Guide to the Human Genome
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Name: BAG1 Sequence: fasta or formatted (345aa) NCBI GI: 124494251
Description:

BCL2-associated athanogene isoform 1L

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         26           3
 C cysteine            1.2          4           1
 D aspartate           3.5         12           1
 E glutamate          13.3         46           2
 F phenylalanine       2.0          7           1
 G glycine             6.1         21           2
 H histidine           1.4          5           1
 I isoleucine          3.2         11           1
 K lysine              7.2         25           3
 L leucine             9.3         32           1
 M methionine          2.0          7           1
 N asparagine          2.0          7           1
 P proline             5.2         18           3
 Q glutamine           6.7         23           2
 R arginine            9.9         34           3
 S serine              7.2         25           2
 T threonine           6.7         23           1
 V valine              5.2         18           2
 W tryptophan          0.3          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated athanogene isoform 1L 
PLEC1                 0.037   plectin 1 isoform 11 
PLEC1                 0.037   plectin 1 isoform 10 
PLEC1                 0.037   plectin 1 isoform 8 
PLEC1                 0.037   plectin 1 isoform 7 
PLEC1                 0.037   plectin 1 isoform 6 
PLEC1                 0.037   plectin 1 isoform 3 
PLEC1                 0.037   plectin 1 isoform 2 
PLEC1                 0.037   plectin 1 isoform 1 
DEF6                  0.031   differentially expressed in FDCP 6 homolog 
AKAP9                 0.031   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.031   A-kinase anchor protein 9 isoform 3 
GOLGB1                0.031   golgi autoantigen, golgin subfamily b, macrogolgin ...
PDCD7                 0.031   programmed cell death 7 
MICAL3                0.029   microtubule associated monoxygenase, calponin and L...
PPFIA3                0.029   PTPRF interacting protein alpha 3 
ERC1                  0.028   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.028   RAB6-interacting protein 2 isoform delta 
LOC100132799          0.028   PREDICTED: hypothetical protein 
MYH7B                 0.028   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
PPFIA1                0.028   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.028   PTPRF interacting protein alpha 1 isoform b 
SRRM2                 0.028   splicing coactivator subunit SRm300 
LOC727832             0.026   golgi autoantigen, golgin subfamily a-like 
C1orf113              0.026   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.026   SH3 domain-containing protein C1orf113 isoform 2 [H...
SFRS11                0.026   splicing factor, arginine/serine-rich 11 
CDC2L2                0.026   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.026   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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