Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MORC4 Sequence: fasta or formatted (900aa) NCBI GI: 145553971
Description:

zinc finger, CW type with coiled-coil domain 2 isoform b

Referenced in:

Coiled-Coil Proteins
Zinc Finger Proteins

Other entries for this name:
alt prot [937aa] zinc finger, CW type with coiled-coil domain 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         53           3
 C cysteine            1.7         15           1
 D aspartate           3.4         31           2
 E glutamate           9.4         85           2
 F phenylalanine       3.9         35           1
 G glycine             6.3         57           3
 H histidine           1.4         13           1
 I isoleucine          4.2         38           2
 K lysine              8.3         75           3
 L leucine             8.3         75           2
 M methionine          2.3         21           2
 N asparagine          4.8         43           2
 P proline             6.4         58           2
 Q glutamine           5.1         46           2
 R arginine            5.3         48           3
 S serine              7.2         65           3
 T threonine           5.4         49           2
 V valine              5.7         51           2
 W tryptophan          1.0          9           1
 Y tyrosine            3.7         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, CW type with coiled-coil domain 2 isof... 
MORC4                 0.969   zinc finger, CW type with coiled-coil domain 2 isof...
MORC3                 0.279   MORC family CW-type zinc finger 3 
MORC1                 0.076   MORC family CW-type zinc finger 1 
MORC2                 0.058   MORC family CW-type zinc finger 2 
ZCWPW1                0.019   zinc finger, CW type with PWWP domain 1 
MYO18A                0.012   myosin 18A isoform b 
MYO18A                0.012   myosin 18A isoform a 
CALD1                 0.012   caldesmon 1 isoform 1 
TPR                   0.012   nuclear pore complex-associated protein TPR 
LOC283767             0.011   golgi autoantigen, golgin subfamily a-like 
MYH2                  0.011   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.011   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH4                  0.011   myosin, heavy polypeptide 4, skeletal muscle 
CCDC88A               0.011   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.011   coiled-coil domain containing 88A isoform 1 
KIF20B                0.010   M-phase phosphoprotein 1 
BAT2D1                0.010   HBxAg transactivated protein 2 
LOC727832             0.010   golgi autoantigen, golgin subfamily a-like 
WDR87                 0.010   NYD-SP11 protein 
MYH7                  0.010   myosin, heavy chain 7, cardiac muscle, beta 
LOC440243             0.010   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH1                  0.010   myosin, heavy chain 1, skeletal muscle, adult [Homo...
SMC2                  0.010   structural maintenance of chromosomes 2 
SMC2                  0.010   structural maintenance of chromosomes 2 
SMC2                  0.010   structural maintenance of chromosomes 2 
ZCWPW2                0.010   zinc finger, CW type with PWWP domain 2 
EIF3A                 0.009   eukaryotic translation initiation factor 3, subunit 1...
TNIP3                 0.009   TNFAIP3 interacting protein 3 
TNIP3                 0.009   TNFAIP3 interacting protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press