Guide to the Human Genome
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Name: UBL4A Sequence: fasta or formatted (157aa) NCBI GI: 7657667
Description:

ubiquitin-like 4

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         10           2
 C cysteine            0.6          1           1
 D aspartate           5.1          8           2
 E glutamate           8.9         14           2
 F phenylalanine       2.5          4           1
 G glycine             3.8          6           1
 H histidine           1.3          2           1
 I isoleucine          1.9          3           1
 K lysine              7.6         12           1
 L leucine            16.6         26           2
 M methionine          1.3          2           1
 N asparagine          1.9          3           1
 P proline             5.1          8           3
 Q glutamine           7.0         11           2
 R arginine            7.6         12           1
 S serine              8.9         14           1
 T threonine           3.2          5           1
 V valine              8.3         13           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-like 4 
UBL4B                 0.363   ubiquitin-like 4B 
UBB                   0.137   ubiquitin B precursor 
RPS27A                0.137   ubiquitin and ribosomal protein S27a precursor [Hom...
RPS27A                0.137   ubiquitin and ribosomal protein S27a precursor 
UBC                   0.137   ubiquitin C 
UBA52                 0.137   ubiquitin and ribosomal protein L40 precursor 
UBA52                 0.137   ubiquitin and ribosomal protein L40 precursor 
LOC100128355          0.112   PREDICTED: similar to hCG1790904 
LOC100128355          0.112   PREDICTED: similar to hCG1790904 
LOC100128355          0.112   PREDICTED: similar to hCG1790904 
NEDD8                 0.104   neural precursor cell expressed, developmentally down...
MIDN                  0.086   midnolin 
ISG15                 0.065   ISG15 ubiquitin-like modifier 
UHRF2                 0.061   ubiquitin-like with PHD and ring finger domains 2 [H...
RAD23B                0.058   UV excision repair protein RAD23 homolog B 
BAT3                  0.058   HLA-B associated transcript-3 isoform b 
BAT3                  0.058   HLA-B associated transcript-3 isoform b 
BAT3                  0.058   HLA-B associated transcript-3 isoform b 
BAT3                  0.058   HLA-B associated transcript-3 isoform a 
RAD23A                0.050   UV excision repair protein RAD23 homolog A 
UBQLN1                0.050   ubiquilin 1 isoform 2 
UBQLN1                0.050   ubiquilin 1 isoform 1 
UHRF1                 0.047   ubiquitin-like with PHD and ring finger domains 1 i...
UHRF1                 0.047   ubiquitin-like with PHD and ring finger domains 1 i...
UBQLN2                0.040   ubiquilin 2 
PARK2                 0.036   parkin isoform 2 
PARK2                 0.036   parkin isoform 1 
UBQLN4                0.036   ataxin-1 ubiquitin-like interacting protein 
BAG1                  0.036   BCL2-associated athanogene isoform 1L 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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