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Search of human proteins with 7662340
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens]
(970 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens] 1934 0.0
gi|221625538 MORC family CW-type zinc finger 1 [Homo sapiens] 491 e-138
gi|145553976 zinc finger, CW type with coiled-coil domain 2 isof... 129 1e-29
gi|145553971 zinc finger, CW type with coiled-coil domain 2 isof... 129 1e-29
gi|28872812 MORC family CW-type zinc finger 3 [Homo sapiens] 121 3e-27
gi|110349719 titin isoform N2-A [Homo sapiens] 64 7e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 61 4e-09
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 61 6e-09
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 59 2e-08
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 58 5e-08
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 58 5e-08
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 58 5e-08
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 58 5e-08
gi|9945318 MAX binding protein [Homo sapiens] 52 4e-06
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 51 5e-06
gi|24431935 reticulon 4 isoform A [Homo sapiens] 51 6e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 50 8e-06
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 50 1e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 50 1e-05
gi|116284392 mucin 2 precursor [Homo sapiens] 50 1e-05
gi|38788260 bromodomain PHD finger transcription factor isoform ... 49 2e-05
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 49 2e-05
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 49 2e-05
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 49 3e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 3e-05
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 49 3e-05
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 48 4e-05
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 48 4e-05
gi|153792074 proline rich 12 [Homo sapiens] 48 4e-05
gi|24431933 reticulon 4 isoform B [Homo sapiens] 48 5e-05
>gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens]
Length = 970
Score = 1934 bits (5011), Expect = 0.0
Identities = 970/970 (100%), Positives = 970/970 (100%)
Query: 1 MLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKE 60
MLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKE
Sbjct: 1 MLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKE 60
Query: 61 DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE 120
DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE
Sbjct: 61 DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE 120
Query: 121 EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPEGTKPERRSFRA 180
EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPEGTKPERRSFRA
Sbjct: 121 EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPEGTKPERRSFRA 180
Query: 181 YAAVLYIDPRMRIFIHGHKVQTKRLSCCLYKPRMYKYTSSRFKTRAEQEVKKAEHVARIA 240
YAAVLYIDPRMRIFIHGHKVQTKRLSCCLYKPRMYKYTSSRFKTRAEQEVKKAEHVARIA
Sbjct: 181 YAAVLYIDPRMRIFIHGHKVQTKRLSCCLYKPRMYKYTSSRFKTRAEQEVKKAEHVARIA 240
Query: 241 EEKAREAESKARTLEVRLGGDLTRDSRVMLRQVQNRAITLRREADVKKRIKEAKQRALKE 300
EEKAREAESKARTLEVRLGGDLTRDSRVMLRQVQNRAITLRREADVKKRIKEAKQRALKE
Sbjct: 241 EEKAREAESKARTLEVRLGGDLTRDSRVMLRQVQNRAITLRREADVKKRIKEAKQRALKE 300
Query: 301 PKELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLVLE 360
PKELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLVLE
Sbjct: 301 PKELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLVLE 360
Query: 361 PTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSE 420
PTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSE
Sbjct: 361 PTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSE 420
Query: 421 LRYKRRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASEQK 480
LRYKRRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASEQK
Sbjct: 421 LRYKRRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASEQK 480
Query: 481 QKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPS 540
QKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPS
Sbjct: 481 QKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPS 540
Query: 541 TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEA 600
TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEA
Sbjct: 541 TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEA 600
Query: 601 STSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKK 660
STSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKK
Sbjct: 601 STSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKK 660
Query: 661 TESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVKEEKKDSNELSDSAGE 720
TESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVKEEKKDSNELSDSAGE
Sbjct: 661 TESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVKEEKKDSNELSDSAGE 720
Query: 721 EDSADLKRAQKDKGLHVEVRVNREWYTGRVTAVEVGKHVVRWKVKFDYVPTDTTPRDRWV 780
EDSADLKRAQKDKGLHVEVRVNREWYTGRVTAVEVGKHVVRWKVKFDYVPTDTTPRDRWV
Sbjct: 721 EDSADLKRAQKDKGLHVEVRVNREWYTGRVTAVEVGKHVVRWKVKFDYVPTDTTPRDRWV 780
Query: 781 EKGSEDVRLMKPPSPEHQSLDTQQEGGEEEVGPVAQQAIAVAEPSTSECLRIEPDTTALS 840
EKGSEDVRLMKPPSPEHQSLDTQQEGGEEEVGPVAQQAIAVAEPSTSECLRIEPDTTALS
Sbjct: 781 EKGSEDVRLMKPPSPEHQSLDTQQEGGEEEVGPVAQQAIAVAEPSTSECLRIEPDTTALS 840
Query: 841 TNHETIDLLVQILRNCLRYFLPPSFPISKKQLSAMNSDELISFPLKEYFKQYEVGLQNLC 900
TNHETIDLLVQILRNCLRYFLPPSFPISKKQLSAMNSDELISFPLKEYFKQYEVGLQNLC
Sbjct: 841 TNHETIDLLVQILRNCLRYFLPPSFPISKKQLSAMNSDELISFPLKEYFKQYEVGLQNLC 900
Query: 901 NSYQSRADSRAKASEESLRTSERKLRETEEKLQKLRTNIVALLQKVQEDIDINTDDELDA 960
NSYQSRADSRAKASEESLRTSERKLRETEEKLQKLRTNIVALLQKVQEDIDINTDDELDA
Sbjct: 901 NSYQSRADSRAKASEESLRTSERKLRETEEKLQKLRTNIVALLQKVQEDIDINTDDELDA 960
Query: 961 YIEDLITKGD 970
YIEDLITKGD
Sbjct: 961 YIEDLITKGD 970
>gi|221625538 MORC family CW-type zinc finger 1 [Homo sapiens]
Length = 984
Score = 491 bits (1263), Expect = e-138
Identities = 257/518 (49%), Positives = 343/518 (66%), Gaps = 14/518 (2%)
Query: 1 MLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKE 60
MLCFLDDG GM P +A+ +I FG+S KR IGQYGNGLKSGSMRIGKDFILFTKKE
Sbjct: 62 MLCFLDDGCGMSPEEASDIIYFGRSKKRLSTLKFIGQYGNGLKSGSMRIGKDFILFTKKE 121
Query: 61 DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE 120
+TMTC+F S+TF EEE + EV+VP+P+W RTRE VTD+ +KFA+E +IYKYSPF+TE
Sbjct: 122 ETMTCVFFSQTFCEEESLSEVVVPMPSWLIRTRESVTDDPQKFAMELSIIYKYSPFKTEA 181
Query: 121 EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPEGTKPERRSFRA 180
E+M QF I G GTL++I+NLKL+ NGEPELD+ ++ DI MA + P R SFRA
Sbjct: 182 ELMQQFDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILMAGALED--FPARWSFRA 239
Query: 181 YAAVLYIDPRMRIFIHGHKVQTKRLSCCLYKPRMYKYTSSRFKTRAEQEVKKAEHVARIA 240
Y +VLY +P MRIFI +V+TK L CLY+PR Y Y +S FK + EVKKAE +IA
Sbjct: 240 YTSVLYFNPWMRIFIQAKRVKTKHLCYCLYRPRKYLYVTSSFKGAFKDEVKKAEEAVKIA 299
Query: 241 EEKAREAESKARTLEVRLGGDLTRDSRVMLRQVQNRAITLRREADVKKRIKEAKQRALKE 300
E +EA+ K + R S + V RA+ + + K++ + KQR LK
Sbjct: 300 ESILKEAQIKVNQCD--------RTSLSSAKDVLQRAL---EDVEAKQKNLKEKQRELKT 348
Query: 301 PKELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACG-GVVGVVDVPYLVL 359
+ L+ +GVN+E+R GMFIY+ +RLIKM+EKVG QL+ G GVVG+V++P V+
Sbjct: 349 ARTLSLFYGVNVENRSQAGMFIYSNNRLIKMHEKVGSQLKLKSLLGAGVVGIVNIPLEVM 408
Query: 360 EPTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSS 419
EP+HNKQ+F + +EY HLL+ MG++L QY KD I R + F +EFGY + + P +
Sbjct: 409 EPSHNKQEFLNVQEYNHLLKVMGQYLVQYCKDTGINNRNLTLFCNEFGYQNDIDVEKPLN 468
Query: 420 ELRYKRRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASEQ 479
+Y+RR+AM IP IQCDLCLKWR LP + EK++ D W+C+ NP+ ++ C E
Sbjct: 469 SFQYQRRQAMGIPFIIQCDLCLKWRVLPSSTNYQEKEFFDIWICANNPNRLENSCHQVEC 528
Query: 480 KQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQ 517
+PLGT ++ EK+KQL E + + Q +L Q
Sbjct: 529 LPSIPLGTMSTISPSKNEKEKQLRESVIKYQNRLAEQQ 566
Score = 44.3 bits (103), Expect = 6e-04
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 821 VAEPSTSECLRI--EPDTTALSTNHETIDLLVQILRNCLRYFLPPSFPISKKQLSAMNSD 878
+A S S ++ P ++ + ET+ L LR L YF P S+ + A++ +
Sbjct: 791 IARVSVSGSCKVASSPASSQSTPVKETVRKLKSKLREILLYFFPEHQLPSELEEPALSCE 850
Query: 879 -----ELISFPLK--------EYFKQYEVGLQNLCNSYQSRADSRAKASEESLRTSERKL 925
E ++ LK Y QYE ++ S +++R +E SL E K
Sbjct: 851 LEQCPEQMNKKLKMCFNQIQNTYMVQYEKKIKRKLQSIIYDSNTRGIHNEISLGQCENKR 910
Query: 926 RETEEKLQKLRTNIVALLQKVQEDIDINTDDELDAYIEDLI 966
+ +E+KL+ LR + LLQK+Q ++ D Y+E L+
Sbjct: 911 KISEDKLKNLRIKLALLLQKLQLGGPEGDLEQTDTYLEALL 951
>gi|145553976 zinc finger, CW type with coiled-coil domain 2 isoform
a [Homo sapiens]
Length = 937
Score = 129 bits (325), Expect = 1e-29
Identities = 84/228 (36%), Positives = 122/228 (53%), Gaps = 19/228 (8%)
Query: 2 LCFLDDGAGMDPSDAASVIQFGKSAKRTPEST-QIGQYGNGLKSGSMRIGKDFILFTKKE 60
L F DDG GM P ++ FG + K +S IG +GNG KSGSMR+GKD ++FTK
Sbjct: 84 LTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGKDALVFTKNG 143
Query: 61 DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE 120
T+T LS+T+ E VIVP+ +N + ++ + E E I YS F E
Sbjct: 144 GTLTVGLLSQTYLECVQAQAVIVPIVPFNQQNKKMII--TEDSLPSLEAILNYSIFNREN 201
Query: 121 EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPE--------GTK 172
+++ QF IPG GT V+I+N++ NG+ ELD ++ DI +++ E
Sbjct: 202 DLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDILVSDFDTEEKMTGGVTSEL 261
Query: 173 PERR-SFRAYAAVLYIDPRMRIFIHGHKVQTKRLSCCL-------YKP 212
PE S RA+ +LY+ PRM+IF+ KV T+ ++ L YKP
Sbjct: 262 PETEYSLRAFCGILYMKPRMKIFLRQKKVTTQMIAKSLANVEYDTYKP 309
Score = 101 bits (251), Expect = 4e-21
Identities = 119/473 (25%), Positives = 189/473 (39%), Gaps = 80/473 (16%)
Query: 302 KELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACG-GVVGVVDVPYLVLE 360
K++ FG + ++ + G+ +Y+ +RLIK +EKVG Q++ G GV+GV++ +L +
Sbjct: 314 KQVRITFGFSCKNSNQFGIMMYHNNRLIKSFEKVGCQVKPTRGEGVGVIGVIECNFL--K 371
Query: 361 PTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSE 420
P +NKQDF KEYR + A+ + L YWK+ D F E
Sbjct: 372 PAYNKQDFEYTKEYRLTINALAQKLNAYWKEKTSQ--------DNF-------------E 410
Query: 421 LRYKRRRAMEIP--TTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASE 478
R ++P T +QCD CLKWR LP ++ P W C N P+ RC E
Sbjct: 411 TSTVARPIPKVPDQTWVQCDECLKWRKLPGKID--PSMLPARWFCYYNSHPKYRRCSVPE 468
Query: 479 QK----QKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADL--KKLP 532
++ + + L +K +T EEK+K E + + K ++ A L K +
Sbjct: 469 EQELTDEDLCLSKAKKQEQTVEEKKKMPME--NENHQVFSNPPKILTVQEMAGLNNKTIG 526
Query: 533 LEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLP 592
E PS LP+ SR PSL +P + V+ + K
Sbjct: 527 YEGIHSPSV--------------LPS--GGEESRSPSLQL-----KPLDSSVLQFSSKYK 565
Query: 593 ALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKV 652
+ E R LQ T S PAP + +P P ++ + S +
Sbjct: 566 WILGEEPVEKRRRLQ------NEMTTPSLDYSMPAPYRRVEAPVAYPEGENSHDKSSSER 619
Query: 653 IKTPVV--------KKTESPIKLSPATPSRK--RSVAVSDEEEVEEEAERRKERCKRGRF 702
P + K T ++S P K R ++ EE ++ E RG
Sbjct: 620 STPPYLFPEYPEASKNTGQNREVSILYPGAKDQRQGSLLPEELEDQMPRLVAEESNRGST 679
Query: 703 VVKEEKKDSNELSDSAGEEDSADLKRAQKDKGLHVE-VRVNREWYTGRVTAVE 754
+ +E+ + G + + +D G ++ + NRE R AVE
Sbjct: 680 TINKEEVNKGPFVAVVG------VAKGVRDSGAPIQLIPFNREELAERRKAVE 726
>gi|145553971 zinc finger, CW type with coiled-coil domain 2 isoform
b [Homo sapiens]
Length = 900
Score = 129 bits (325), Expect = 1e-29
Identities = 84/228 (36%), Positives = 122/228 (53%), Gaps = 19/228 (8%)
Query: 2 LCFLDDGAGMDPSDAASVIQFGKSAKRTPEST-QIGQYGNGLKSGSMRIGKDFILFTKKE 60
L F DDG GM P ++ FG + K +S IG +GNG KSGSMR+GKD ++FTK
Sbjct: 84 LTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGKDALVFTKNG 143
Query: 61 DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE 120
T+T LS+T+ E VIVP+ +N + ++ + E E I YS F E
Sbjct: 144 GTLTVGLLSQTYLECVQAQAVIVPIVPFNQQNKKMII--TEDSLPSLEAILNYSIFNREN 201
Query: 121 EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPE--------GTK 172
+++ QF IPG GT V+I+N++ NG+ ELD ++ DI +++ E
Sbjct: 202 DLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDILVSDFDTEEKMTGGVTSEL 261
Query: 173 PERR-SFRAYAAVLYIDPRMRIFIHGHKVQTKRLSCCL-------YKP 212
PE S RA+ +LY+ PRM+IF+ KV T+ ++ L YKP
Sbjct: 262 PETEYSLRAFCGILYMKPRMKIFLRQKKVTTQMIAKSLANVEYDTYKP 309
Score = 101 bits (251), Expect = 4e-21
Identities = 119/473 (25%), Positives = 189/473 (39%), Gaps = 80/473 (16%)
Query: 302 KELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACG-GVVGVVDVPYLVLE 360
K++ FG + ++ + G+ +Y+ +RLIK +EKVG Q++ G GV+GV++ +L +
Sbjct: 314 KQVRITFGFSCKNSNQFGIMMYHNNRLIKSFEKVGCQVKPTRGEGVGVIGVIECNFL--K 371
Query: 361 PTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSE 420
P +NKQDF KEYR + A+ + L YWK+ D F E
Sbjct: 372 PAYNKQDFEYTKEYRLTINALAQKLNAYWKEKTSQ--------DNF-------------E 410
Query: 421 LRYKRRRAMEIP--TTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASE 478
R ++P T +QCD CLKWR LP ++ P W C N P+ RC E
Sbjct: 411 TSTVARPIPKVPDQTWVQCDECLKWRKLPGKID--PSMLPARWFCYYNSHPKYRRCSVPE 468
Query: 479 QK----QKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADL--KKLP 532
++ + + L +K +T EEK+K E + + K ++ A L K +
Sbjct: 469 EQELTDEDLCLSKAKKQEQTVEEKKKMPME--NENHQVFSNPPKILTVQEMAGLNNKTIG 526
Query: 533 LEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLP 592
E PS LP+ SR PSL +P + V+ + K
Sbjct: 527 YEGIHSPSV--------------LPS--GGEESRSPSLQL-----KPLDSSVLQFSSKYK 565
Query: 593 ALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKV 652
+ E R LQ T S PAP + +P P ++ + S +
Sbjct: 566 WILGEEPVEKRRRLQ------NEMTTPSLDYSMPAPYRRVEAPVAYPEGENSHDKSSSER 619
Query: 653 IKTPVV--------KKTESPIKLSPATPSRK--RSVAVSDEEEVEEEAERRKERCKRGRF 702
P + K T ++S P K R ++ EE ++ E RG
Sbjct: 620 STPPYLFPEYPEASKNTGQNREVSILYPGAKDQRQGSLLPEELEDQMPRLVAEESNRGST 679
Query: 703 VVKEEKKDSNELSDSAGEEDSADLKRAQKDKGLHVE-VRVNREWYTGRVTAVE 754
+ +E+ + G + + +D G ++ + NRE R AVE
Sbjct: 680 TINKEEVNKGPFVAVVG------VAKGVRDSGAPIQLIPFNREELAERRKAVE 726
>gi|28872812 MORC family CW-type zinc finger 3 [Homo sapiens]
Length = 939
Score = 121 bits (304), Expect = 3e-27
Identities = 156/678 (23%), Positives = 283/678 (41%), Gaps = 89/678 (13%)
Query: 302 KELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLVLEP 361
K + FG N ++D G+ +Y+ +RLIK YEKVG QL GVVG+++ + L+P
Sbjct: 297 KTVRITFGFNCRNKDHYGIMMYHRNRLIKAYEKVGCQLRANNMGVGVVGIIECNF--LKP 354
Query: 362 THNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSEL 421
THNKQDF EYR + A+GE L YW ++ + + N P + +
Sbjct: 355 THNKQDFDYTNEYRLTITALGEKLNDYWNEMKVKK---------------NTEYPLNLPV 399
Query: 422 RYKRRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASEQKQ 481
++R + T +QCD CLKWR LP + + P+ W CS NPDP+ CE E+ +
Sbjct: 400 EDIQKRPDQ--TWVQCDACLKWRKLPDGMDQL----PEKWYCSNNPDPQFRNCEVPEEPE 453
Query: 482 KVPL--GTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRP 539
L T+ K K + +EK Q R A+L P ++T P
Sbjct: 454 DEDLVHPTYEKTYK-------------KTNKEKFRIRQPEMIPRINAELLFRPTALST-P 499
Query: 540 STEEPVRR-PQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPA----L 594
S P P+R S + + P P S K + + + L A L
Sbjct: 500 SFSSPKESVPRRHLSEGTNSYATRLLNNHQVPPQSEPESNSLKRRLSTRSSILNAKNRRL 559
Query: 595 AAREEASTSR---------LLQPPEAPRKPANTLVKTASRPAPLVQ-QLSPSLLPNSKSP 644
+++ E S + +L+ P+ + + S + + Q + + +S+
Sbjct: 560 SSQFENSVYKGDDDDEDVIILEENSTPKPAVDHDIDMKSEQSHVEQGGVQVEFVGDSEPC 619
Query: 645 REVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVV 704
+ S + + + AT + S+ V EE VE+E + R + V
Sbjct: 620 GQTGSTSTSSSRCDQGN------TAATQTEVPSLVVKKEETVEDEIDVRNDAVILPSCVE 673
Query: 705 KEEK-KDSNELSDSAGEEDSADLKRAQKDKGLHVEVRVNRE----WYTGRVTAVEVGKHV 759
E K ++ E +D + ++ L+ + L E + N + +T ++ ++ + +
Sbjct: 674 AEAKIHETQETTDKSADDAGCQLQELRNQLLLVTEEKENYKRQCHMFTDQIKVLQ--QRI 731
Query: 760 VRWKVKFDYVPTDTTPRDRWVEKGSEDVRLM-----KPPSPEHQSLDTQQEGGEEEVGPV 814
+ K YV +T + ++ V L+ K SP+H + +Q + EE+ +
Sbjct: 732 LEMNDK--YVKKETCHQ----STETDAVFLLESINGKSESPDH--MVSQYQQALEEIERL 783
Query: 815 AQQAIAVAEPSTSECLRIEPDTTALSTNHETIDLLVQILRNCLRYFLPPSFPISKKQLSA 874
+Q A+ + +EC + + + S E L + R + + S+ +L
Sbjct: 784 KKQCSAL-QHVKAECSQCS-NNESKSEMDEMAVQLDDVFRQLDKCSIERDQYKSEVELLE 841
Query: 875 MNSDELISFPLKEYFKQYEVGLQNLCNSYQSRADSRAKASEESLRTSERKLRETEEKLQK 934
M + ++ ++ + ++ L ++ Q A + +S ++ S + KL+
Sbjct: 842 MEKSQ-----IRSQCEELKTEVEQLKSTNQQTATDVSTSS--NIEESVNHMDGESLKLRS 894
Query: 935 LRTNIVALLQKVQEDIDI 952
LR N+ LL + D+D+
Sbjct: 895 LRVNVGQLLAMIVPDLDL 912
Score = 119 bits (298), Expect = 1e-26
Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 27/240 (11%)
Query: 2 LCFLDDGAGMDPSDAASVIQFGKSAKRTPES-TQIGQYGNGLKSGSMRIGKDFILFTKKE 60
L F D+G GM ++ FG S K T +G YGNG KSGSMR+GKD I+FTK
Sbjct: 63 LTFTDNGNGMTSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFTKNG 122
Query: 61 DTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNVEKFAIETELIYKYSPFRTEE 120
++M+ LS+T+ E + V+VP+ +N + R+ + N+ + I ++S F TE+
Sbjct: 123 ESMSVGLLSQTYLEVIKAEHVVVPIVAFN-KHRQMI--NLAESKASLAAILEHSLFSTEQ 179
Query: 121 EVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAE-----TSPEGTKPER 175
+++ + I G GT +II+NL+ N E D + DI++ E T +G K +
Sbjct: 180 KLLAELDAIIGKKGTRIIIWNLRSYKNA-TEFDFEKDKYDIRIPEDLDEITGKKGYKKQE 238
Query: 176 R----------SFRAYAAVLYIDPRMRIFIHGHKVQTKRLSCCL-------YKPRMYKYT 218
R S RAY ++LY+ PRM+I + G KV+T+ +S L Y+P+ T
Sbjct: 239 RMDQIAPESDYSLRAYCSILYLKPRMQIILRGQKVKTQLVSKSLAYIERDVYRPKFLSKT 298
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 63.9 bits (154), Expect = 7e-10
Identities = 89/374 (23%), Positives = 151/374 (40%), Gaps = 44/374 (11%)
Query: 488 FRKDMKTQ-EEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEE--P 544
F +++ T EE + E+ ++E+ ++ P+ K+P EV +P EE P
Sbjct: 9910 FEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPV----KVP-EVPRKPVPEEKKP 9964
Query: 545 VRRPQRPRSPP--LPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTP----KLPALAARE 598
V P++ +PP +P V + + P L + P K P + P K+P ++
Sbjct: 9965 VPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKK 10024
Query: 599 -EASTSRLLQPPEAPRKPANT------LVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
EA +++ PE P+KP K P V ++ L+P K P VP
Sbjct: 10025 VEAPPAKV---PEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKV 10081
Query: 652 VIKTPVVKKTESPIKLSPATPSRKRSV----AVSDEEEVEEEAE---RRKERCKRGRFVV 704
P V K P+ + A P + + V +EE + EE E +E V+
Sbjct: 10082 EAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVPEEEVLPEEEEVLPEEEEVLPEEEEVL 10141
Query: 705 KEEKKDSNELSDSAGEEDSA-DLKRAQKDKGLHVEVRVNREWYTGRVTAVEVGKHVVRWK 763
EE++ E + EE+ + + ++ + EV+ E+ K V K
Sbjct: 10142 PEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVLPEVKPK---VPVPAPVPEIKKKVTEKK 10198
Query: 764 V---KFDYVPTDTTPRDRWVEKGSEDVRLMKPPSPEHQSLDTQQEGGEEEVGPVAQQAIA 820
V K + P P V K E+ R++ P E ++ +E EE P++++ I
Sbjct: 10199 VVIPKKEEAPPAKVPE---VPKKVEEKRIILPKEEEVLPVEVTEEPEEE---PISEEEIP 10252
Query: 821 VAEPSTSECLRIEP 834
PS E + P
Sbjct: 10253 EEPPSIEEVEEVAP 10266
Score = 52.8 bits (125), Expect = 2e-06
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 33/252 (13%)
Query: 470 EQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQ---- 525
EQ R E + +KV + ++ E ++ ++ EK + + E +K P +
Sbjct: 10405 EQHRVEEEHRVEKV-----HRVIEVFEAEEVEVFEKPKAPPKGPEISEKIIPPKKPPTKV 10459
Query: 526 ADLKKLPLEVTTRPS---TEEPVRRPQRPRSPP--LPAV-----------IRNAPSRPPS 569
K+ P +V P EE VR P+ PR PP +P V + P++ P
Sbjct: 10460 VPRKEPPAKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPE 10519
Query: 570 LPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEA---PRKPANTLVKTASRP 626
P P+ P++ P P + E +++ + P+A +K + P
Sbjct: 10520 APPPKVPEAPKEVVPEKKVPVPP--PKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESP 10577
Query: 627 APLVQQLSPSLLPNSKSPREVP-SPKV--IKTPVVKKTESPIKLSPATPSRKRSVAVSDE 683
P V + ++P K P P P+V +K P K P K P P +K V +
Sbjct: 10578 PPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKVPVPPPKKPEVPPTKV 10637
Query: 684 EEVEEEAERRKE 695
EV + A K+
Sbjct: 10638 PEVPKVAVPEKK 10649
Score = 52.0 bits (123), Expect = 3e-06
Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 35/243 (14%)
Query: 454 EKDYPDTWVCSMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKL 513
EK P+ ++ P PE E E+ ++V L EE ++ E + E
Sbjct: 10647 EKKVPE----AIPPKPESPPPEVFEEPEEVAL----------EEPPAEVVE----EPEPA 10688
Query: 514 EALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRS----PPLPAVIRNAPSRPPS 569
Q T P + KK P V +P PV+ P+ P+ +P V+ P PP+
Sbjct: 10689 APPQVTVPPKKPVPEKKAPAVVAKKPELP-PVKVPEVPKEVVPEKKVPLVVPKKPEAPPA 10747
Query: 570 -LPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAP 628
+P P K + P++P A + + P KPA + + A P P
Sbjct: 10748 KVPEVPKEVVPEKKVAVPKKPEVPP------AKVPEVPKKPVLEEKPAVPVPERAESPPP 10801
Query: 629 LVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEE 688
V + P +P E +P+ K V + E P PA P + + + V +
Sbjct: 10802 EVYEE-----PEEIAPEEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIK 10856
Query: 689 EAE 691
+ E
Sbjct: 10857 KPE 10859
Score = 46.2 bits (108), Expect = 1e-04
Identities = 107/526 (20%), Positives = 194/526 (36%), Gaps = 67/526 (12%)
Query: 477 SEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPI---------RSQAD 527
+E++ V + +K++ T+E+ +++++ + E +K P + +
Sbjct: 9253 TEEEVSVTVPEVQKEIVTEEKIHVAISKRVEPPPKVPELPEKPAPEEVAPVPIPKKVEPP 9312
Query: 528 LKKLPLEVTTRPSTEE----------PVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPAS 577
K+P EV +P EE P P+ P P P P PA
Sbjct: 9313 APKVP-EVPKKPVPEEKKPVPVPKKEPAAPPKVPEVPKKPVPEEKIPVPVAKKKEAPPAK 9371
Query: 578 QPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASR------PAPLVQ 631
P + + K+ + REE+ + PE P+K K R P P V
Sbjct: 9372 VPEVQKGVVTEEKITIVTQREESPPPAV---PEIPKKKVPEERKPVPRKEEEVPPPPKVP 9428
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTP---VVKKT-------ESPIKLSPATPSRKRSVAVS 681
L +P K VP K P V KKT + KLS A P R
Sbjct: 9429 ALPKKPVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQRVE--VTR 9486
Query: 682 DEEEVEEEAERRKERCKRGRFVVKEEKKDSNELSDSAGEEDSADLKRAQKDKGLH-VEVR 740
E EEE +E V +EE+++ E ++ E + + ++ LH + R
Sbjct: 9487 HEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEEYVVEEKLHIISKR 9546
Query: 741 VNREWYTGRVTAVEVGKHVVRWKV--KFDYVPTDTTPRDRWVEKGSEDVRLMKPPSPEHQ 798
V E VT + K V++ K+ K + P P K + + P P+ +
Sbjct: 9547 VEAE--PAEVTERQEKKIVLKPKIPAKIEEPPPAKVPE---APKKIVPEKKVPAPVPKKE 9601
Query: 799 SLDTQQEGGEEEVGPVAQQAIAVAEPSTSECLRIEPDTTALSTNHETIDLLVQILRNCLR 858
+ + EE PV ++ + P + EP ++ H I ++L +
Sbjct: 9602 KVPPPKV-PEEPKKPVPEKKV---PPKVIK--MEEPLPAKVTERHMQITQEEKVLVAVTK 9655
Query: 859 YFLPPSFPISKKQLSAMNSDELISF-PLKEYFKQYEVGLQNLCNSYQSRADSRAKASEES 917
PP + ++ A+ ++++ P +E +V ++ R K S E+
Sbjct: 9656 KEAPPKARVPEEPKRAVPEEKVLKLKPKREEEPPAKV------TEFRKRVVKEEKVSIEA 9709
Query: 918 LRTSERKLRETEEKLQKLRTNIVALLQKVQEDIDINTDDELDAYIE 963
+ + ++E +K R + +E + + ++E + Y E
Sbjct: 9710 PKREPQPIKEVTIMEEKERAYTLE-----EEAVSVQREEEYEEYEE 9750
Score = 45.4 bits (106), Expect = 3e-04
Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 39/212 (18%)
Query: 496 EEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPP 555
EE +++ E+ + +E + +K P++ P EEPV P +P++PP
Sbjct: 9769 EEYEEREYERYEEHEEYITEPEKPIPVK---------------PVPEEPV--PTKPKAPP 9811
Query: 556 LPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKP 615
+ + P +P P+ P P+ P E+ S + E +P
Sbjct: 9812 AKVLKKAVPEEKVPVPIPKKLKPPPP-----KVPEEPKKVFEEKIRISITKREKEQVTEP 9866
Query: 616 ANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
A K +P +V + +VP P+ P V+ E P +L P + +
Sbjct: 9867 A---AKVPMKPKRVVAE------------EKVPVPRKEVAPPVRVPEVPKELEPEEVAFE 9911
Query: 676 RSVAVSDEEEVEEEAERRKERCKRGRFVVKEE 707
V EE + EE E + F+ +EE
Sbjct: 9912 EEVVTHVEEYLVEEEEEYIH--EEEEFITEEE 9941
Score = 44.7 bits (104), Expect = 4e-04
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 17/237 (7%)
Query: 467 PDPEQ--DRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRS 524
P+PE+ ++ + + P ++D+K + + K + +K ++ ++ + TP++
Sbjct: 10866 PEPEKVIEKPKLKPRPPPPPPAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVELTPLKV 10925
Query: 525 QADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPV 584
KK+ + P R+P+ L +V+R P P+ + +K V
Sbjct: 10926 PGGEKKVRKLL--------PERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAV 10977
Query: 585 ISSTPKLPALAAREEASTSRLLQPPEAPR----KPANTLVKTASRPAPLVQQLSPSLLPN 640
P P T R + PE + KPA L A P P + ++ P
Sbjct: 10978 PEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPL--PAPEPKPKPEAEVKTIKPP 11035
Query: 641 SKSPREVPSPKVIKTPVV-KKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKER 696
P P + PVV KK E+ A + V + EAERRK R
Sbjct: 11036 PVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKGVPKKTPSPIEAERRKLR 11092
Score = 43.1 bits (100), Expect = 0.001
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 11/174 (6%)
Query: 529 KKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISST 588
KK+P +P PV+ P+ P+ +P + P PP P P P V
Sbjct: 10592 KKVPAAPPKKPEVT-PVKVPEAPKEV-VPE--KKVPVPPPKKPEVPPTKVPEVPKVAVPE 10647
Query: 589 PKLP-ALAAREEASTSRLLQPPE--APRKPANTLVKTASRPAPLVQQLSPSL-LPNSKSP 644
K+P A+ + E+ + + PE A +P +V+ AP + P +P K+P
Sbjct: 10648 KKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKPVPEKKAP 10707
Query: 645 REV---PSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKE 695
V P +K P V K P K P +K + EV +E K+
Sbjct: 10708 AVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEVPKEVVPEKK 10761
Score = 41.2 bits (95), Expect = 0.005
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 34/160 (21%)
Query: 478 EQKQKVPLGTFRKDMKTQ--------EEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLK 529
E K KVP+ ++K + +K++ K+ + +K+E + P +
Sbjct: 10176 EVKPKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEV--- 10232
Query: 530 KLPLEVTTRPSTEEPVRRPQRPRSPP------------LPAVIRNAPSRPPSLPTPRP-- 575
LP+EVT P EEP+ + P PP +P VI+ A P PTP P
Sbjct: 10233 -LPVEVTEEPE-EEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKKA---VPEAPTPVPKK 10287
Query: 576 -ASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRK 614
+ P K K+P ++EA +++ PE P+K
Sbjct: 10288 VEAPPAKVSKKIPEEKVPVPVQKKEAPPAKV---PEVPKK 10324
Score = 40.0 bits (92), Expect = 0.011
Identities = 73/338 (21%), Positives = 117/338 (34%), Gaps = 89/338 (26%)
Query: 469 PEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADL 528
PE R E+K+ VP+ K +E ++ E ++ +EK+ L P + +
Sbjct: 9951 PEVPRKPVPEEKKPVPVP------KKKEAPPAKVPEVPKKPEEKVPVL---IPKKEKPPP 10001
Query: 529 KKLPLEVTTRPSTEE-------------PVRRPQRPRSP--------PLPAVIRNAPSRP 567
K+P EV +P EE P + P+ P+ P P P + P++
Sbjct: 10002 AKVP-EVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKV 10060
Query: 568 PSLPTP------RPASQPRKAPVISSTPKLP----------ALAAREEASTSRLLQPPEA 611
P +P +P P+K V + PK+P AL EE + P E
Sbjct: 10061 PEVPKKLIPEEKKPTPVPKK--VEAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVPEEE 10118
Query: 612 PRKPANTLVKTASRPAPLVQQLSPS-----------------------------LLPNSK 642
++ P +++ P +LP K
Sbjct: 10119 VLPEEEEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVLPEVK 10178
Query: 643 SPREVPSP------KVIKTPVV--KKTESPIKLSPATPSR---KRSVAVSDEEEVEEEAE 691
VP+P KV + VV KK E+P P P + KR + +EE + E
Sbjct: 10179 PKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVT 10238
Query: 692 RRKERCKRGRFVVKEEKKDSNELSDSAGEEDSADLKRA 729
E + EE E+ + A +K+A
Sbjct: 10239 EEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKKA 10276
Score = 39.3 bits (90), Expect = 0.018
Identities = 55/228 (24%), Positives = 87/228 (38%), Gaps = 41/228 (17%)
Query: 499 QKQLTEKIRQQQEKLEALQKTTPIRSQADLKKL--PLEVTTRPSTEEPVRRPQRPRSPPL 556
QK++ E+ +++ + +K P + K + +E T+R EE V+ + P
Sbjct: 9153 QKEVYEESHERKVPAKVPEKKAPPPPKVIKKPVIEKIEKTSRRMEEEKVQVTKVPEVSK- 9211
Query: 557 PAVIRNAPSRPPS----LPTPRPASQPRKAPVISSTPKLPALAAREEAST---------- 602
++ PSR P + PA +K VIS A EE S
Sbjct: 9212 -KIVPQKPSRTPVQEEVIEVKVPAVHTKKM-VISEEKMFFASHTEEEVSVTVPEVQKEIV 9269
Query: 603 ---------SRLLQPP----EAPRKPANTLV------KTASRPAPLVQQLSPSLLPNSKS 643
S+ ++PP E P KPA V K PAP V ++ +P K
Sbjct: 9270 TEEKIHVAISKRVEPPPKVPELPEKPAPEEVAPVPIPKKVEPPAPKVPEVPKKPVPEEKK 9329
Query: 644 PREVPSPKVI---KTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEE 688
P VP + K P V K P + P ++K+ + EV++
Sbjct: 9330 PVPVPKKEPAAPPKVPEVPKKPVPEEKIPVPVAKKKEAPPAKVPEVQK 9377
Score = 35.4 bits (80), Expect = 0.26
Identities = 56/281 (19%), Positives = 107/281 (38%), Gaps = 27/281 (9%)
Query: 425 RRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCEASEQKQKVP 484
+RR E+P ++ +L RT + +SS +K + +S ++ K
Sbjct: 32474 QRRDEEVPRSVFPELT---RTEAYAVSSFKKT-------------SEMEASSSVREVKSQ 32517
Query: 485 LGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEP 544
+ R+ + + E + +++ LE T I++ + L + E
Sbjct: 32518 MTETRESLSSYEHSASAEMKSAALEEKSLEEKSTTRKIKTTLAARILTKPRSMTVYEGES 32577
Query: 545 VRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTSR 604
R P+P V + S + + ST ++ ++ A +E + S
Sbjct: 32578 ARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTK----YKSTFEISSVQASDEGNYSV 32633
Query: 605 LLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLL---PNSKSPREVPSPKVIKTPVVK-- 659
+++ E ++ TL +R P + P KSP V SPK +K+P
Sbjct: 32634 VVENSEGKQEAEFTLTIQKARVTEKAVTSPPRVKSPEPRVKSPEAVKSPKRVKSPEPSHP 32693
Query: 660 KTESPIKLSPATPSRKRSVAVSDEEEVEE--EAERRKERCK 698
K SP + P + + + VS ++ + +AE KE K
Sbjct: 32694 KAVSPTETKPTPTEKVQHLPVSAPPKITQFLKAEASKEIAK 32734
Score = 34.3 bits (77), Expect = 0.58
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 454 EKDYPDTWVCSMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKL 513
+++ P V + E+ R ++++ +P+ ++ + E++ E+I ++ +
Sbjct: 10204 KEEAPPAKVPEVPKKVEEKRIILPKEEEVLPV-----EVTEEPEEEPISEEEIPEEPPSI 10258
Query: 514 EALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTP 573
E +++ P R +KK E T PV P++ +PP V + P +P
Sbjct: 10259 EEVEEVAPPRVPEVIKKAVPEAPT------PV--PKKVEAPP-AKVSKKIPEEKVPVPVQ 10309
Query: 574 RPASQPRKAP-VISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQ 632
+ + P K P V P+ L ++EA PP R V A R +V++
Sbjct: 10310 KKEAPPAKVPEVPKKVPEKKVLVPKKEA------VPPAKGRTVLEEKVSVAFRQEVVVKE 10363
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 61.2 bits (147), Expect = 4e-09
Identities = 46/149 (30%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRS---PPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISST 588
P+ + P+T P P P S P LPAV +P PP+ +S P+KAP +
Sbjct: 1440 PVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAP 1499
Query: 589 PKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVP 648
P L A +S + P + R P S+ P +L+P + + VP
Sbjct: 1500 MGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMT---VP 1556
Query: 649 SPKVIKTPVVKKTESPIKLSPATPSRKRS 677
SPK KTP + K +PATPS K +
Sbjct: 1557 SPK--KTPAIPTP----KEAPATPSSKEA 1579
Score = 57.4 bits (137), Expect = 6e-08
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKL 591
P +V T S ++ P +P LPAVI ++P P+ P+ R A ++S K
Sbjct: 1481 PKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSK--KT 1538
Query: 592 PALAAREEASTSRLLQPPEAPRKPANTLVKTA-----SRPAPLVQQLSPSLLPNSKSPRE 646
PA A +EA + P + PA K A S+ A ++PS + SP+E
Sbjct: 1539 PATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKE 1598
Query: 647 VPSPKVIKTPVVKKTESPIKLSPATPSR 674
+ P + +P K+ +P ++P +P +
Sbjct: 1599 LLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626
Score = 51.6 bits (122), Expect = 4e-06
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 537 TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPR-------------PASQP---R 580
T PS + P P PAVI +P + P+ P R PA P +
Sbjct: 1385 TPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLK 1444
Query: 581 KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTAS-------RPAPLVQQL 633
KAP S+ PA + + T + PP PA V T+S PAP+
Sbjct: 1445 KAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPT 1504
Query: 634 SPSLLPNSKSPREVP-SPKVIKTPVVKKTESPIKLSPATPSRKRSV 678
P+++P+ SP+EVP +P + P+ K +PAT + K ++
Sbjct: 1505 LPAVIPS--SPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEAL 1548
Score = 50.4 bits (119), Expect = 8e-06
Identities = 46/155 (29%), Positives = 59/155 (38%), Gaps = 18/155 (11%)
Query: 529 KKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNA-PSRPPSLPTPRPA-------SQPR 580
K P P + + V P P+ P P+V+ P P+ P P+ A S P+
Sbjct: 862 KGAPTPSAVTPLSPKGVTLP--PKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPK 919
Query: 581 KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPN 640
KA + +PA + + A T PP PA K A P P+
Sbjct: 920 KARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATP-------PS 972
Query: 641 SKSPREVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
K PSPK TP SP K PATPS K
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSP-KGGPATPSPK 1006
Score = 48.5 bits (114), Expect = 3e-05
Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 8/145 (5%)
Query: 537 TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAA 596
T PS + + P +P PA +P P+ P P+ A P A S L A
Sbjct: 1224 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGL-ATPP 1282
Query: 597 REEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIK-- 654
+ A ++ PP PA + K A P P SP P + P+ P+P +
Sbjct: 1283 HKGAPNPAVVTPPSPKGGPATSPPKGAPTP-PAATPPSPKGSPGTPPPKGAPTPPAVTPP 1341
Query: 655 ----TPVVKKTESPIKLSPATPSRK 675
TP + T K P TPS K
Sbjct: 1342 SPKGTPTLPATTPSSKGGPTTPSSK 1366
Score = 46.2 bits (108), Expect = 1e-04
Identities = 46/167 (27%), Positives = 60/167 (35%), Gaps = 17/167 (10%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLP------- 571
T P + K P + + + P P P+ P + AP+ P + P
Sbjct: 941 TPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGP 1000
Query: 572 -TPRPASQPRKAPVISSTPKLPALAA--REEASTSRLLQPPEAPRKPANTLVKTASRPAP 628
TP P P V +PK A + AST PP PA T + + P
Sbjct: 1001 ATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTP 1060
Query: 629 LVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
+ LP+ K PS K TP SP K PATPS K
Sbjct: 1061 ------AATLPSPKGGPATPSLKGAPTPPAATPPSP-KGGPATPSPK 1100
Score = 45.4 bits (106), Expect = 3e-04
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPR--PAS------QPRKAPVISS 587
TT S E P P PA+ +P R P++P+P+ P S P+KAP
Sbjct: 1361 TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPV 1420
Query: 588 TPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTA-SRPAPLVQQLSPSLLPNSKSPRE 646
T + A ++ + T + P + PA + K + P+ P++ P SP+E
Sbjct: 1421 TREGAATPSKGDL-TPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTP--PSPKE 1477
Query: 647 VPSPKVIKTPVVKKTESPIKLSPATPS 673
P+PK + T + SP K +PATP+
Sbjct: 1478 PPAPKQVAT-----SSSP-KKAPATPA 1498
Score = 45.1 bits (105), Expect = 3e-04
Identities = 39/157 (24%), Positives = 51/157 (32%), Gaps = 15/157 (9%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
T P + K P + + + P P P+ P S PP+ P P
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS 1046
Query: 579 PRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLL 638
P P+ P PA P PA +K A P P SP
Sbjct: 1047 PAATPLPKGAPTTPAATL------------PSPKGGPATPSLKGAPTP-PAATPPSPKGG 1093
Query: 639 PNSKSPREVPSPKVIKTPVVK--KTESPIKLSPATPS 673
P + SP+ P P P K P K +P TP+
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPA 1130
Score = 42.4 bits (98), Expect = 0.002
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 561 RNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTS--RLLQPPEAPRKPAN- 617
+++P+ S P P P + V +PK L +E + S L P E P PA
Sbjct: 847 KDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPK 906
Query: 618 ---TLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSR 674
L T+S P +P +P S SP+ P+P P SP K PATPS
Sbjct: 907 QAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPP------SP-KGGPATPSP 959
Query: 675 K 675
K
Sbjct: 960 K 960
Score = 40.8 bits (94), Expect = 0.006
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 557 PAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPA 616
PA+ +P + P++PTP+ A + SS P + + S LL PP A P+
Sbjct: 1551 PAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPP-AVTSPS 1609
Query: 617 NTLVKTASRPAPLVQQLSPSLLPNSKSPREVP-SPKVIKTPVVKKTESPIKLSPATPS 673
K A P P V SP P + +P+ P SP V T S +K SP +P+
Sbjct: 1610 ---PKEAPTP-PAVTPPSPEKGPATPAPKGTPTSPPV--------TPSSLKDSPTSPA 1655
Score = 39.7 bits (91), Expect = 0.014
Identities = 41/144 (28%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 535 VTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKA--PVISSTPKLP 592
V T PS + +P PA +P P P P+ A P P TP LP
Sbjct: 1291 VVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP 1350
Query: 593 ALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVP-SPK 651
A + + E P PA T + + P + SP P SP+ P SP
Sbjct: 1351 ATTPSSKGGPT-TPSSKEGPTPPAAT---PSHKGGPAMTPPSPKRGPAIPSPKGDPTSPA 1406
Query: 652 VIKTPVVKKTESPI-KLSPATPSR 674
VI K +P+ + ATPS+
Sbjct: 1407 VIPLSPKKAPATPVTREGAATPSK 1430
Score = 38.9 bits (89), Expect = 0.024
Identities = 39/139 (28%), Positives = 48/139 (34%), Gaps = 9/139 (6%)
Query: 537 TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAA 596
T PS + + P +P PA PS L TP P P ++TP P
Sbjct: 1109 TPPSPKGGLATPPHKGAPTTPAA--TPPSPKGGLATPPPKGAPTTP---AATPPSPKGGL 1163
Query: 597 REEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTP 656
P P P L + + AP +P P+ K PSPK T
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP---PSPKGGLATPSPKGAPTT 1220
Query: 657 VVKKTESPIKLSPATPSRK 675
SP K ATPS K
Sbjct: 1221 PAATPPSP-KGGLATPSPK 1238
Score = 37.0 bits (84), Expect = 0.090
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 14/157 (8%)
Query: 509 QQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPP 568
QQ L A + +P S + + PLEV P + P +P P + N PP
Sbjct: 54 QQCPLSAANQASPFPSPSTIASTPLEVPF-PQSSSGTALPLGT-APEAPTFLPNLIG-PP 110
Query: 569 SLPTPRPASQPRKAPVISSTPK------LPALAAREEASTSRLLQPPEAPRKPANTLVKT 622
P + P AP + TP L ALA +S PP P + V
Sbjct: 111 ISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAF--PPNLLTSPPSVAVAE 168
Query: 623 ASRPAPLVQQLSPSLLPN--SKSPRE-VPSPKVIKTP 656
+ L ++PS +K P E VP+PK +P
Sbjct: 169 SGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSP 205
Score = 37.0 bits (84), Expect = 0.090
Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 537 TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLP-ALA 595
T PS + + P +P PA PS L TP P P +PK A
Sbjct: 1178 TPPSPKGGLATPSPKGAPTTPAA--TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1235
Query: 596 AREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSP--REVPSPKVI 653
+ + A T+ PP PA K A P PSL +P + P+P V+
Sbjct: 1236 SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT---PPSLKGGLATPPHKGAPNPAVV 1292
Query: 654 KTPVVK--KTESPIKLSPATPS 673
P K SP K +P P+
Sbjct: 1293 TPPSPKGGPATSPPKGAPTPPA 1314
Score = 36.6 bits (83), Expect = 0.12
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 20/147 (13%)
Query: 545 VRRPQRPRSPPLPAVIRNAPSRPPSLPTPR--PASQPRKAPVISSTPKLPALAAREEAST 602
V P +P PAV +P + P+ P P+ P S P + +P PA + +T
Sbjct: 1605 VTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGAT 1664
Query: 603 ----SRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPR----EVPSPKVIK 654
S+ L + P LV A P++ P K P+ SP +
Sbjct: 1665 VPQASKGLPAKKGPTALKEVLVAPAPESTPII------TAPTRKGPQTKKSSATSPPICP 1718
Query: 655 TPVVKKTE----SPIKLSPATPSRKRS 677
P K S + +P P +K S
Sbjct: 1719 DPSAKNGSKGPLSTVAPAPLLPVQKDS 1745
Score = 34.3 bits (77), Expect = 0.58
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 531 LPLEVT-TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTP 589
+P E T T P+TE+ + +PQ + LP + +A S +L P P P +P P
Sbjct: 1 MPGEATETVPATEQELPQPQA-ETAVLP--MSSALSVTAALGQPGPTLPPPCSPAPQQCP 57
Query: 590 KLPALAAREEASTSRLLQPP---EAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
A A S S + P P+ + T + + P +P+ LPN P
Sbjct: 58 LSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPE------APTFLPNLIGPPI 111
Query: 647 VPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVS 681
P+ + +P++ T +K +P++ + VA++
Sbjct: 112 SPAALALASPMIAPT---LKGTPSSSAPLALVALA 143
Score = 33.1 bits (74), Expect = 1.3
Identities = 43/167 (25%), Positives = 60/167 (35%), Gaps = 14/167 (8%)
Query: 521 PIRSQADL--KKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
PI A L KK P + + + P P+ P + AP+ P S +S
Sbjct: 1526 PIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSS---KEASSP 1582
Query: 579 PRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANT---LVKTASRPAPLVQQLSP 635
P P P A TS P EAP PA T K + PAP SP
Sbjct: 1583 PAVTPSTYKGAPSPKELLIPPAVTSP--SPKEAPTPPAVTPPSPEKGPATPAPKGTPTSP 1640
Query: 636 SLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSD 682
+ P+S SP + K + + S P++K A+ +
Sbjct: 1641 PVTPSSLK----DSPTSPASVTCKMGATVPQASKGLPAKKGPTALKE 1683
Score = 32.3 bits (72), Expect = 2.2
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 19/148 (12%)
Query: 535 VTTRPSTEEPVRRPQRPRSPPL---PAVIRNAPSRP-------PSLPTPRPASQPRKAPV 584
+ T P+ + P + SPP+ P+ +N P P LP + +S+ K
Sbjct: 1695 IITAPTRKGPQTKKSSATSPPICPDPSA-KNGSKGPLSTVAPAPLLPVQKDSSKTAKGKD 1753
Query: 585 ISSTPKLPALAAREEASTSRLLQPPE-APRKPANTLVKTASRPAPLVQQLSPSLLPNSKS 643
S +PK P +AST E KP + V A P P+ L+PS +P
Sbjct: 1754 ASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSP-PVSLPLAPSPVPTLP- 1811
Query: 644 PREVPSPKVIKTPVVKKTESPIK-LSPA 670
P + + + ESP K L+PA
Sbjct: 1812 ----PKQQFLPSSPGLVLESPSKPLAPA 1835
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 60.8 bits (146), Expect = 6e-09
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 42/272 (15%)
Query: 467 PDPEQDRCEASE--QKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRS 524
P E+ R A + +K K P+ ++++K+ E+ + L E + ++++ K ++S
Sbjct: 769 PAKEEARSPADKFPEKAKSPV---KEEVKSPEKAKSPLKEDAKAPEKEIP---KKEEVKS 822
Query: 525 QADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLP---TPRPASQPRK 581
++ P EV + EP ++ + ++P P S+ P P+P + +K
Sbjct: 823 PVKEEEKPQEVKVK----EPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKK 878
Query: 582 APVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNS 641
P + + A +EEA + + PE PA VK ++P
Sbjct: 879 EPAVEKPKESKVEAKKEEAEDKKKVPTPEK-EAPAKVEVKEDAKPKE------------- 924
Query: 642 KSPREVPSPKVIKTPVVKKTESPIKLS-PATPSRKRSVAVSDEEEVEEEAERRKERCKRG 700
KT V KK K P+ P+ K+ A ++ EE+A++ +E+ K
Sbjct: 925 ------------KTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTE 972
Query: 701 RFVVKEEKKDSNELSDSAGEEDSADLKRAQKD 732
+++K S E S E+ QKD
Sbjct: 973 AKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKD 1004
Score = 58.9 bits (141), Expect = 2e-08
Identities = 84/384 (21%), Positives = 152/384 (39%), Gaps = 43/384 (11%)
Query: 470 EQDRCEASEQKQKVP----LGTFRKDMKT--QEEKQKQLTEKIRQQQEKLEALQKTTPIR 523
E++ E E++ K P + K+ K+ +EE + K +++E + +P +
Sbjct: 490 EEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEK 549
Query: 524 SQADLK---KLPLEVTTRPSTEEP-----VRRPQRPRSPPLPAVIRNAPSRPPSLPTPRP 575
+++ K K P E + P EE V+ P++ +SP A ++ P P
Sbjct: 550 AKSPAKEEAKSPPEAKS-PEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPE-KAKSP 607
Query: 576 ASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRP-------AP 628
+ K+P + +P +EEA + ++ PE + P K+ + A
Sbjct: 608 VKEEAKSPAEAKSP------VKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAK 661
Query: 629 LVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEE 688
++ + +KSP + SP + +K +SP+K +P + +S + + E+
Sbjct: 662 SPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEK 721
Query: 689 EAERRKERCK---RGRFVVKEEKKDSNELSDSAGEEDSADLKRAQKDKGLHVEVRVNREW 745
KE K + + VKEE K S E + S + + D+K + E R +
Sbjct: 722 AKSPVKEEAKTPEKAKSPVKEEAK-SPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADK 780
Query: 746 YTGRVTAVEVGKHVVRWKVKFDYVPTDTTPRD-RWVEKGSEDVRLMKPPSPEHQSLDTQQ 804
+ E K V+ +VK D + EK +K P E + Q
Sbjct: 781 FP------EKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEK---PQ 831
Query: 805 EGGEEEVGPVAQQAIAVAEPSTSE 828
E +E A++ A A P T E
Sbjct: 832 EVKVKEPPKKAEEEKAPATPKTEE 855
Score = 49.3 bits (116), Expect = 2e-05
Identities = 86/369 (23%), Positives = 141/369 (38%), Gaps = 51/369 (13%)
Query: 497 EKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRR----PQRPR 552
EK K T++ + EK ++ +K + + E + + PV+ P++ +
Sbjct: 636 EKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAK 695
Query: 553 SPPLPAVIRNAPSRPPSLPTPRPASQPRKA--PVI--SSTPKLPALAAREEASTSRLLQP 608
SP +P + S P A P KA PV + TP+ +EEA + +
Sbjct: 696 SPVKEEA--KSPEKAKS-PVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKS 752
Query: 609 PEAPRKPANTL-VKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKL 667
PE A TL VK+ P ++ P K P + SP + +K +SP+K
Sbjct: 753 PEK----AKTLDVKSPEAKTPAKEEARS---PADKFPEKAKSPVKEEVKSPEKAKSPLKE 805
Query: 668 SPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVKEEK----KDSNELSDSAGEEDS 723
P ++ + V+EE + ++ + K +EEK + E DS EE
Sbjct: 806 DAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEE-- 863
Query: 724 ADLKRAQKDKGLHVEVRVNREWYTGRVTAVEVGKHVVRWKVKFDYVPT------------ 771
A K A K K VE + + + VE K K K VPT
Sbjct: 864 APKKEAPKPK---VEEKKEPAVEKPKESKVEAKKEEAEDKKK---VPTPEKEAPAKVEVK 917
Query: 772 -DTTPRDRW--VEKGSEDVRLMKPPSPEHQSLDTQQEGGEEEVGPVAQQAIAVAEPSTSE 828
D P+++ +K +D + +P P ++E E+ ++A E +E
Sbjct: 918 EDAKPKEKTEVAKKEPDDAKAKEPSKPAE-----KKEAAPEKKDTKEEKAKKPEEKPKTE 972
Query: 829 CLRIEPDTT 837
E D T
Sbjct: 973 AKAKEDDKT 981
Score = 30.4 bits (67), Expect = 8.4
Identities = 66/316 (20%), Positives = 114/316 (36%), Gaps = 71/316 (22%)
Query: 470 EQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLK 529
E+ R E ++ Q D+ + +E +QL ++R + ++ A +R DL
Sbjct: 343 ERQRSELEDRHQA--------DIASYQEAIQQLDAELRNTKWEMAA-----QLREYQDLL 389
Query: 530 KLPLEVTTRPSTEEPVRRPQRPRSP--PLPAVIRNAPSRPPSLPTPRPASQPRKAPVISS 587
+ + + + + + R P+P + + PS+ T K V+
Sbjct: 390 NVKMALDIEIAAYRKLLEGEECRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEK 449
Query: 588 TPKLPALAAREEASTSRLLQPPEAPRKPANTLV-----------------KTASRPA--- 627
+ K + + T + E K A +T S PA
Sbjct: 450 SEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEA 509
Query: 628 --PLVQQLSPSLLPNSKSPREVPSPK--------VIKTPVVKKTESPIKLSPATPSRKRS 677
P + SP + +KSP E SP+ +K+P +K +SP K +P +S
Sbjct: 510 ASPEKEAKSP-VKEEAKSPAEAKSPEKEEAKSPAEVKSP--EKAKSPAKEEAKSPPEAKS 566
Query: 678 VAVSDEEEVEEEAERR---------KERCK---------RGRFVVKEEKKDSNELSDSAG 719
++EE + AE + KE K + + VKEE K E
Sbjct: 567 ---PEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVK 623
Query: 720 EE--DSADLKRAQKDK 733
EE A++K +K K
Sbjct: 624 EEAKSPAEVKSPEKAK 639
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 58.9 bits (141), Expect = 2e-08
Identities = 69/281 (24%), Positives = 111/281 (39%), Gaps = 24/281 (8%)
Query: 466 NPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQ 525
+P P + R EAS ++K +KD + + EK+K + R +++ S
Sbjct: 399 SPAPVRRRPEASPVQKKE-----KKDKERENEKEKSALARERSLKKRQSLPASPRARLSA 453
Query: 526 ADLKKLPLEVTTRPSTEEPVRRPQRPRSP-PLPAVIRNAPSRPPSLPTPRPASQPRKAPV 584
+ +L + RPS+ P RP SP P P P +PPS P AS +
Sbjct: 454 STASELSPKSKARPSS--PSTSWHRPASPCPSPGPGHTLPPKPPS-PRGTTASPKGRVRR 510
Query: 585 ISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTA-SRPAPLVQQLSPSLLPNSKS 643
+ P+ A E+ S S+ R+ +N A + PAP SP+ P
Sbjct: 511 KEEAKESPSAAGPEDKSQSK--------RRASNEKESAAPASPAP-----SPAPSPTPAP 557
Query: 644 PREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFV 703
P++ P T T P P TPS+ + EE AE+R++ + R
Sbjct: 558 PQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQ-AREQRER 616
Query: 704 VKEEKKDSNELSDSAGEEDSADLKRAQKDKGLHVEVRVNRE 744
++E++ E EE A A+ ++ R +E
Sbjct: 617 EEQERRLQAERDKRMREEQLAREAEARAEREAEARRREEQE 657
Score = 43.9 bits (102), Expect = 7e-04
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 557 PAVIRNAPSRPPSLPT--PRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRK 614
PAV+ P P P P P P A V + P P A + A++S+ L P +
Sbjct: 15 PAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPPDTP--PAMKNATSSKQL-----PLE 67
Query: 615 PANTLVKTASRPAPLVQQLSPSLLPNSKSPR-EVPSPKVIKTPVVKKTESPIKLSPA-TP 672
P + + RPAP Q+ SPS S+ P P+ + P SP + + +P
Sbjct: 68 PESPSGQVGPRPAP-PQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSP 126
Query: 673 SRKRSVAVSDEEEVEEEAERRKER-----CKRGRFVVKEEKKDS---NELSDSAGEEDSA 724
K+ V + E + ERR+ER K+ ++ KEEK + +L + +
Sbjct: 127 PTKQEVKKAGERH-KLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQ 185
Query: 725 DLKRAQKDKGLHVEVRVNRE 744
LK Q+ L R E
Sbjct: 186 RLKAEQRRAALEERQRQKLE 205
Score = 38.1 bits (87), Expect = 0.040
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 15/209 (7%)
Query: 543 EPVRRPQRPRSPPLPAVIRNAPSRPPSL-PTPRPASQPRKAPVISSTPK-----LPALAA 596
EP P+ SPP P + P PP P + A+ ++ P+ +P PA
Sbjct: 24 EPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAPPQ 83
Query: 597 REEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTP 656
E S+ + P P + +RP Q SP+ +P S SP P+ + +K
Sbjct: 84 EESPSSEAKSRGPTPP-----AMGPRDARPPRRSSQPSPTAVPASDSP---PTKQEVKKA 135
Query: 657 VVKKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVKEEKKDSNELSD 716
+ + + AV E+E + +A R K+ +R R ++E++ + +
Sbjct: 136 GERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRR-RLEEQRLKAEQRRA 194
Query: 717 SAGEEDSADLKRAQKDKGLHVEVRVNREW 745
+ E L++ ++ ++ V + W
Sbjct: 195 ALEERQRQKLEKNKERYEAAIQRSVKKTW 223
Score = 36.2 bits (82), Expect = 0.15
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 470 EQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQK---TTPIRSQA 526
E+D+ EQ + ++ + + ++++ EK + +QE+ E LQK RS+
Sbjct: 626 ERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSRE 685
Query: 527 DLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVIS 586
+ ++ LE +E R+ +R R L +++ +R + + ++A
Sbjct: 686 EAERQRLEREKHFQQQEQERQERRKR---LEEIMKR--TRKSEVSETKQKQDSKEANANG 740
Query: 587 STPK-LPALAAREEASTSRLLQPPE-APRKPANTLVKTASRPAPLVQQLSP 635
S+P+ + A+ AR +Q E P++P +L + PA LV L P
Sbjct: 741 SSPEPVKAVEARSPGLQKEAVQKEEPIPQEPQWSL-PSKELPASLVNGLQP 790
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 57.8 bits (138), Expect = 5e-08
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 36/185 (19%)
Query: 520 TPIRSQADLKKLPLEVTTRPS-----------TEEPVRRPQRPRSP-------PLPAVIR 561
T I+S K P TT+ + T+EP P P+ P P P +
Sbjct: 235 TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 292
Query: 562 NAPSRP-------PSLPTP----RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPE 610
+AP+ P P P P PA K P +TPK PA +E A T+ P
Sbjct: 293 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT-PTTPKEPAPTTKEPAPTTPKEPAPT 351
Query: 611 APRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKT-PVVKKTESP--IKL 667
AP+KPA T K + P + + P+ +P+E P+P K+ P K +P K
Sbjct: 352 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE-PAPTTTKSAPTTTKEPAPTTTKS 410
Query: 668 SPATP 672
+P TP
Sbjct: 411 APTTP 415
Score = 56.2 bits (134), Expect = 1e-07
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 24/201 (11%)
Query: 493 KTQEEKQKQLTEKIRQQQ--EKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQR 550
KT K+ Q EK + + L K TP +++ K L P+ P
Sbjct: 169 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTP-KAETTTKGPALTTPKEPTPTTPKEPAST 227
Query: 551 PRSPPLPAVIRNAPSRPP--------SLPT----PRPASQPRKAPVISSTPKLPALAARE 598
P P I++AP+ P S PT P P + AP +TPK PA +
Sbjct: 228 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP---TTPKEPAPTTTK 284
Query: 599 EASTSRLLQPPEAPRKPANTLVK-----TASRPAPLVQQLSPSLLPNSKSP-REVPSPKV 652
E + + P P++PA T K T PAP + P +P + P+P
Sbjct: 285 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 344
Query: 653 IKTPVVKKTESPIKLSPATPS 673
K P + P +P P+
Sbjct: 345 PKEPAPTAPKKPAPTTPKEPA 365
Score = 51.6 bits (122), Expect = 4e-06
Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTR---PSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------P 568
TTP K P T + P+T+EP P P+ P A + AP+ P P
Sbjct: 312 TTPKEPAPTTPKEPTPTTPKEPAPTTKEPA--PTTPKEPAPTAPKKPAPTTPKEPAPTTP 369
Query: 569 SLPTPRPASQPR----KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTAS 624
P P +P K P ++T P +T++ P P++P+ T T
Sbjct: 370 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK--SAPTTPKEPSPT---TTK 424
Query: 625 RPAPLVQQLSPSLLPNSKSPR--EVPSPKVIKTPVVKKTESPIKLSPATPS 673
PAP + P +P + P+P K P T+ P +P P+
Sbjct: 425 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 475
Score = 49.7 bits (117), Expect = 1e-05
Identities = 53/221 (23%), Positives = 76/221 (34%), Gaps = 23/221 (10%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TT +
Sbjct: 231 EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT 290
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPTPRPASQPRKAPVI 585
K P T P P+ P P+ P P+ T PA K P
Sbjct: 291 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA- 349
Query: 586 SSTPKLPALAA---------REEASTSRLLQPPEAPRKPANTLVK----TASRPAPLVQQ 632
+ PK PA +E A T+ P P++PA T K T PAP +
Sbjct: 350 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 409
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
+P+ +P+E PSP K P + P +P P+
Sbjct: 410 SAPT------TPKE-PSPTTTKEPAPTTPKEPAPTTPKKPA 443
Score = 49.3 bits (116), Expect = 2e-05
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 13/160 (8%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPT---P 573
TTP K P T + + P P ++AP+ P PS T P
Sbjct: 367 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 426
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQ 632
P + AP +TPK PA +E + + +P P +KPA T T PAP +
Sbjct: 427 APTTPKEPAP---TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT---TPKEPAPTTPK 480
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
+ P +P P TP +P +L+P TP
Sbjct: 481 ETAPTTPKKLTP-TTPEKLAPTTPEKPAPTTPEELAPTTP 519
Score = 47.0 bits (110), Expect = 9e-05
Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TTP +
Sbjct: 387 EPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP-TTPKKPAPT 445
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISS 587
K P T + ++P P +P PA + P + P + + AP +
Sbjct: 446 TPKEPAPTTPKEPAPTTTKKPA-PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP---T 501
Query: 588 TPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
TP+ PA EE + + +P P P +PA T K A+ P + P +P+E
Sbjct: 502 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 561
Query: 647 VPSPKVIK--TPVVKKTESPIKL---SPATPSR 674
P+P K P K +P L +P TP +
Sbjct: 562 -PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK 593
Score = 44.3 bits (103), Expect = 6e-04
Identities = 51/214 (23%), Positives = 73/214 (34%), Gaps = 17/214 (7%)
Query: 475 EASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLE 534
E + K P T K+ K+ T + E L TTP + P E
Sbjct: 457 EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP---EKPAPTTPEE 513
Query: 535 VTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPAL 594
+ E P+ P A N P P PA K P +TPK A
Sbjct: 514 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA-PTTPKETAP 572
Query: 595 AAREEASTSRLLQP-PEAPRKP-----ANTLVK-----TASRPAPLVQQLSPSLLPNSKS 643
+ + + L +P P P+KP A T K T +PAP + + P +
Sbjct: 573 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 632
Query: 644 PR--EVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
P + P+P K + P +P P+ K
Sbjct: 633 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 666
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 21/164 (12%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPV----------I 585
TT T + P +P PA + P +L P P + + AP
Sbjct: 618 TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPT 677
Query: 586 SSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNS--- 641
S+T PA +E + + +P P P+KPA T T P P ++S
Sbjct: 678 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPT---TPETPPPTTSEVSTPTTTKEPTT 734
Query: 642 --KSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDE 683
KSP E +P++ P K E+ K P P+ K A E
Sbjct: 735 IHKSPDE-STPELSAEPTPKALENSPK-EPGVPTTKTPAATKPE 776
Score = 38.5 bits (88), Expect = 0.031
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 24/120 (20%)
Query: 571 PTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQP--------PEAPRKPANTLVKT 622
PTP+ A K P ++ TPK P +E +++ +P P P++PA T K+
Sbjct: 197 PTPK-AETTTKGPALT-TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 254
Query: 623 A----SRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTES----PIKLSPATPSR 674
A PAP + + P +P+E P+P K P T+S P + +P TP +
Sbjct: 255 APTTPKEPAP-----TTTKEPAPTTPKE-PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKK 308
Score = 38.1 bits (87), Expect = 0.040
Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 18/226 (7%)
Query: 519 TTPIRSQADLKKLPLEVT--TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL---PTP 573
TTP K P T T P T V P + P + ++ P L PTP
Sbjct: 695 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPT--TIHKSPDESTPELSAEPTP 752
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQL 633
+ K P + +T K PA E +T++ + + T +T + + ++
Sbjct: 753 KALENSPKEPGVPTT-KTPAATKPEMTTTAK----DKTTERDLRTTPETTTAAPKMTKET 807
Query: 634 SPSLLPNSKSPREVPSPKVIKTPVVKKTESPIK------LSPATPSRKRSVAVSDEEEVE 687
+ + ++S + +V T T I L+P + K+++ ++
Sbjct: 808 ATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKP 867
Query: 688 EEAERRKERCKRGRFVVKEEKKDSNELSDSAGEEDSADLKRAQKDK 733
EE + K+R + + +K + + + R +K K
Sbjct: 868 EETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPK 913
Score = 37.0 bits (84), Expect = 0.090
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 32/220 (14%)
Query: 458 PDTWVCSMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQ 517
PD ++ +P E S ++ VP KT + ++T A
Sbjct: 739 PDESTPELSAEPTPKALENSPKEPGVPT------TKTPAATKPEMTTT---------AKD 783
Query: 518 KTTPIRSQADLKKLPLEVTTRPS-TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPA 576
KTT + DL+ P T P T+E ++ + A S T
Sbjct: 784 KTT----ERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTS------TTTQD 833
Query: 577 SQPRKAPVISSTPKLPALAAREEA-STSRLLQPPEAPRKPANTLVKT-ASRPAPLVQQLS 634
+ P K + +T P + ++ +T+ ++ PE KP + + A+ P P +
Sbjct: 834 TTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKA 893
Query: 635 PSLLPNSKSPREVP---SPKVIKTPVVKKTESPIKLSPAT 671
P ++K P+ +P PK TP K T + +L+P +
Sbjct: 894 PKKPTSTKKPKTMPRVRKPKTTPTP-RKMTSTMPELNPTS 932
Score = 32.7 bits (73), Expect = 1.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
TT I ++ + P + T P +PQ+P P P P + P+
Sbjct: 860 TTEIMNKPEETAKPKDRATNSKATTP--KPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPT 917
Query: 579 PRKAPVISSTPKLPALAAREEASTSRLLQPPEAP 612
PRK + S+ P+L + EA +P + P
Sbjct: 918 PRK--MTSTMPELNPTSRIAEAMLQTTTRPNQTP 949
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 57.8 bits (138), Expect = 5e-08
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 36/185 (19%)
Query: 520 TPIRSQADLKKLPLEVTTRPS-----------TEEPVRRPQRPRSP-------PLPAVIR 561
T I+S K P TT+ + T+EP P P+ P P P +
Sbjct: 276 TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 333
Query: 562 NAPSRP-------PSLPTP----RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPE 610
+AP+ P P P P PA K P +TPK PA +E A T+ P
Sbjct: 334 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT-PTTPKEPAPTTKEPAPTTPKEPAPT 392
Query: 611 APRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKT-PVVKKTESP--IKL 667
AP+KPA T K + P + + P+ +P+E P+P K+ P K +P K
Sbjct: 393 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE-PAPTTTKSAPTTTKEPAPTTTKS 451
Query: 668 SPATP 672
+P TP
Sbjct: 452 APTTP 456
Score = 56.2 bits (134), Expect = 1e-07
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 24/201 (11%)
Query: 493 KTQEEKQKQLTEKIRQQQ--EKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQR 550
KT K+ Q EK + + L K TP +++ K L P+ P
Sbjct: 210 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTP-KAETTTKGPALTTPKEPTPTTPKEPAST 268
Query: 551 PRSPPLPAVIRNAPSRPP--------SLPT----PRPASQPRKAPVISSTPKLPALAARE 598
P P I++AP+ P S PT P P + AP +TPK PA +
Sbjct: 269 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP---TTPKEPAPTTTK 325
Query: 599 EASTSRLLQPPEAPRKPANTLVK-----TASRPAPLVQQLSPSLLPNSKSP-REVPSPKV 652
E + + P P++PA T K T PAP + P +P + P+P
Sbjct: 326 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Query: 653 IKTPVVKKTESPIKLSPATPS 673
K P + P +P P+
Sbjct: 386 PKEPAPTAPKKPAPTTPKEPA 406
Score = 51.6 bits (122), Expect = 4e-06
Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTR---PSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------P 568
TTP K P T + P+T+EP P P+ P A + AP+ P P
Sbjct: 353 TTPKEPAPTTPKEPTPTTPKEPAPTTKEPA--PTTPKEPAPTAPKKPAPTTPKEPAPTTP 410
Query: 569 SLPTPRPASQPR----KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTAS 624
P P +P K P ++T P +T++ P P++P+ T T
Sbjct: 411 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK--SAPTTPKEPSPT---TTK 465
Query: 625 RPAPLVQQLSPSLLPNSKSPR--EVPSPKVIKTPVVKKTESPIKLSPATPS 673
PAP + P +P + P+P K P T+ P +P P+
Sbjct: 466 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 516
Score = 49.7 bits (117), Expect = 1e-05
Identities = 53/221 (23%), Positives = 76/221 (34%), Gaps = 23/221 (10%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TT +
Sbjct: 272 EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT 331
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPTPRPASQPRKAPVI 585
K P T P P+ P P+ P P+ T PA K P
Sbjct: 332 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA- 390
Query: 586 SSTPKLPALAA---------REEASTSRLLQPPEAPRKPANTLVK----TASRPAPLVQQ 632
+ PK PA +E A T+ P P++PA T K T PAP +
Sbjct: 391 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 450
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
+P+ +P+E PSP K P + P +P P+
Sbjct: 451 SAPT------TPKE-PSPTTTKEPAPTTPKEPAPTTPKKPA 484
Score = 49.3 bits (116), Expect = 2e-05
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 13/160 (8%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPT---P 573
TTP K P T + + P P ++AP+ P PS T P
Sbjct: 408 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 467
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQ 632
P + AP +TPK PA +E + + +P P +KPA T T PAP +
Sbjct: 468 APTTPKEPAP---TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT---TPKEPAPTTPK 521
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
+ P +P P TP +P +L+P TP
Sbjct: 522 ETAPTTPKKLTP-TTPEKLAPTTPEKPAPTTPEELAPTTP 560
Score = 47.0 bits (110), Expect = 9e-05
Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TTP +
Sbjct: 428 EPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP-TTPKKPAPT 486
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISS 587
K P T + ++P P +P PA + P + P + + AP +
Sbjct: 487 TPKEPAPTTPKEPAPTTTKKPA-PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP---T 542
Query: 588 TPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
TP+ PA EE + + +P P P +PA T K A+ P + P +P+E
Sbjct: 543 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 602
Query: 647 VPSPKVIK--TPVVKKTESPIKL---SPATPSR 674
P+P K P K +P L +P TP +
Sbjct: 603 -PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK 634
Score = 44.3 bits (103), Expect = 6e-04
Identities = 51/214 (23%), Positives = 73/214 (34%), Gaps = 17/214 (7%)
Query: 475 EASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLE 534
E + K P T K+ K+ T + E L TTP + P E
Sbjct: 498 EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP---EKPAPTTPEE 554
Query: 535 VTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPAL 594
+ E P+ P A N P P PA K P +TPK A
Sbjct: 555 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA-PTTPKETAP 613
Query: 595 AAREEASTSRLLQP-PEAPRKP-----ANTLVK-----TASRPAPLVQQLSPSLLPNSKS 643
+ + + L +P P P+KP A T K T +PAP + + P +
Sbjct: 614 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 673
Query: 644 PR--EVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
P + P+P K + P +P P+ K
Sbjct: 674 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 707
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 21/164 (12%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPV----------I 585
TT T + P +P PA + P +L P P + + AP
Sbjct: 659 TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPT 718
Query: 586 SSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNS--- 641
S+T PA +E + + +P P P+KPA T T P P ++S
Sbjct: 719 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPT---TPETPPPTTSEVSTPTTTKEPTT 775
Query: 642 --KSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDE 683
KSP E +P++ P K E+ K P P+ K A E
Sbjct: 776 IHKSPDE-STPELSAEPTPKALENSPK-EPGVPTTKTPAATKPE 817
Score = 38.5 bits (88), Expect = 0.031
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 24/120 (20%)
Query: 571 PTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQP--------PEAPRKPANTLVKT 622
PTP+ A K P ++ TPK P +E +++ +P P P++PA T K+
Sbjct: 238 PTPK-AETTTKGPALT-TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 295
Query: 623 A----SRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTES----PIKLSPATPSR 674
A PAP + + P +P+E P+P K P T+S P + +P TP +
Sbjct: 296 APTTPKEPAP-----TTTKEPAPTTPKE-PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKK 349
Score = 38.1 bits (87), Expect = 0.040
Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 18/226 (7%)
Query: 519 TTPIRSQADLKKLPLEVT--TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL---PTP 573
TTP K P T T P T V P + P + ++ P L PTP
Sbjct: 736 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPT--TIHKSPDESTPELSAEPTP 793
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQL 633
+ K P + +T K PA E +T++ + + T +T + + ++
Sbjct: 794 KALENSPKEPGVPTT-KTPAATKPEMTTTAK----DKTTERDLRTTPETTTAAPKMTKET 848
Query: 634 SPSLLPNSKSPREVPSPKVIKTPVVKKTESPIK------LSPATPSRKRSVAVSDEEEVE 687
+ + ++S + +V T T I L+P + K+++ ++
Sbjct: 849 ATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKP 908
Query: 688 EEAERRKERCKRGRFVVKEEKKDSNELSDSAGEEDSADLKRAQKDK 733
EE + K+R + + +K + + + R +K K
Sbjct: 909 EETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPK 954
Score = 37.0 bits (84), Expect = 0.090
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 32/220 (14%)
Query: 458 PDTWVCSMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQ 517
PD ++ +P E S ++ VP KT + ++T A
Sbjct: 780 PDESTPELSAEPTPKALENSPKEPGVPT------TKTPAATKPEMTTT---------AKD 824
Query: 518 KTTPIRSQADLKKLPLEVTTRPS-TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPA 576
KTT + DL+ P T P T+E ++ + A S T
Sbjct: 825 KTT----ERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTS------TTTQD 874
Query: 577 SQPRKAPVISSTPKLPALAAREEA-STSRLLQPPEAPRKPANTLVKT-ASRPAPLVQQLS 634
+ P K + +T P + ++ +T+ ++ PE KP + + A+ P P +
Sbjct: 875 TTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKA 934
Query: 635 PSLLPNSKSPREVP---SPKVIKTPVVKKTESPIKLSPAT 671
P ++K P+ +P PK TP K T + +L+P +
Sbjct: 935 PKKPTSTKKPKTMPRVRKPKTTPTP-RKMTSTMPELNPTS 973
Score = 32.7 bits (73), Expect = 1.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
TT I ++ + P + T P +PQ+P P P P + P+
Sbjct: 901 TTEIMNKPEETAKPKDRATNSKATTP--KPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPT 958
Query: 579 PRKAPVISSTPKLPALAAREEASTSRLLQPPEAP 612
PRK + S+ P+L + EA +P + P
Sbjct: 959 PRK--MTSTMPELNPTSRIAEAMLQTTTRPNQTP 990
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 57.8 bits (138), Expect = 5e-08
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 36/185 (19%)
Query: 520 TPIRSQADLKKLPLEVTTRPS-----------TEEPVRRPQRPRSP-------PLPAVIR 561
T I+S K P TT+ + T+EP P P+ P P P +
Sbjct: 328 TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 385
Query: 562 NAPSRP-------PSLPTP----RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPE 610
+AP+ P P P P PA K P +TPK PA +E A T+ P
Sbjct: 386 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT-PTTPKEPAPTTKEPAPTTPKEPAPT 444
Query: 611 APRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKT-PVVKKTESP--IKL 667
AP+KPA T K + P + + P+ +P+E P+P K+ P K +P K
Sbjct: 445 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE-PAPTTTKSAPTTTKEPAPTTTKS 503
Query: 668 SPATP 672
+P TP
Sbjct: 504 APTTP 508
Score = 56.2 bits (134), Expect = 1e-07
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 24/201 (11%)
Query: 493 KTQEEKQKQLTEKIRQQQ--EKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQR 550
KT K+ Q EK + + L K TP +++ K L P+ P
Sbjct: 262 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTP-KAETTTKGPALTTPKEPTPTTPKEPAST 320
Query: 551 PRSPPLPAVIRNAPSRPP--------SLPT----PRPASQPRKAPVISSTPKLPALAARE 598
P P I++AP+ P S PT P P + AP +TPK PA +
Sbjct: 321 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP---TTPKEPAPTTTK 377
Query: 599 EASTSRLLQPPEAPRKPANTLVK-----TASRPAPLVQQLSPSLLPNSKSP-REVPSPKV 652
E + + P P++PA T K T PAP + P +P + P+P
Sbjct: 378 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Query: 653 IKTPVVKKTESPIKLSPATPS 673
K P + P +P P+
Sbjct: 438 PKEPAPTAPKKPAPTTPKEPA 458
Score = 51.6 bits (122), Expect = 4e-06
Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTR---PSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------P 568
TTP K P T + P+T+EP P P+ P A + AP+ P P
Sbjct: 405 TTPKEPAPTTPKEPTPTTPKEPAPTTKEPA--PTTPKEPAPTAPKKPAPTTPKEPAPTTP 462
Query: 569 SLPTPRPASQPR----KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTAS 624
P P +P K P ++T P +T++ P P++P+ T T
Sbjct: 463 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK--SAPTTPKEPSPT---TTK 517
Query: 625 RPAPLVQQLSPSLLPNSKSPR--EVPSPKVIKTPVVKKTESPIKLSPATPS 673
PAP + P +P + P+P K P T+ P +P P+
Sbjct: 518 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 568
Score = 49.7 bits (117), Expect = 1e-05
Identities = 53/221 (23%), Positives = 76/221 (34%), Gaps = 23/221 (10%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TT +
Sbjct: 324 EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT 383
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPTPRPASQPRKAPVI 585
K P T P P+ P P+ P P+ T PA K P
Sbjct: 384 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA- 442
Query: 586 SSTPKLPALAA---------REEASTSRLLQPPEAPRKPANTLVK----TASRPAPLVQQ 632
+ PK PA +E A T+ P P++PA T K T PAP +
Sbjct: 443 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 502
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
+P+ +P+E PSP K P + P +P P+
Sbjct: 503 SAPT------TPKE-PSPTTTKEPAPTTPKEPAPTTPKKPA 536
Score = 49.3 bits (116), Expect = 2e-05
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 13/160 (8%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPT---P 573
TTP K P T + + P P ++AP+ P PS T P
Sbjct: 460 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 519
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQ 632
P + AP +TPK PA +E + + +P P +KPA T T PAP +
Sbjct: 520 APTTPKEPAP---TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT---TPKEPAPTTPK 573
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
+ P +P P TP +P +L+P TP
Sbjct: 574 ETAPTTPKKLTP-TTPEKLAPTTPEKPAPTTPEELAPTTP 612
Score = 47.0 bits (110), Expect = 9e-05
Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TTP +
Sbjct: 480 EPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP-TTPKKPAPT 538
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISS 587
K P T + ++P P +P PA + P + P + + AP +
Sbjct: 539 TPKEPAPTTPKEPAPTTTKKPA-PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP---T 594
Query: 588 TPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
TP+ PA EE + + +P P P +PA T K A+ P + P +P+E
Sbjct: 595 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 654
Query: 647 VPSPKVIK--TPVVKKTESPIKL---SPATPSR 674
P+P K P K +P L +P TP +
Sbjct: 655 -PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK 686
Score = 44.3 bits (103), Expect = 6e-04
Identities = 51/214 (23%), Positives = 73/214 (34%), Gaps = 17/214 (7%)
Query: 475 EASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLE 534
E + K P T K+ K+ T + E L TTP + P E
Sbjct: 550 EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP---EKPAPTTPEE 606
Query: 535 VTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPAL 594
+ E P+ P A N P P PA K P +TPK A
Sbjct: 607 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA-PTTPKETAP 665
Query: 595 AAREEASTSRLLQP-PEAPRKP-----ANTLVK-----TASRPAPLVQQLSPSLLPNSKS 643
+ + + L +P P P+KP A T K T +PAP + + P +
Sbjct: 666 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 725
Query: 644 PR--EVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
P + P+P K + P +P P+ K
Sbjct: 726 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 759
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 21/164 (12%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPV----------I 585
TT T + P +P PA + P +L P P + + AP
Sbjct: 711 TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPT 770
Query: 586 SSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNS--- 641
S+T PA +E + + +P P P+KPA T T P P ++S
Sbjct: 771 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPT---TPETPPPTTSEVSTPTTTKEPTT 827
Query: 642 --KSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDE 683
KSP E +P++ P K E+ K P P+ K A E
Sbjct: 828 IHKSPDE-STPELSAEPTPKALENSPK-EPGVPTTKTPAATKPE 869
Score = 38.5 bits (88), Expect = 0.031
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 24/120 (20%)
Query: 571 PTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQP--------PEAPRKPANTLVKT 622
PTP+ A K P ++ TPK P +E +++ +P P P++PA T K+
Sbjct: 290 PTPK-AETTTKGPALT-TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 347
Query: 623 A----SRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTES----PIKLSPATPSR 674
A PAP + + P +P+E P+P K P T+S P + +P TP +
Sbjct: 348 APTTPKEPAP-----TTTKEPAPTTPKE-PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKK 401
Score = 38.1 bits (87), Expect = 0.040
Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 18/226 (7%)
Query: 519 TTPIRSQADLKKLPLEVT--TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL---PTP 573
TTP K P T T P T V P + P + ++ P L PTP
Sbjct: 788 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPT--TIHKSPDESTPELSAEPTP 845
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQL 633
+ K P + +T K PA E +T++ + + T +T + + ++
Sbjct: 846 KALENSPKEPGVPTT-KTPAATKPEMTTTAK----DKTTERDLRTTPETTTAAPKMTKET 900
Query: 634 SPSLLPNSKSPREVPSPKVIKTPVVKKTESPIK------LSPATPSRKRSVAVSDEEEVE 687
+ + ++S + +V T T I L+P + K+++ ++
Sbjct: 901 ATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKP 960
Query: 688 EEAERRKERCKRGRFVVKEEKKDSNELSDSAGEEDSADLKRAQKDK 733
EE + K+R + + +K + + + R +K K
Sbjct: 961 EETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPK 1006
Score = 37.0 bits (84), Expect = 0.090
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 32/220 (14%)
Query: 458 PDTWVCSMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQ 517
PD ++ +P E S ++ VP KT + ++T A
Sbjct: 832 PDESTPELSAEPTPKALENSPKEPGVPT------TKTPAATKPEMTTT---------AKD 876
Query: 518 KTTPIRSQADLKKLPLEVTTRPS-TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPA 576
KTT + DL+ P T P T+E ++ + A S T
Sbjct: 877 KTT----ERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTS------TTTQD 926
Query: 577 SQPRKAPVISSTPKLPALAAREEA-STSRLLQPPEAPRKPANTLVKT-ASRPAPLVQQLS 634
+ P K + +T P + ++ +T+ ++ PE KP + + A+ P P +
Sbjct: 927 TTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKA 986
Query: 635 PSLLPNSKSPREVP---SPKVIKTPVVKKTESPIKLSPAT 671
P ++K P+ +P PK TP K T + +L+P +
Sbjct: 987 PKKPTSTKKPKTMPRVRKPKTTPTP-RKMTSTMPELNPTS 1025
Score = 32.7 bits (73), Expect = 1.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
TT I ++ + P + T P +PQ+P P P P + P+
Sbjct: 953 TTEIMNKPEETAKPKDRATNSKATTP--KPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPT 1010
Query: 579 PRKAPVISSTPKLPALAAREEASTSRLLQPPEAP 612
PRK + S+ P+L + EA +P + P
Sbjct: 1011 PRK--MTSTMPELNPTSRIAEAMLQTTTRPNQTP 1042
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 57.8 bits (138), Expect = 5e-08
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 36/185 (19%)
Query: 520 TPIRSQADLKKLPLEVTTRPS-----------TEEPVRRPQRPRSP-------PLPAVIR 561
T I+S K P TT+ + T+EP P P+ P P P +
Sbjct: 369 TTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 426
Query: 562 NAPSRP-------PSLPTP----RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPE 610
+AP+ P P P P PA K P +TPK PA +E A T+ P
Sbjct: 427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT-PTTPKEPAPTTKEPAPTTPKEPAPT 485
Query: 611 APRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKT-PVVKKTESP--IKL 667
AP+KPA T K + P + + P+ +P+E P+P K+ P K +P K
Sbjct: 486 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE-PAPTTTKSAPTTTKEPAPTTTKS 544
Query: 668 SPATP 672
+P TP
Sbjct: 545 APTTP 549
Score = 56.2 bits (134), Expect = 1e-07
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 24/201 (11%)
Query: 493 KTQEEKQKQLTEKIRQQQ--EKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQR 550
KT K+ Q EK + + L K TP +++ K L P+ P
Sbjct: 303 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTP-KAETTTKGPALTTPKEPTPTTPKEPAST 361
Query: 551 PRSPPLPAVIRNAPSRPP--------SLPT----PRPASQPRKAPVISSTPKLPALAARE 598
P P I++AP+ P S PT P P + AP +TPK PA +
Sbjct: 362 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP---TTPKEPAPTTTK 418
Query: 599 EASTSRLLQPPEAPRKPANTLVK-----TASRPAPLVQQLSPSLLPNSKSP-REVPSPKV 652
E + + P P++PA T K T PAP + P +P + P+P
Sbjct: 419 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Query: 653 IKTPVVKKTESPIKLSPATPS 673
K P + P +P P+
Sbjct: 479 PKEPAPTAPKKPAPTTPKEPA 499
Score = 51.6 bits (122), Expect = 4e-06
Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTR---PSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------P 568
TTP K P T + P+T+EP P P+ P A + AP+ P P
Sbjct: 446 TTPKEPAPTTPKEPTPTTPKEPAPTTKEPA--PTTPKEPAPTAPKKPAPTTPKEPAPTTP 503
Query: 569 SLPTPRPASQPR----KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTAS 624
P P +P K P ++T P +T++ P P++P+ T T
Sbjct: 504 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK--SAPTTPKEPSPT---TTK 558
Query: 625 RPAPLVQQLSPSLLPNSKSPR--EVPSPKVIKTPVVKKTESPIKLSPATPS 673
PAP + P +P + P+P K P T+ P +P P+
Sbjct: 559 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 609
Score = 49.7 bits (117), Expect = 1e-05
Identities = 53/221 (23%), Positives = 76/221 (34%), Gaps = 23/221 (10%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TT +
Sbjct: 365 EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT 424
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPTPRPASQPRKAPVI 585
K P T P P+ P P+ P P+ T PA K P
Sbjct: 425 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA- 483
Query: 586 SSTPKLPALAA---------REEASTSRLLQPPEAPRKPANTLVK----TASRPAPLVQQ 632
+ PK PA +E A T+ P P++PA T K T PAP +
Sbjct: 484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
+P+ +P+E PSP K P + P +P P+
Sbjct: 544 SAPT------TPKE-PSPTTTKEPAPTTPKEPAPTTPKKPA 577
Score = 49.3 bits (116), Expect = 2e-05
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 13/160 (8%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP--PSLPT---P 573
TTP K P T + + P P ++AP+ P PS T P
Sbjct: 501 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 560
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQ 632
P + AP +TPK PA +E + + +P P +KPA T T PAP +
Sbjct: 561 APTTPKEPAP---TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT---TPKEPAPTTPK 614
Query: 633 LSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
+ P +P P TP +P +L+P TP
Sbjct: 615 ETAPTTPKKLTP-TTPEKLAPTTPEKPAPTTPEELAPTTP 653
Score = 47.0 bits (110), Expect = 9e-05
Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P +++ K P T K T ++ T K E TTP +
Sbjct: 521 EPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP-TTPKKPAPT 579
Query: 528 LKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISS 587
K P T + ++P P +P PA + P + P + + AP +
Sbjct: 580 TPKEPAPTTPKEPAPTTTKKPA-PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP---T 635
Query: 588 TPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
TP+ PA EE + + +P P P +PA T K A+ P + P +P+E
Sbjct: 636 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Query: 647 VPSPKVIK--TPVVKKTESPIKL---SPATPSR 674
P+P K P K +P L +P TP +
Sbjct: 696 -PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK 727
Score = 44.3 bits (103), Expect = 6e-04
Identities = 51/214 (23%), Positives = 73/214 (34%), Gaps = 17/214 (7%)
Query: 475 EASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLE 534
E + K P T K+ K+ T + E L TTP + P E
Sbjct: 591 EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP---EKPAPTTPEE 647
Query: 535 VTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPAL 594
+ E P+ P A N P P PA K P +TPK A
Sbjct: 648 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA-PTTPKETAP 706
Query: 595 AAREEASTSRLLQP-PEAPRKP-----ANTLVK-----TASRPAPLVQQLSPSLLPNSKS 643
+ + + L +P P P+KP A T K T +PAP + + P +
Sbjct: 707 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 766
Query: 644 PR--EVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
P + P+P K + P +P P+ K
Sbjct: 767 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 800
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 21/164 (12%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPV----------I 585
TT T + P +P PA + P +L P P + + AP
Sbjct: 752 TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPT 811
Query: 586 SSTPKLPALAAREEASTSRLLQP-PEAPRKPANTLVKTASRPAPLVQQLSPSLLPNS--- 641
S+T PA +E + + +P P P+KPA T T P P ++S
Sbjct: 812 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPT---TPETPPPTTSEVSTPTTTKEPTT 868
Query: 642 --KSPREVPSPKVIKTPVVKKTESPIKLSPATPSRKRSVAVSDE 683
KSP E +P++ P K E+ K P P+ K A E
Sbjct: 869 IHKSPDE-STPELSAEPTPKALENSPK-EPGVPTTKTPAATKPE 910
Score = 38.5 bits (88), Expect = 0.031
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 24/120 (20%)
Query: 571 PTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQP--------PEAPRKPANTLVKT 622
PTP+ A K P ++ TPK P +E +++ +P P P++PA T K+
Sbjct: 331 PTPK-AETTTKGPALT-TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 388
Query: 623 A----SRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTES----PIKLSPATPSR 674
A PAP + + P +P+E P+P K P T+S P + +P TP +
Sbjct: 389 APTTPKEPAP-----TTTKEPAPTTPKE-PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKK 442
Score = 38.1 bits (87), Expect = 0.040
Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 18/226 (7%)
Query: 519 TTPIRSQADLKKLPLEVT--TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL---PTP 573
TTP K P T T P T V P + P + ++ P L PTP
Sbjct: 829 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPT--TIHKSPDESTPELSAEPTP 886
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQL 633
+ K P + +T K PA E +T++ + + T +T + + ++
Sbjct: 887 KALENSPKEPGVPTT-KTPAATKPEMTTTAK----DKTTERDLRTTPETTTAAPKMTKET 941
Query: 634 SPSLLPNSKSPREVPSPKVIKTPVVKKTESPIK------LSPATPSRKRSVAVSDEEEVE 687
+ + ++S + +V T T I L+P + K+++ ++
Sbjct: 942 ATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKP 1001
Query: 688 EEAERRKERCKRGRFVVKEEKKDSNELSDSAGEEDSADLKRAQKDK 733
EE + K+R + + +K + + + R +K K
Sbjct: 1002 EETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPK 1047
Score = 37.0 bits (84), Expect = 0.090
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 32/220 (14%)
Query: 458 PDTWVCSMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQ 517
PD ++ +P E S ++ VP KT + ++T A
Sbjct: 873 PDESTPELSAEPTPKALENSPKEPGVPT------TKTPAATKPEMTTT---------AKD 917
Query: 518 KTTPIRSQADLKKLPLEVTTRPS-TEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPA 576
KTT + DL+ P T P T+E ++ + A S T
Sbjct: 918 KTT----ERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTS------TTTQD 967
Query: 577 SQPRKAPVISSTPKLPALAAREEA-STSRLLQPPEAPRKPANTLVKT-ASRPAPLVQQLS 634
+ P K + +T P + ++ +T+ ++ PE KP + + A+ P P +
Sbjct: 968 TTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKA 1027
Query: 635 PSLLPNSKSPREVP---SPKVIKTPVVKKTESPIKLSPAT 671
P ++K P+ +P PK TP K T + +L+P +
Sbjct: 1028 PKKPTSTKKPKTMPRVRKPKTTPTP-RKMTSTMPELNPTS 1066
Score = 32.7 bits (73), Expect = 1.7
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
TT I ++ + P + T P +PQ+P P P P + P+
Sbjct: 994 TTEIMNKPEETAKPKDRATNSKATTP--KPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPT 1051
Query: 579 PRKAPVISSTPKLPALAAREEASTSRLLQPPEAP 612
PRK + S+ P+L + EA +P + P
Sbjct: 1052 PRK--MTSTMPELNPTSRIAEAMLQTTTRPNQTP 1083
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 51.6 bits (122), Expect = 4e-06
Identities = 77/344 (22%), Positives = 129/344 (37%), Gaps = 28/344 (8%)
Query: 489 RKDMKTQEEKQKQLTEKIRQQQEK----LEALQKTTPIRS-QADLKKLPLEVTTRPSTEE 543
++ + +EE+++ E+ R+Q++K L L T P+ + + LPL P
Sbjct: 18 QQQQRAREEQERLRLEQEREQEQKKANSLARLAHTLPVEEPRMEAPPLPLSPPAPPPAPP 77
Query: 544 PVRRPQRPRSP-PLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEAS- 601
P P + P+P V + PP P P A AP + P L+ +E A
Sbjct: 78 PPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPALVGAPGLSIKEPAPL 137
Query: 602 TSRLLQPPEAPRKP-ANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKK 660
SR P AP P + + P PL +P L + +P P++
Sbjct: 138 PSRPQVPTPAPLLPDSKATIPPNGSPKPLQPLPTPVL---TIAPHPGVQPQLAPQQPPPP 194
Query: 661 TESPIKLSPA-----TPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVK------EEKK 709
T +KL+PA + +KR + E + + R+ K +K ++KK
Sbjct: 195 TLGTLKLAPAEEVKSSEQKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNVDDKK 254
Query: 710 DSNELSDSAGEEDSADLKRAQKDKGLHVEVRVNREWYTGRVTAVEVGKHVVRWKVKFDYV 769
SN LKR +K+ +E R+ RE + E+ + +W D +
Sbjct: 255 TSNLSVLRTALRYIQSLKRKEKEYEHEME-RLAREKIATQQRLAELKHELSQW---MDVL 310
Query: 770 PTDTTPRDRWVEKGSEDVRLMKPPSPEHQSLDTQQEGGEEEVGP 813
D R + +D S ++D E +GP
Sbjct: 311 EIDRVLRQ--TGQPEDDQASTSTASEGEDNIDEDMEEDRAGLGP 352
Score = 31.6 bits (70), Expect = 3.8
Identities = 46/219 (21%), Positives = 74/219 (33%), Gaps = 40/219 (18%)
Query: 489 RKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRR- 547
RK+ + + E ++ EKI QQ E + + ++ ++ L T +P ++
Sbjct: 273 RKEKEYEHEMERLAREKIATQQRLAELKHELSQWMDVLEIDRV-LRQTGQPEDDQASTST 331
Query: 548 --------------------PQRPRSPPLPAVIRNAPSRPPSLPTPRPAS-QPRKAPVIS 586
P + P P ++++ P + P P P P V
Sbjct: 332 ASEGEDNIDEDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPPHPHPHPHSVAL 391
Query: 587 STPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLS------------ 634
LP + + T L PP P PA TLV PA LV
Sbjct: 392 PPAHLPVQQQQPQQKTP-LPAPPPPPAAPAQTLVPA---PAHLVATAGGGSTVIAHTATT 447
Query: 635 -PSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
S++ + P K I ++L+PATP
Sbjct: 448 HASVIQTVNHVLQGPGGKHIAHIAPSAPSPAVQLAPATP 486
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 51.2 bits (121), Expect = 5e-06
Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 33/215 (15%)
Query: 456 DYPDTWVCSMNPDPEQDRCEASEQKQK-----VPLGTFRKDMKTQEEKQKQLTEKIRQQQ 510
DYPD P +D EA Q++K + L R + +EE+++ E+
Sbjct: 428 DYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACA 487
Query: 511 EKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL 570
EKL+ L + + A K+L E P+ P P PP AP PP
Sbjct: 488 EKLKRLDE----KFGAPDKRLKAEPAAPPAA------PSTPAPPPAVPKELPAPPAPPPA 537
Query: 571 PTPRPASQPR---KAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPA 627
P P ++P +AP STP P +AA P + + + S A
Sbjct: 538 SAPTPETEPEEPAQAPPAQSTP-TPGVAA----------APTLVSGGGSTSSTSSGSFEA 586
Query: 628 PLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTE 662
V+ PS + P EVP P TP V K E
Sbjct: 587 SPVEPQLPS-KEGPEPPEEVPPP---TTPPVPKVE 617
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 50.8 bits (120), Expect = 6e-06
Identities = 84/367 (22%), Positives = 139/367 (37%), Gaps = 66/367 (17%)
Query: 488 FRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRR 547
F ++ + +EE++++ E + E+LE L++ + A L P V T P+ P+
Sbjct: 27 FVREPEDEEEEEEEEEEDEDEDLEELEVLER----KPAAGLSAAP--VPTAPAAGAPLMD 80
Query: 548 PQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQ 607
PP P P+ PP P +P+ P +SST P+ + S S+L +
Sbjct: 81 FGNDFVPPAPR--GPLPAAPPVAPERQPSWDPSP---VSSTVPAPSPLSAAAVSPSKLPE 135
Query: 608 PPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKL 667
E P +P PA + Q P P + +P PS
Sbjct: 136 DDEPPARPP------PPPPASVSPQAEPVWTPPAPAPAAPPS------------------ 171
Query: 668 SPATPSRKRSVAVSDEEEVEEEAERRKE-RCKRGRFVVKEEKKDSNELSDSAGEED--SA 724
+PA P R+ S DE A R +KE+ ++ SAG+ED S
Sbjct: 172 TPAAPKRRGSSGSVDETLFALPAASEPVIRSSAENMDLKEQPGNTI----SAGQEDFPSV 227
Query: 725 DLKRAQKDKGLHV--EVRVNREWYTGRVTAVEVGKHVVRWKVKFDYVPTDTTPRDRWVEK 782
L+ A L Y G ++ V +PT+ T ++ V +
Sbjct: 228 LLETAASLPSLSPLSAASFKEHEYLGNLSTV---------------LPTEGTLQEN-VSE 271
Query: 783 GSEDVR------LMKPPSPEHQSLDTQQEGGEEEVGPVAQQAIAVAEPSTSECLRIEPDT 836
S++V L+ E L+ + G V P A+ A+ VA P ++ + +
Sbjct: 272 ASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVSPKAESAVIVANPREEIIVKNKDEE 331
Query: 837 TALSTNH 843
L +N+
Sbjct: 332 EKLVSNN 338
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 50.4 bits (119), Expect = 8e-06
Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 52/290 (17%)
Query: 468 DPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQAD 527
+P ++ KVP K E K+ + ++++EK +KT P RS++
Sbjct: 232 EPSVQEATSTSDILKVP-----KPEPIPEPKEPSPEKNSKKEKEK----EKTRP-RSRSR 281
Query: 528 LKKLPLEVTTRPSTEEPVRRPQR------PRSPPLPAVIRNAPSR--PPSLPTPRPASQP 579
K + PS P RR + PR P P R +P R PP P P +
Sbjct: 282 SKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRR-RPSPRRRTPPRRMPPPPRHRR 340
Query: 580 RKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLP 639
++PV +L+ +S+S + P P+KP K S P ++LSPS P
Sbjct: 341 SRSPVRRRRRSSASLSGSSSSSSSSRSRSP--PKKPP----KRTSSPPRKTRRLSPSASP 394
Query: 640 NSK----SPREVPSPKVIKTPVVKKT----ESPIKLSPATPSRK---------------- 675
+ SP P PK +P +++ +S + +SP S K
Sbjct: 395 PRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPA 454
Query: 676 ---RSVAVSDEEEVEEEAERRKERCKRGRFVVKEEKKDSNELSDSAGEED 722
R V +S+ EE + + ++ R ++ ++ S++ S+ ED
Sbjct: 455 PKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSED 504
Score = 45.4 bits (106), Expect = 3e-04
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 544 PVRRPQRPRS-PPLPAVIRNAPSRPPS-----LPTPRPASQP---RKAPVISSTPK---L 591
P P+R + PP P R +PS PP P P+ S P R++P +SS +
Sbjct: 606 PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS 665
Query: 592 PALAAREEAS--TSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPS-LLPNSKSPREVP 648
P+ + RE S ++ P PR P +T+S P P+ + S S S SP P
Sbjct: 666 PSRSTREARSPQPNKRHSPSPRPRAP-----QTSSSPPPVRRGASSSPQRRQSPSPSTRP 720
Query: 649 SPKVIKTP---VVKKTESPIKLSPATPSRKRSVAVSDE 683
+V +TP +KK SP S S RSV+ S E
Sbjct: 721 IRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPE 758
Score = 44.7 bits (104), Expect = 4e-04
Identities = 56/219 (25%), Positives = 80/219 (36%), Gaps = 23/219 (10%)
Query: 466 NPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQ 525
N D +S + + P R +K E +++ R QK T R +
Sbjct: 489 NQQSSSDSGSSSSSEDERPK---RSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGR 545
Query: 526 ADLKKLPLEVTTR--PSTEEPVRRPQRPRSPPLPAVIRNAPSRPP--SLPTPRPASQPRK 581
P R PS P RR + P PP R PS PP P+PR S P +
Sbjct: 546 RRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR----RRTPSPPPRRRSPSPRRYSPPIQ 601
Query: 582 APVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPN- 640
S +P A R P P++ + R +P+ ++ SPSL
Sbjct: 602 RR-YSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 641 ------SKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
S+S RE SP+ P + + SP +P T S
Sbjct: 661 RKGSSPSRSTREARSPQ----PNKRHSPSPRPRAPQTSS 695
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/139 (29%), Positives = 56/139 (40%), Gaps = 24/139 (17%)
Query: 538 RPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAR 597
R S P R +R SP P R P+ PP TP P + R S +P+ R
Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR-----SPSPR------R 595
Query: 598 EEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPV 657
R P P++ +TAS P P ++ SPS P + P PK +PV
Sbjct: 596 YSPPIQRRYSPSPPPKR------RTASPPPPPKRRASPSPPPKRRVSHS-PPPKQRSSPV 648
Query: 658 VKKTESPIKLSPATPSRKR 676
K+ SP+ S+ R
Sbjct: 649 TKRR------SPSLSSKHR 661
Score = 42.0 bits (97), Expect = 0.003
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 538 RPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTP---KLPAL 594
R S R PQ SPP V R A S P +P P+++P + +S TP K+
Sbjct: 681 RHSPSPRPRAPQTSSSPP--PVRRGASSSPQRRQSPSPSTRPIRR--VSRTPEPKKIKKA 736
Query: 595 AAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIK 654
A+ S R+ P K + P+P+ S+SP SP V
Sbjct: 737 ASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPV----------QSQSPSTNWSPAV-- 784
Query: 655 TPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERCKRGRFVVKEEKKDSNEL 714
VKK +SP SP+ P SD+E ++ +++K++ + K+ KK E
Sbjct: 785 --PVKKAKSPTP-SPSPPRN------SDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEK 835
Query: 715 SDSA 718
+ +A
Sbjct: 836 AVAA 839
Score = 37.7 bits (86), Expect = 0.053
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 51/264 (19%)
Query: 479 QKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTR 538
Q ++ L + +K + ++++ K+ E R+++E+ + ++ + P+ +
Sbjct: 135 QIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERK 194
Query: 539 PSTEEPVRRPQRPRSP-PLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAR 597
S R + RSP P P + P LP P + K+ + +
Sbjct: 195 RSHSRSPRHRTKSRSPSPAP----EKKEKTPELPEP--------------SVKVKEPSVQ 236
Query: 598 EEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVP-----SPKV 652
E STS +L+ P +P P+ + PS NSK +E S
Sbjct: 237 EATSTSDILKVP---------------KPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSR 281
Query: 653 IKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEV---EEEAERRK---------ERCKRG 700
K+ ++ SP P R RS + S + RR+ R +R
Sbjct: 282 SKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRS 341
Query: 701 RFVVKEEKKDSNELSDSAGEEDSA 724
R V+ ++ S LS S+ S+
Sbjct: 342 RSPVRRRRRSSASLSGSSSSSSSS 365
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 50.1 bits (118), Expect = 1e-05
Identities = 41/139 (29%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 554 PPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKLPALAAREEASTSRLLQPPEA 611
PPLP P PP++P P P +P P + P+ PAL + A T+ P E
Sbjct: 1147 PPLP------PEEPPTMP-PLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTEV 1199
Query: 612 PRKPANTLVKTASRPAPLVQQLSPSLLPNSKS-PREVPSPKVIKTPVVKKTESPIKLSPA 670
P P+ V P + PS +P S PS V + V P S
Sbjct: 1200 PSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASDPSVLVSEAAVTVPEPPPEPESSI 1259
Query: 671 TPSRKRSVAVSDEEEVEEE 689
T + S V++E EV E
Sbjct: 1260 TLTPVESAVVAEEHEVVPE 1278
Score = 47.0 bits (110), Expect = 9e-05
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 15/223 (6%)
Query: 464 SMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTE----KIRQQQEKLEALQKT 519
S+ DP + +K K +K K +E+K K+ E K + + L+
Sbjct: 94 SVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESD 153
Query: 520 TPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQP 579
+ ++ ++ + LE+ TR P + P P V+ S P L T +PA++
Sbjct: 154 SFLKFDSEPSAVALELPTRAFG--PSETNESPAVVLEPPVVSMEVSEPHILETLKPATKT 211
Query: 580 RKAPVIS----STPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPL--VQQL 633
+ V+S S ++A E S +++L A P TLV +S P V+
Sbjct: 212 AELSVVSTSVISEQSEQSVAVMPEPSMTKILDSFAAAPVPTTTLVLKSSEPVVTMSVEYQ 271
Query: 634 SPSLLPNSKSPREVPSPKVIKTPVVKKTESP---IKLSPATPS 673
S+L + +S PS ++ P V K P + +S TP+
Sbjct: 272 MKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPT 314
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 50.1 bits (118), Expect = 1e-05
Identities = 41/139 (29%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 554 PPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKLPALAAREEASTSRLLQPPEA 611
PPLP P PP++P P P +P P + P+ PAL + A T+ P E
Sbjct: 1147 PPLP------PEEPPTMP-PLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTEV 1199
Query: 612 PRKPANTLVKTASRPAPLVQQLSPSLLPNSKS-PREVPSPKVIKTPVVKKTESPIKLSPA 670
P P+ V P + PS +P S PS V + V P S
Sbjct: 1200 PSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASDPSVLVSEAAVTVPEPPPEPESSI 1259
Query: 671 TPSRKRSVAVSDEEEVEEE 689
T + S V++E EV E
Sbjct: 1260 TLTPVESAVVAEEHEVVPE 1278
Score = 47.0 bits (110), Expect = 9e-05
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 15/223 (6%)
Query: 464 SMNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTE----KIRQQQEKLEALQKT 519
S+ DP + +K K +K K +E+K K+ E K + + L+
Sbjct: 94 SVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESD 153
Query: 520 TPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQP 579
+ ++ ++ + LE+ TR P + P P V+ S P L T +PA++
Sbjct: 154 SFLKFDSEPSAVALELPTRAFG--PSETNESPAVVLEPPVVSMEVSEPHILETLKPATKT 211
Query: 580 RKAPVIS----STPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPL--VQQL 633
+ V+S S ++A E S +++L A P TLV +S P V+
Sbjct: 212 AELSVVSTSVISEQSEQSVAVMPEPSMTKILDSFAAAPVPTTTLVLKSSEPVVTMSVEYQ 271
Query: 634 SPSLLPNSKSPREVPSPKVIKTPVVKKTESP---IKLSPATPS 673
S+L + +S PS ++ P V K P + +S TP+
Sbjct: 272 MKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPT 314
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 49.7 bits (117), Expect = 1e-05
Identities = 39/164 (23%), Positives = 55/164 (33%), Gaps = 11/164 (6%)
Query: 519 TTPIRSQADLKKLPLEVTTRP-----STEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTP 573
TTPI A LP T P +T P P P + P+ P + P+P
Sbjct: 1505 TTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP 1564
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKT----ASRPAPL 629
P + P ++TP P + + PP P T T + P
Sbjct: 1565 PPTTTTTPPP--TTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPT 1622
Query: 630 VQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
++P + P PSP T T +P + TPS
Sbjct: 1623 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPS 1666
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/153 (24%), Positives = 55/153 (35%), Gaps = 14/153 (9%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAP-----SRPPSLPTPRPASQPRKAPVIS 586
P+ TT P P P P + P P +P + PP TP P + P S
Sbjct: 1457 PISTTTTPP---PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPAS 1513
Query: 587 STPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKS--- 643
+T P +T+ P P P T + + L +PS P + +
Sbjct: 1514 TTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1573
Query: 644 PREVPSPKVIKT---PVVKKTESPIKLSPATPS 673
P PSP T P + T P +P+ P+
Sbjct: 1574 PTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPT 1606
Score = 47.0 bits (110), Expect = 9e-05
Identities = 38/144 (26%), Positives = 50/144 (34%), Gaps = 7/144 (4%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLP---TPRPASQPRKAPVISST 588
P TT P T P SPP+ P+ PS P TP P + P ++T
Sbjct: 1645 PTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTT 1704
Query: 589 PKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVP 648
P P +ST+ PP P+ T T S P + L P+ S P
Sbjct: 1705 PSSPITTTTTPSSTTTPSPPPTTMTTPSPT--TTPSPPTTTMTTLPPT--TTSSPLTTTP 1760
Query: 649 SPKVIKTPVVKKTESPIKLSPATP 672
P I P + +P P
Sbjct: 1761 LPPSITPPTFSPFSTTTPTTPCVP 1784
Score = 45.4 bits (106), Expect = 3e-04
Identities = 45/163 (27%), Positives = 55/163 (33%), Gaps = 19/163 (11%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLP-----TP 573
TTP P TT P T P SPP P+ PS P TP
Sbjct: 1397 TTPSPPTTTPSPPPTSTTTLPPTTTP--------SPPTTTTTTPPPTTTPSPPITTTTTP 1448
Query: 574 RPASQPRKAPVISSTPKLPALAAREEAST--SRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
P + P +P IS+T P +T S P P T T + P
Sbjct: 1449 PPTTTP--SPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTT 1506
Query: 632 QLSPSLLPNSKSPREVPSP--KVIKTPVVKKTESPIKLSPATP 672
++P + P PSP TP T SP +P TP
Sbjct: 1507 PITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1549
Score = 45.4 bits (106), Expect = 3e-04
Identities = 41/165 (24%), Positives = 52/165 (31%), Gaps = 12/165 (7%)
Query: 519 TTPIRSQADLKKLPLEVTTRP-----STEEPVRRPQRPRSP-PLPAVIRNAPSRPPSLPT 572
TTPI LP T P +T P P P + P P I + PP T
Sbjct: 1544 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITT--TTPPPTTT 1601
Query: 573 PRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVK----TASRPAP 628
P P + P ++TP P +++ L P P P T T P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Query: 629 LVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
P + P PS + TP T TPS
Sbjct: 1662 TTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPS 1706
Score = 41.6 bits (96), Expect = 0.004
Identities = 38/135 (28%), Positives = 49/135 (36%), Gaps = 11/135 (8%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVI---RNAPSRPPSLPT-PRPASQPRKAPVISSTPKL 591
TT P T P P +PP PS PP+ T P P + P +P ++TP
Sbjct: 1610 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP--SPPTTTTPSP 1667
Query: 592 PALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPS-- 649
P T+ P P T T + P+P SP + S PS
Sbjct: 1668 PITTTTTPPPTTTPSSPITTTPSPPTT---TMTTPSPTTTPSSPITTTTTPSSTTTPSPP 1724
Query: 650 PKVIKTPVVKKTESP 664
P + TP T SP
Sbjct: 1725 PTTMTTPSPTTTPSP 1739
Score = 40.4 bits (93), Expect = 0.008
Identities = 39/151 (25%), Positives = 51/151 (33%), Gaps = 13/151 (8%)
Query: 532 PLEVTT---RPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLP---TPRPASQPRKAPVI 585
P TT P T P SPP P+ PS P TP P P
Sbjct: 1618 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP 1677
Query: 586 SSTPKLPALAAREEASTSRLL-QPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSP 644
++TP P +T+ P P P + T + P+ P + SP
Sbjct: 1678 TTTPSSPITTTPSPPTTTMTTPSPTTTPSSP----ITTTTTPSSTTTPSPPPTTMTTPSP 1733
Query: 645 REVPSP--KVIKTPVVKKTESPIKLSPATPS 673
PSP + T T SP+ +P PS
Sbjct: 1734 TTTPSPPTTTMTTLPPTTTSSPLTTTPLPPS 1764
Score = 37.7 bits (86), Expect = 0.053
Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 16/164 (9%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL-----PTP 573
TTPI + + P T+ T P+ P P + + P + PTP
Sbjct: 4129 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 4188
Query: 574 RPASQPRKAPVISSTPKLPALAARE---EASTSRLLQPPEAPRKPANTLVKTASRPAPLV 630
P P +ST + L E+ST + + +P + TL+ T P
Sbjct: 4189 TPTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLST----LPPA 4244
Query: 631 QQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSR 674
+++ + P++ + S +P T SP P TP+R
Sbjct: 4245 IEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSP----PGTPTR 4284
Score = 34.7 bits (78), Expect = 0.44
Identities = 38/171 (22%), Positives = 53/171 (30%), Gaps = 25/171 (14%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 4083 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 4142
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 4143 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 4193
Query: 632 QLSP---------SLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
Q P + L S P E +P+ ++ TES LS P+
Sbjct: 4194 QTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPA 4244
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 1898 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 1957
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 1958 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2008
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2009 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2043
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2013 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2072
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2073 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2123
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2124 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2158
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2128 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2187
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2188 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2238
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2239 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2273
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2243 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2302
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2303 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2353
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2354 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2388
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2358 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2417
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2418 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2468
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2469 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2503
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2473 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2532
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2533 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2583
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2584 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2618
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2588 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2647
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2648 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2698
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2699 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2733
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2703 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2762
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2763 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2813
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2814 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2848
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2818 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2877
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2878 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 2928
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 2929 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 2963
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 2933 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 2992
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 2993 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3043
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3044 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3078
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3048 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3107
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3108 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3158
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3159 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3193
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3163 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3222
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3223 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3273
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3274 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3308
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3278 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3337
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3338 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3388
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3389 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3423
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3393 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3452
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3453 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3503
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3504 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3538
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3508 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3567
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3568 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3618
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3619 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3653
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3623 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3682
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3683 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3733
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3734 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3768
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3738 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3797
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3798 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3848
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3849 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3883
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3853 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 3912
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 3913 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 3963
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 3964 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 3998
Score = 31.6 bits (70), Expect = 3.8
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP-------PSLP 571
TTPI + + P T+ T P+ P P + + P P
Sbjct: 3968 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP 4027
Query: 572 TPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
TP P P+ ++T P T Q P P T P P
Sbjct: 4028 TPTGTQTPTTTPITTTTTVTP-------TPTPTGTQTPTT--TPITTTTTVTPTPTPTGT 4078
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
Q +P+ P + + P+P TP +T + ++ T
Sbjct: 4079 Q-TPTTTPITTTTTVTPTP----TPTGTQTPTTTPITTTT 4113
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 49.3 bits (116), Expect = 2e-05
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 50/281 (17%)
Query: 494 TQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQ---R 550
T E++Q +L+ +++ Q+K T P + + P E +P T +P +PQ +
Sbjct: 2361 TGEQRQSKLSPQMQVHQDK------TLPPAQSSSVG--PAEA--QPQTAQPSAQPQPQTQ 2410
Query: 551 PRSPPLPAVIRNAPSRPPSLPTPRPASQ--PRKAPVISSTPKLPALAAREEASTSRLLQP 608
P+SP P V P + T S P +A + P +AA+ + ++ Q
Sbjct: 2411 PQSPAQPEV-----QTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQS 2465
Query: 609 PEAPRKPANTLVK-----------------TASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
P + P+ T ++ T S+P P +Q + +P+ P+ P
Sbjct: 2466 PVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQPIP-IQPHTSLQIPSQGQPQSQPQVV 2524
Query: 652 VIKTPVVKKTESPIKLSPATPSRKRSVAVSDE------EEVEEEAERRKERCKRGRFV-V 704
+ V++ + ++PA + + V ++ +++++E ++ ++ KR V
Sbjct: 2525 MKHNAVIEHLKQKKSMTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQ 2584
Query: 705 KEEKKDSNELSD---SAGEEDSADL--KRAQKDKGLHVEVR 740
K K+++ +LS E+ A++ KRA DK L +EV+
Sbjct: 2585 KRSKQNATKLSALLFKHKEQLRAEILKKRALLDKDLQIEVQ 2625
Score = 39.7 bits (91), Expect = 0.014
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 470 EQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLK 529
EQ R + + K L ++ ++ + K++ L +K Q E E L++ I+ + DL
Sbjct: 2583 EQKRSKQNATKLSALLFKHKEQLRAEILKKRALLDK-DLQIEVQEELKRDLKIKKEKDLM 2641
Query: 530 KLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTP 589
+L + V P P +P PA P PP P P PA Q + STP
Sbjct: 2642 QL--------AQATAVAAPCPPVTPAPPA-----PPAPPPSPPPPPAVQHTG---LLSTP 2685
Query: 590 KLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPL 629
LPA + + + + +K +T K + L
Sbjct: 2686 TLPAASQKRKREEEKDSSSKSKKKKMISTTSKETKKDTKL 2725
Score = 36.2 bits (82), Expect = 0.15
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 546 RRPQRPRSPPLPAVIRNAPSRPPSLPTP------------RPASQPRKAPVISSTPKLPA 593
RR + P+ P PA R AP+ PP P P R +S+ R A +
Sbjct: 4 RRGRPPKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTR 63
Query: 594 LAAREEASTSRLLQPPEAPRKPANT 618
L++ S+SR PP P P+ +
Sbjct: 64 LSSPRGGSSSRRKPPPPPPAPPSTS 88
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 48.9 bits (115), Expect = 2e-05
Identities = 55/222 (24%), Positives = 82/222 (36%), Gaps = 27/222 (12%)
Query: 473 RCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLP 532
R A++ QK+ K + T+ I+ QKT P S LP
Sbjct: 349 RPAAAQPSQKITATKIPKSLPTKPSAPSTSIVPIKSPHPT----QKTAP--SSFTKSALP 402
Query: 533 LEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPK-L 591
+ P++ R RP P+ R P +P P P S P SS+ K +
Sbjct: 403 TQKQVPPTSRPVPARVSRPAEKPI--------QRNPGMPRPPPPSTRPLPPTTSSSKKPI 454
Query: 592 PALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
P LA E TS +P A +T++ P LS S P S R P
Sbjct: 455 PTLARTEAKITSHASKPASA---------RTSTHKPPPFTALSSSPAPTPGSTRSTRPPA 505
Query: 652 VIKTPVVKKTESPIKLSPATPSRKRSVAVSDEEEVEEEAERR 693
+ P T +P + +PA P+ S ++ + EA ++
Sbjct: 506 TM-VPPTSGTSTP-RTAPAVPT-PGSAPTGSKKPIGSEASKK 544
Score = 42.7 bits (99), Expect = 0.002
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 536 TTRPSTEEPVRRPQRPRSP-PLPAVIRNAPSRPPS--LPTPRPASQPRKAPVISSTPKLP 592
+ R ST +P SP P P R+ +RPP+ +P S PR AP + + P
Sbjct: 473 SARTSTHKPPPFTALSSSPAPTPGSTRS--TRPPATMVPPTSGTSTPRTAPAVPTPGSAP 530
Query: 593 ALAAREEAS-TSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
+ + S S+ P +PRKP A+R PL L+ P P + +P
Sbjct: 531 TGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPL-SDLTTRPSPRQPQPSQQTTPA 589
Query: 652 VIKTPVVKKTESP 664
++ P + SP
Sbjct: 590 LVLAPAQFLSSSP 602
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 48.9 bits (115), Expect = 2e-05
Identities = 45/137 (32%), Positives = 57/137 (41%), Gaps = 30/137 (21%)
Query: 553 SPPLPAVIRNAPSRPPSLPT----------------PRPASQPRKAPVISSTPKLPALAA 596
SPPL V AP+ PPS+PT P PAS P PV S P L+
Sbjct: 249 SPPLAPVPALAPA-PPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSV 307
Query: 597 REEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTP 656
A L+Q P P P TLV A P P++ + S P + +P VP P
Sbjct: 308 PVSAPPLALIQAPVPPSAP--TLV-LAPVPTPVLAPMPASTPPAAPAPPSVPMP------ 358
Query: 657 VVKKTESPIKLSPATPS 673
T +P P+TP+
Sbjct: 359 ----TPTPSSGPPSTPT 371
Score = 40.8 bits (94), Expect = 0.006
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 531 LPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTP--------------RPA 576
LPL T P+ P P S +P + +A P S+P P PA
Sbjct: 189 LPLVTTNFSPLPAPIC-PPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPA 247
Query: 577 SQPRKAPVISSTPKLPALAAREEAS-----TSRLLQPPEAPRKPANTLVKTASRPAPLVQ 631
P APV + P P++ S ++ +L P A P+ + +A PAPL
Sbjct: 248 PSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSV 307
Query: 632 QLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLS--PATPS 673
+S L ++P +P ++ PV +P+ S PA P+
Sbjct: 308 PVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPA 351
Score = 39.3 bits (90), Expect = 0.018
Identities = 45/167 (26%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 531 LPLEVTTRPSTEEPVRRPQ---RPRSPPLPAVIRNA--------------PSRPPSLPTP 573
+P++V T P P P P +P +I ++ S PPS P P
Sbjct: 237 VPVQVATSVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVP 296
Query: 574 RPASQPRKAPVISSTPKLPALAAREEASTSRL-LQPPEAP---RKPANTLVKTASRPAPL 629
A P V S P L + A S L L P P PA+T + P+
Sbjct: 297 LSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVP 356
Query: 630 VQQLSPSLLPNSKS---PREVPSPKVIKTPVVKKTESPIKLSPATPS 673
+ +PS P S P P+P TP T +P + ATP+
Sbjct: 357 MPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPA 403
Score = 35.0 bits (79), Expect = 0.34
Identities = 30/114 (26%), Positives = 39/114 (34%), Gaps = 20/114 (17%)
Query: 548 PQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQ 607
P P P +P S PPS PT PA P P + P +
Sbjct: 347 PAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAP---------------IFT 391
Query: 608 PPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSP--REVP---SPKVIKTP 656
P P A S P P LS P +++P ++VP P + TP
Sbjct: 392 PAPTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTP 445
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 48.5 bits (114), Expect = 3e-05
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 19/187 (10%)
Query: 515 ALQKTTPIRSQADLKKLPL-EVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPS-LPT 572
A++ +TP + +P E T P+ P P+ P SP P+ P + +PT
Sbjct: 991 AVRVSTPEEPASPAAAVPTPEEPTSPAAAVPT--PEEPTSPAAAVPPPEEPTSPAAAVPT 1048
Query: 573 PRPASQPRKAPVISSTPKLPALAA---REEASTSRLLQPPEAPRKPANTLVKTASRPAPL 629
P + P A P PA A E S + + PE P PA A+ P P
Sbjct: 1049 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPA------AAVPTPE 1102
Query: 630 VQQLSPSLLPNSKSPRE----VPSPKVIKTP--VVKKTESPIKLSPATPSRKRSVAVSDE 683
+ +P + P VP+P+ +P V E P +PA P+ + S + +
Sbjct: 1103 EPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVA 1162
Query: 684 EEVEEEA 690
EE+
Sbjct: 1163 VPTPEES 1169
Score = 39.7 bits (91), Expect = 0.014
Identities = 49/194 (25%), Positives = 67/194 (34%), Gaps = 33/194 (17%)
Query: 467 PDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQA 526
P PE+ A+ +F + T EE A TP A
Sbjct: 1164 PTPEESASPAAAVPTPAESASFAAVVATLEEPTSP-------------AASVPTPAAMVA 1210
Query: 527 DLKKLPLEVTTRPSTEEP------VRRPQRPRSPPLPAVIRNAP-SRPPSLPTPRPASQP 579
L++ + P++EEP V P+ P SP P S ++ TP S P
Sbjct: 1211 TLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSP 1270
Query: 580 RKAPVISSTPKLPALAA---REEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPS 636
+ P PA A E AS + + PE PA AS P P V + +
Sbjct: 1271 AASVPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPA------ASVPTPEVPAIPAA 1324
Query: 637 LLPNSKSPREVPSP 650
+P P E SP
Sbjct: 1325 AVP----PMEEVSP 1334
Score = 35.0 bits (79), Expect = 0.34
Identities = 41/163 (25%), Positives = 58/163 (35%), Gaps = 30/163 (18%)
Query: 537 TRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPS----LPTPRPASQPRKAPVISSTPKLP 592
T P TEE P P PA +AP P + + TP + P A P P
Sbjct: 961 TVPITEED----GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSP 1016
Query: 593 ALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE----VP 648
A A + PE P PA A+ P P + +P + P VP
Sbjct: 1017 AAA----------VPTPEEPTSPA------AAVPPPEEPTSPAAAVPTPEEPTSPAAAVP 1060
Query: 649 SPKVIKTP--VVKKTESPIKLSPATPSRKRSVAVSDEEEVEEE 689
+P+ +P V E P + A P+ + + + EE
Sbjct: 1061 TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE 1103
Score = 33.1 bits (74), Expect = 1.3
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 15/142 (10%)
Query: 545 VRRPQRPRSP----PLPAVIRNAPSRPPSL--PTPRPASQPRKAPVISSTPKLPALAA-- 596
V P+ SP P PA + + +L PT AS P A ++++ + + AA
Sbjct: 1163 VPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASV 1222
Query: 597 ---REEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVI 653
E AS + + PE P PA + + L+P L S VP+P+
Sbjct: 1223 PTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEEL--SSPAASVPTPEEP 1280
Query: 654 KTP--VVKKTESPIKLSPATPS 673
+P V E P + A P+
Sbjct: 1281 ASPAAAVSNLEEPASPAAAVPT 1302
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 48.5 bits (114), Expect = 3e-05
Identities = 46/141 (32%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRP--RSPPLPAV--IRNAPSRPPSLPTPR 574
T P ++ L PL+V P P+ P R PPL A ++ PS P SLP
Sbjct: 721 TPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSP 780
Query: 575 PASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEA--PRKPANTLVKTAS--RPAPLV 630
A P +AP +TP L AL + + + P A P P T A APL+
Sbjct: 781 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL 840
Query: 631 Q-QLSPSLLPNSKSPREVPSP 650
Q SP P ++PR P+P
Sbjct: 841 QVPPSPPASPTLQAPRRPPTP 861
Score = 45.4 bits (106), Expect = 3e-04
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 13/166 (7%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQ 578
T P+ + L PL+ + P T + P P PL A + PP P+
Sbjct: 532 TPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPP 591
Query: 579 PRKAPVISS-------TPKLPALAAREEASTSRLLQPP--EAPRKPANTLVKTASRPAPL 629
P+ P ++S +P L LA + L PP P PA+ + + P+P
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 630 V-QQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPSR 674
L+ LL SP PSP V + P P+ S PS+
Sbjct: 652 APNALAVHLLQAPFSP--PPSPPV-QAPFSPPASPPVSPSATPPSQ 694
Score = 44.7 bits (104), Expect = 4e-04
Identities = 47/152 (30%), Positives = 62/152 (40%), Gaps = 17/152 (11%)
Query: 532 PLEVTTRPSTEEP----VRRPQRPRSPPLPAVIRNAPSRPPSLPTPRP-ASQPRKAPVIS 586
PL PS + P V Q P SPP P+ AP PP+ P P A+ P +AP
Sbjct: 641 PLSPLATPSPQAPNALAVHLLQAPFSPP-PSPPVQAPFSPPASPPVSPSATPPSQAPPSL 699
Query: 587 STPKL---PALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKS 643
+ P L P+ A S S P P A L S PA SP + P++
Sbjct: 700 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA------SPPMSPSATP 753
Query: 644 PREVPSPKVIKTPVVKKTESPIKLSPATPSRK 675
P V P ++ P ++ SP P +P K
Sbjct: 754 PPRV--PPLLAAPPLQVPPSPPASLPMSPLAK 783
Score = 43.9 bits (102), Expect = 7e-04
Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 518 KTTPIRSQADLKKLPLEVTTRP-------STEEPVRRP-------QRPRSPPLPAVIRNA 563
+T P + L+ P +TT P +T P P Q SPPL +
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP 618
Query: 564 PSRPPSLPTP------RPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRKPAN 617
P PP L P P + P +P+ + +P+ P A LLQ P +P P +
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP------NALAVHLLQAPFSP--PPS 670
Query: 618 TLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
V+ P P +SPS P S++P + +P + P SP P +PS
Sbjct: 671 PPVQAPFSP-PASPPVSPSATPPSQAPPSLAAPPLQVPP------SPPASPPMSPS 719
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 540 STEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREE 599
ST EP P R P ++ SR S +S R P TP+ PA ++ +
Sbjct: 216 STTEP--SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 600 ASTSRLLQPPEA--PRKPANTLVKTASRPAPLVQQLSPSLL----PNSKSPREVPSPKVI 653
+ L+PP+ PRK A AP + LS S L P+ R VP P
Sbjct: 274 PKGLQALRPPQVTPPRKDA----------APALGPLSSSPLATPSPSGTKARPVPPPDNA 323
Query: 654 KTPV------VKKTESPIKLSPATPSRKRSV 678
TP+ +P+ L+P +PS S+
Sbjct: 324 ATPLPATLPPSPPLATPLPLAPPSPSAPPSL 354
Score = 41.2 bits (95), Expect = 0.005
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 513 LEALQKTTPIRSQADLKKLPLEVTTRP-STEEPVRRPQRPR-----SPPLPAVIRNAPSR 566
L +LQ TT + S L+ +T P T+ + P RP SPPL A + + P+
Sbjct: 409 LSSLQATTSLGSPT-LQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPL-SLPAS 466
Query: 567 PPSLPTPRPASQPRKAPV-ISSTPKLPALAARE-EASTSRLLQPP---EAPRKPANTLVK 621
PP + PA P +P+ I L +LA+ +A S L+ PP ++ P +
Sbjct: 467 PPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTP 526
Query: 622 TAS------------RPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSP 669
AS P PL +P P+ ++P P+P ++ P T P P
Sbjct: 527 PASLTTPPLENLPSLAPPPLQTASAPLTTPHLETP-PCPAPCPLQAPPSPLTTPP----P 581
Query: 670 ATPS 673
TPS
Sbjct: 582 ETPS 585
Score = 40.8 bits (94), Expect = 0.006
Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 24/169 (14%)
Query: 532 PLEVTTRPSTEEPVRRP--QRPRSPPLPAVIRNAPSRPP-SLPTPRPASQPRKAPVISST 588
P +VT P P P + P P+ + P PP + TP PA+ P P+ +
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL 341
Query: 589 PKLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRPA-PLVQQLSPSLLPN---SKSP 644
P P + S L PP P A + T A P +Q + P +P+ S S
Sbjct: 342 PLAPP-SPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSL 400
Query: 645 REVPSPKVIK---------TPVVKKTESPIKLSP-------ATPSRKRS 677
+ PSP + +P ++ T S + +SP +PSR S
Sbjct: 401 QAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPAS 449
Score = 39.7 bits (91), Expect = 0.014
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 21/169 (12%)
Query: 519 TTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSR-PPSLPTPRPAS 577
T P ++ L PL+V P P+ P P P + P + PPS P P S
Sbjct: 690 TPPSQAPPSLAAPPLQVPPSPPASPPMS-PSATPPPQAPPPLAAPPLQVPPSPPASPPMS 748
Query: 578 -----QPRKAPVISSTP-KLPALAAREEASTSRLLQPPEAPRKPANTLVKTASRP----- 626
PR P++++ P ++P + PP+AP A ++ P
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFP 808
Query: 627 --APLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATPS 673
AP S + P + P + +P V+ P+++ SP PA+P+
Sbjct: 809 GQAPFSPSASLPMSPLATPPPQ--APPVLAAPLLQVPPSP----PASPT 851
Score = 35.8 bits (81), Expect = 0.20
Identities = 44/162 (27%), Positives = 55/162 (33%), Gaps = 29/162 (17%)
Query: 539 PSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAARE 598
P T P + + + R APS P PT P A S+T PA R
Sbjct: 169 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 228
Query: 599 EA--------------STSRLLQP----------PEAPRKPANTLVK--TASRP---APL 629
A S + L P P AP P+ K A RP P
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 288
Query: 630 VQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPAT 671
+ +P+L P S SP PSP K V ++ PAT
Sbjct: 289 RKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPAT 330
Score = 33.9 bits (76), Expect = 0.76
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 558 AVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRK--- 614
A R +R P L TPRP PR P P PA A R + + + P A R
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPP-----PVTPA-ALRVLGAAGAVGRKPLAERAGGI 65
Query: 615 PANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKT-----ESPIKLSP 669
T+ ++A R P + S P S+ P S + + P K T SP + S
Sbjct: 66 GGATIPESAPRAGPTRSAGTSSRNPASRPP---ASGRGERAPPAKNTSPGPVSSPGRASG 122
Query: 670 AT---PSRKRSVAVSDEEEV 686
T P ++ + +S EE V
Sbjct: 123 TTRPGPLGQKGLRISAEETV 142
Score = 33.5 bits (75), Expect = 0.99
Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 25/134 (18%)
Query: 548 PQRPRSPPL-PAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKL--PALAAREEASTSR 604
PQ P S + P + + PPSL TP PAS P + + P L P L T+
Sbjct: 500 PQAPLSSLIMPPLETQSSLAPPSLQTP-PAS--LTTPPLENLPSLAPPPLQTASAPLTTP 556
Query: 605 LLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREV-----PSPKVIKTPVVK 659
L+ P P P PL SP P ++P + +P + +P ++
Sbjct: 557 HLETPPCP------------APCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQ 604
Query: 660 KTESPIKLSP-ATP 672
SP LSP ATP
Sbjct: 605 GLPSP-PLSPLATP 617
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 48.5 bits (114), Expect = 3e-05
Identities = 62/264 (23%), Positives = 99/264 (37%), Gaps = 65/264 (24%)
Query: 495 QEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSP 554
Q + Q+Q ++ +QQQ++ +ALQ PI+ + P P + + Q + P
Sbjct: 243 QLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPP 302
Query: 555 PLPA---VIRNAPSR-PPSLPTPRPASQPR----------------KAPVI--------- 585
P P V +N PS+ PP T SQ + +AP++
Sbjct: 303 PQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQ 362
Query: 586 -------------------------SSTPKLPALAAREEASTSRLLQPPEAP-----RKP 615
SS P L + + ++ T + + PP P +
Sbjct: 363 VQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPS 422
Query: 616 ANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKL-SPATPSR 674
+ +S PAP SPS S SP+ SP +TP SP L +P PS
Sbjct: 423 SQPNSNVSSGPAP-----SPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSS 477
Query: 675 KRSVAVSDEEEVEEEAERRKERCK 698
S A S + E ++ ++ K+ K
Sbjct: 478 VMSPAGSSQAEEQQYLDKLKQLSK 501
Score = 43.9 bits (102), Expect = 7e-04
Identities = 74/366 (20%), Positives = 140/366 (38%), Gaps = 52/366 (14%)
Query: 363 HNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSA-------NWNQ 415
HNK+ A + + L+++ A I + RG + G L A +
Sbjct: 70 HNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQP 129
Query: 416 PPSSELRYKRRRAMEIPTTIQCDLCLKWRTLPFQLSSVEKDYPDTWVCSMNPDPEQDRCE 475
PP + A+ T Q L L+ L Q ++ + ++ +Q + +
Sbjct: 130 PPGTSGMAPHSMAVVSTATPQTQLQLQQVAL--QQQQQQQQFQQQQQAALQQQQQQQQQQ 187
Query: 476 ASEQKQKVPLGTFRKDMKTQEEKQKQLTEK-------------IRQQQEKLE-----ALQ 517
+ +Q F+ ++ Q++ Q+Q ++ I+QQQ++L+ LQ
Sbjct: 188 QFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQ 247
Query: 518 KTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRP-- 575
+ + Q ++ P + P+++PQ P S LP ++ P P+P
Sbjct: 248 QQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQ 307
Query: 576 ----ASQPRKAPVISSTPKLPALAAREEASTSRLL--QPP-----------EAPRKPANT 618
+QP + P S T L ++ +A ++L QPP + P +P
Sbjct: 308 PPVAQNQPSQLPPQSQT---QPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQ 364
Query: 619 LVKTASRPAPLVQQLSPSLLPNSKSPREVPSP---KVIKTPVVKKTESPIKLSPATPSRK 675
+TA + A Q ++P + + S + SP + ++TP P PS +
Sbjct: 365 QQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQ 424
Query: 676 RSVAVS 681
+ VS
Sbjct: 425 PNSNVS 430
Score = 43.9 bits (102), Expect = 7e-04
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 484 PLGTFRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEE 543
PL R M Q Q + +++QQQ ++ Q + + + L + + PS +
Sbjct: 344 PLKFVRAPMVVQ---QPPVQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQ 400
Query: 544 PVRRPQRPRSPPLPAV------------IRNAPSRPPSLPTPRPASQPRKAPVISSTPK 590
V+ PQ PP P+ + + P+ PS P P+ QP ++PV + TP+
Sbjct: 401 QVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ 459
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 48.1 bits (113), Expect = 4e-05
Identities = 42/142 (29%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 536 TTRPSTEEPVRRPQRPR----SPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKL 591
T PS++ + R P SPP P + PT P+S P P SSTP L
Sbjct: 25 TLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTP--SSTPTL 82
Query: 592 PALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
+ST L P+NT T S L +P+L P+S +P PS
Sbjct: 83 TPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS-TPTLTPS-- 139
Query: 652 VIKTPVVKKTESPIKLSPATPS 673
TP + + PI +TP+
Sbjct: 140 --STPTLTPSSRPILTRSSTPT 159
Score = 42.7 bits (99), Expect = 0.002
Identities = 45/144 (31%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPP----SLPTPRPASQPRKAPVISSTPKL 591
T PS+ + R P P I S P S PT P+S P P SSTP L
Sbjct: 143 TLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTP--SSTPTL 200
Query: 592 -PALAAREEASTSRLLQPPEAP-RKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPS 649
P+ S++ L P P P++T T S L + +P+L P+S +P PS
Sbjct: 201 TPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSS-TPTLTPS 259
Query: 650 PKVIKTPVVKKTESPIKLSPATPS 673
TP T +P TPS
Sbjct: 260 NTPTLTPSNTPTLTPSNTPTLTPS 283
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 564 PSRPPSL-PTPRPASQPRKAPVI--SSTPKLPALAAREEASTSRLLQPPEAPR-KPANTL 619
PS PP+L P+ P P P++ SSTP L S+ L P P P+NT
Sbjct: 12 PSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTP-------SSPPTLTPSNTPTLTPSNTP 64
Query: 620 VKTASRPAPLVQQLSPSLLPN-----SKSPREVPSPKVIKTPVVKKTESPIKLSPATPSR 674
T S L +P+L P S +P PS TP T +P TPS
Sbjct: 65 TLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSN 124
Query: 675 KRSVAVS 681
++ S
Sbjct: 125 TPTLTPS 131
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/141 (27%), Positives = 53/141 (37%), Gaps = 11/141 (7%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKLPA 593
T PS+ + R P P S P P+ P P P++ SSTP L
Sbjct: 159 TLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP 218
Query: 594 LAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKV 652
S+ +L P P P++ + T S L +P+L P S +P PS
Sbjct: 219 -------SSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTP-SNTPTLTPSNTP 270
Query: 653 IKTPVVKKTESPIKLSPATPS 673
TP T +P TPS
Sbjct: 271 TLTPSNTPTLTPSSTPTLTPS 291
Score = 41.2 bits (95), Expect = 0.005
Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 17/149 (11%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNA-----PSRPPSL-PTPRPASQPRKAPVI--SS 587
T PS+ + P P P + R++ PS PP+L P+ P P P + S+
Sbjct: 65 TLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSN 124
Query: 588 TPKLPALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
TP L S++ L P P P++ + T S L P +L S +P
Sbjct: 125 TPTLTP-------SSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRP-ILTRSSTPTL 176
Query: 647 VPSPKVIKTPVVKKTESPIKLSPATPSRK 675
PS TP T +P TPS +
Sbjct: 177 TPSSTPTLTPSSTPTLTPSSTPTLTPSSR 205
Score = 40.8 bits (94), Expect = 0.006
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 567 PPSLPTPRPASQPRKAPVISSTPKL-PALAAREEASTSRLLQPPEAPR-KPANTLVKTAS 624
P + PT P+S P P SSTP L P+ S++ L P P P+NT T S
Sbjct: 4 PSNTPTLTPSSPPTLTP--SSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPS 61
Query: 625 RPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
L +P+L P+S +P + P++ ++ +P L+P++P
Sbjct: 62 NTPTLTPSSTPTLTPSS-------TPTLTPQPILTRSSTP-TLTPSSP 101
Score = 40.8 bits (94), Expect = 0.006
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL-----PTPRPASQPRKAPVIS 586
P + TR ST P P P + PS P+L PT P+S P P S
Sbjct: 84 PQPILTRSST--PTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP--S 139
Query: 587 STPKL-PALAAREEASTSRLLQPPEAP-RKPANTLVKTASRPAPLVQQLSPSLLPNSKSP 644
STP L P+ S++ L P P ++T T S L +P+L P+S +P
Sbjct: 140 STPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSS-TP 198
Query: 645 REVPSPKVI----KTPVVKKTESPIKLSPATPS 673
PS + I TP + + PI +TP+
Sbjct: 199 TLTPSSRPILTRSSTPTLTPSSRPILTPSSTPT 231
Score = 39.7 bits (91), Expect = 0.014
Identities = 40/127 (31%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP----PSLPTPRPASQPRKAPVISSTPKL 591
T PS+ + P P SRP S PT P+S+P P SSTP L
Sbjct: 175 TLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTP--SSTPTL 232
Query: 592 -PALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPS 649
P+ S++ L P P P+NT T S L +P+L P+S +P PS
Sbjct: 233 TPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS-TPTLTPS 291
Query: 650 PKVIKTP 656
TP
Sbjct: 292 STPTLTP 298
Score = 39.3 bits (90), Expect = 0.018
Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKL-P 592
T PS + P P SRP + P P P++ SSTP L P
Sbjct: 119 TLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTP 178
Query: 593 ALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
+ S++ L P P P++ + T S L P L P+S +P PS +
Sbjct: 179 SSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSS-TPTLTPSSR 237
Query: 652 VIKTPVVKKTESPIKLSPATPSRKRSVAVSD 682
I T T +P TPS ++ S+
Sbjct: 238 PILTRSSTPTLTPSSTPTLTPSNTPTLTPSN 268
Score = 37.4 bits (85), Expect = 0.069
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKL-P 592
T PS+ + R P P SRP P+ P P P++ SSTP L P
Sbjct: 199 TLTPSSRPILTRSSTPTLTP--------SSRPILTPSSTPTLTPSSRPILTRSSTPTLTP 250
Query: 593 ALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNS 641
+ S + L P P P+NT T S L +P+L P+S
Sbjct: 251 SSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSS 300
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 48.1 bits (113), Expect = 4e-05
Identities = 42/142 (29%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 536 TTRPSTEEPVRRPQRPR----SPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKL 591
T PS++ + R P SPP P + PT P+S P P SSTP L
Sbjct: 25 TLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTP--SSTPTL 82
Query: 592 PALAAREEASTSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
+ST L P+NT T S L +P+L P+S +P PS
Sbjct: 83 TPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS-TPTLTPS-- 139
Query: 652 VIKTPVVKKTESPIKLSPATPS 673
TP + + PI +TP+
Sbjct: 140 --STPTLTPSSRPILTRSSTPT 159
Score = 42.7 bits (99), Expect = 0.002
Identities = 45/144 (31%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPP----SLPTPRPASQPRKAPVISSTPKL 591
T PS+ + R P P I S P S PT P+S P P SSTP L
Sbjct: 143 TLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTP--SSTPTL 200
Query: 592 -PALAAREEASTSRLLQPPEAP-RKPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPS 649
P+ S++ L P P P++T T S L + +P+L P+S +P PS
Sbjct: 201 TPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSS-TPTLTPS 259
Query: 650 PKVIKTPVVKKTESPIKLSPATPS 673
TP T +P TPS
Sbjct: 260 NTPTLTPSNTPTLTPSNTPTLTPS 283
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 564 PSRPPSL-PTPRPASQPRKAPVI--SSTPKLPALAAREEASTSRLLQPPEAPR-KPANTL 619
PS PP+L P+ P P P++ SSTP L S+ L P P P+NT
Sbjct: 12 PSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTP-------SSPPTLTPSNTPTLTPSNTP 64
Query: 620 VKTASRPAPLVQQLSPSLLPN-----SKSPREVPSPKVIKTPVVKKTESPIKLSPATPSR 674
T S L +P+L P S +P PS TP T +P TPS
Sbjct: 65 TLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSN 124
Query: 675 KRSVAVS 681
++ S
Sbjct: 125 TPTLTPS 131
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/141 (27%), Positives = 53/141 (37%), Gaps = 11/141 (7%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKLPA 593
T PS+ + R P P S P P+ P P P++ SSTP L
Sbjct: 159 TLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP 218
Query: 594 LAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPKV 652
S+ +L P P P++ + T S L +P+L P S +P PS
Sbjct: 219 -------SSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTP-SNTPTLTPSNTP 270
Query: 653 IKTPVVKKTESPIKLSPATPS 673
TP T +P TPS
Sbjct: 271 TLTPSNTPTLTPSSTPTLTPS 291
Score = 41.2 bits (95), Expect = 0.005
Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 17/149 (11%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNA-----PSRPPSL-PTPRPASQPRKAPVI--SS 587
T PS+ + P P P + R++ PS PP+L P+ P P P + S+
Sbjct: 65 TLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSN 124
Query: 588 TPKLPALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE 646
TP L S++ L P P P++ + T S L P +L S +P
Sbjct: 125 TPTLTP-------SSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRP-ILTRSSTPTL 176
Query: 647 VPSPKVIKTPVVKKTESPIKLSPATPSRK 675
PS TP T +P TPS +
Sbjct: 177 TPSSTPTLTPSSTPTLTPSSTPTLTPSSR 205
Score = 40.8 bits (94), Expect = 0.006
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 567 PPSLPTPRPASQPRKAPVISSTPKL-PALAAREEASTSRLLQPPEAPR-KPANTLVKTAS 624
P + PT P+S P P SSTP L P+ S++ L P P P+NT T S
Sbjct: 4 PSNTPTLTPSSPPTLTP--SSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPS 61
Query: 625 RPAPLVQQLSPSLLPNSKSPREVPSPKVIKTPVVKKTESPIKLSPATP 672
L +P+L P+S +P + P++ ++ +P L+P++P
Sbjct: 62 NTPTLTPSSTPTLTPSS-------TPTLTPQPILTRSSTP-TLTPSSP 101
Score = 40.8 bits (94), Expect = 0.006
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSL-----PTPRPASQPRKAPVIS 586
P + TR ST P P P + PS P+L PT P+S P P S
Sbjct: 84 PQPILTRSST--PTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP--S 139
Query: 587 STPKL-PALAAREEASTSRLLQPPEAP-RKPANTLVKTASRPAPLVQQLSPSLLPNSKSP 644
STP L P+ S++ L P P ++T T S L +P+L P+S +P
Sbjct: 140 STPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSS-TP 198
Query: 645 REVPSPKVI----KTPVVKKTESPIKLSPATPS 673
PS + I TP + + PI +TP+
Sbjct: 199 TLTPSSRPILTRSSTPTLTPSSRPILTPSSTPT 231
Score = 39.7 bits (91), Expect = 0.014
Identities = 40/127 (31%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRP----PSLPTPRPASQPRKAPVISSTPKL 591
T PS+ + P P SRP S PT P+S+P P SSTP L
Sbjct: 175 TLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTP--SSTPTL 232
Query: 592 -PALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPS 649
P+ S++ L P P P+NT T S L +P+L P+S +P PS
Sbjct: 233 TPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS-TPTLTPS 291
Query: 650 PKVIKTP 656
TP
Sbjct: 292 STPTLTP 298
Score = 39.3 bits (90), Expect = 0.018
Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKL-P 592
T PS + P P SRP + P P P++ SSTP L P
Sbjct: 119 TLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTP 178
Query: 593 ALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNSKSPREVPSPK 651
+ S++ L P P P++ + T S L P L P+S +P PS +
Sbjct: 179 SSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSS-TPTLTPSSR 237
Query: 652 VIKTPVVKKTESPIKLSPATPSRKRSVAVSD 682
I T T +P TPS ++ S+
Sbjct: 238 PILTRSSTPTLTPSSTPTLTPSNTPTLTPSN 268
Score = 37.4 bits (85), Expect = 0.069
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 536 TTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVI--SSTPKL-P 592
T PS+ + R P P SRP P+ P P P++ SSTP L P
Sbjct: 199 TLTPSSRPILTRSSTPTLTP--------SSRPILTPSSTPTLTPSSRPILTRSSTPTLTP 250
Query: 593 ALAAREEASTSRLLQPPEAPR-KPANTLVKTASRPAPLVQQLSPSLLPNS 641
+ S + L P P P+NT T S L +P+L P+S
Sbjct: 251 SSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSS 300
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 48.1 bits (113), Expect = 4e-05
Identities = 50/183 (27%), Positives = 67/183 (36%), Gaps = 23/183 (12%)
Query: 548 PQRPRSPPLPAVIRNAPSRPPSL-----PTPRPASQPRKAPVISSTPKLPALAAREEAST 602
P P P LP+ N PP L PTP PA P+ P P PAL +
Sbjct: 1431 PGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVA 1490
Query: 603 SRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPSLLPNSKSPRE--VPSPKVIKTPVVKK 660
PP P P + P P P+ P + P E PSP+ + P +
Sbjct: 1491 PTPSSPPPPPLPPPPPPAMPSPPPPP-----PPAAAPLAAPPEEPAAPSPEDPELPDTR- 1544
Query: 661 TESPIKLSPATPSRKRSVAVSDEEEVEEEAERRKERC--KRGRFVVKEEKKDSNELSDSA 718
P ++K+ A E EE E E +R FV++ E S +L+
Sbjct: 1545 --------PLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFVIRAEDIPSLKLALQT 1596
Query: 719 GEE 721
G E
Sbjct: 1597 GRE 1599
Score = 41.2 bits (95), Expect = 0.005
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 532 PLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKAPVISSTPKL 591
PL P T P PQ P+ PP P + A PP L P P+S P P +
Sbjct: 1451 PLLEEKPPPTPPPAPTPQ-PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAM 1509
Query: 592 PALAAREEASTSRLLQPPEAPRKPA 616
P+ + + L PPE P P+
Sbjct: 1510 PSPPPPPPPAAAPLAAPPEEPAAPS 1534
Score = 37.7 bits (86), Expect = 0.053
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 537 TRPSTEEPVRRPQRPRSPPLPAV------IRNAPSRPPSLPTPRPASQPRKAPVISSTPK 590
T P P +P P PP PA+ + PS PP P P P +P P
Sbjct: 1460 TPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPA 1519
Query: 591 LPALAAREEASTSRLLQPPEAP 612
LAA E + + PE P
Sbjct: 1520 AAPLAAPPEEPAAPSPEDPELP 1541
>gi|24431933 reticulon 4 isoform B [Homo sapiens]
Length = 373
Score = 47.8 bits (112), Expect = 5e-05
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 488 FRKDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRR 547
F ++ + +EE++++ E + E+LE L++ + A L P V T P+ P+
Sbjct: 27 FVREPEDEEEEEEEEEEDEDEDLEELEVLER----KPAAGLSAAP--VPTAPAAGAPLMD 80
Query: 548 ------PQRPRSPPLPAVIRNAPSRPPSL-PTPRPASQPRKAPVISSTPKLPALAAREEA 600
P PR P LPA AP R PS P+P ++ P +P +S+ P+ ++
Sbjct: 81 FGNDFVPPAPRGP-LPAAPPVAPERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDE 138
Query: 601 STSRLLQPPEAPRKPANTLVKTASRPAPLVQQLSPS 636
+R PP A P V T PAP +P+
Sbjct: 139 PPARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPA 174
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,485,844
Number of Sequences: 37866
Number of extensions: 2091468
Number of successful extensions: 21105
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 1209
Number of HSP's that attempted gapping in prelim test: 13457
Number of HSP's gapped (non-prelim): 6427
length of query: 970
length of database: 18,247,518
effective HSP length: 112
effective length of query: 858
effective length of database: 14,006,526
effective search space: 12017599308
effective search space used: 12017599308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.