Guide to the Human Genome
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Name: KLF12 Sequence: fasta or formatted (402aa) NCBI GI: 21071074
Description:

Kruppel-like factor 12

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         19           1
 C cysteine            1.7          7           1
 D aspartate           4.7         19           4
 E glutamate           4.2         17           1
 F phenylalanine       2.2          9           1
 G glycine             4.5         18           2
 H histidine           4.5         18           1
 I isoleucine          3.2         13           2
 K lysine              5.0         20           1
 L leucine             6.5         26           3
 M methionine          2.7         11           1
 N asparagine          5.0         20           2
 P proline             7.7         31           2
 Q glutamine           3.0         12           2
 R arginine            8.0         32           3
 S serine             15.2         61           6
 T threonine           6.7         27           1
 V valine              8.7         35           3
 W tryptophan          0.5          2           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 12 
KLF8                  0.340   Kruppel-like factor 8 isoform 1 
KLF3                  0.258   Kruppel-like factor 3 (basic) 
KLF5                  0.198   Kruppel-like factor 5 
KLF6                  0.194   Kruppel-like factor 6 isoform A 
KLF7                  0.190   Kruppel-like factor 7 (ubiquitous) 
KLF2                  0.171   Kruppel-like factor 
KLF4                  0.170   Kruppel-like factor 4 (gut) 
KLF1                  0.166   Kruppel-like factor 1 (erythroid) 
KLF15                 0.143   Kruppel-like factor 15 
KLF11                 0.142   Kruppel-like factor 11 
KLF10                 0.139   Kruppel-like factor 10 isoform b 
KLF10                 0.139   Kruppel-like factor 10 isoform a 
KLF13                 0.138   Kruppel-like factor 13 
KLF14                 0.133   Kruppel-like factor 14 
KLF9                  0.133   Kruppel-like factor 9 
KLF16                 0.129   BTE-binding protein 4 
KLF8                  0.125   Kruppel-like factor 8 isoform 2 
KLF17                 0.125   zinc finger protein 393 
SP4                   0.124   Sp4 transcription factor 
WT1                   0.120   Wilms tumor 1 isoform D 
WT1                   0.120   Wilms tumor 1 isoform C 
WT1                   0.120   Wilms tumor 1 isoform B 
WT1                   0.120   Wilms tumor 1 isoform A 
KLF6                  0.115   Kruppel-like factor 6 isoform B 
SP1                   0.115   Sp1 transcription factor isoform a 
SP1                   0.115   Sp1 transcription factor isoform b 
SP6                   0.112   Sp6 transcription factor 
SP7                   0.112   osterix 
SP9                   0.110   Sp9 transcription factor homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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