Guide to the Human Genome
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Name: TSSK1B Sequence: fasta or formatted (367aa) NCBI GI: 14042947
Description:

testis-specific serine kinase 1

Referenced in:

Additional Serine / Threonine Protein Kinases
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         23           2
 C cysteine            2.2          8           1
 D aspartate           6.0         22           2
 E glutamate           7.9         29           2
 F phenylalanine       3.0         11           1
 G glycine             5.7         21           1
 H histidine           3.0         11           1
 I isoleucine          6.5         24           2
 K lysine              8.7         32           2
 L leucine             9.8         36           3
 M methionine          3.3         12           1
 N asparagine          2.5          9           1
 P proline             6.5         24           2
 Q glutamine           4.1         15           2
 R arginine            5.4         20           2
 S serine              7.4         27           2
 T threonine           3.5         13           1
 V valine              4.1         15           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis-specific serine kinase 1 
TSSK2                 0.632   testis-specific serine kinase 2 
TSSK3                 0.317   testis-specific serine kinase 3 
TSSK6                 0.299   testis-specific serine kinase 6 
TSSK4                 0.276   testis-specific serine kinase 4 
SIK1                  0.249   SNF1-like kinase 
QSK                   0.241   serine/threonine-protein kinase QSK 
SIK2                  0.238   SNF1-like kinase 2 
MARK2                 0.230   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.230   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.230   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.230   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.230   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK1                 0.230   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK4                 0.224   MAP/microtubule affinity-regulating kinase 4 
NUAK1                 0.213   AMPK-related protein kinase 5 
SNRK                  0.206   SNF related kinase 
SNRK                  0.206   SNF related kinase 
NUAK2                 0.204   NUAK family, SNF1-like kinase, 2 
PRKAA1                0.199   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA2                0.198   AMP-activated protein kinase alpha 2 catalytic subun...
BRSK2                 0.197   BR serine/threonine kinase 2 
BRSK1                 0.194   BR serine/threonine kinase 1 
HUNK                  0.193   hormonally upregulated Neu-associated kinase 
PRKAA1                0.186   protein kinase, AMP-activated, alpha 1 catalytic sub...
MGC42105              0.186   serine/threonine-protein kinase NIM1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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