RPS27A 12235

Name: RPS27A	Sequence: fasta or formatted (156aa)		NCBI GI: 208022622
Description: ubiquitin and ribosomal protein S27a precursor		Referenced in: Ribosomes Ubiquitin and Related Protein Modifications
Other entries for this name: alt mRNA [156aa] ubiquitin and ribosomal protein S27a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.8 6 1 C cysteine 3.8 6 2 D aspartate 5.8 9 1 E glutamate 6.4 10 1 F phenylalanine 3.2 5 1 G glycine 6.4 10 2 H histidine 2.6 4 1 I isoleucine 5.1 8 1 K lysine 16.0 25 3 L leucine 8.3 13 1 M methionine 1.3 2 1 N asparagine 3.2 5 1 P proline 3.8 6 2 Q glutamine 3.8 6 2 R arginine 6.4 10 2 S serine 4.5 7 1 T threonine 6.4 10 2 V valine 5.1 8 1 W tryptophan 0.0 0 0 Y tyrosine 3.8 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 1.000 ubiquitin and ribosomal protein S27a precursor LOC100128355 0.564 PREDICTED: similar to hCG1790904 LOC100128355 0.564 PREDICTED: similar to hCG1790904 LOC100128355 0.564 PREDICTED: similar to hCG1790904 UBB 0.423 ubiquitin B precursor UBC 0.423 ubiquitin C UBA52 0.423 ubiquitin and ribosomal protein L40 precursor UBA52 0.423 ubiquitin and ribosomal protein L40 precursor NEDD8 0.242 neural precursor cell expressed, developmentally down... ANUBL1 0.158 AN1, ubiquitin-like, homolog ANUBL1 0.158 AN1, ubiquitin-like, homolog UBL4A 0.128 ubiquitin-like 4 FAU 0.101 ubiquitin-like protein fubi and ribosomal protein S30... ISG15 0.097 ISG15 ubiquitin-like modifier RAD23B 0.091 UV excision repair protein RAD23 homolog B SF3A1 0.091 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... SF3A1 0.091 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... UHRF1 0.087 ubiquitin-like with PHD and ring finger domains 1 i... UHRF1 0.087 ubiquitin-like with PHD and ring finger domains 1 i... OASL 0.087 2'-5'-oligoadenylate synthetase-like isoform a [Homo... PARK2 0.084 parkin isoform 2 PARK2 0.084 parkin isoform 1 UBD 0.084 ubiquitin D UBL4B 0.084 ubiquitin-like 4B UHRF2 0.081 ubiquitin-like with PHD and ring finger domains 2 [H... UBTD1 0.077 ubiquitin domain containing 1 BAT3 0.074 HLA-B associated transcript-3 isoform b BAT3 0.074 HLA-B associated transcript-3 isoform b BAT3 0.074 HLA-B associated transcript-3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.