Guide to the Human Genome
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Name: TSSK6 Sequence: fasta or formatted (273aa) NCBI GI: 14042966
Description:

testis-specific serine kinase 6

Referenced in:

Additional Serine / Threonine Protein Kinases
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         22           3
 C cysteine            2.2          6           1
 D aspartate           5.9         16           2
 E glutamate           4.8         13           1
 F phenylalanine       3.3          9           1
 G glycine             8.8         24           1
 H histidine           2.9          8           2
 I isoleucine          4.0         11           1
 K lysine              5.9         16           2
 L leucine            10.6         29           2
 M methionine          1.8          5           1
 N asparagine          1.8          5           1
 P proline             5.5         15           2
 Q glutamine           2.9          8           1
 R arginine            8.1         22           3
 S serine              6.2         17           1
 T threonine           2.9          8           2
 V valine              9.2         25           2
 W tryptophan          0.7          2           1
 Y tyrosine            4.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis-specific serine kinase 6 
TSSK3                 0.411   testis-specific serine kinase 3 
TSSK1B                0.408   testis-specific serine kinase 1 
TSSK2                 0.406   testis-specific serine kinase 2 
TSSK4                 0.330   testis-specific serine kinase 4 
MARK4                 0.291   MAP/microtubule affinity-regulating kinase 4 
SIK1                  0.287   SNF1-like kinase 
MARK1                 0.283   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.277   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.277   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.277   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.277   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK2                 0.275   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.275   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.275   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.275   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.275   MAP/microtubule affinity-regulating kinase 2 isoform...
QSK                   0.268   serine/threonine-protein kinase QSK 
SIK2                  0.253   SNF1-like kinase 2 
NUAK2                 0.242   NUAK family, SNF1-like kinase, 2 
NUAK1                 0.242   AMPK-related protein kinase 5 
PRKAA2                0.242   AMP-activated protein kinase alpha 2 catalytic subun...
HUNK                  0.242   hormonally upregulated Neu-associated kinase 
BRSK1                 0.240   BR serine/threonine kinase 1 
BRSK2                 0.236   BR serine/threonine kinase 2 
SNRK                  0.234   SNF related kinase 
SNRK                  0.234   SNF related kinase 
PRKAA1                0.230   protein kinase, AMP-activated, alpha 1 catalytic sub...
MGC42105              0.228   serine/threonine-protein kinase NIM1 
MELK                  0.228   maternal embryonic leucine zipper kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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