Guide to the Human Genome
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Name: SH3BP4 Sequence: fasta or formatted (963aa) NCBI GI: 7657562
Description:

SH3-domain binding protein 4

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         53           3
 C cysteine            1.8         17           1
 D aspartate           5.4         52           2
 E glutamate           5.5         53           2
 F phenylalanine       4.0         39           2
 G glycine             5.4         52           2
 H histidine           2.0         19           1
 I isoleucine          3.8         37           2
 K lysine              6.5         63           2
 L leucine            11.1        107           3
 M methionine          1.7         16           1
 N asparagine          4.8         46           2
 P proline             6.3         61           3
 Q glutamine           4.4         42           2
 R arginine            4.6         44           2
 S serine              9.2         89           3
 T threonine           6.0         58           3
 V valine              7.8         75           2
 W tryptophan          1.6         15           2
 Y tyrosine            2.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain binding protein 4 
MACC1                 0.320   putative binding protein 7a5 
SRC                   0.015   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.015   proto-oncogene tyrosine-protein kinase SRC 
BTK                   0.015   Bruton agammaglobulinemia tyrosine kinase 
FYN                   0.013   protein-tyrosine kinase fyn isoform c 
FYN                   0.013   protein-tyrosine kinase fyn isoform b 
FYN                   0.013   protein-tyrosine kinase fyn isoform a 
HCK                   0.011   hemopoietic cell kinase isoform p61HCK 
YES1                  0.011   viral oncogene yes-1 homolog 1 
PRMT2                 0.011   HMT1 hnRNP methyltransferase-like 1 
PRMT2                 0.011   HMT1 hnRNP methyltransferase-like 1 
FGR                   0.009   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.009   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.009   proto-oncogene tyrosine-protein kinase FGR 
SPTAN1                0.009   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.009   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
ITSN2                 0.009   intersectin 2 isoform 3 
ITSN2                 0.009   intersectin 2 isoform 1 
ITSN2                 0.009   intersectin 2 isoform 2 
LCK                   0.009   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.009   lymphocyte-specific protein tyrosine kinase precurs...
NCF1                  0.009   neutrophil cytosolic factor 1 
GRB2                  0.008   growth factor receptor-bound protein 2 isoform 1 [Hom...
ABL1                  0.008   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.008   c-abl oncogene 1, receptor tyrosine kinase isoform b...
GRB2                  0.008   growth factor receptor-bound protein 2 isoform 2 [Ho...
NCK2                  0.008   NCK adaptor protein 2 isoform B 
NCK2                  0.008   NCK adaptor protein 2 isoform A 
NCK2                  0.008   NCK adaptor protein 2 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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