Guide to the Human Genome
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Name: MACC1 Sequence: fasta or formatted (852aa) NCBI GI: 157502191
Description:

putative binding protein 7a5

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         45           2
 C cysteine            1.6         14           1
 D aspartate           5.5         47           2
 E glutamate           6.6         56           2
 F phenylalanine       3.6         31           1
 G glycine             4.8         41           2
 H histidine           2.9         25           1
 I isoleucine          5.4         46           1
 K lysine              7.5         64           2
 L leucine            11.9        101           3
 M methionine          2.3         20           2
 N asparagine          4.5         38           2
 P proline             4.1         35           2
 Q glutamine           5.3         45           2
 R arginine            3.8         32           1
 S serine              7.6         65           2
 T threonine           4.9         42           2
 V valine              7.9         67           2
 W tryptophan          1.5         13           1
 Y tyrosine            2.9         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   putative binding protein 7a5 
SH3BP4                0.364   SH3-domain binding protein 4 
SPTAN1                0.006   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.006   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
UNC5CL                0.006   unc-5 homolog C-like 
DES                   0.004   desmin 
MYH10                 0.004   myosin, heavy polypeptide 10, non-muscle 
RUFY2                 0.004   RUN and FYVE domain-containing 2 isoform a 
TFDP1                 0.004   transcription factor Dp-1 
NINL                  0.003   ninein-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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