Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 7662316
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
(1507 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 3024 0.0
gi|55956788 nucleolin [Homo sapiens] 68 8e-11
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 62 3e-09
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 62 3e-09
gi|210032580 SET domain containing 1B [Homo sapiens] 62 3e-09
gi|21735415 centromere protein B [Homo sapiens] 61 7e-09
gi|115529449 upstream binding transcription factor, RNA polymera... 61 7e-09
gi|115529451 upstream binding transcription factor, RNA polymera... 61 7e-09
gi|7657671 upstream binding transcription factor, RNA polymerase... 61 7e-09
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 61 9e-09
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 61 9e-09
gi|214010181 amyloid beta (A4) precursor-like protein 2 isoform ... 60 2e-08
gi|4502147 amyloid beta (A4) precursor-like protein 2 isoform 1 ... 60 2e-08
gi|214010183 amyloid beta (A4) precursor-like protein 2 isoform ... 60 2e-08
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 59 5e-08
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 58 8e-08
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 55 4e-07
gi|215422388 death-domain associated protein isoform a [Homo sap... 55 4e-07
gi|215422366 death-domain associated protein isoform b [Homo sap... 55 4e-07
gi|17975763 myelin transcription factor 1 [Homo sapiens] 55 4e-07
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 55 7e-07
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 54 9e-07
gi|16445033 ACRC protein [Homo sapiens] 54 1e-06
gi|42740903 MTERF domain containing 2 [Homo sapiens] 53 2e-06
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 53 2e-06
gi|42476169 Paf1, RNA polymerase II associated factor, homolog [... 53 2e-06
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 53 3e-06
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 53 3e-06
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 53 3e-06
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 53 3e-06
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 3024 bits (7840), Expect = 0.0
Identities = 1507/1507 (100%), Positives = 1507/1507 (100%)
Query: 1 MTTVVVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSQLIEKETEEYRKGDPDPFDDR 60
MTTVVVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSQLIEKETEEYRKGDPDPFDDR
Sbjct: 1 MTTVVVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSQLIEKETEEYRKGDPDPFDDR 60
Query: 61 HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV 120
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
Sbjct: 61 HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV 120
Query: 121 VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR 180
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
Sbjct: 121 VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR 180
Query: 181 ELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGDQEEASGDMEIS 240
ELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGDQEEASGDMEIS
Sbjct: 181 ELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGDQEEASGDMEIS 240
Query: 241 FHLDSGHKTSSRVNSTTKPEDGGLKKNKSAKQGDRENFRKAKQKLGFSSSDPDRMFVELS 300
FHLDSGHKTSSRVNSTTKPEDGGLKKNKSAKQGDRENFRKAKQKLGFSSSDPDRMFVELS
Sbjct: 241 FHLDSGHKTSSRVNSTTKPEDGGLKKNKSAKQGDRENFRKAKQKLGFSSSDPDRMFVELS 300
Query: 301 NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI 360
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
Sbjct: 301 NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI 360
Query: 361 DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL 420
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
Sbjct: 361 DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL 420
Query: 421 SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY 480
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
Sbjct: 421 SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY 480
Query: 481 DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK 540
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
Sbjct: 481 DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK 540
Query: 541 QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL 600
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
Sbjct: 541 QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL 600
Query: 601 LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS 660
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
Sbjct: 601 LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS 660
Query: 661 IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKSSEH 720
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKSSEH
Sbjct: 661 IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKSSEH 720
Query: 721 TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL 780
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
Sbjct: 721 TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL 780
Query: 781 FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ 840
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
Sbjct: 781 FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ 840
Query: 841 SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP 900
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
Sbjct: 841 SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP 900
Query: 901 RTPRIANGIATRLGSHAAVGASAPSAPTAHPQPRPPQGPLALPGPSYAGNSPLIGRISFI 960
RTPRIANGIATRLGSHAAVGASAPSAPTAHPQPRPPQGPLALPGPSYAGNSPLIGRISFI
Sbjct: 901 RTPRIANGIATRLGSHAAVGASAPSAPTAHPQPRPPQGPLALPGPSYAGNSPLIGRISFI 960
Query: 961 RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK 1020
RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK
Sbjct: 961 RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK 1020
Query: 1021 NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF 1080
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF
Sbjct: 1021 NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF 1080
Query: 1081 RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH 1140
RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
Sbjct: 1081 RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH 1140
Query: 1141 LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA 1200
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
Sbjct: 1141 LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA 1200
Query: 1201 HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM 1260
HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
Sbjct: 1201 HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM 1260
Query: 1261 NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD 1320
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
Sbjct: 1261 NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD 1320
Query: 1321 LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM 1380
LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM
Sbjct: 1321 LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM 1380
Query: 1381 DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED 1440
DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED
Sbjct: 1381 DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED 1440
Query: 1441 DNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
DNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD
Sbjct: 1441 DNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
Query: 1501 IILSLNE 1507
IILSLNE
Sbjct: 1501 IILSLNE 1507
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 67.8 bits (164), Expect = 8e-11
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 30/136 (22%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED 1449
G+ ED DEEED + EE EE+D+DED+D+ D+++ A ED+++E+ +D
Sbjct: 137 GKNAKKEDSDEEEDDDSEEDEEDDEDEDEDE-DEIEPAAMKAAAAAPASEDEDDEDDEDD 195
Query: 1450 GDNDFSPSDEELANLLE-------------------------EGEDGEDEDSDADEEVEL 1484
D+D D+ +E E ED EDED D DE+ E
Sbjct: 196 EDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDE- 254
Query: 1485 ILGDTDSSDNSDLEDD 1500
D D D+ + E++
Sbjct: 255 ---DDDDEDDEEEEEE 267
Score = 56.6 bits (135), Expect = 2e-07
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 37/118 (31%)
Query: 1396 EDEDEEEDQEEEE------------QEEEDDDEDDDDTDDLDELDTDQLLEA-------- 1435
+DEDE+ED++E E E+EDD++D+DD DD D+ + D EA
Sbjct: 159 DDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKG 218
Query: 1436 ------------ELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEE 1481
+ ED++ E ED D+D DE+ ++ ED E+E+ + +EE
Sbjct: 219 KKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDED-----DDDEDDEEEEEEEEEE 271
Score = 56.2 bits (134), Expect = 2e-07
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Query: 1385 RLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNE 1444
++ V + +AEDEDEEED E+E+ ++++DDEDDDD DD +E E E EE+ E
Sbjct: 223 KVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEE-------EEEEEEEPVKE 275
Query: 1445 NAGE 1448
G+
Sbjct: 276 APGK 279
Score = 42.0 bits (97), Expect = 0.004
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 27/80 (33%)
Query: 1396 EDEDEEEDQEEEE---------------------------QEEEDDDEDDDDTDDLDELD 1428
ED+D++E+ + EE ++EE+DDED+DD DD D+ D
Sbjct: 196 EDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDED 255
Query: 1429 TDQLLEAELEEDDNNENAGE 1448
D + E EE++ E E
Sbjct: 256 DDDEDDEEEEEEEEEEPVKE 275
Score = 42.0 bits (97), Expect = 0.004
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 26/84 (30%)
Query: 1396 EDEDEEEDQEEEEQEE--------------------EDDDEDDDDTDDLDELDTDQLLEA 1435
+D+DEE+D EEE E ED+DE++DD D+ D+ D D
Sbjct: 198 DDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDD---- 253
Query: 1436 ELEEDDNNENAGEDGDNDFSPSDE 1459
E+DD+ ++ E+ + + P E
Sbjct: 254 --EDDDDEDDEEEEEEEEEEPVKE 275
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 62.4 bits (150), Expect = 3e-09
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 13/90 (14%)
Query: 1395 AEDEDEEEDQ-EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDND 1453
A D D E D +EEE++EE +DE+D+D +D +E + D EEDD +E+ D D+D
Sbjct: 155 APDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFD-------EEDDEDEDVEGDEDDD 207
Query: 1454 FSPSDEELANLLEEGEDGEDEDSDADEEVE 1483
+EE E G D EDED D DEE E
Sbjct: 208 EVSEEEE-----EFGLDEEDEDEDEDEEEE 232
Score = 55.5 bits (132), Expect = 4e-07
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
E EDEE++ +E+ +EEE D+EDD+D D + D D++ E E E + E+ ED D
Sbjct: 173 EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDED---- 228
Query: 1456 PSDEELANLLEEGEDGEDEDSDADEEVE 1483
+EE EEG GE + D+E E
Sbjct: 229 --EEE-----EEGGKGEKRKRETDDEGE 249
Score = 49.3 bits (116), Expect = 3e-05
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
Query: 1396 EDEDEEEDQEEE--EQEEEDDD-EDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDN 1452
EDED+E+ +EEE E+++ED+D E D+D D++ E + + L+ E E++D +E E G
Sbjct: 178 EDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKG 237
Query: 1453 DFSPSDEELANLLEEGED 1470
+ + + +EGED
Sbjct: 238 EKRKRETD-----DEGED 250
Score = 38.5 bits (88), Expect = 0.050
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 1437 LEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSD 1496
L+ D + D D + DEE + EEGED EDED + EE E D + D
Sbjct: 145 LDGYDREDQEAPDSDAEVDGVDEEEED--EEGEDEEDEDDEDGEEEEFDEEDDEDEDVEG 202
Query: 1497 LEDDIILSLNE 1507
EDD +S E
Sbjct: 203 DEDDDEVSEEE 213
Score = 34.7 bits (78), Expect = 0.72
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 1388 EVGRQRLAEDEDEEEDQEE----EEQEEEDDDEDDDD 1420
E G EDEDE+E++EE E+++ E DDE +DD
Sbjct: 215 EFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 62.4 bits (150), Expect = 3e-09
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 21/121 (17%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNEN---------- 1445
++EDEE D+EEEE+ EE+D++DD+D +D+++ + ++ E E EE++ NE+
Sbjct: 121 DEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRI 180
Query: 1446 ----AGEDGDNDFSPSDEELA--NLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
+D +ND + +EL +LL G+ ED A E E+ +S+ ++ LED
Sbjct: 181 MQDTEKDDNNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTESEM-----NSNTSNSLED 235
Query: 1500 D 1500
D
Sbjct: 236 D 236
Score = 62.0 bits (149), Expect = 4e-09
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
ED DE+E+ E EE E++D+ D+D +D +E D ++ E E+EE+D +++ EDG+ D
Sbjct: 97 EDMDEKEEDEGEEYSEDNDEPGDEDEED-EEGDREE--EEEIEEEDEDDD--EDGE-DVE 150
Query: 1456 PSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
+EE EE E+ E+ED + I+ DT+ DN++ E D
Sbjct: 151 DEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYD 195
Score = 47.8 bits (112), Expect = 8e-05
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 1389 VGRQRLAEDEDEEEDQEEE-------EQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDD 1441
+ ++R +D+ +E + + D+ +D D T+D+DE + D E E +D
Sbjct: 57 LAKKRKTQDKQPQEPAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEED---EGEEYSED 113
Query: 1442 NNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
N+E ED +++ +EE + EE ED +++ D ++E E + + + + ED
Sbjct: 114 NDEPGDEDEEDEEGDREEE-EEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENED 170
Score = 44.3 bits (103), Expect = 0.001
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1394 LAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDEL-DTDQLLEAELEEDDNNENAGEDGDN 1452
LA+ ++ Q +E + D+ +DE D+D + + +E+D E ED D
Sbjct: 57 LAKKRKTQDKQPQEPAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDE 116
Query: 1453 DFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
+E+ EE E+ E+ED D DE+ E + + + + + E++
Sbjct: 117 PGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEE 164
Score = 36.6 bits (83), Expect = 0.19
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 25/115 (21%)
Query: 1396 EDEDEEEDQEEE--------EQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAG 1447
E+E+EEE+++ + Q+ E DD ++D+ D+ DEL LL N
Sbjct: 161 EEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLL--------NLGKIA 212
Query: 1448 EDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDII 1502
ED E +N ED D++ + + EL L DL+ D++
Sbjct: 213 EDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSELSL---------DLDSDVV 258
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 62.4 bits (150), Expect = 3e-09
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 1391 RQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDG 1450
++ L+E+++ E++EE E+EEE++D+DDDD+DD D E E DD + E
Sbjct: 1038 KESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRD----------ESENDDEDTALSEAS 1087
Query: 1451 DNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDII 1502
+ D SDEE + + S++ E E S +S+ E++++
Sbjct: 1088 EKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVV 1139
Score = 52.4 bits (124), Expect = 3e-06
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNE---- 1444
+ ++ + +E+EE ++EEEE++++DDD DD D + D+ DT +E +E D++E
Sbjct: 1041 LSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETV 1100
Query: 1445 -----------NAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTD--S 1491
++ ++F S E + E+ E+ + + +EE E ++ + S
Sbjct: 1101 SIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESMAS 1160
Query: 1492 SDNSDLEDD 1500
+ D E D
Sbjct: 1161 AGPEDFEQD 1169
Score = 41.2 bits (95), Expect = 0.008
Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDD---------------------------------E 1416
G Q+ ++++EE + E D D E
Sbjct: 976 GDQKRLRPSTSVDEEDEESERERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEE 1035
Query: 1417 DDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDS 1476
D+ ++ ++ T++ EAE EE++ +++ + D D S +D+E L E + ++ DS
Sbjct: 1036 DEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDE-DTALSEASEKDEGDS 1094
Query: 1477 DADEEVELILGDTDSSDNSD 1496
D +E V ++ +++ +S+
Sbjct: 1095 DEEETVSIVTSKAEATSSSE 1114
Score = 35.8 bits (81), Expect = 0.32
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 1403 DQEEEEQEEEDDDEDDDDTDDLDELDTDQL-------LEAELE---EDDNNENAGEDGDN 1452
D+E+EE E E D + D +L + D + EL+ E+D E+ E+ ++
Sbjct: 988 DEEDEESERERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQES 1047
Query: 1453 --DFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDIILSL 1505
+ ++EE ++ +D +D D +++ + L + D D +++ +S+
Sbjct: 1048 TEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSI 1102
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 61.2 bits (147), Expect = 7e-09
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 1379 NMDTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELE 1438
N L G + E+E+EEE++ E E+EEE+ +E++++ + +EL ++ +E E +
Sbjct: 394 NATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGD 453
Query: 1439 ED-DNNENAGEDGDNDFSPSDEELANLLEEG--------------------EDGEDEDSD 1477
D D E E+ ++ +++ ++E G E GED DSD
Sbjct: 454 VDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSD 513
Query: 1478 ADEEVELILGDTDSSDNSDLED 1499
++EE + D D D+ D ED
Sbjct: 514 SEEEDDEEEDDEDEDDDDDEED 535
Score = 49.3 bits (116), Expect = 3e-05
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 32/123 (26%)
Query: 1388 EVGRQRLAEDEDEEEDQE--------EEEQEEEDDDEDDDDTDDLDELDTDQLLEAE--- 1436
E G E+E EEE++E EEE+ EE+ D D D+ ++ DE + + LEAE
Sbjct: 418 EEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWA 477
Query: 1437 --LEEDDNNENA-----------------GEDGDNDFSPSDEELANLLEEGEDGEDEDSD 1477
+ E + A GED D+D D+E + +E ED +D++ D
Sbjct: 478 QGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEED--DEDEDDDDDEED 535
Query: 1478 ADE 1480
DE
Sbjct: 536 GDE 538
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1360 DTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDD 1419
+ +D V+E GS A + + ED D + ++E++E+E+++D++DDD
Sbjct: 472 EAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDD 531
Query: 1420 DTDDLDELDTDQLLEA 1435
D +D DE+ EA
Sbjct: 532 DEEDGDEVPVPSFGEA 547
Score = 33.9 bits (76), Expect = 1.2
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 24/60 (40%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPS 1457
ED + D EEE+ EEEDD+++DDD D E EDGD PS
Sbjct: 508 EDSDSDSEEEDDEEEDDEDEDDDDD---------------------E---EDGDEVPVPS 543
>gi|115529449 upstream binding transcription factor, RNA polymerase I
isoform b [Homo sapiens]
Length = 727
Score = 61.2 bits (147), Expect = 7e-09
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
+E++DEE++ +E+E EEE+DDE+ D ++D + ++ E E E+ D NE ED D+D
Sbjct: 640 SEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD-SSESSSEDESEDGDENEEDDEDEDDD- 697
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNS 1495
E+ ++ ED +S+ GD+ SD++
Sbjct: 698 -----------EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 57.8 bits (138), Expect = 8e-08
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED-GDNDFSPSDEELAN 1463
+ + + EEDD+ED+DD D E E EEDD N ++ ED GD+ S S++E +
Sbjct: 635 QSKSESEEDDEEDEDDED-----------EDEEEEDDENGDSSEDGGDSSESSSEDESED 683
Query: 1464 LLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
E ED EDED D D++ + SS +S D
Sbjct: 684 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 720
>gi|115529451 upstream binding transcription factor, RNA polymerase I
isoform b [Homo sapiens]
Length = 727
Score = 61.2 bits (147), Expect = 7e-09
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
+E++DEE++ +E+E EEE+DDE+ D ++D + ++ E E E+ D NE ED D+D
Sbjct: 640 SEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD-SSESSSEDESEDGDENEEDDEDEDDD- 697
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNS 1495
E+ ++ ED +S+ GD+ SD++
Sbjct: 698 -----------EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 57.8 bits (138), Expect = 8e-08
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED-GDNDFSPSDEELAN 1463
+ + + EEDD+ED+DD D E E EEDD N ++ ED GD+ S S++E +
Sbjct: 635 QSKSESEEDDEEDEDDED-----------EDEEEEDDENGDSSEDGGDSSESSSEDESED 683
Query: 1464 LLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
E ED EDED D D++ + SS +S D
Sbjct: 684 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 720
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 61.2 bits (147), Expect = 7e-09
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
+E++DEE++ +E+E EEE+DDE+ D ++D + ++ E E E+ D NE ED D+D
Sbjct: 677 SEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD-SSESSSEDESEDGDENEEDDEDEDDD- 734
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNS 1495
E+ ++ ED +S+ GD+ SD++
Sbjct: 735 -----------EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 57.8 bits (138), Expect = 8e-08
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED-GDNDFSPSDEELAN 1463
+ + + EEDD+ED+DD D E E EEDD N ++ ED GD+ S S++E +
Sbjct: 672 QSKSESEEDDEEDEDDED-----------EDEEEEDDENGDSSEDGGDSSESSSEDESED 720
Query: 1464 LLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
E ED EDED D D++ + SS +S D
Sbjct: 721 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 757
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 60.8 bits (146), Expect = 9e-09
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 1387 YEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA 1446
Y+ Q + + + + ++EE++EE +DE D + +D +E + D+ EED++ +
Sbjct: 168 YDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDE------EEDEDEDVE 221
Query: 1447 GEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
G+D ++ S +EE L++ ED EDED D +EE E G+ + D ED
Sbjct: 222 GDDDKDEVSEEEEEFG--LDKDEDDEDEDEDEEEE-ESGKGENRKRETDDEED 271
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 1403 DQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELA 1462
D E++E + D D D ++ DE E E E+D NE+ E+ ++ DE++
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDE-------EGEDEKDXENEDGEEEELDEEEDEDEDV- 220
Query: 1463 NLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
EG+D +DE S+ +EE L + D ++ D E++
Sbjct: 221 ----EGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEE 254
Score = 37.0 bits (84), Expect = 0.14
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
Query: 1417 DDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGE-DED 1475
D D +D + D+D ++ +E+++ E GED +++ N E+GE+ E DE+
Sbjct: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEE--GED--------EKDXEN--EDGEEEELDEE 213
Query: 1476 SDADEEVELILGDTDSSDNSDLEDDIILSLNE 1507
D DE+VE GD D + S+ E++ L +E
Sbjct: 214 EDEDEDVE---GDDDKDEVSEEEEEFGLDKDE 242
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 60.8 bits (146), Expect = 9e-09
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 1387 YEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA 1446
Y+ Q + + + + ++EE++EE +DE D + +D +E + D+ EED++ +
Sbjct: 168 YDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDE------EEDEDEDVE 221
Query: 1447 GEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
G+D ++ S +EE L++ ED EDED D +EE E G+ + D ED
Sbjct: 222 GDDDKDEVSEEEEEFG--LDKDEDDEDEDEDEEEE-ESGKGENRKRETDDEED 271
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 1403 DQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELA 1462
D E++E + D D D ++ DE E E E+D NE+ E+ ++ DE++
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDE-------EGEDEKDXENEDGEEEELDEEEDEDEDV- 220
Query: 1463 NLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
EG+D +DE S+ +EE L + D ++ D E++
Sbjct: 221 ----EGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEE 254
Score = 37.0 bits (84), Expect = 0.14
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
Query: 1417 DDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGE-DED 1475
D D +D + D+D ++ +E+++ E GED +++ N E+GE+ E DE+
Sbjct: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEE--GED--------EKDXEN--EDGEEEELDEE 213
Query: 1476 SDADEEVELILGDTDSSDNSDLEDDIILSLNE 1507
D DE+VE GD D + S+ E++ L +E
Sbjct: 214 EDEDEDVE---GDDDKDEVSEEEEEFGLDKDE 242
>gi|214010181 amyloid beta (A4) precursor-like protein 2 isoform 2
[Homo sapiens]
Length = 751
Score = 60.1 bits (144), Expect = 2e-08
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDND---- 1453
E+EEED+EEEE+E+E++D D ++ E D + EA ++EDD +E GE+ D
Sbjct: 215 EEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYY 274
Query: 1454 ---FSPSDEELANLLEEGEDGEDEDSDADEEVELI 1485
F D N E G DG D + +V+ +
Sbjct: 275 YDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKAV 309
Score = 36.6 bits (83), Expect = 0.19
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 27/86 (31%)
Query: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANL 1464
+EEE+E+E+++E++D+ +D D ++ EA+LE DF+
Sbjct: 214 KEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLE--------------DFT--------- 250
Query: 1465 LEEGEDGEDEDSDADEEVELILGDTD 1490
E DED + +EE E ++ D D
Sbjct: 251 ----EAAVDEDDEDEEEGEEVVEDRD 272
Score = 35.0 bits (79), Expect = 0.55
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 28/98 (28%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQ-----------------------EEEDDDEDDDDTDDLD 1425
V ++ EDE+EEE+++EEE E+++D+E+ ++ +
Sbjct: 212 VSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVE-- 269
Query: 1426 ELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELAN 1463
D D + +D N EN E G +D + SD+E+ +
Sbjct: 270 --DRDYYYDTFKGDDYNEENPTEPG-SDGTMSDKEITH 304
>gi|4502147 amyloid beta (A4) precursor-like protein 2 isoform 1 [Homo
sapiens]
Length = 763
Score = 60.1 bits (144), Expect = 2e-08
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDND---- 1453
E+EEED+EEEE+E+E++D D ++ E D + EA ++EDD +E GE+ D
Sbjct: 215 EEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYY 274
Query: 1454 ---FSPSDEELANLLEEGEDGEDEDSDADEEVELI 1485
F D N E G DG D + +V+ +
Sbjct: 275 YDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKAV 309
Score = 36.6 bits (83), Expect = 0.19
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 27/86 (31%)
Query: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANL 1464
+EEE+E+E+++E++D+ +D D ++ EA+LE DF+
Sbjct: 214 KEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLE--------------DFT--------- 250
Query: 1465 LEEGEDGEDEDSDADEEVELILGDTD 1490
E DED + +EE E ++ D D
Sbjct: 251 ----EAAVDEDDEDEEEGEEVVEDRD 272
Score = 35.0 bits (79), Expect = 0.55
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 28/98 (28%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQ-----------------------EEEDDDEDDDDTDDLD 1425
V ++ EDE+EEE+++EEE E+++D+E+ ++ +
Sbjct: 212 VSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVE-- 269
Query: 1426 ELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELAN 1463
D D + +D N EN E G +D + SD+E+ +
Sbjct: 270 --DRDYYYDTFKGDDYNEENPTEPG-SDGTMSDKEITH 304
>gi|214010183 amyloid beta (A4) precursor-like protein 2 isoform 3
[Homo sapiens]
Length = 695
Score = 59.7 bits (143), Expect = 2e-08
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDND---- 1453
E+EEED+EEEE+E+E++D D ++ E D + EA ++EDD +E GE+ D
Sbjct: 215 EEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYY 274
Query: 1454 ---FSPSDEELANLLEEGEDGEDEDSDADEEVEL 1484
F D N E G DG D + +V++
Sbjct: 275 YDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKV 308
Score = 36.6 bits (83), Expect = 0.19
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 27/86 (31%)
Query: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANL 1464
+EEE+E+E+++E++D+ +D D ++ EA+LE DF+
Sbjct: 214 KEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLE--------------DFT--------- 250
Query: 1465 LEEGEDGEDEDSDADEEVELILGDTD 1490
E DED + +EE E ++ D D
Sbjct: 251 ----EAAVDEDDEDEEEGEEVVEDRD 272
Score = 35.0 bits (79), Expect = 0.55
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 28/98 (28%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQ-----------------------EEEDDDEDDDDTDDLD 1425
V ++ EDE+EEE+++EEE E+++D+E+ ++ +
Sbjct: 212 VSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVE-- 269
Query: 1426 ELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELAN 1463
D D + +D N EN E G +D + SD+E+ +
Sbjct: 270 --DRDYYYDTFKGDDYNEENPTEPG-SDGTMSDKEITH 304
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 58.5 bits (140), Expect = 5e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA 1446
EDED+ +D+EEEE+E+E+DD++DD+ ++ DE D D E EL+ED + NA
Sbjct: 2426 EDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDMNA 2476
Score = 49.3 bits (116), Expect = 3e-05
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Query: 1400 EEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDE 1459
+ ED+EE QEE+ ++D+ D DE + E E EEDD ++ GE+GD D
Sbjct: 2408 DPEDEEEHTQEEDSSGSNEDEDDSQDEEEE----EEEDEEDDQEDDEGEEGDED------ 2457
Query: 1460 ELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDIILSLN 1506
+ +DG + + D D ++ + D EDD+I+ +
Sbjct: 2458 -------DDDDGSEMELDEDYP-DMNASPLVRFERFDREDDLIIEFD 2496
Score = 37.7 bits (86), Expect = 0.085
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
++ED++ED E EE +E+DDD+ + D D D + E D ++ + DN FS
Sbjct: 2441 DEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDMNASPLVRFERFDREDDLIIEFDNMFS 2500
Query: 1456 PSDE 1459
+ +
Sbjct: 2501 SATD 2504
Score = 32.3 bits (72), Expect = 3.6
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 30/116 (25%)
Query: 1409 QEEEDDDEDDDDTDDLDELD----TDQLLEAELEEDDNNENA------------------ 1446
QE + ++E +D D+L E D ++ + ED++ E+
Sbjct: 2340 QEMQVENELEDLIDELLERDGGSGNSTIIVSRSGEDESQEDVLMDEAPSNLSQASTLQAN 2399
Query: 1447 GEDGDNDFSPSDEELANLLEEGEDG--EDEDSDADEEVELILGDTDSSDNSDLEDD 1500
ED N P DEE + EE G EDED DEE E + + D EDD
Sbjct: 2400 REDSMNILDPEDEE-EHTQEEDSSGSNEDEDDSQDEEEE-----EEEDEEDDQEDD 2449
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 57.8 bits (138), Expect = 8e-08
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 12/89 (13%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
+ DE+EEE++EEEE+EEE+++E++D + +E D ++ E E EE+ E+ + +F
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEE--EEEDEEEYFEEEEEEE-------EEFEEEF 935
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVE 1483
+EE L EE E+ ++E+ + EEVE
Sbjct: 936 ---EEEEGELEEEEEEEDEEEEEELEEVE 961
Score = 49.7 bits (117), Expect = 2e-05
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
E+E+EEE++EEEE+E+ +++E+D++ +E + ++ E E EE++ E+ +
Sbjct: 894 EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEE---- 949
Query: 1456 PSDEELANLLEEGEDGE 1472
DEE LEE ED E
Sbjct: 950 --DEEEEEELEEVEDLE 964
Score = 48.1 bits (113), Expect = 6e-05
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
E+E+EEE++EEEE++ E+++ED+++ + +E + ++ E EE+ E E+ D +
Sbjct: 895 EEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEE 954
Query: 1456 PSDEELANLLEEGEDGEDED 1475
EE+ +L GE E+
Sbjct: 955 EELEEVEDLEFGTAGGEVEE 974
Score = 38.5 bits (88), Expect = 0.050
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1434 EAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSD 1493
E E EE++ E E+ + DF +E+ EE E+ E+E + EE E L + + +
Sbjct: 890 EEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEE 949
Query: 1494 NSDLEDDI 1501
+ + E+++
Sbjct: 950 DEEEEEEL 957
Score = 38.5 bits (88), Expect = 0.050
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 23/107 (21%)
Query: 1396 EDEDE---EEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDN 1452
EDE+E EE++EEEE EEE ++E+ + ++ +E D ++ E E ED AG + +
Sbjct: 915 EDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEE 974
Query: 1453 DFSP--------------------SDEELANLLEEGEDGEDEDSDAD 1479
P + E LLE E G +E+ AD
Sbjct: 975 GAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGAD 1021
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 55.5 bits (132), Expect = 4e-07
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
+DED+EE EEEE+EEE+++E+ D+++ ++L+ Q + + EE+D E A D D S
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKS 495
Query: 1456 P 1456
P
Sbjct: 496 P 496
Score = 52.0 bits (123), Expect = 4e-06
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 1391 RQRLAEDEDEEEDQEEEEQEEEDDDE--DDDDTDDLDELDTDQLLEAELEEDDNNE-NAG 1447
R +++DEE D+EEEE+EEE+++E D ++ +DL+++ Q E + EED+ E AG
Sbjct: 432 RAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ--EDDEEEDEEEEAAAG 489
Query: 1448 EDGD 1451
+DGD
Sbjct: 490 KDGD 493
Score = 45.8 bits (107), Expect = 3e-04
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 37/105 (35%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
AE +DE++++ +EE+EEE+++E+++ TD +E EED
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATD------------SEEEED-------------- 466
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILG-DTDSSDNSDLE 1498
LE+ ++G+++D + DEE E G D D S S L+
Sbjct: 467 ----------LEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQ 501
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGE 1448
+ + + +D+ EE ++++ + DT + LD+ + + + + E
Sbjct: 376 ISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEAS-LDSGEGPSGMASQGCPSASRAE 434
Query: 1449 DGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D D SDEE EE E+ E+E+ D E E L D E+D
Sbjct: 435 TDDEDDEESDEE-----EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED 481
>gi|215422388 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 55.5 bits (132), Expect = 4e-07
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
+DED+EE EEEE+EEE+++E+ D+++ ++L+ Q + + EE+D E A D D S
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKS 495
Query: 1456 P 1456
P
Sbjct: 496 P 496
Score = 52.0 bits (123), Expect = 4e-06
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 1391 RQRLAEDEDEEEDQEEEEQEEEDDDE--DDDDTDDLDELDTDQLLEAELEEDDNNE-NAG 1447
R +++DEE D+EEEE+EEE+++E D ++ +DL+++ Q E + EED+ E AG
Sbjct: 432 RAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ--EDDEEEDEEEEAAAG 489
Query: 1448 EDGD 1451
+DGD
Sbjct: 490 KDGD 493
Score = 45.8 bits (107), Expect = 3e-04
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 37/105 (35%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
AE +DE++++ +EE+EEE+++E+++ TD +E EED
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATD------------SEEEED-------------- 466
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILG-DTDSSDNSDLE 1498
LE+ ++G+++D + DEE E G D D S S L+
Sbjct: 467 ----------LEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQ 501
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGE 1448
+ + + +D+ EE ++++ + DT + LD+ + + + + E
Sbjct: 376 ISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEAS-LDSGEGPSGMASQGCPSASRAE 434
Query: 1449 DGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D D SDEE EE E+ E+E+ D E E L D E+D
Sbjct: 435 TDDEDDEESDEE-----EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED 481
>gi|215422366 death-domain associated protein isoform b [Homo sapiens]
Length = 752
Score = 55.5 bits (132), Expect = 4e-07
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
+DED+EE EEEE+EEE+++E+ D+++ ++L+ Q + + EE+D E A D D S
Sbjct: 448 DDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKS 507
Query: 1456 P 1456
P
Sbjct: 508 P 508
Score = 52.0 bits (123), Expect = 4e-06
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 1391 RQRLAEDEDEEEDQEEEEQEEEDDDE--DDDDTDDLDELDTDQLLEAELEEDDNNE-NAG 1447
R +++DEE D+EEEE+EEE+++E D ++ +DL+++ Q E + EED+ E AG
Sbjct: 444 RAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQ--EDDEEEDEEEEAAAG 501
Query: 1448 EDGD 1451
+DGD
Sbjct: 502 KDGD 505
Score = 45.8 bits (107), Expect = 3e-04
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 37/105 (35%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
AE +DE++++ +EE+EEE+++E+++ TD +E EED
Sbjct: 445 AETDDEDDEESDEEEEEEEEEEEEEATD------------SEEEED-------------- 478
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILG-DTDSSDNSDLE 1498
LE+ ++G+++D + DEE E G D D S S L+
Sbjct: 479 ----------LEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQ 513
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 1389 VGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGE 1448
+ + + +D+ EE ++++ + DT + LD+ + + + + E
Sbjct: 388 ISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEAS-LDSGEGPSGMASQGCPSASRAE 446
Query: 1449 DGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D D SDEE EE E+ E+E+ D E E L D E+D
Sbjct: 447 TDDEDDEESDEE-----EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED 493
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 55.5 bits (132), Expect = 4e-07
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 24/123 (19%)
Query: 1394 LAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED---- 1449
L+ +E++EE++EEEE+EEED++E++++ ++ +E + ++ E E EE++ E A D
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 314
Query: 1450 ---------------GDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDN 1494
G SP E + +D +DED+ + + TD S+
Sbjct: 315 EDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTV-----TDESEM 369
Query: 1495 SDL 1497
D+
Sbjct: 370 QDM 372
Score = 35.0 bits (79), Expect = 0.55
Identities = 25/111 (22%), Positives = 49/111 (44%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED 1449
G L ++ E EE E+ ED ++ ++ + L LE+ + E++ +
Sbjct: 193 GIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQK 252
Query: 1450 GDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
G DEE EE E+ E+E+ + +EE E + + + + E++
Sbjct: 253 GILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Score = 34.7 bits (78), Expect = 0.72
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 1392 QRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNEN---AGE 1448
Q AE EE ++ + ED +E + T + + Q LE E+ + + + E
Sbjct: 199 QEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHE 258
Query: 1449 DGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDII 1502
+ D + +EE EE E+ E+E+ + +EE E + + + + D+I
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVI 312
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 54.7 bits (130), Expect = 7e-07
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDD--------LDELDTDQLLEAELEEDD 1441
G ++ E EDEEE++EEEE +EE+++EDDD LDE D D E E + +D
Sbjct: 35 GSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED 94
Query: 1442 NNENAGEDGDN-DFSPSDEE------LANLLEEGEDGEDEDSDADEEVELILGDTDSSDN 1494
E+ E N D DE+ L NL + + E + + + +G+T +
Sbjct: 95 GAEDILEKASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGS 154
Query: 1495 SDLEDDI 1501
+L DDI
Sbjct: 155 DELSDDI 161
Score = 40.0 bits (92), Expect = 0.017
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 1394 LAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA----GED 1449
+++ ED +EE+ + D +E + D + +++ E E EE++ E E+
Sbjct: 1 MSDSEDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEE 60
Query: 1450 GDNDFSPSDEELANLLEEGEDGEDEDSDAD---EEVELILGDTDSSDNSDLEDD 1500
D+D P + + D +DE D D + E IL + DN L++D
Sbjct: 61 EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDED 114
Score = 36.6 bits (83), Expect = 0.19
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 22/106 (20%)
Query: 1388 EVGRQRLAEDEDEEEDQE-------EEEQEEEDDDEDDDD---TDDLDELDTDQ------ 1431
E +R ++ E+ E D+E E+E+E ED++E++++ ++ +E D D+
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPR 71
Query: 1432 -----LLEAELEEDDNNENAGEDGDNDFSPSDEELAN-LLEEGEDG 1471
L EA+++++ +E+ EDG D + N +L+E G
Sbjct: 72 HGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSG 117
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 54.3 bits (129), Expect = 9e-07
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
+ +DEEED +E + E ED +ED++D DD DE DT E E D+NE G ND
Sbjct: 1947 DSDDEEEDDDENDGEHEDYEEDEEDDDD-DEDDTGMGDEGE----DSNEGTGSADGNDGY 2001
Query: 1456 PSDEELANLLEEGEDGEDEDSDADEEV 1482
+D+ EG DG D ++ +E +
Sbjct: 2002 EADD------AEGGDGTDPGTETEESM 2022
Score = 38.9 bits (89), Expect = 0.038
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 1402 EDQEEEEQE--------EEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGE----D 1449
ED EE Q + D D + D +++++ EE+D++EN GE +
Sbjct: 1907 EDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYE 1966
Query: 1450 GDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSD 1496
D + DE+ + +EGED + AD D + D +D
Sbjct: 1967 EDEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTD 2013
Score = 33.5 bits (75), Expect = 1.6
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 19/113 (16%)
Query: 1399 DEEEDQEEEEQEEEDDDEDD--------DDTDDLDELDTDQLLEAEL---EEDDNNENAG 1447
+E D E E Q D +D D T D +T Q L+ +L + D +
Sbjct: 1874 EESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQSDQQTTTSS 1933
Query: 1448 EDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
+DG D+ + ++ E+ +DE+ E+ E D D+ D EDD
Sbjct: 1934 QDGQGK---GDDVIVIDSDDEEEDDDENDGEHEDYE-----EDEEDDDDDEDD 1978
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 53.9 bits (128), Expect = 1e-06
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLD---------ELDTDQLLEAELEEDDNNEN 1445
++D D +D ++ ++ DD DD++DD D ++ D ++++ +D ++++
Sbjct: 183 SDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDS 242
Query: 1446 AGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D +D S + ++ ++ E +D D+ D+ + DSSD+S+ DD
Sbjct: 243 EAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDD 297
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
+E D+ D E + DD E DD D E D ++++ DDN++++ +D +D
Sbjct: 146 SEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVP-DDNSDDSSDDNSDDS 204
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
S + + +++ ++ D D D+ ++ ++ DSSD+S+ DD
Sbjct: 205 SDDNSDDSDVPDDKSDDSDVPDDSSDDSDV---PDDSSDDSEAPDD 247
Score = 53.1 bits (126), Expect = 2e-06
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPS 1457
+D +D + + + +D D DD +DD D D D ++E +D ++++ D +D S +
Sbjct: 206 DDNSDDSDVPDDKSDDSDVPDDSSDDSDVPD-DSSDDSEAPDDSSDDSEAPDDSSDDSEA 264
Query: 1458 DEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
++ ++ E +D D+ +D+ + DSSD+S+ DD
Sbjct: 265 PDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDD 307
Score = 52.4 bits (124), Expect = 3e-06
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFS 1455
E D+ D E + DD E DD D E D ++E DDN++++ DN
Sbjct: 137 EVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAP-DDNSDDSDVPDDNSDD 195
Query: 1456 PSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
SD+ + ++ D D D ++ ++ DSSD+SD+ DD
Sbjct: 196 SSDDNSDDSSDDNSDDSDVPDDKSDDSDV---PDDSSDDSDVPDD 237
Score = 52.4 bits (124), Expect = 3e-06
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 1399 DEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSD 1458
D+ D + + DD E DD+ D E D ++E +D ++++ D +D S +
Sbjct: 226 DDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAS 285
Query: 1459 EELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
++ ++ E +D D+ D++ + D SD+SD+ DD
Sbjct: 286 DDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDD 327
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPS 1457
+D+ +D + + +D D DD +DD + D D ++E +D ++++ D +D S +
Sbjct: 216 DDKSDDSDVPDDSSDDSDVPDDSSDDSEAPD-DSSDDSEAPDDSSDDSEAPDDSSDDSEA 274
Query: 1458 DEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
++ ++ E +D D+ +D+ + D SD+SD+ +D
Sbjct: 275 PDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPED 317
Score = 51.2 bits (121), Expect = 7e-06
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 1397 DEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSP 1456
D+ E D ++ + DD+ DD D+ D+ D ++++ +D ++++ D +D S
Sbjct: 174 DDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSD 233
Query: 1457 SDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
++ ++ E +D D+ D+ + DSSD+S+ DD
Sbjct: 234 VPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDD 277
Score = 48.5 bits (114), Expect = 5e-05
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 1398 EDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGD-NDFSP 1456
+D +D E + +D D DD++DD + ++D + ++ D ++ +D D D S
Sbjct: 170 DDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSS 229
Query: 1457 SDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D ++ + + + D+ SD E + DSSD+S+ DD
Sbjct: 230 DDSDVPDDSSDDSEAPDDSSDDSEAPD------DSSDDSEAPDD 267
Score = 48.1 bits (113), Expect = 6e-05
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDD------DDTDDLDELDTDQLLEAELEEDDNNENAGE 1448
+E D+ D + + DD DD DD D ++ D+ ++++ +D ++++
Sbjct: 176 SEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVP 235
Query: 1449 DGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D +D S + ++ ++ E +D D+ D+ + DSSD+S+ DD
Sbjct: 236 DDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDD 287
Score = 45.4 bits (106), Expect = 4e-04
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
+E D+ D E + DD E DD+ D E D+ ++++ ED ++++ D ++D
Sbjct: 272 SEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDD 331
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
+L EG+ DE+ E + DSSD++ +D
Sbjct: 332 LEVPVPAEDLCNEGQIASDEEELV--EAAAAVSQHDSSDDAGEQD 374
Score = 44.7 bits (104), Expect = 7e-04
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
++D + +D ++ + +D+ +D D DD + +D DD++++ +D D
Sbjct: 163 SDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDD------NSDDSSDDNSDDSDVPD 216
Query: 1455 SPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
SD+ +++ ++ D D D+ ++ E DSSD+S+ DD
Sbjct: 217 DKSDD--SDVPDDSSDDSDVPDDSSDDSE---APDDSSDDSEAPDD 257
Score = 43.1 bits (100), Expect = 0.002
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 30/129 (23%)
Query: 1381 DTVCRLYEVGRQRLAEDEDEEEDQE---------EEEQEEEDDDEDDDDTDDLDELDTDQ 1431
D C +E + +L E ++E E E DDD DDD+ +DL+ D
Sbjct: 84 DEECHTHEEKKAKLLEINSDDESPECCHVKPAIQEPPIVISDDDNDDDNGNDLEVPD--- 140
Query: 1432 LLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDS 1491
+ D++E ++ D+ +P D + E D +DS+A + D+
Sbjct: 141 ------DNSDDSEAPDDNSDDSEAPDDNSDDS---EAPDDNSDDSEAPD---------DN 182
Query: 1492 SDNSDLEDD 1500
SD+SD+ DD
Sbjct: 183 SDDSDVPDD 191
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 1387 YEVGRQRLAEDEDEEEDQEEEEQEEE-DDDEDDDDTDDLDELDTDQLLEAELEEDDNNEN 1445
++V ++ LA +E+E E +++ D+DEDDDD +D DE D D+ ++DD +++
Sbjct: 313 FQVFKKLLAREEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDE------DDDDEDDD 366
Query: 1446 AGEDGDNDFSPSDEE 1460
ED D D +EE
Sbjct: 367 EAEDNDEDEDDDEEE 381
Score = 42.0 bits (97), Expect = 0.004
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 16/74 (21%)
Query: 1408 EQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEE 1467
E+EE + DD LDE +EDD++E ++ DND DE+ +E
Sbjct: 323 EEEESESSTSDDKRASLDE-----------DEDDDDEEDNDEDDNDEDDDDED----DDE 367
Query: 1468 GEDGEDEDSDADEE 1481
ED DED D DEE
Sbjct: 368 AED-NDEDEDDDEE 380
Score = 38.5 bits (88), Expect = 0.050
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 1446 AGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
A E+ +++ S SD++ A+L E+ +D ++ED+D D+ E D D D+ + ED+
Sbjct: 321 AREEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDE----DDDDEDDDEAEDN 371
Score = 33.1 bits (74), Expect = 2.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 1431 QLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTD 1490
+LL E EE +++ + + D D++ EE D +D D D D+E D +
Sbjct: 318 KLLAREEEESESSTSDDKRASLDEDEDDDD-----EEDNDEDDNDEDDDDE-----DDDE 367
Query: 1491 SSDNSDLEDD 1500
+ DN + EDD
Sbjct: 368 AEDNDEDEDD 377
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1396 EDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLL---EAELEEDDNNENAGEDGDN 1452
ED+D+EED+EEEE+EEEDDD+D +D D + L Q + ++ + D E A D
Sbjct: 146 EDDDDEEDEEEEEEEEEDDDDDTEDFADQENLPDPQDISCHQSPSKTDHLTEKAYSDTPR 205
Query: 1453 DFSPS 1457
DF S
Sbjct: 206 DFPDS 210
Score = 42.7 bits (99), Expect = 0.003
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 1397 DEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSP 1456
D EE+D+E+++ +E+DDDE+D++ ++ +E D D + E+ + EN + D
Sbjct: 132 DGGEEDDKEDDDDDEDDDDEEDEEEEEEEEEDDDD----DTEDFADQENLPDPQDISCHQ 187
Query: 1457 SDEELANLLEEGEDGEDED 1475
S + +L E+ D
Sbjct: 188 SPSKTDHLTEKAYSDTPRD 206
Score = 40.0 bits (92), Expect = 0.017
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 1383 VC-RLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAE 1436
VC + E G ED+ E++D +E++ +EED++E++++ +D D+ DT+ + E
Sbjct: 122 VCLEIMEPGGDGGEEDDKEDDDDDEDDDDEEDEEEEEEEEED-DDDDTEDFADQE 175
Score = 32.0 bits (71), Expect = 4.6
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 1440 DDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
D E+ ED D+D DEE EE E+ E+ED D D E D +D +L D
Sbjct: 132 DGGEEDDKEDDDDDEDDDDEED----EEEEEEEEEDDDDDTE--------DFADQENLPD 179
Query: 1500 DIILSLNE 1507
+S ++
Sbjct: 180 PQDISCHQ 187
>gi|42476169 Paf1, RNA polymerase II associated factor, homolog [Homo
sapiens]
Length = 531
Score = 53.1 bits (126), Expect = 2e-06
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1399 DEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSD 1458
+ E +EEEE+E E ++++ +D+ E + E +E +E+ E+GD D SD
Sbjct: 372 ENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRD-EASD 430
Query: 1459 EELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
+ + E E EDE A ++ E+ D DS D++D +D+
Sbjct: 431 KSGSG---EDESSEDEARAARDKEEIFGSDADSEDDADSDDE 469
Score = 33.9 bits (76), Expect = 1.2
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 1395 AEDEDEEEDQEEEEQEEEDDDED---DDDTDDLDELDTDQLLEAELEEDDNNENAGEDGD 1451
+E E E++ E E E+ D D D DE D+ A D E G D D
Sbjct: 404 SEKEGSEDEHSGSESEREEGDRDEASDKSGSGEDESSEDEARAAR----DKEEIFGSDAD 459
Query: 1452 N-DFSPSDEELANLLEEGEDGEDEDSDA 1478
+ D + SD+E + + G D DSD+
Sbjct: 460 SEDDADSDDEDRG---QAQGGSDNDSDS 484
Score = 33.5 bits (75), Expect = 1.6
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 1396 EDEDEEEDQEEEEQEEE--DDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDND 1453
EDE E++ +EE D D +D D D+ D Q + D+ N G
Sbjct: 436 EDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRS 495
Query: 1454 FS------PSDEELANLLEEGEDGEDEDSDADEE 1481
S PS E + + E + S+AD +
Sbjct: 496 HSRSASPFPSGSEHSAQEDGSEAAASDSSEADSD 529
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 52.8 bits (125), Expect = 3e-06
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED 1449
G ++ E EDEEE++EEEE +EE+++EDDD L EA+++++ +E+ ED
Sbjct: 35 GSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED 94
Query: 1450 GDNDFSPSDE-ELANL----LEEGEDG 1471
G D +E E +N+ L+E G
Sbjct: 95 GAEDILEKEEIEASNIDNVVLDEDRSG 121
Score = 47.4 bits (111), Expect = 1e-04
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 1388 EVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDD-------------LDELDTDQLLE 1434
E R +++EE + EEEE+EEE+ DE++++ DD LDE D D E
Sbjct: 28 EERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYE 87
Query: 1435 AELEEDDNNENAGEDGDNDFSPSD-----------EELANLLEEGEDGEDEDSDADEEVE 1483
E + +D E+ E + + S D L NL + + E + + +
Sbjct: 88 DEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAK 147
Query: 1484 LILGDTDSSDNSDLEDDI 1501
+G+T + +L DDI
Sbjct: 148 SSVGETVYGGSDELSDDI 165
Score = 37.0 bits (84), Expect = 0.14
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 1388 EVGRQRLAEDEDEEEDQE-------EEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED 1440
E +R ++ E+ E D+E E+E+E ED++E++++ ++ DE E EE+
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEE-EEYDE---------EEEEE 61
Query: 1441 DNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D++ + F + ++ + E+ + ED D E+ E+ + + DN L++D
Sbjct: 62 DDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEI---EASNIDNVVLDED 118
Score = 36.6 bits (83), Expect = 0.19
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 1394 LAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA----GED 1449
+++ ED +EE+ + D +E + D + +++ E E EE++ E E+
Sbjct: 1 MSDSEDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEE 60
Query: 1450 GDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLE----DDIIL 1503
D+D P + + D +DE D D+ + G D + ++E D+++L
Sbjct: 61 EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED---GAEDILEKEEIEASNIDNVVL 115
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 52.8 bits (125), Expect = 3e-06
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED 1449
G ++ E EDEEE++EEEE +EE+++EDDD L EA+++++ +E+ ED
Sbjct: 35 GSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED 94
Query: 1450 GDNDFSPSDE-ELANL----LEEGEDG 1471
G D +E E +N+ L+E G
Sbjct: 95 GAEDILEKEEIEASNIDNVVLDEDRSG 121
Score = 47.4 bits (111), Expect = 1e-04
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 1388 EVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDD-------------LDELDTDQLLE 1434
E R +++EE + EEEE+EEE+ DE++++ DD LDE D D E
Sbjct: 28 EERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYE 87
Query: 1435 AELEEDDNNENAGEDGDNDFSPSD-----------EELANLLEEGEDGEDEDSDADEEVE 1483
E + +D E+ E + + S D L NL + + E + + +
Sbjct: 88 DEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAK 147
Query: 1484 LILGDTDSSDNSDLEDDI 1501
+G+T + +L DDI
Sbjct: 148 SSVGETVYGGSDELSDDI 165
Score = 37.0 bits (84), Expect = 0.14
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 1388 EVGRQRLAEDEDEEEDQE-------EEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED 1440
E +R ++ E+ E D+E E+E+E ED++E++++ ++ DE E EE+
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEE-EEYDE---------EEEEE 61
Query: 1441 DNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D++ + F + ++ + E+ + ED D E+ E+ + + DN L++D
Sbjct: 62 DDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEI---EASNIDNVVLDED 118
Score = 36.6 bits (83), Expect = 0.19
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 1394 LAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA----GED 1449
+++ ED +EE+ + D +E + D + +++ E E EE++ E E+
Sbjct: 1 MSDSEDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEE 60
Query: 1450 GDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLE----DDIIL 1503
D+D P + + D +DE D D+ + G D + ++E D+++L
Sbjct: 61 EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED---GAEDILEKEEIEASNIDNVVL 115
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 52.8 bits (125), Expect = 3e-06
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 1390 GRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGED 1449
G ++ E EDEEE++EEEE +EE+++EDDD L EA+++++ +E+ ED
Sbjct: 35 GSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED 94
Query: 1450 GDNDFSPSDE-ELANL----LEEGEDG 1471
G D +E E +N+ L+E G
Sbjct: 95 GAEDILEKEEIEASNIDNVVLDEDRSG 121
Score = 47.4 bits (111), Expect = 1e-04
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 1388 EVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDD-------------LDELDTDQLLE 1434
E R +++EE + EEEE+EEE+ DE++++ DD LDE D D E
Sbjct: 28 EERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYE 87
Query: 1435 AELEEDDNNENAGEDGDNDFSPSD-----------EELANLLEEGEDGEDEDSDADEEVE 1483
E + +D E+ E + + S D L NL + + E + + +
Sbjct: 88 DEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAK 147
Query: 1484 LILGDTDSSDNSDLEDDI 1501
+G+T + +L DDI
Sbjct: 148 SSVGETVYGGSDELSDDI 165
Score = 37.0 bits (84), Expect = 0.14
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 1388 EVGRQRLAEDEDEEEDQE-------EEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED 1440
E +R ++ E+ E D+E E+E+E ED++E++++ ++ DE E EE+
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEE-EEYDE---------EEEEE 61
Query: 1441 DNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
D++ + F + ++ + E+ + ED D E+ E+ + + DN L++D
Sbjct: 62 DDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEI---EASNIDNVVLDED 118
Score = 36.6 bits (83), Expect = 0.19
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 1394 LAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA----GED 1449
+++ ED +EE+ + D +E + D + +++ E E EE++ E E+
Sbjct: 1 MSDSEDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEE 60
Query: 1450 GDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLE----DDIIL 1503
D+D P + + D +DE D D+ + G D + ++E D+++L
Sbjct: 61 EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWED---GAEDILEKEEIEASNIDNVVL 115
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 2 [Homo sapiens]
Length = 227
Score = 52.8 bits (125), Expect = 3e-06
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 16/120 (13%)
Query: 1397 DEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGD---ND 1453
D+++ E + EE+++ED DEDD++ ++ + + E E EE++ +E+ ED D ++
Sbjct: 108 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 167
Query: 1454 FSPSDEELA---NLLEEGEDGEDED---SDADEEVELILG-------DTDSSDNSDLEDD 1500
+EE+ + EE +D ED+D + +EE E G D+ D+ + EDD
Sbjct: 168 LGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 227
Score = 50.1 bits (118), Expect = 2e-05
Identities = 25/94 (26%), Positives = 57/94 (60%), Gaps = 9/94 (9%)
Query: 1388 EVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAG 1447
E G E+E+EEE++E+E+++E++D+ + + +E+ L++ E+++++++++
Sbjct: 136 EAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYV 195
Query: 1448 EDGDNDFSPSDEELANLLEE------GEDGEDED 1475
E+G+ + +EE L E +DGE+ED
Sbjct: 196 EEGEEE---EEEEEGGLRGEKRKRDAEDDGEEED 226
Score = 34.3 bits (77), Expect = 0.93
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 40/142 (28%)
Query: 1369 IENQGSMDALNMDTVC------RLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTD 1422
++N S+D N + ++E+ +Q D ++ED E + EEEDD++ D+D
Sbjct: 71 LKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDD- 129
Query: 1423 DLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEV 1482
EE++ NE AG EG + E+E+ + ++E
Sbjct: 130 ---------------EEEEENE-AGPP-----------------EGYEEEEEEEEEEDED 156
Query: 1483 ELILGDTDSSDNSDLEDDIILS 1504
E D S+ + E+++ LS
Sbjct: 157 EDEDEDEAGSELGEGEEEVGLS 178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,385,173
Number of Sequences: 37866
Number of extensions: 2994723
Number of successful extensions: 49524
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 373
Number of HSP's that attempted gapping in prelim test: 24247
Number of HSP's gapped (non-prelim): 11011
length of query: 1507
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1392
effective length of database: 13,892,928
effective search space: 19338955776
effective search space used: 19338955776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.