Guide to the Human Genome
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Name: TSSK4 Sequence: fasta or formatted (328aa) NCBI GI: 42734401
Description:

testis-specific serine kinase 4

Referenced in:

Additional Serine / Threonine Protein Kinases
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         20           2
 C cysteine            2.1          7           1
 D aspartate           4.0         13           2
 E glutamate           5.5         18           1
 F phenylalanine       3.7         12           1
 G glycine             5.2         17           2
 H histidine           3.4         11           1
 I isoleucine          6.4         21           2
 K lysine              7.6         25           3
 L leucine            11.3         37           3
 M methionine          2.4          8           1
 N asparagine          3.4         11           1
 P proline             4.0         13           1
 Q glutamine           5.5         18           1
 R arginine            3.7         12           1
 S serine              7.0         23           1
 T threonine           6.1         20           3
 V valine              6.1         20           2
 W tryptophan          1.5          5           1
 Y tyrosine            5.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis-specific serine kinase 4 
TSSK1B                0.309   testis-specific serine kinase 1 
TSSK2                 0.309   testis-specific serine kinase 2 
TSSK3                 0.295   testis-specific serine kinase 3 
TSSK6                 0.272   testis-specific serine kinase 6 
MARK2                 0.232   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.232   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.232   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.232   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.232   MAP/microtubule affinity-regulating kinase 2 isoform...
BRSK2                 0.230   BR serine/threonine kinase 2 
QSK                   0.229   serine/threonine-protein kinase QSK 
SIK2                  0.227   SNF1-like kinase 2 
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.227   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK1                 0.226   MAP/microtubule affinity-regulating kinase 1 
SIK1                  0.224   SNF1-like kinase 
BRSK1                 0.224   BR serine/threonine kinase 1 
MARK4                 0.216   MAP/microtubule affinity-regulating kinase 4 
NUAK1                 0.212   AMPK-related protein kinase 5 
NUAK2                 0.202   NUAK family, SNF1-like kinase, 2 
SNRK                  0.198   SNF related kinase 
SNRK                  0.198   SNF related kinase 
MELK                  0.198   maternal embryonic leucine zipper kinase 
PRKAA2                0.198   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.193   protein kinase, AMP-activated, alpha 1 catalytic sub...
MGC42105              0.182   serine/threonine-protein kinase NIM1 
PRKAA1                0.179   protein kinase, AMP-activated, alpha 1 catalytic sub...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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