Guide to the Human Genome
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Name: MARK1 Sequence: fasta or formatted (795aa) NCBI GI: 153791472
Description:

MAP/microtubule affinity-regulating kinase 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         46           2
 C cysteine            1.1          9           1
 D aspartate           5.0         40           1
 E glutamate           6.9         55           4
 F phenylalanine       3.1         25           1
 G glycine             6.2         49           2
 H histidine           2.3         18           1
 I isoleucine          4.9         39           2
 K lysine              7.2         57           2
 L leucine             7.0         56           3
 M methionine          2.5         20           2
 N asparagine          4.5         36           2
 P proline             5.8         46           2
 Q glutamine           3.4         27           1
 R arginine            7.8         62           2
 S serine             10.7         85           3
 T threonine           6.5         52           2
 V valine              5.8         46           1
 W tryptophan          0.6          5           1
 Y tyrosine            2.8         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAP/microtubule affinity-regulating kinase 1 
MARK2                 0.625   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK3                 0.616   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK2                 0.615   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK3                 0.612   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.606   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK3                 0.597   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK2                 0.586   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.579   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.577   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK4                 0.428   MAP/microtubule affinity-regulating kinase 4 
MARK3                 0.318   MAP/microtubule affinity-regulating kinase 3 isofor...
QSK                   0.227   serine/threonine-protein kinase QSK 
SIK1                  0.216   SNF1-like kinase 
SIK2                  0.209   SNF1-like kinase 2 
BRSK1                 0.165   BR serine/threonine kinase 1 
BRSK2                 0.162   BR serine/threonine kinase 2 
SNRK                  0.157   SNF related kinase 
SNRK                  0.157   SNF related kinase 
PRKAA2                0.155   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.154   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA1                0.148   protein kinase, AMP-activated, alpha 1 catalytic sub...
MGC42105              0.147   serine/threonine-protein kinase NIM1 
NUAK1                 0.145   AMPK-related protein kinase 5 
NUAK2                 0.143   NUAK family, SNF1-like kinase, 2 
MELK                  0.140   maternal embryonic leucine zipper kinase 
HUNK                  0.133   hormonally upregulated Neu-associated kinase 
TSSK3                 0.109   testis-specific serine kinase 3 
TSSK1B                0.106   testis-specific serine kinase 1 
TSSK2                 0.101   testis-specific serine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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