G + RAV +D+E V++E+ G R +F +QLIT + NN+A G
Sbjct: 57 -GAGKHVP---------RAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 113 HKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYR 172
H G D +L++ RK A+ C LQ F + HS GGGTGSG + L++ L ++ + +
Sbjct: 107 HYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166
Query: 173 FVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKL 230
SIYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI------- 219
Query: 231 GTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNL 290
+ + +N ++ ++ ++T+S RF+G+LN+DL E NL
Sbjct: 220 --------------------ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
Query: 291 VPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMV 350
VP+P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC L+
Sbjct: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 319
Query: 351 RGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALA 400
RG+V D+ I +K ++QFV W G+K + PP ++ L+
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 401 NNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
N T + + L +F +Y K+A +H Y+ EGMEE F+EA ++AL ++Y+++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDMAALEKDYEEV 435
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 230 bits (586), Expect = 2e-60
Identities = 140/477 (29%), Positives = 240/477 (50%), Gaps = 62/477 (12%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRV 52
M + + + VGQ G QIG W+L EH + G D++ ++FF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET---- 56
Query: 53 VGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVG 112
G G + RAV +D+E VV+E+ G R +F +QLIT + NN+A G
Sbjct: 57 -GAGKHVP---------RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 113 HKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYR 172
H G D +L++ RK A+ C LQ F I HS GGGTGSG + L++ L ++ + +
Sbjct: 107 HYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSK 166
Query: 173 FVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKL 230
+IYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 167 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI------- 219
Query: 231 GTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNL 290
+ + +N ++ ++ ++T+S RF+G+LN+DL E NL
Sbjct: 220 --------------------ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
Query: 291 VPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMV 350
VP+P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC ++
Sbjct: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 319
Query: 351 RGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALA 400
RG+V D+ I +K ++QFV W G+K + PP ++ L+
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 401 NNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
N T + + L +F +Y K+A +H Y+ EGMEE F+EA L+AL ++Y+++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDLAALEKDYEEV 435
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 230 bits (586), Expect = 2e-60
Identities = 140/477 (29%), Positives = 240/477 (50%), Gaps = 62/477 (12%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRV 52
M + + + VGQ G QIG W+L EH + G D++ ++FF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET---- 56
Query: 53 VGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVG 112
G G + RAV +D+E VV+E+ G R +F +QLIT + NN+A G
Sbjct: 57 -GAGKHVP---------RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 113 HKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYR 172
H G D +L++ RK A+ C LQ F I HS GGGTGSG + L++ L ++ + +
Sbjct: 107 HYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSK 166
Query: 173 FVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKL 230
+IYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 167 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI------- 219
Query: 231 GTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNL 290
+ + +N ++ ++ ++T+S RF+G+LN+DL E NL
Sbjct: 220 --------------------ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
Query: 291 VPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMV 350
VP+P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC ++
Sbjct: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 319
Query: 351 RGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALA 400
RG+V D+ I +K ++QFV W G+K + PP ++ L+
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 401 NNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
N T + + L +F +Y K+A +H Y+ EGMEE F+EA L+AL ++Y+++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDLAALEKDYEEV 435
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 223 bits (567), Expect = 4e-58
Identities = 138/477 (28%), Positives = 238/477 (49%), Gaps = 62/477 (12%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRV 52
M + + + VGQ G QIG W+L EH + G D++ ++FF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET---- 56
Query: 53 VGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVG 112
G G + RAV +D+E VV+E+ G R +F +QLIT + +N+A G
Sbjct: 57 -GAGKHVP---------RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARG 106
Query: 113 HKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYR 172
H G D +L++ RK A+ C LQ F I HS GGGTGSG + L++ L ++ + +
Sbjct: 107 HYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSK 166
Query: 173 FVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKL 230
+IYP+ + + PYNSIL EH+DC +DN++++DI + +D+
Sbjct: 167 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI------- 219
Query: 231 GTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNL 290
+ + +N ++ ++ ++T+S RF+G+LN+DL E NL
Sbjct: 220 --------------------ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
Query: 291 VPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMV 350
VP+P++H+ +++ P+ + + ++ + F +Q+++ DP+H Y+AC ++
Sbjct: 260 VPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 319
Query: 351 RGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALA 400
RG+V D+ I +K ++QFV W G+K + PP ++ L+
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 401 NNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
N T + + L +F +Y K A +H Y+ EGMEE F+EA L+AL ++ +++
Sbjct: 380 NTTAIAEAWARLVHKFDLMYAKWAFVHWYVG-EGMEEGEFSEAREDLAALEKDCEEV 435
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 221 bits (563), Expect = 1e-57
Identities = 143/473 (30%), Positives = 231/473 (48%), Gaps = 47/473 (9%)
Query: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
M + + + +GQ G QIG W+L EH + G+ + N
Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHG-IQPNGVVLDTQQDQLENAKMEHTNASFDTF 59
Query: 61 KGKICSLKA-----RAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKV 115
C +A RA+ +D+E V++ I G R +F +QL++ + NN+A G
Sbjct: 60 ---FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYS 116
Query: 116 FGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVT 175
GS D +LE+ RK AE C LQ F I S GGGTGSG + L++ L E+ +
Sbjct: 117 VGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEF 176
Query: 176 SIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTV 234
S+YP+ + PYNS+L EH DC +DN++++DI + KLG
Sbjct: 177 SVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHR--------KLGVEC 228
Query: 235 KPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFP 294
+ ++N +V ++ ++T+S RFEG LN+DL E NLVP+P
Sbjct: 229 PSHA------------------SINRLVVQVVSSITASLRFEGPLNVDLIEFQTNLVPYP 270
Query: 295 QLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV 354
++H+ +++ P+ + + + + F +QL++ DP+ Y+AC L+ RG+V
Sbjct: 271 RIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDV 330
Query: 355 QISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP-------VGHSH-SLLALANNTC 404
++ I K S+QFV W G+K + + PP + H S+ L+N T
Sbjct: 331 VPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTA 390
Query: 405 VKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
+ + L +F +Y K+A LH YL+ EGMEE+ F EA L+AL ++Y+++
Sbjct: 391 IVEAWARLDHKFDLMYAKRAFLHWYLR-EGMEEAEFLEAREDLAALERDYEEV 442
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 171 bits (434), Expect = 1e-42
Identities = 134/470 (28%), Positives = 231/470 (49%), Gaps = 60/470 (12%)
Query: 5 VVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKI 64
+ +Q+GQCGNQIG FW EH ++ +GI +E + D + V + + I
Sbjct: 6 ITLQLGQCGNQIGFEFWKQLCAEHG-ISPEGIVEEFATE---GTDRKDVFFYQADDEHYI 61
Query: 65 CSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDI--SGSGNNWAVGHKVFGSLYQD 122
RAVL+D+E V++ IL P +++ + + G+GNNWA G +++D
Sbjct: 62 ----PRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHED 117
Query: 123 QILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE 182
I + + A+ D L+ F + HS+ GGTGSGLG++LL+ L D +P+ S++P+ +
Sbjct: 118 -IFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQD 176
Query: 183 D--DVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLV 240
+ DV+ PYNS+L +K L ++ADCV+ +DN +L I
Sbjct: 177 EMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRI----------------------- 213
Query: 241 TSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLV 300
++ L Q+ F +N +V+ ++ T++ R+ G +N DL + +L+P P+LH+L+
Sbjct: 214 --ATDRLHIQNPS-FSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLM 270
Query: 301 SSLTPLYT--------LTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRG 352
+ TPL T T V RRL Q + S R + Y+A +++G
Sbjct: 271 TGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTG----RDRQTNHCYIAILNIIQG 326
Query: 353 NVQISDLRRNIERLKPS--LQFVSWNQEGWKTSLCSVPPV---GHSHSLLALANNTCVKP 407
V + + ++++R++ F+ W + +L P H S L +AN+T +
Sbjct: 327 EVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISS 386
Query: 408 TFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSS---LSALIQEY 454
F ++ +L K++A L + + E M + F E +S + LI EY
Sbjct: 387 LFERTCRQYDKLRKREAFLEQF-RKEDMFKDNFDEMDTSREIVQQLIDEY 435
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 170 bits (431), Expect = 2e-42
Identities = 135/470 (28%), Positives = 229/470 (48%), Gaps = 60/470 (12%)
Query: 5 VVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKI 64
+ +Q+GQCGNQIG FW EH ++ +GI +E + D + V + + I
Sbjct: 6 ITLQLGQCGNQIGFEFWKQLCAEHG-ISPEGIVEEFATE---GTDRKDVFFYQADDEHYI 61
Query: 65 CSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDI--SGSGNNWAVGHKVFGSLYQD 122
RAVL+D+E V++ IL P +++ + + G+GNNWA G +++D
Sbjct: 62 ----PRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHED 117
Query: 123 QILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE 182
I + + A+ D L+ F + HS+ GGTGSGLG++LL+ L D +P+ S++P +
Sbjct: 118 -IFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQD 176
Query: 183 D--DVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLV 240
+ DV+ PYNS+L +K L ++ADCV+ +DN +L I
Sbjct: 177 EMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRI----------------------- 213
Query: 241 TSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLV 300
++ L Q+ F +N +V+ ++ T++ R+ G +N DL + +L+P P+LH+L+
Sbjct: 214 --ATDRLHIQNPS-FSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLM 270
Query: 301 SSLTPLYT--------LTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRG 352
+ TPL T T V RRL Q + S R + Y+A +++G
Sbjct: 271 TGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTG----RDRQTNHCYIAILNIIQG 326
Query: 353 NVQISDLRRNIERLKPS--LQFVSWNQEGWKTSLCSVPPV---GHSHSLLALANNTCVKP 407
V + + ++++R++ F+ W + +L P H S L +AN+T +
Sbjct: 327 EVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISS 386
Query: 408 TFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSS---LSALIQEY 454
F ++F +L K+ A L + + E M + F E S + LI EY
Sbjct: 387 LFESSCQQFDKLRKRDAFLEQF-RKEDMFKDNFDEMDRSREVVQELIDEY 435
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 134 bits (336), Expect = 2e-31
Identities = 129/482 (26%), Positives = 212/482 (43%), Gaps = 61/482 (12%)
Query: 5 VVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKI 64
V VQ+GQCGNQIG +D L + + + + S N + S+ +
Sbjct: 4 VTVQLGQCGNQIGFEVFDALLSDSHS-------SQGLCSMRENEAYQASCKERFFSEEEN 56
Query: 65 CSLKARAVLIDMEEGVVNEILQGPLRD---VFDTKQLITDISGSGNNWAVGHKVFGSLYQ 121
ARAVL+DME V+N++L + + GSGNNWA G+ V G ++
Sbjct: 57 GVPIARAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHE 116
Query: 122 DQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSG 181
+ I+ RK E CD FFII SM GGTGSGLG F+ + LED++ + I+P G
Sbjct: 117 ESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPYG 176
Query: 182 EDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKI---------DL-MVNSGKLG 231
+VI YNSIL + L +D +L +N ++ I +K+ D+ V + +LG
Sbjct: 177 TGEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLG 236
Query: 232 TTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLV 291
+ +P SS F N + +L+ +L F+ ++ +S N +
Sbjct: 237 SVFQPTYSAESS-----------FHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSL 285
Query: 292 PF---------PQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSL 342
+ L ++ S + D ++ P S L D +
Sbjct: 286 AYTTFTWAGLLKHLRQMLISNAKMEEGIDRHVWP-----PLSGLPPLSKMSLNKDLHFNT 340
Query: 343 YLACALMVRG-NVQISDLRRNIERLKPSLQFVSWNQ-----EGWKTSLCSVPPVGHSHSL 396
+A +++RG +VQ +D +E K + SW + WKT + S
Sbjct: 341 SIANLVILRGKDVQSAD----VEGFKDPALYTSWLKPVNAFNVWKTQRAFSK---YEKSA 393
Query: 397 LALANNT-CVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYD 455
+ ++N+ VKP M + + ++ KA++H Y + G+EE F ++ +SL ++ Y
Sbjct: 394 VLVSNSQFLVKPLDM-IVGKAWNMFASKAYIHQYTKF-GIEEEDFLDSFTSLEQVVASYC 451
Query: 456 QL 457
L
Sbjct: 452 NL 453
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 92.4 bits (228), Expect = 8e-19
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 130 KSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGED-DVITS 188
K AE CDCLQ F + HS+G GTGSG+GT L + +E P+ +S+ PS + +
Sbjct: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAE 117
Query: 189 PYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLVTSSSGALK 248
P ++ L + L E+ D D ++ ++I + L T +
Sbjct: 118 PCSAXLPIHPLVENTDETCGTDIEAPYNI---------------RFRTLELTTQN----- 157
Query: 249 KQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYT 308
++ + + V+ + +T+ F LN DL ++++N V FP+L + +++ PL +
Sbjct: 158 ------YEDLTHXVSANMRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTS 211
Query: 309 ----LTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV-----QISDL 359
L P+ Q+F D K+ + L N+ ++++
Sbjct: 212 CGSQLYRALTMPKLTQQVF-------------DAKNMMAAPPGLPSSMNIHPFMKEVNEQ 258
Query: 360 RRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRL 419
+++ S F+ W KT++ + P GH ++ + N+ + M ++F +
Sbjct: 259 MLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKLSM-ASQQFPAV 317
Query: 420 YKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQ 456
KA LH Y EGM E F EA ++++ I E+ Q
Sbjct: 318 LCGKAVLHWYAG-EGMNEMEFAEAENNMNDFISEHRQ 353
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 92.4 bits (228), Expect = 8e-19
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 130 KSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGED-DVITS 188
K AE CDCLQ F + HS+G GTGSG+GT L + +E P+ +S+ PS + +
Sbjct: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAE 117
Query: 189 PYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLVTSSSGALK 248
P ++ L + L E+ D D ++ ++I + L T +
Sbjct: 118 PCSAXLPIHPLVENTDETCGTDIEAPYNI---------------RFRTLELTTQN----- 157
Query: 249 KQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYT 308
++ + + V+ + +T+ F LN DL ++++N V FP+L + +++ PL +
Sbjct: 158 ------YEDLTHXVSANMRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTS 211
Query: 309 ----LTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV-----QISDL 359
L P+ Q+F D K+ + L N+ ++++
Sbjct: 212 CGSQLYRALTMPKLTQQVF-------------DAKNMMAAPPGLPSSMNIHPFMKEVNEQ 258
Query: 360 RRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRL 419
+++ S F+ W KT++ + P GH ++ + N+ + M ++F +
Sbjct: 259 MLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKLSM-ASQQFPAV 317
Query: 420 YKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQ 456
KA LH Y EGM E F EA ++++ I E+ Q
Sbjct: 318 LCGKAVLHWYAG-EGMNEMEFAEAENNMNDFISEHRQ 353
>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 58.9 bits (141), Expect = 1e-08
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 315 PPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV---QISDLRRNIERLKPSLQ 371
PP + ++ F + L DP H YL A +V G + ++ + NI+ K S
Sbjct: 174 PPLEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQN-KYSSY 232
Query: 372 FVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME--LKERFMRLYKKKAHLHHY 429
F W + + C +PP+ S+ ++NNT ++ F + E+F ++ KA L Y
Sbjct: 233 FAHWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWY 292
Query: 430 LQVEGMEESCFTEAVSSLSALIQEY 454
+GM + F E S+++ L+ EY
Sbjct: 293 -SGKGMHDVEFAEVESNMNNLVSEY 316
>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 58.9 bits (141), Expect = 1e-08
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 315 PPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV---QISDLRRNIERLKPSLQ 371
PP + ++ F + L DP H YL A +V G + ++ + NI+ K S
Sbjct: 174 PPLEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQN-KYSSY 232
Query: 372 FVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME--LKERFMRLYKKKAHLHHY 429
F W + + C +PP+ S+ ++NNT ++ F + E+F ++ KA L Y
Sbjct: 233 FAHWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWY 292
Query: 430 LQVEGMEESCFTEAVSSLSALIQEY 454
+GM + F E S+++ L+ EY
Sbjct: 293 -SGKGMHDVEFAEVESNMNNLVSEY 316
>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 58.9 bits (141), Expect = 1e-08
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 315 PPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV---QISDLRRNIERLKPSLQ 371
PP + ++ F + L DP H YL A +V G + ++ + NI+ K S
Sbjct: 174 PPLEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQN-KYSSY 232
Query: 372 FVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME--LKERFMRLYKKKAHLHHY 429
F W + + C +PP+ S+ ++NNT ++ F + E+F ++ KA L Y
Sbjct: 233 FAHWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWY 292
Query: 430 LQVEGMEESCFTEAVSSLSALIQEY 454
+GM + F E S+++ L+ EY
Sbjct: 293 -SGKGMHDVEFAEVESNMNNLVSEY 316
>gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo
sapiens]
Length = 421
Score = 32.3 bits (72), Expect = 0.96
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 306 LYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLRRNIER 365
+ L D N RL+Q+F A +Q++ +PK + L CA + N Q ++++
Sbjct: 118 ILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKN-QWQLSADDLKK 176
Query: 366 LKPSLQ 371
LKP L+
Sbjct: 177 LKPGLE 182
>gi|39780571 misato [Homo sapiens]
Length = 570
Score = 32.3 bits (72), Expect = 0.96
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 120 YQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPE----VYRFVT 175
YQ+++ ++ E CD LQ F I+ + G SG+G ++L+DE+ + +
Sbjct: 207 YQEELEDRLHFYVEECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLP 265
Query: 176 SIYPSGE-DDVITSPYNSILAMKELNEHADCVLPI 209
Y GE I N+ + L H+ V P+
Sbjct: 266 GPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL 300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,286,241
Number of Sequences: 37866
Number of extensions: 745647
Number of successful extensions: 1786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1620
Number of HSP's gapped (non-prelim): 53
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.